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July San Paolo Sequence Released

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  • Re: July San Paolo Sequence Released

    Originally posted by niman View Post
    Influenza has survived for eons, ......
    Snick:

    An example of another virus that knows what it is doing (prime directive = persist) and has been around for eons is the mimivirus.
    Because its lineage is very old and could have emerged prior to cellular organisms, mimivirus has added to the debate over the origins of life. Some genes unique to mimivirus, including those coding for the capsid, have been conserved in a variety of viruses which infect organisms from all domains - Eukarya, Archaea and Bacteria. This has been used to suggest that mimivirus is related to a type of DNA virus that emerged before cellular organisms and played a key role in the development of all life on Earth.[
    http://en.wikipedia.org/wiki/Mimivirus


    if you read the Discovery magazine article here I believe you'll be impressed by the capabilities of the virus.

    .
    "The next major advancement in the health of American people will be determined by what the individual is willing to do for himself"-- John Knowles, Former President of the Rockefeller Foundation

    Comment


    • Re: July San Paolo Sequence Released

      Thanks for the links AD. I was unaware of 'mimiviruses'. Actually, were not far from being on the same page. Here's a link you might find interesting.

      http://en.wikipedia.org/wiki/Complex_adaptive_system

      In any case, nothing from any of 'our' links implies the intentionality of Niman's statemets like unto 'the virus knows what it's doing'.... People who haven't read your links or mine, could easily misinterpret, and draw the wrong conclusions to base their actions, and state of concern, upon.

