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Emergence of seasonal influenza viruses type A/H1N1 with oseltamivir resistance in some European Countries at the start of the 2007-8 influenza

Re: :::Emergence of seasonal influenza viruses type A/H1N1 with:::

Re: :::Emergence of seasonal influenza viruses type A/H1N1 with:::

Commentary http://www.recombinomics.com/feed.xml

H1N1 Tamiflu Resistance in the United States in 2007

Recombinomics Commentary 03:11
January 29, 2008

The European Centres for Disease Control said that while Tamiflu could still provide benefits, 13 per cent of samples of the H1N1 seasonal flu virus affecting Europe tested last November and December ? most in Norway ? contained a mutation associated with high levels of resistance.

The above comments describe the appearance of the oseltamivir resistance marker, H274Y, in recent H1N1 isolates in Europe.

However, a search of public sequences identifies H274Y suddenly appearing in 2007 H1N1 isolates from the United States (see list below. The number of complete human influenza sequences has grown steadily, largely because of the NIAID influenza sequencing project. At the Los Alamos sequence database, there are 1030 N1 sequences from H1N1 human isolates. 340 are from 2007 and all of the sequences below are from 2007. Thus, although the percentage of samples was low, all were from 2007 and all were Solomon Island-like.

These Solomon-Island lake sequences trace back to Asia, where Tamiflu blankets are frequently applied in the treatment of H5N1. The N1 in H5N1 has donor sequences for human N1 in the region adjacent to the acquisition which generates H274Y, which is the precise change found in the most common form of oseltamivir resistance in H5N1 patients, primarily in Vietnam.

In 2005 a milder version of H5N1 emerged in northern Vietnam. However, initial data supporting widespread mild infections of H5N1 were denied, even after initial results were independently confirmed.

Testing continued until negatives were achieved. The possibility of widespread H5N1 in people in Vietnam was largely discounted and use of Tamiflu in contacts of suspect patients was common.

Now Tamiflu chickens may be coming home to roost.

ISDN282211 A/Hawaii/21/2007 H1N1
ISDN282224 A/Hawaii/28/2007 H1N1
ISDN282222 A/Hawaii/28/2007 H1N1
CY027037 A/Kansas/UR06-0104/2007 H1N1
ISDN282240 A/Minnesota/23/2007 H1N1
ISDN263890 A/Texas/31/2007 H1N1


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Re: :::Emergence of seasonal influenza viruses type A/H1N1 with:::

Re: :::Emergence of seasonal influenza viruses type A/H1N1 with:::

Commentary

H5N1 Tamiflu Blankets and Resistance in European H1N1

Recombinomics Commentary 16:58
January 29, 2008

Influenza experts admitted today that they have been startled by the discovery this season of an unexpectedly high number of human flu viruses that appear to be naturally resistant to Tamiflu, the drug that countries around the world are stockpiling for use in the next flu pandemic.

The viruses have been isolated from people infected with influenza A viruses of the H1N1 subtype in a number of European countries.

The World Health Organization is convening a virtual meeting of experts tomorrow to try to get a handle on how far afield the resistant virus has been found, how common it is and what the findings signify.

"I think this is a very concerning change in influenza virus resistance patterns," Dr. Frederick Hayden, a leading antiviral expert and a member of the WHO's Global Influenza Program, said from Geneva.

The above comments express surprise and concern regarding the sudden appearance of oseltamivir (Tamiflu) resistance in H1N1 seasonal flu, and fail to draw the connection between this dramatic change and the widespread use of Tamiflu blankets to treat H5N1. The change in the human N1 in H1N1 is identical to the avian/human N1 change in H5N1. Both N1’s have created H294Y via the identical nucleotide change, C763T. Although this change has been found in H5N1 patients in Vietnam and Indonesia treated with Tamiflu, it has also been found avian isolates, including mute swans in Astrakhan in 2005 (A/swan/Astrakhan/Russia/Nov-2/2005(H5N1) and A/swan/Astrakhan/1/2005(H5N1)) .

Question of fitness have been raised previously, but the presence of H294Y in wild birds flying around Europe as early as 2005 indicates the change does not carry a significant fitness penalty. Moreover, H294Y was found as early as 2002 in a chicken in Hong Kong, A/chicken/Hong Kong/3123.1/2002(H5N1).

H294Y can move from the N1 in H5N1 to the N1 in H1N1 via recombination. The opportunity for co-infections involving seasonal and pandemic influenza can be found in patients with mild H5N1 infections.

Such infections were suspect in 2005 in northern Vietnam. In contrast to outbreaks in 2004, the case fatality rates of H5N1 in northern and southern Vietnam were dramatically different in early 2005. In the north the clusters were larger and the infections were milder, suggesting H5N1 in humans was becoming more common, and transmitting more efficiently. Almost 1000 samples were collected for analysis. H5N1 was detected locally, so samples were sent to the CDC in Atlanta for confirmation. Positives were also seen in Atlanta, so samples were repeatedly tested until they turned negative. However, the lab results had little effect of the H5N1 in circulation, which was commonly treated with Tamiflu.

This treatment would select for human H1N1 or avian H5N1 with H294Y. This change began to appear in the United States in 2007. The isolates with H294Y were Solomon Island-like, which link back to Asia. Similarly, H5N1 outbreaks in the Middle East were also treated with Tamiflu. In Egypt, a scenario similarly to Vietnam developed in 2007. Early cases in the north were largely fatal, but outbreaks in southern Egypt were mild, again allowing for more efficient spread and co-infections with H1N1 seasonal flu. These co-infections would again create conditions for the movement of H294Y from H5N1 to H1N1 in areas where Tamiflu was used excessively.

Thus, the appearance of H294Y began in 2007 and now is becoming increasingly common in human H1N1 in 2008.

This increasing frequency of Tamiflu resistance in seasonal H1N1 is cause for concern, as is the potential for additional expansion in H5N1.


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Re: :::Emergence of seasonal influenza viruses type A/H1N1 with:::

Re: :::Emergence of seasonal influenza viruses type A/H1N1 with:::

From Reveres EM:
http://scienceblogs.com/effectmeasure/2008/01/tamiflu_resistance_in_seasonal.php

<FORM class=blogSearch action=http://scienceblogs.com/effectmeasure/fastsearch method=get></FORM>Tamiflu resistance in seasonal flu: the devil is in the details


"... The NA protein comes in 9 different forms. Humans are routinely infected with the N1 and N2 forms, and these aren't the same with respect to Tamiflu. The drugs were designed to work against the N2 form, which was the one where we had x-ray crystallography structures. Recently the N1 form was crystalized, permitting an investigation of the differences in how they react to these drugs. For Tamiflu to interfere with NA action it needs to nestle into a pocket. NA can change shape and for Tamiflu, but not Relenza, to work it needs to nestle into a pocket that forms during that shape change. It is thought the H274Y mutation causes Tamiflu resistance by preventing the formation of the pocket (the binding of Tamiflu is produced by rotating an amino acid near position 274 and its binding to another amino acid at position 224; it's complicated. See Moscona's Perspective in the New England Journal for more explanation). ..."
 
Re: :::Emergence of seasonal influenza viruses type A/H1N1 with:::

Re: :::Emergence of seasonal influenza viruses type A/H1N1 with:::

From Reveres EM:
http://scienceblogs.com/effectmeasure/2008/01/tamiflu_resistance_in_seasonal.php

<FORM class=blogSearch action=http://scienceblogs.com/effectmeasure/fastsearch method=get></FORM>Tamiflu resistance in seasonal flu: the devil is in the details


"... The NA protein comes in 9 different forms. Humans are routinely infected with the N1 and N2 forms, and these aren't the same with respect to Tamiflu. The drugs were designed to work against the N2 form, which was the one where we had x-ray crystallography structures. Recently the N1 form was crystalized, permitting an investigation of the differences in how they react to these drugs. For Tamiflu to interfere with NA action it needs to nestle into a pocket. NA can change shape and for Tamiflu, but not Relenza, to work it needs to nestle into a pocket that forms during that shape change. It is thought the H274Y mutation causes Tamiflu resistance by preventing the formation of the pocket (the binding of Tamiflu is produced by rotating an amino acid near position 274 and its binding to another amino acid at position 224; it's complicated. See Moscona's Perspective in the New England Journal for more explanation). ..."
This is old news and there is no devil in the detail. H274Y knocks down the efficiency of Tamiflu by 500-1000X, and Tamiflu effectiveness is borderline for N1, without the resistance.
 
Re: :::Emergence of seasonal influenza viruses type A/H1N1 with:::

Re: :::Emergence of seasonal influenza viruses type A/H1N1 with:::

Thank you Dr. Niman.

From bad to worst.

P.S.
The EM news pasus intention was to additionaly auto-respond to an myself previously posed question (in a case anybody watching this thread was thinking also that Tamiflu can contrasted all NA's):
":confused: I always (wrongly?) think that the Tamiflu potential of usage is on ALL kind of flu virus strains.""
with the cited excerpts from one EM post:
"... Humans are routinely infected with the N1 and N2 forms.
... Tamiflu. The drugs were designed to work against the N2 form, which was the one where we had x-ray crystallography structures.
... For Tamiflu to interfere with NA action it needs to nestle into a pocket.
... It is thought the H274Y mutation causes Tamiflu resistance by preventing the formation of the pocket, etc ..."
 
Re: :::Emergence of seasonal influenza viruses type A/H1N1 with:::

Re: :::Emergence of seasonal influenza viruses type A/H1N1 with:::

Tamiflu-resistant flu viruses found in Canada

Updated Wed. Jan. 30 2008 8:19 AM ET
The Canadian Press

<!-- dateline -->TORONTO <!-- /dateline -->-- Canada's National Microbiology Laboratory is reporting a high level of Tamiflu resistance among H1N1 viruses circulating so far this flu season in this country, one of a number of labs to see a phenomenon that is unsettling influenza experts. <!-- CPPara1End--><!-- CPPara2-->Nearly 10 per cent of H1N1 viruses tested so far this year by the Winnipeg lab are resistant to the drug, a cornerstone of pandemic planning for many countries around the globe. In the past, fewer than one per cent of circulating human flu viruses were thought to be resistant to Tamiflu. <!-- CPPara2End-->
<!-- CPPara3-->"That's quite a surprise," the lab's scientific director, Dr. Frank Plummer, said, noting the resistance mutation spotted in the Winnipeg testing is the same one that has been reported over the past few days from Norway, several other European countries and the United States. <!-- CPPara3End-->
Eight of 81 H1N1 viruses tested carry the H274Y mutation - one each from British Columbia and Newfoundland and Labrador, and six from Ontario. Plummer said that total includes one virus (from British Columbia) recovered from a child who is believed to have been infected in Sudan.
His surprise is shared by experts with the World Health Organization's Global Influenza Program, which convened a teleconference of about 50 scientists from leading influenza laboratories around the world Tuesday to try to get a handle on how far this virus has spread, how common it is in places where it is being found and what is driving the spread.
Dr. Frederick Hayden, a leading antiviral expert working at the WHO, said the resistance virus has been reported over a broad geographic range, both in terms of countries and within countries themselves.
"We do know that again within the countries that have the information, it's not just focal pockets. There are multiple sites, for example, within France or within Norway where this has been detected," he said from Geneva.
The United States has reported that 5.5 per cent of tested H1N1 viruses there are resistant to the drug. European countries known to have found resistant viruses include Norway, Denmark, France and the United Kingdom. Hayden suggested more countries have found these viruses, but said he wasn't at liberty to name names.
Perplexingly, Japan - the country that uses more Tamiflu by far than any other in the world - has not found any of these resistant viruses this flu season, Hayden said.
Reports worldwide still number in the "few dozens." But that is enough to send up red flags, especially given that in all of the cases where details are known, people who caught the virus hadn't taken Tamiflu.
It wouldn't be startling to see people who've used the drug shedding viruses that are resistant to it. Like antibiotic resistance, resistance to antiviral drugs can develop in people who use them, though rates of drug-triggered resistance are low with Tamiflu.
But it had been thought that viruses that acquired this H274Y resistance mutation would pay for that gain with a corresponding loss in their ability to transmit. The belief was that if they developed in someone using Tamiflu, they would be unlikely to infect contacts of that person and start to circulate more widely - in essence, that they would be too weak to compete with regular flu viruses in the race to infect human respiratory tracts.
These recent findings suggest the drug is more vulnerable to the development of drug resistance than had been previously thought, experts fear.
"This mutation is not going to affect the fitness of the viruses as much as we thought," said Jennifer McKimm-Breschkin, a virologist with Australia's Commonwealth Science and Industrial Research Organization in Melbourne.
McKimm-Breschkin was one of the scientists involved in the discovery of Tamiflu's competitor, Relenza. Though the two drugs are in the same class, Relenza is still effective against viruses with the H274Y mutation.
"We're now seeing the ability of this virus that we thought would not have the ability to compete (with unmutated viruses) spreading globally," she said, suggesting that doesn't bode well if H5N1 avian flu starts a pandemic. The same mutation creates Tamiflu resistance in H5N1 viruses.
Hayden said the appearance of resistant H1N1 viruses across such a broad expanse "does raise a lot of questions."
Dr. Joe Bresee, chief of flu epidemiology and prevention at the U.S. Centers for Disease Control, questioned Monday whether there was a true rise in the number of resistant viruses.
Bresee cautioned that increased influenza surveillance prompted by concerns over the H5N1 virus may be turning a spotlight on something that always existed but went unnoticed in the past.
Hayden disagreed, saying an international network of antiviral experts has been watching for this resistance pattern but it has only been found rarely.
"Basically it was present at very low frequencies, less than a half per cent. In most studies, (it was) not even detected. So I think this is a new phenomenon and one that we need to understand better."
He said work is already underway to try to catalogue cases and to sequence resistant viruses to see if their genomes hold clues to how the resistance arose.

http://www.ctv.ca/servlet/ArticleNe...30/tamiflu_viruses_080130/20080130?hub=Canada
 
Re: :::Emergence of seasonal influenza viruses type A/H1N1 with:::

Re: :::Emergence of seasonal influenza viruses type A/H1N1 with:::

Just a short update and a question.

The use of Tamiflu in Norway is uncommon. Why do we see such high numbers of the mutation here?

70% (26 out of 37 ) viruses from different patients and from different parts of Norway have the mutation. (High level of resistance against Tamiflu)

This according to the latest update from The Norwegian Institute of Public Health(Folkehelsa)
(link)
http://fhi.no/eway/default.aspx?pid...:0:0&MainLeft_5588=5544:67376::1:5569:1:::0:0
 
Re: :::Emergence of seasonal influenza viruses type A/H1N1 with:::

Re: :::Emergence of seasonal influenza viruses type A/H1N1 with:::

the virus probably came from outside Norway.
Much (most?) flu is reintroduced each winter from the tropes.

It is unclear, whether some flu also "oversummers".

So the mutation may have been created elsewhere
and the virus reached Norway by airplane or ship.

Just bad luck, that they have so many resistant viruses this year.
 