      Comment


      • Re: July San Paolo Sequence Released

        Originally posted by niman View Post
        The two polymorphisms C1263T and A1287G and everything in between are represented in the following travel log (and the isolate with both has been corrected to the name below) - swine sequences bolded
        The same sequences with C1263T and A1287G also have G1761A as does the argentina sequence with the tandem polymorphisms:
        G1761A
        8019-Argentina-2009-S3-PA-2
        Code:
        gb|CY042208.1|  Influenza A virus (A/mallard/Minnesota/Sg-0021...  44.1    0.006
        gb|CY042989.1|  Influenza A virus (A/blue-winged teal/North Da...  44.1    0.006
        gb|CY042985.1|  Influenza A virus (A/blue-winged teal/North Da...  44.1    0.006
        gb|CY042981.1|  Influenza A virus (A/blue-winged teal/North Da...  44.1    0.006
        gb|CY042977.1|  Influenza A virus (A/blue-winged teal/North Da...  44.1    0.006
        gb|CY042969.1|  Influenza A virus (A/blue-winged teal/North Da...  44.1    0.006
        gb|CY042961.1|  Influenza A virus (A/blue-winged teal/North Da...  44.1    0.006
        gb|CY042949.1|  Influenza A virus (A/blue-winged teal/North Da...  44.1    0.006
        gb|CY042913.1|  Influenza A virus (A/mallard/Minnesota/Sg-0069...  44.1    0.006
        gb|CY042893.1|  Influenza A virus (A/mallard/Minnesota/Sg-0068...  44.1    0.006
        gb|CY042747.1|  Influenza A virus (A/northern shoveler/Minneso...  44.1    0.006
        gb|CY042679.1|  Influenza A virus (A/mallard/Minnesota/Sg-0063...  44.1    0.006
        gb|CY042601.1|  Influenza A virus (A/ruddy turnstone/New Jerse...  44.1    0.006
        gb|CY042587.1|  Influenza A virus (A/ruddy turnstone/New Jerse...  44.1    0.006
        gb|CY042582.1|  Influenza A virus (A/ruddy turnstone/New Jerse...  44.1    0.006
        gb|CY042578.1|  Influenza A virus (A/ruddy turnstone/New Jerse...  44.1    0.006
        gb|CY042574.1|  Influenza A virus (A/ruddy turnstone/New Jerse...  44.1    0.006
        gb|CY042571.1|  Influenza A virus (A/ruddy turnstone/Delaware/...  44.1    0.006
        gb|CY042567.1|  Influenza A virus (A/ruddy turnstone/New Jerse...  44.1    0.006
        gb|CY042563.1|  Influenza A virus (A/ruddy turnstone/New Jerse...  44.1    0.006
        gb|CY042553.1|  Influenza A virus (A/ruddy turnstone/New Jerse...  44.1    0.006
        gb|CY042548.1|  Influenza A virus (A/ruddy turnstone/Delaware/...  44.1    0.006
        gb|CY042542.1|  Influenza A virus (A/ruddy turnstone/Delaware/...  44.1    0.006
        gb|CY042538.1|  Influenza A virus (A/ruddy turnstone/New Jerse...  44.1    0.006
        gb|CY042530.1|  Influenza A virus (A/ruddy turnstone/New Jerse...  44.1    0.006
        gb|CY042526.1|  Influenza A virus (A/ruddy turnstone/New Jerse...  44.1    0.006
        gb|CY042517.1|  Influenza A virus (A/ruddy turnstone/New Jerse...  44.1    0.006
        gb|CY042513.1|  Influenza A virus (A/ruddy turnstone/New Jerse...  44.1    0.006
        gb|CY042510.1|  Influenza A virus (A/ruddy turnstone/New Jerse...  44.1    0.006
        gb|CY042502.1|  Influenza A virus (A/ruddy turnstone/New Jerse...  44.1    0.006
        gb|CY042498.1|  Influenza A virus (A/ruddy turnstone/New Jerse...  44.1    0.006
        gb|CY042494.1|  Influenza A virus (A/ruddy turnstone/New Jerse...  44.1    0.006
        gb|CY042491.1|  Influenza A virus (A/ruddy turnstone/New Jerse...  44.1    0.006
        gb|CY042487.1|  Influenza A virus (A/ruddy turnstone/New Jerse...  44.1    0.006
        gb|CY042484.1|  Influenza A virus (A/ruddy turnstone/New Jerse...  44.1    0.006
        gb|CY042480.1|  Influenza A virus (A/ruddy turnstone/New Jerse...  44.1    0.006
        gb|CY042472.1|  Influenza A virus (A/ruddy turnstone/New Jerse...  44.1    0.006
        gb|CY042464.1|  Influenza A virus (A/ruddy turnstone/New Jerse...  44.1    0.006
        gb|CY042461.1|  Influenza A virus (A/ruddy turnstone/New Jerse...  44.1    0.006
        gb|CY042446.1|  Influenza A virus (A/ruddy turnstone/New Jerse...  44.1    0.006
        gb|CY042436.1|  Influenza A virus (A/ruddy turnstone/New Jerse...  44.1    0.006
        gb|CY042433.1|  Influenza A virus (A/sanderling/New Jersey/Sg-...  44.1    0.006
        gb|CY042424.1|  Influenza A virus (A/ruddy turnstone/New Jerse...  44.1    0.006
        gb|CY042418.1|  Influenza A virus (A/ruddy turnstone/Delaware/...  44.1    0.006
        gb|CY042414.1|  Influenza A virus (A/ruddy turnstone/Delaware/...  44.1    0.006
        gb|CY042409.1|  Influenza A virus (A/ruddy turnstone/New Jerse...  44.1    0.006
        gb|CY042406.1|  Influenza A virus (A/ruddy turnstone/Delaware/...  44.1    0.006
        gb|CY042402.1|  Influenza A virus (A/mallard/Minnesota/Sg-0046...  44.1    0.006
        gb|CY042398.1|  Influenza A virus (A/mallard/Minnesota/Sg-0046...  44.1    0.006