Re: :::Emergence of seasonal influenza viruses type A/H1N1 with:::

Re: :::Emergence of seasonal influenza viruses type A/H1N1 with:::

most Tamiflu is used in Japan
number of reported H1-seasonal flu samples:

2007,40,Japan,5
2007,41,Japan,10
2007,42,Japan,22
2007,43,Japan,22
2007,44,Japan,23
2007,45,Japan,46
2007,46,Japan,71
2007,47,Japan,58
2007,48,Japan,128
2007,49,Japan,145
2007,50,Japan,230
2007,51,Japan,163
2007,52,Japan,62
2008,01,Japan,14
2008,02,Japan,55
2008,03,Japan,13

so, the peak was in week 50.
Could those cases be linked to Japan travellers ?
 
Re: :::Emergence of seasonal influenza viruses type A/H1N1 with:::

Re: :::Emergence of seasonal influenza viruses type A/H1N1 with:::

most Tamiflu is used in Japan
number of reported H1-seasonal flu samples:

2007,40,Japan,5
2007,41,Japan,10
2007,42,Japan,22
2007,43,Japan,22
2007,44,Japan,23
2007,45,Japan,46
2007,46,Japan,71
2007,47,Japan,58
2007,48,Japan,128
2007,49,Japan,145
2007,50,Japan,230
2007,51,Japan,163
2007,52,Japan,62
2008,01,Japan,14
2008,02,Japan,55
2008,03,Japan,13

so, the peak was in week 50.
Could those cases be linked to Japan travellers ?
What does this have to do with this thread? Didn't the report say that H274Y was NOT found in Japan? The whole point is that H274Y is NOT in patients receiving Tamiflu.
 
Re: :::Emergence of seasonal influenza viruses type A/H1N1 with:::

Re: :::Emergence of seasonal influenza viruses type A/H1N1 with:::

how can we know ?
Only a small fraction of people are tested.
 
Re: :::Emergence of seasonal influenza viruses type A/H1N1 with:::

Re: :::Emergence of seasonal influenza viruses type A/H1N1 with:::

Commentary http://www.recombinomics.com/feed.xml http://www.newsnow.co.uk/nn/Recombinomics

Widespread Tamiflu Resistance in Human H1N1 Matches H5N1


Recombinomics Commentary 14:24
January 30, 2008

"That's quite a surprise," the lab's scientific director, Dr. Frank Plummer, said, noting the resistance mutation spotted in the Winnipeg testing is the same one that has been reported over the past few days from Norway, several other European countries and the United States.

Eight of 81 H1N1 viruses tested carry the H274Y mutation - one each from British Columbia and Newfoundland and Labrador, and six from Ontario. Plummer said that total includes one virus (from British Columbia) recovered from a child who is believed to have been infected in Sudan.

His surprise is shared by experts with the World Health Organization's Global Influenza Program, which convened a teleconference of about 50 scientists from leading influenza laboratories around the world Tuesday to try to get a handle on how far this virus has spread, how common it is in places where it is being found and what is driving the spread.

The above comments provide additional detail on the frequency of H1N1 seasonal flu with Tamiflu resistance marker, H274Y. In public sequences at Los Alamos, the change suddenly appeared in 2007 at multiple locations in the United States. The above comments suggest the frequency has grown this season and the polymorphism is widespread in Europe and North America.

In the United States the change was in the Solomon Islands variant, which links back to Asia, where the identical change has been seen in H5N1 from patients treated with Tamiflu, as well as birds, including wild birds in Astrakhan in 2005.

Like the wild birds, most of the recent human isolates are from hosts that have not been treated with oseltamivir. The widespread appearance of H274Y in such hosts indicates the change does not create a selective disadvantage, and is analogous to the sudden appearance of another NA polymorphism in N1, which is G743A in various genetic backgrounds of clade 2.2 H5N1. That change is silent and doesn?t offer an obvious selective advantage, yet it was appended onto at least eleven different genetic backgrounds in 2007.

These polymorphism are appended via recombination, and the widespread use of a Tamiflu blanket provides a selective environment for the acquisition of H274Y in human H1N1 co-infected with H5N1 patients.

Evidence is accumulating for mild human cases of mild H5N1, which are largely going undetected. A recent study of patients in Cambodia identified H5N1 antibodies in patients who were asymptomatic. Similarly H5N1 was isolated from patients with mild infections in Egypt. These cases did not develop pneumonia, and similar cases would likely be mistaken for seasonal flu, and H5N1 testing would not be done.

The sudden appearance of H274Y in seasonal H1N1 after Tamiflu blankets had been applied extensively in recent preceding years is not a coincidence.


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Re: :::Emergence of seasonal influenza viruses type A/H1N1 with:::

Re: :::Emergence of seasonal influenza viruses type A/H1N1 with:::

Mutant Flu Virus Is Found That Resists Popular Drug




By LAWRENCE K. ALTMAN
Published: January 31, 2008
<nyt_text> </nyt_text>A small but significant percentage of the main influenza virus causing illness this winter in Europe, Canada and the United States has a mutation that makes it resistant to the anti-influenza drug Tamiflu, the World Health Organization said Wednesday.
Scientists said they were surprised by the finding because they had believed that mutations of this type generally made the virus less potent and less easily spread among people. The predominant influenza virus circulating this winter is influenza A/H1N1. The Tamiflu-resistant form of the virus, known as influenza A(H1N1 H274Y), has been found with varying frequency in various areas of four European countries, Canada and the United States.
There are no immediate plans to recommend changes in the use of Tamiflu, which is also known as oseltamivir, officials from the W.H.O. and the United States said in interviews, because the incidence of the mutant virus is still small. Tamiflu is one of the antiviral drugs used to treat influenza in its early stages.
Nevertheless, officials from the W.H.O., a United Nations agency in Geneva, said they were troubled by the discovery.
“Clearly, this is of global concern, but it is not a global problem now,” Dr. Frederick G. Hayden, an influenza expert at the organization, said in a telephone interview.
The standard influenza vaccine still protects against the mutant virus, said Dr. Hayden and Dr. Alicia Fry, an influenza epidemiologist at the Centers for Disease Control and Prevention in Atlanta.
Norwegian epidemiologists first called attention to the problem last week when they reported that the mutation was present in 12 of 16, or 75 percent, of viruses isolated in that country from patients in the earliest part of the influenza season, in November and December.
The Norwegian rate was the highest among the four European countries — Britain, Denmark, France and Norway — that reported the mutant virus. There was no evidence that the 12 cases in Norway were linked to one another.
Over all, the mutant form was found in 19 of the viruses isolated from 148 patients or 13 percent, in a monitoring system that the European Center for Disease Prevention and Control runs in 10 European countries.
The overall percentage fell to 5 if Norway was excluded.
In the United States, the Tamiflu resistant strain was found in 9 of 237, or 3.8 percent of patients from whom influenza type A and B viruses were isolated this winter, and all 9 were in the A(H1N1) category, making them 6.7 percent of those 135 cases, Dr. Fry, said in a telephone interview.
The W.H.O. conducted a teleconference lasting two hours on Tuesday to collect information from experts in a number of countries. The participants agreed that continued close monitoring was needed to collect information on a larger number of patients to determine the frequency, transmission and distribution of the mutant strain as well as its virulence, Dr. Hayden said.
Scientists also want to learn how the resistance developed. It is unlikely to have been from use of Tamiflu, Dr. Hayden said, in part because no cases have been detected in Japan, where the drug is often used in treatment.



http://www.nytimes.com/2008/01/31/h...bbc5a393a144ee&ei=5088&partner=rssnyt&emc=rss
 
Re: :::Emergence of seasonal influenza viruses type A/H1N1 with:::

Re: :::Emergence of seasonal influenza viruses type A/H1N1 with:::

Yes, the lack of H274Y in Japan os one reason why the "experts" were "startled".
The misguided concept of "randon mutaions" remain hazardous to the world's health as evidenced by the Tamiflu blanket "experiment.
 
Re: :::Emergence of seasonal influenza viruses type A/H1N1 with:::

Re: :::Emergence of seasonal influenza viruses type A/H1N1 with:::

well, I don't know how much they tested in Japan the last weeks.
The mutation must have started somewhere.
Or maybe there are multiple appearances because the weather
is H274Y -friendly this year or such.
The Hawaii-sequences are instructive, Hawaii is close to Japan.
The virus is similar to A/Kentucky/UR06-0476/07 in NA.

I assume all the 6 sequences with H274Y from lanl are from this season,
except the Kansas one.
 
Re: :::Emergence of seasonal influenza viruses type A/H1N1 with:::

Re: :::Emergence of seasonal influenza viruses type A/H1N1 with:::

well, I don't know how much they tested in Japan the last weeks.
The mutation must have started somewhere.
Or maybe there are multiple appearances because the weather
is H274Y -friendly this year or such.
The Hawaii-sequences are instructive, Hawaii is close to Japan.
The virus is similar to A/Kentucky/UR06-0476/07 in NA.

I assume all the 6 sequences with H274Y from lanl are from this season,
except the Kansas one.
No, the sequences from LANL are from LAST season.
This has NOTHING to do with Japan.
The flu sequences with H274Y are the Solomon Island variant, which traces to SOUTHERN Asia.
 
Re: :::Emergence of seasonal influenza viruses type A/H1N1 with:::

Re: :::Emergence of seasonal influenza viruses type A/H1N1 with:::

No, the sequences from LANL are from LAST season.


how do you know ? They were uploaded 09.Jan.2008

A/Hawaii/21/2007 , submitted Jan.09,2008 (HA -Jan.06,2008)
A/Hawaii/28/2007 , submitted Jan.09,2008 (HA : Jan.06,2008)
A/Hawaii/28/2007 (same ?)
A/Massachusetts/05/2007 , only HA available, "Oseltamivir resistant" , HA submitted Aug.08,2008
A/Minnesota/23/2007 , submitted Jan.09,2008
A/Texas/31/2007 , submitted Oct.30,2007 (HA : Oct.30,2007)
A/Kansas/UR06-0104/2007 , submitted 18.Oct.2007 , collected 30.Jan.2007


BTW A/Texas/12/2007(H3N2) was also Oseltamivir resistant

hmm, Hawaii is 20? N, same as Hongkong,Taiwan,Okinawa
and has maybe not much seasonality.
 
Re: :::Emergence of seasonal influenza viruses type A/H1N1 with:::

Re: :::Emergence of seasonal influenza viruses type A/H1N1 with:::

FROM ECDC:
--
(1) [ECDC, ANTIVIRALS, SEASONAL INFLUENZA] Interim ECDC Risk Assessment - January 27th 2008 - Emergence of seasonal influenza viruses type A/H1N1 with oseltamivir resistance in some European Countries at the start of the 2007-8 influenza season (http://www.ecdc.europa.eu/pdf/080127_os.pdf)


1. Summary Statement
** Ordinary seasonal influenza viruses with significant resistance to the antiviral oseltamivir (Tamiflu) have been detected within the earliest part of this winter?s influenzas epidemics in Europe.

** The viruses are known as influenza A/H1N1 (H274Y), and they were fully sensitive to other influenza antivirals.

** These viruses have been detected by a European research and surveillance project known as VIRGIL (http://www.virgil-net.org/)
(supported by an EU grant) which has been undertaking routine surveillance for resistance in circulating influenza strains since 2004-5.


** H1N1 viruses are predominant in this winters epidemics worldwide, and these resistant viruses are a new phenomenon this winter.

** A limited amount of specialist testing has been undertaken for ten countries and a proportion of A/H1N1 viruses detected in four countries Denmark, France, Norway and the UK, have been found resistant to oseltamivir.

** Overall in Europe the proportion with oseltamivir resistant is around 13% but the proportions resistant are variable with Norway showing a markedly high proportion resistant (12 of 16).

** If the 16 Norwegian viruses are excluded the proportion with resistant would fall to around 5%.

** Data from Norway indicate that these viruses were transmitted in the country.

** To date there are no reports that they are making people any more ill than do other influenza A viruses.


** Normally A/H1N1 viruses as a group cause milder disease than some other human influenza viruses.

** However it must be realised that all influenza A viruses are potentially lethal for vulnerable individuals (the old and the very young and those with chronic debilitating conditions).

** It also needs to be remembered that antiviral resistant is a relative not absolute term.

** Patients ill with viruses that are deemed resistant in the laboratory often still seem to benefit when they receive antivirals.


** The source of these viruses is not known at present. It seems unlikely to have anything to do with antiviral use in Europe, since those drugs are very rarely used here. Specifically the resistance is not explained in the Norwegian patients by the source patients having taken any antivirals.


** These data come from only some 150 viral isolates from very early in this winter epidemics in ten of the thirty European countries therefore the results are preliminary and it would be unwise to make any statement for Europe as a whole. However Norway is still seeing them in specimens collected this month.

** There are some indications that A/H1N1 viruses with the same resistance mutation are being seen in some other countries, notably North America. However, the data from Europe is showing the highest resistance levels at present.


** A conclusive risk assessment cannot be attempted at present and there seems little reason to change clinical guidance except possibly where these new viruses predominate over all others.

** It could be that as the influenza season progresses these viruses will be overwhelmed by more fit and sensitive viruses (many influenza virus strains that are resistant to antivirals lack ?fitness?- i.e. they have a reduced ability to transmit or cause illness)

** Equally however the resistant viruses could come to spread and predominate. We simply do not know at present.


** There is considerable risk of confusion of this development with the separate issues of avian influenza, pandemic threat and antivirals stockpile. However, it is important to bear in mind that these new H1N1-H247Y viruses have limited pandemic potential as they are a variant of a widely circulating strain.

** This differs from a pandemic scenario, which is likely to be caused by a completely novel strain of influenza virus. Though guarantees of effectiveness against an unknown virus cannot be made there is no reason to believe that oseltamivir will be ineffective against novel strains.


** Equally it is important to appreciate that H1N1-H247Y is a human seasonal virus and must not be confused with avian influenza viruses notably the similarly named A/H5N1 which causes bird flu in poultry.

** Comments and suggestions for improvement are especially welcome in this interim document. These should be sent to influenza@ecdc.europa.eu with the subject heading Interim Risk Assessment ? antiviral resistance.


2. Specific Questions
What are the implications for human health from the emergence and detection of oseltamivir resistant influenza A/H1N1 seasonal influenza viruses in some European countries this winter?
What are the options for further actions that could be taken?


3. What has been detected - What is new?
Surveillance for antiviral resistance in influenza has been undertaken in the European Union (EU) and European Economic Area (EEA) since the winter of 2005-5. this is undertaken by the EU supported VIRGIL project. Following its agreed work-plan the central VIRGIL laboratories in London began testing specimens for the 2007-8 season in the week beginning January 23rd. These specimens came from people with proven human seasonal influenza in ten EU/EEA countries. They represented the earliest viruses detected in November and December 2007 before transmission started in earnest this month. (EISS/ECDCPressRelease), Arkema et al 2008).


** Preliminary data shows that overall 19 of the 148 (13%) influenza A(H1N1) virus isolates predominantly collected in November and December 2007 from 10 European countries, carry an amino-acid mutation histidine to tyrosine at position 274 (H274Y) in the neuraminidase protein, which in previous studies has been associated with high level of resistance to oseltamivir.


** An analysis by country shows that 12 of 16 Norwegian isolates, 4 of 19 French isolates, 2 of 75 United Kingdom isolates, and 1 of 10 isolates from Denmark carry the H274Y mutation. No mutations were found in 3 specimens from Austria, 4 each from Germany and Latvia, 5 specimens from Slovakia, 1 from Slovenia and 11 specimens from Spain.


The concentration in Norway is striking but without the specimens from there the prevalence of this type among all H1N1 isolates in Europe would be only around 5%.


** This is a new observation. Although early in the influenza season, the presence of oseltamivir-resistant viruses circulating in the community in at least 4 European countries is unusual if compared to the previous winter seasons (2004/2005, 2005/2006 and 2006/2007), when little or no evidence of oseltamivir resistance was detected in over 900 isolates tested from 24 countries [Monto et al, 2006; VIRGIL 2008, personal communication].

** However all the H1N1 viruses isolated and tested so far this year
are sensitive to the other antineuraminidase drug zanamivir and to the anti-M2 drugs amantadine and rimantadine. To date A/H1N1 have dominated the 2007-8 season in Europe and other parts of the Northern Hemisphere where surveillance is active (North America and Japan).(Arkema et al 2008)


** Further testing and relevant investigations are now underway. This is involving WHO (European Region and Headquarters), EISS, ECDC and Member States. Investigations are well advanced in Norway and the information from the National Institute for Public
Health (NIPH) is none of the 12 viruses were obtained from a person who has either been treated with oseltamivir, or knew they had been in close contact with another individual treated with oseltamivir. This makes it very unlikely that the finding of the emergence of the mutated strains represent the selection of resistant strains that sometimes can be seen in people who are receiving oseltamivir. Also none of the 12 cases report recent travel and there are no obvious epidemiological links between them. (NIPH personal communication)

** Therefore it can be assumed that viruses carrying the H274Y mutation represent community influenza transmissions in Europe (rather than importations or a focused outbreak).

** Certainly these viruses are to some extent fit and able to transmit and cause disease.

** The specimens tested by VIRGIL came from November and December 2007, The Norwegian National Influenza Centre has sequenced some specimens from this month (January 2008) and finds evidence that the resistant virus is persisting.

** To date there is no indication that the people with these infections are suffering from anything more than ordinary human influenza. While a few persons have been hospitalised that may be a surveillance artefact (in this case that people who are hospitalised are, in contrast to people who still at home, more likely to have a specimen taken and their influenza virus entering the surveillance system). However it must be realised that even ordinary seasonal influenza can be lethal, especially for those most
vulnerable (older people, people with debilitating diseases and the very young). ECDC estimates that each year ordinary seasonal influenza is responsible for around 40,000 deaths in the EU/EEA. [ECDC Influenza Fact Sheets, 2007]


4. Scientific Background Information
4.1 Surveillance
A series of systems deliver surveillance for influenza viruses world-wide. These are choreographed by the World Health Organisation Global Influenza Surveillance Network (GISN).
Central to it is the unrestricted sharing of information and viruses between countries. [ECDC Briefing 2007] In Europe there is the long-standing European Influenza Surveillance Scheme (EISS) which is currently integrating into other surveillance schemes with ECDC. In the Northern Hemisphere the season for intense clinical and virological influenza surveillance runs from Week 40 of one year in the Autumn to week 20 of the next year in the Spring. So seasons are referred to as Season 2004-5, Season 2006-7 etc. Background surveillance continues throughout the year. Monitoring of Influenza antiviral resistance in Europe is conducted as part of the European Surveillance Network for Vigilance against Viral Resistance (VIRGIL) in collaboration with the WHO Collaborating Centre at the MRC National Institute for Medical Research in London and the Community Network of Reference Laboratories for Human Influenza in Europe (CNRL) which is coordinated by EISS and is comprised of all the National Influenza Centres (NICs) in Europe [Meijer et al, 2005, 2006]. This central laboratory work on influenza for VIRGIL is undertaken at the Health Protection Agency Centre for Infection in London though this is supported by work across Europe and by the Neuraminidase Inhibitor Susceptibility Network (NISN) [Zambon M & Hayden FG, 2001]. Surveillance for antiviral resistance is carried out each winter influenza season and has been underway since 2004-5. The work is supported financially by the European Union though as it is based on a series of routine systems it also relies on considerable input and support from the countries concerned. Specimens are identified in EU member states and following initial work a subset of all virus isolates are sent centrally to the laboratories in London for full characterisation for the bi-annual WHO vaccine recommendations, and where they are tested for indicators of antiviral resistance [ Gerbil 2003, Meijer A et al, 2007].
At this time of year (January) surveillance work starts on the first specimens that have been gathered early in the season (November and December 2007). That is before proper transmission begins. This year transmission started in earnest in January 2008 [Arkema JMS et al, 2008].


4.2 Seasonal Influenza Epidemics

In temperate climates like Europe transmission of ordinary influenza (human seasonal influenza) takes place each year in the winter months with epidemics across Europe. In more tropical climates nearer the equator influenza transmission is thought to be more continuous through the year with over-laying epidemics. In the Southern Hemisphere the epidemics are the converse of those in Europe taking place in the period May to October. In recent years the European epidemics have rarely started in earnest before the New Year though early transmissions can always be detected in the late autumn. Human seasonal influenza is not caused by a single virus but by complex and variable mix of viruses the balance of which varies from year to year. Influenza viruses are inherently unstable and it is thought that small genetic changes are taking place in the viruses constantly (so called antigenic drift). This is the reason why there needs to be such careful surveillance of influenza and annual recommendations
made by WHO as to the composition of the influenza vaccines produced by industry. [Gerdil 2003]

In the 2007-8 season the dominant virus has been of type A/H1N1 which is usually associated with milder disease in humans than say the A/H3N2 [Arkema JMS et al 2008, Simonsen L, 2005]. The drivers for the changes are not fully understood though an important element is the instability of the RNA at the heart of the influenza viruses, their tendency to mutate spontaneously and to occasionally exchange genetic material (reassortment) when two viruses infect the same human or animal. Of late work known as
antigenic cartography has suggested that many of the new variants of human influenza viruses that have emerged recently come from the Far East and South East Asia [Smith et al 2004 & Smith 2006]. It is thought that subtly different influenza viruses are emerging constantly but many do not transmit efficiently (often they are said to lack fitness) and these then die out as they do not compete well with fitter viruses.


4.3 Influenza Pandemics

Very occasionally (four times since the late nineteenth century) larger changes led to the emergence of a new virus able to transmit efficiently from humans to humans and to which a large proportion of the population have no immunity. These spread as pandemics across the world. It is important to bear in mind that when talking about these new H1N1-H247Y viruses there is no reason to imagine that they have any more pandemic potential than other influenza viruses. Equally it is important to appreciate that H1N1-H247Y is a human seasonal virus and must not be confused with avian influenza viruses notably the similarly named A/H5N1 which causes bird flu in poultry.


4.4 Antiviral Resistance

There are two main groups of antivirals used against influenza viruses. In order of discovery these are the M2 ion channel inhibitors (M2Is) adamantenes (amantadine and rimantadine), and the neuraminidase inhibitors (NIs) (zanamivir and oseltamivir). (Moscona 2005b) Amantadine and rimantadine were licensed in the US with antiviral indications in 1966 and 1993 respectively. Zanamivir and oseltamivir became available in the late 1990s. Oseltamivir is often preferred over zanamivir for treatment purposes as it is available as tablets while zanamivir has to be inhaled. Oseltamivir has a Europe-wide license (EMEA), whilst adamantenes and zanamivir need to be licensed by country, and are not licensed in all countries.

Resistant Viruses in People on Treatment

As influenza viruses continuously change through mutation and recombination, drug resistance viruses are occasionally detected briefly in infected individuals during treatment with antivirals. This is why information has to be gathered on what treatment if any people with resistant viruses have had, or whether they have been in contact with those on treatment. However these viruses
usually lack fitness and do not transmit on. [Moscona 2005a] Resistance to Neuraminidase inhibitors This has been reported as occurring at very low level (<1%) in immunocompetent individuals screened during seasonal influenza epidemics [Monto AS, 2006] though cross resistance between oseltamivir and zanamivir is not common. Oseltamivir resistance in influenza viruses is relative and despite its presence patients with oseltamivir-resistant viruses may still benefit from receiving oseltamivir.[Moscona 2005a] Often the clinical outcome for patients with resistant viruses and treated with antivirals is not any different from patients carrying fully sensitive strains [De Jong MD et al, 2005 & Hayden FG, 2006] However, higher levels of antiviral resistance has been reported developing during treatment of children and immunosuppressed individuals [Kiso M et al, 2004; Hayden FG, 1997; Gubareva LV, 1998].


Types of Resistance

There are generally three levels of antiviral resistance according to the way that resistance can be detected or inferred:
a. Genotypic Resistance: detected through sequencing of the viral genome and identification of mutations previously associated with a certain level of drug resistance. Many national laboratories in Europe can undertake this testing
b. Phenotypic Resistance: resistance of the virus to drugs is tested in vitro (not in living systems) by measuring viral replication at different drug concentrations (IC50)
c. Clinical Resistance: based on animals (ferret or mice) and human patients and measuring or observing the actual response to treatment with antivirals.
Of course clinical resistance in humans is what is of most concern.[Moscona 2005b] Clinical resistance and the response to treatment with antivirals (the clinical response) remains the most important proof of antiviral effectiveness. A virus may have genetic markers associated with resistance (genotypic resistance) but still show satisfactory response either in the laboratory (phenotypic resistance) or when the antivirals are given
to patients (clinical resistance).
Genotypic mutations associated with drug resistance against oseltamivir are often observed to have defects in their basic virus characteristics including transmissibility and ability to replicate. This makes them ?unfit?. However the most commonly observed mutations conferring adamantane resistance did not seem to affect the virus fitness, and hence naturally resistant viruses are circulating at variable levels during seasonal epidemics.
Until these observations no rise in resistance to oseltamivir for ordinary transmitting human influenza viruses had been observed over time. This might be due to the fact that some of the NI resistance associated mutations are also associated with reduced influenza virus transmissibility and this might partially explain the low prevalence of primary NI resistance in viruses isolated from clinical and animal model settings.
The H274Y mutation has only been observed in viruses of neuraminidase type 1 (N1).
This mutation has been associated with a 400-fold reduction in the sensitivity of the virus to oseltamivir in vitro. There is contradictory evidence on the role of such mutation in affecting the viral fitness with some studies showing reduced replicative capacity and transmissibility and other showing similar fitness than the wild type viruses [Hurt AC et al, 2006].


Resistance to the Adamantenes.

Influenza viruses resistant to the adamantenes emerged as early as the late 1960s. The drivers for this emergence are not clear. In some areas of the world, like North America the proportion of influenza strains naturally resistant to this drug class has recently become unacceptably high to the point where they are not always the drug of choice for seasonal influenza [Fiore AE et al, 2007].


4.5 What is known about A/H1N1 viruses and specifically A/H1N1-H247Y?
In general A/H1N1 viruses are associated with milder illness than other influenza A viruses though like all influenza A viruses they can cause severe disease and death, especially in some vulnerable individuals. A/H1N1 viruses with the H274Y mutation have been seen before when they were detected in Japan in patients treated with oseltamivir. Those viruses were not subsequently detected to be circulating in the community except at very low levels so they may be a somewhat different phenomenon. However the earlier viruses were studied in animal models. This found that they could transmit from one animal to another but with lower efficiency than do ordinary A/H1N1 viruses. That said they are among the fitter of all antiviral resistant influenza viruses (F Hayden personal communication 2008).


4.6 What is being observed elsewhere?
WHO is now working intensively with its partners across the world to determine whether these first European observations are unique or occurring elsewhere. There are some indications that some of the same virus oseltamivir-resistant A/H1N1 viruses are being observed at low levels in the United States.. However detailed surveillance for the 2007-8 season is only just starting and more information will become available later.

4.7 Oseltamivir use in Europe

It is important to bear in mind that apart from in Japan and to a lesser extent the United States oseltamivir is not much used for treatment of seasonal influenza. This is especially so in Europe where it seems that in most countries the numbers of prescriptions for treatment are negligible.(Communication from Roche 2007) There were many prescriptions in 2005 and 2006 in some countries but most reports suggest that these were driven by anxiety over the threat from bird flu and were stored in homes rather than used for treatment. This has two implications. Firstly it makes it even more unlikely that these viruses have emerged as a result of use of oseltamivir in Europe. Secondly it is not that the case that clinicians may be losing the utility of a widely used drug.


5. Risks of Misunderstanding ? Risk Communication
Perhaps the greatest risk at present is that the information and risks are misunderstood, especially when WHO and ECDC lack the information to make definitive statements on risks. The possibility for confusion of these events with avian influenza (A/H5N1), pandemics and oseltamivir stockpiles is considerable. Therefore ECDC and WHO are preparing a series of Frequently Asked Questions and Answers (FAQs) and these will shortly be available on their web-sites. The ECDC FAQs are designed for adaptation and use by EU/EEA member states.


6. Formulation ? What is likely to emerge?
These are early days in this new development and it really is too soon to undertake any proper risk assessment. There is only information for viruses detected early in the 2007- 2008 (actually from people who become ill in November and December) from a limited number of isolates from ten European countries. Numbers tested for any individual country are low. Hence this interim assessment will be reviewed in the coming weeks and months and updated as more information rapidly becomes available from more testing, from other countries and especially as a result of work and consultations organised by WHO with which ECDC is working closely. It could be that as the season progresses these particular viruses are overwhelmed by other, fitter viruses. Equally however they could spread to other countries and become more prevalent as seasonal influenza transmission spreads across Europe.


7. Risk Statement
It is also too early to make any definitive risk statement and more information will be gathered for this as time goes along. However the most important points to be born in are:
? There is no indication as yet that these oseltamivir resistant viruses (A/H1N1 H274Y) are more virulent or are causing more severe disease than wild type influenza viruses. Though A/H1N1 usually causes less severe disease than say the A/H3N2 viruses it still can have severe outcomes even death in vulnerable people.
? This high level of resistance to oseltamivir observed in a relatively small number of samples tested might not be confirmed when more samples are tested and when there is widespread circulation of flu in the community.
? A/H1N1 viruses are well matched with the current seasonal influenza vaccine and therefore patients who received vaccination are already at lower risk of contracting the disease or developing severe complications than people who have not been immunised.
? Oseltamivir is not much used in Europe at present.
? While there are no international or EU guidelines for use of antivirals there are national guidelines in some EU countries which often recommend that antivirals are reserved mostly for prophylaxis or early treatment among patient with risk factors or those who are older (variously defined as being over 60 or 65 years).[National Institute for Health and Clinical Excellence (NICE) UK, National Institute for Public Health and the Environment RIVM, The Netherlands] Therefore the immediate implication of the reporting of oseltamivir resistance are limited and for those where antiviral prophylaxis or treatment is indicated alternative drugs can be used. However these national guidelines may need to be reviewed in the light of this development if the H1N1-H247Y viruses continue to appear and spread.


8. Options for Action in the EU
a. Further typing of specimens especially those detected after transmission started in earnest including specimens from the other EU-EEA countries with the objectives of seeing and tracking how H1N1-H247Y matures and evolves in Europe.
b. Proactive communication of further results and information for the public and professionals including ?rumour surveillance? looking for misunderstandings and responding to them
c. Descriptive investigations of the initial cases especially concerning their disease and response to any treatment with antivirals that they happen to be given.
d. Consideration of review of national guidelines clinical advice by those experienced in developing such guidance.
9. When will be reviewed - One month after publication date (may be updated Earlier if need be)


References
1. Arkema JMS, Meijer A, Paget WJ et al. The influenza season has started in a number of European countries Euro Surveill 2008;13(4). Available online
2. De Jong MD, Tranh TT, Khanh TH et al. Oseltamivir resistance during treatment of influenza A(H5N1) infection. N Engl J Med 2005; 353: 2667-72.
3. ECDC Briefing European Centre for Disease Prevention and Control. Interim ECDC Scientific and Public Health Briefing: Sharing influenza Virus Samples ? Version November 2007
4. ECDC Influenza Fact Sheet 2007
5. European Surveillance Network for Vigilance against Viral Resistance (VIRGIL)
6. Fiore AE, Shay DK, Haber P et al Advisory Committee on Immunization Practices (ACIP), Centers for Disease Control and Prevention (CDC). Prevention and control of influenza. Recommendations of the Advisory Committee on Immunization Practices (ACIP), 2007. MMWR Recomm Rep. 2007;56(RR-6):1-54.
7. Gerdil C. The annual production cycle for influenza vaccine. Vaccine 2003; 21: 1776-9.
8. Gubareva LV, Matrosovich MN, Brenner MK et al Evidence for zanamivir resistance in an immunocompromised child infected with influenza B virus. J Infect Dis. 1998;178(5):1257-62.
9. Hayden FG. Antiviral resistance in influenza viruses. Implications for management and pandemic response. NEJM 2006: 354: 785-8.
10. Hayden F, Klimov A, Tashiro M, et al. Neuraminidase Inhibitor Susceptibility Network position statement: antiviral resistance in influenza A/H5N1 viruses. Antivir Ther 2005; 10: 873-877.
11. Hayden FG. Prevention and treatment of influenza in immunocompromised patients. Am J Med. 1997;102(3A):55-60; discussion 75-6.
12. Hurt AC, Ho H, Barr I. Resistance to anti-influenza drugs: adamantanes and neuraminidase inhibitors. Expert Rev Anti Infect Ther 2006; 4:795-805.
13. Kiso M, Mitamura K, Sakai-Tagawa Y, et al Resistant influenza A viruses in children treated with oseltamivir: descriptive study. Lancet. 2004; 364 :759-65
14. Meijer A, Valette M, Manuguerra JC et al and Virology Working Group of the European Influenza Surveillance Scheme. Implementation of The Community Network of Reference Laboratories for Human Influenza in Europe. J Clin Virol.
2005;34:87-96.
15. Meijer A, Brown C, Hungnes O et al and Virology Task Groups of the European Influenza Surveillance Scheme. Programme of the Community Network of Reference Laboratories for Human Influenza to improve Influenza Surveillance in Europe. Vaccine. 2006;24:6717-23.
16. Meijer A, Lackenby A, Hay A, Zambon M. Influenza antiviral susceptibility monitoring activities in relation to national antiviral stockpiles in Europe during the winter 2006/2007 season. Euro Surveill. 2007 Apr 1;12(4):E3-4.
17. Monto AS, McKimm-Breschkin JL, Macken C, et al. Detection of influenza viruses resistant to neuraminidase inhibitors in global surveillance during the first 3 years of their use. Antimicrob Agents Chemother 2006; 50:2395-402.
18. Moscona A. Oseltamivir resistance--disabling our influenza defenses. N Engl J Med. 2005a; 353: 2667-72.
19. Moscona A Neuraminidase Inhibitors for Influenza N Engl J Med 2005b; 353:1363-1373.
20. Simonsen L. Impact of influenza vaccination on seasonal mortality in the US elderly population. Arch Intern Med. 2005;165:265-272.
21. Smith DJ, A. S. Lapedes, J. C. de Jong et al. Mapping the Antigenic and Genetic Evolution of Influenza Virus. Science 2004, 305, 371-376
22. Smith DJ. Predictability and preparedness in influenza control. Science 2006, 312, 392-394.
23. WHO recommendation :Recommended composition of influenza vaccines for use in the 2007-2008 influenza season. Wkly Epidemiol Rec. 2007;82:69-76.
24. Yen HL, Herlocher LM, Hoffmann E et al Neuraminidase inhibitor-resistant influenza viruses may differ substantially in fitness and transmissibility. Antimicrob Agents Chemother 2005; 49: 4075-84.
25. Zambon M, Hayden FG. Position statement: global neuraminidase inhibitor susceptibility network. Antiviral Res 2001;49:147-156
26. Zurcher T, Yates PJ, Daly J, et al Mutations conferring zanamivir resistance in human influenza virus N2 neuraminidases compromise virus fitness and are not stably maintained in vitro. J Antimicrob Chemother 2006;58:723-32.
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(2) [ECDC, WHO, ANTIVIRALS, SEASONAL INFLUENZA] ECDC/WHO FAQs for Oseltamivir Resistance (http://www.ecdc.europa.eu/pdf/FAQ_Oseltamivir.pdf)


Q1. How did WHO, the European Commission, the ECDC (European Centre for Disease Prevention and Control) and the European Medicines Agency learn about oseltamivir resistance in influenza viruses?
A1. The Norwegian authorities notified their EU partners, and WHO via the International Health Regulations (IHR) mechanism and the European Early Warning and Response System (EWRS), on 25 January 2008 about a high rate of resistance to an antiviral drug, oseltamivir (Tamiflu?) in seasonal influenza A(H1N1) viruses. Of 16 virus isolates tested, 12 (75%) were resistant to oseltamivir. All the viruses were collected from patients at the start of the influenza season in November and December 2007 in Norway.


Q2. Has oseltamivir resistance been found in other countries this influenza season?
As of 25th January, the European Surveillance Network for Vigilance Against Viral Resistance (VIRGIL), the WHO Collaborating Center, MRC National Institute for Medical Research in London and the European Influenza Surveillance Scheme (EISS) had reported that approximately 13% of around 150 H1N1 isolates from across Europe have shown resistance. Norway showed the highest proportion (over 70%) of resistant isolates, while much lower rates of resistance were found in viruses tested from France, the United Kingdom and Denmark.

Testing is now underway from other countries. WHO is seeking further information from participants in its Global Influenza Surveillance Network (GISN) to assess the extent of circulation of oseltamivir-resistant viruses.

GISN is a worldwide network of laboratories including National Influenza Centers (NICs) and Collaborating Centers (CCs) that collect and analyze thousands of viruses each year.

From what WHO has learned so far, none of the H1N1 isolates tested by the WHO CC in Tokyo or by China's Special Administrative Area of Hong Kong NIC were oseltamivir resistant last season (2006-7) or during the early part of the current season.

The Centers for Disease Control and Prevention in the United States have reported a 5% prevalence of resistance in H1N1 samples tested to date.

These pre liminary data indicate that oseltamivir resistance in H1N1 viruses is geographically variable but not limited to Europe. However, the distribution globally is yet not clear.


Q3. Have other types of influenza viruses tested resistant to oseltamivir?
A3. The elevated resistance to oseltamivir appears currently limited to seasonal H1N1 viruses and does not involve circulating H3N2 or influenza B viruses. All of the resistant H1N1 viruses in Europe have a specific resistance mutation in the viral neuraminidase (i.e., a histidine to tyrosine substitution at amino acid 274). Influenza H1N1 is the predominant influenza A virus currently circulating in many countries in Europe and other parts of the northern hemisphere this season but in other countries, influenza A H3N2 or a mixture of A and B viruses are predominant.


Q4. Is this a new problem?
A4. Resistance to oseltamivir in influenza viruses circulating in the community has been found before but at much lower levels. The high percentage of resistance to oseltamivir among circulating influenza viruses is new. Past surveillance studies have found rates typically ranging from 0% to <0.5%. The highest rate of oseltamivir resistance that had been reported previously for surveillance of community isolates was in Japan during 2005-06 when 2.2 % of 178 H1N1 isolates were found to be resistant. During the last winter season (2006-7), no resistant H1N1 variants were detected in isolates from Japan or Europe, and less than 1% of U.S. H1N1 isolates showed oseltamivir resistance. However, oseltamivir resistance is well-documented to emerge in persons being treated with the drug. In clinical studies, H1N1 viruses with this particular mutation have been detected in up to 16% of H1N1-infected children treated with oseltamivir. Typically, the resistant strains have emerged 3 to 6 days after treatment was begun but were not detected a few days later.


Q5. Did resistance develop because patients in Norway and other countries were taking oseltamivir?
A5. None of the patients in Norway or elsewhere in Europe were reported either to have taken oseltamivir or have been exposed to people who had taken oseltamivir. The lack of drug treatment is not unexpected since oseltamivir is not often prescribed by doctors in most European countries.


Q6. Is there an explanation for the high frequency of oseltamivir resistance?
A6. The frequency of oseltamivir resistance in H1N1 viruses in the current influenza season is unexpected and the reason why a high percentage of these viruses are resistant is currently unknown. Available information does not indicate selective drug pressure is driving the development of resistance since few of the patients are known to have taken oseltamivir. Influenza viruses are continuously changing and it is possible that a resistant strain has emerged spontaneously. Further detailed laboratory characterization of circulating H1N1 viruses and epidemiological information on patients will be needed to help answer this question.


Q7. Did the patients with resistant viruses have any links to one another?
A7. No. Preliminary investigation so far suggest that most of the persons with resistant viruses were not in contact or linked in any known way. Patients were not limited to a particular geographic location in a country. In general, patients in Norway were not known to have traveled to other countries before becoming ill. These findings are consistent with this virus strain circulating at community level in some European countries.


Q8. What sort of illness has been associated with the resistant viruses?
A8. There is no evidence that the resistant viruses are causing more severe illness than other influenza viruses. Information is limited at present, but the Norwegian patients appear to have had typical influenza illness. Three of them were hospitalized and later discharged. As for the other seasonal influenza viruses, also the ones with Oseltamivir resistance can cause severe disease and fatalities among vulnerable people such as infants and the elderly. However, influenza seasons in which H1N1 viruses predominate typically are associated with less severe illness and lower mortality overall than seasons in which H3N2 viruses are predominant.


Q9. How easily are oseltamivir resistant viruses transmitted between people?
A9. The available evidence indicates that these oseltamivir-resistant H1N1 viruses are transmissible from one person to another, but there is no evidence that the resistant H1N1 viruses are more transmissible between people than non-resistant viruses. Past studies in Japan suggested that low-level community transmission may occur with H1N1 viruses possessing the same resistance mutation that has been found in these recent cases. H1N1 viruses with this mutation are transmissible between laboratory animals.


Q10. How does resistance affect oseltamivir's activity against the influenza virus?
A10. Oseltamivir is an antiviral drug that blocks influenza viruses from spreading in the respiratory tract. The current resistant H1N1 viruses have been found to contain a specific mutation that makes them highly resistant to oseltamivir. This means that oseltamivir would most likely be ineffective for treating or preventing infections caused by these resistant H1N1 strains, although the drug will be effective against other influenza virus infections.


Q11. Are there other drugs that can be used to treat oseltamivir resistant H1N1 virus infection?
A11. To date the oseltamivir-resistant H1N1 isolates this season have been fully susceptible to the other available antiviral drugs, zanamivir and the adamantanes (amantadine and rimantadine). These would be alternative drugs for prevention or treatment of oseltamivir-resistant H1N1 infections. However, in many parts of the world, influenza viruses are now resistant to the adamantane drugs.


Q12. Is this season?s influenza vaccine effective against oseltamivir resistant strains?
A12. The antiviral susceptibility and influenza vaccine effectiveness are based on different mechanisms. The oseltamivir resistance mutation does not affect the vaccine effectiveness. So far this influenza season, A(H1N1) viruses is predominant in most parts of northern hemisphere, and the majority are antigenically similar to A/Solomon Islands/3/2006, a vaccine virus. Immunization with this season's vaccine remains an effective means of prevention against illness due to influenza viruses, including the oseltamivir-resistant H1N1 variants.


Q13. Do the oseltamivir resistant viruses pose any risk to cause a pandemic?
A13. No, human seasonal H1N1 viruses, including those with a resistance mutation, do not have the potential to cause a pandemic. The current type of human H1N1 viruses have been circulating widely in the population for many years without leading to a pandemic.


Q14. What potential implications could the findings of oseltamivir resistance among seasonal viruses have for the treatment of H5N1 cases?
A14. Oseltamivir resistance due to the same mutation has been reported in three patients with H5N1 infection who were treated with oseltamivir. There are no reports of persons acquiring H5N1 infection from a patient with an oseltamivir resistant H5N1 virus.


Q15. What implications does oseltamivir resistance in seasonal H1N1 viruses have for the avian influenza H5N1?
A15. The implications are uncertain at this point. The neuraminidase protein in human H1N1 viruses is different from that in avian H5N1 viruses. Until we learn why the unexpected increase in oseltamivir resistance has occurred in H1N1 viruses, it is too early to know what, if any, potential there might be for a similar increase in resistance to occur in H5N1 viruses. Furthermore, H5N1 viruses have not shown the ability to spread efficiently from person-to-person. WHO has not changed any of its recommendations regarding H5N1 treatment and preparations.


Q16. What is being done about the situation?
A16. WHO, the European Commission and ECDC and other organizations worldwide are working together to gather additional information on antiviral resistance in H1N1 viruses. The Collaborating Centers in WHO's Global Influenza Surveillance Network (GISN) and the VIRGIL Network perform testing and share the results of antiviral susceptibility data on seasonal human viruses and H5N1 isolates.WHO is also consulting with a variety of experts to assess the public health implications of these findings and the possible need for additional guidance. ECDC has published an interim Risk Assessment, which is available
at: http://ecdc.europa.eu/pdf/080127_os.pdf. WHO, the European Commission and ECDC will continue to collaborate in monitoring the situation carefully, seeking advice from experts, and providing updated information as it becomes available.


Q17. What is going to happen? Is the oseltamivir resistant strain of H1N1 likely to become the predominant strain of H1N1 worldwide this influenza season?
A17. It is simply too early to know. Information to date indicates that the resistant virus is transmissible from person to person. However, the prevalence of resistant viruses varies widely in European countries and they are predominant only in Norway at present. Previous laboratory studies have found that influenza viruses with this specific resistance mutation can transmit from one animal to another but may not be as infectious when compared with the non-resistant "parent" virus. Thus, it is possible that the resistant strain will not become more common in other countries. Careful monitoring will be required throughout the rest of the season to follow the situation globally.


Q 18. How can I protect myself and my family from seasonal influenza?
A18. Seasonal influenza vaccination is the primary means of influenza prevention. Following national guidance, people in high-risk groups for influenza complications (i.e older persons, those with chronic conditions, etc) should get vaccinated against influenza, if they have not already done so.
o Seasonal vaccines are effective for those who wish to reduce their risk of influenza and some countries advise use in travelers to influenza-affected countries.
People can also take steps to reduce the spread of influenza:
o Where possible, people infected with influenza should avoid close contact with others
o Basic hygiene measures, particularly covering coughs and sneezes and handwashing, are likely effective in reducing the spread of influenza

Antiviral drugs that are active against seasonal influenza viruses, including the resistant H1N1 virus, are available in many countries.
Updated: 31 January 2008
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