        gb|CY042383.1|  Influenza A virus (A/northern pintail/South Da...  44.1    0.006
        gb|CY042367.1|  Influenza A virus (A/mallard/South Dakota/Sg-0...  44.1    0.006
        gb|CY042347.1|  Influenza A virus (A/blue-winged teal/Minnesot...  44.1    0.006
        gb|CY042331.1|  Influenza A virus (A/mallard/Minnesota/Sg-0044...  44.1    0.006
        gb|CY042323.1|  Influenza A virus (A/blue-winged teal/South Da...  44.1    0.006
        gb|CY042307.1|  Influenza A virus (A/chicken/Pennsylvania/Sg-0...  44.1    0.006
        gb|CY042253.1|  Influenza A virus (A/mallard/Minnesota/Sg-0024...  44.1    0.006
        gb|CY042243.1|  Influenza A virus (A/mallard/Minnesota/Sg-0023...  44.1    0.006
        gb|CY042194.1|  Influenza A virus (A/mallard/Minnesota/Sg-0020...  44.1    0.006
        gb|CY042180.1|  Influenza A virus (A/mallard/Minnesota/Sg-0019...  44.1    0.006
        gb|CY042132.1|  Influenza A virus (A/mallard/Minnesota/Sg-0016...  44.1    0.006
        gb|CY042124.1|  Influenza A virus (A/mallard/Minnesota/Sg-0016...  44.1    0.006
        gb|CY042094.1|  Influenza A virus (A/redheaded duck/Minnesota/...  44.1    0.006
        gb|CY042015.1|  Influenza A virus (A/mallard duck/Minnesota/Sg...  44.1    0.006
        gb|CY041886.1|  Influenza A virus (A/green-winged teal/Minneso...  44.1    0.006
        gb|CY031008.2|  Influenza A virus (A/turkey/Minnesota/1138/198...  44.1    0.006
        gb|GQ257378.1|  Influenza A virus (A/mallard/Minnesota/249/200...  44.1    0.006
        gb|GQ257409.1|  Influenza A virus (A/unknown/New York/1971-40/...  44.1    0.006
        gb|GQ257416.1|  Influenza A virus (A/guinea fowl/New Jersey/88...  44.1    0.006
        gb|GQ257430.1|  Influenza A virus (A/guinea fowl/New York/2641...  44.1    0.006
        gb|GQ257452.1|  Influenza A virus (A/mallard/Maryland/13/2003(...  44.1    0.006
        gb|CY039738.1|  Influenza A virus (A/mallard/California/7766/2...  44.1    0.006
        gb|CY039714.1|  Influenza A virus (A/env/California/7335/2008(...  44.1    0.006
        gb|CY039706.1|  Influenza A virus (A/env/California/7313/2008(...  44.1    0.006
        gb|CY039699.1|  Influenza A virus (A/env/California/7303/2008(...  44.1    0.006
        gb|CY039691.1|  Influenza A virus (A/env/California/7286/2008(...  44.1    0.006
        gb|CY039683.1|  Influenza A virus (A/env/California/7279/2008(...  44.1    0.006
        gb|CY039611.1|  Influenza A virus (A/northern pintail/Californ...  44.1    0.006
        gb|CY039587.1|  Influenza A virus (A/northern shoveler/Califor...  44.1    0.006
        gb|CY039563.1|  Influenza A virus (A/greater white-fronted goo...  44.1    0.006
        gb|CY039555.1|  Influenza A virus (A/gadwall/California/AKS514...  44.1    0.006
        gb|CY039539.1|  Influenza A virus (A/green winged teal/Califor...  44.1    0.006
        gb|CY039793.1|  Influenza A virus (A/northern shoveler/Interio...  44.1    0.006
        gb|FJ520051.1|  Influenza A virus (A/northern pintail/Californ...  44.1    0.006
        gb|FJ520056.1|  Influenza A virus (A/northern pintail/Californ...  44.1    0.006
        gb|FJ520057.1|  Influenza A virus (A/northern pintail/Californ...  44.1    0.006
        gb|FJ520059.1|  Influenza A virus (A/northern pintail/Californ...  44.1    0.006
        gb|FJ520060.1|  Influenza A virus (A/northern pintail/Californ...  44.1    0.006
        gb|FJ520063.1|  Influenza A virus (A/northern pintail/Californ...  44.1    0.006
        gb|FJ520071.1|  Influenza A virus (A/northern pintail/Californ...  44.1    0.006
        gb|FJ520072.1|  Influenza A virus (A/northern pintail/Californ...  44.1    0.006
        gb|FJ520073.1|  Influenza A virus (A/northern pintail/Californ...  44.1    0.006
        gb|FJ520075.1|  Influenza A virus (A/northern pintail/Californ...  44.1    0.006
        gb|FJ520076.1|  Influenza A virus (A/northern pintail/Californ...  44.1    0.006
        gb|FJ520077.1|  Influenza A virus (A/northern pintail/Californ...  44.1    0.006
        gb|CY039308.1|  Influenza A virus (A/unknown/New York/78436/20...  44.1    0.006
        gb|CY038245.1|  Influenza A virus (A/ruddy turnstone/New Jerse...  44.1    0.006
        gb|CY038235.1|  Influenza A virus (A/ruddy turnstone/New Jerse...  44.1    0.006
        gb|CY038230.1|  Influenza A virus (A/ruddy turnstone/New Jerse...  44.1    0.006
        gb|CY038195.1|  Influenza A virus (A/ruddy turnstone/Delaware/...  44.1    0.006
        gb|CY038185.1|  Influenza A virus (A/ruddy turnstone/New Jerse...  44.1    0.006
        gb|CY038175.1|  Influenza A virus (A/ruddy turnstone/New Jerse...  44.1    0.006
        gb|CY038165.1|  Influenza A virus (A/ruddy turnstone/New Jerse...  44.1    0.006
        gb|CY038160.1|  Influenza A virus (A/ruddy turnstone/New Jerse...  44.1    0.006
        gb|CY038155.1|  Influenza A virus (A/ruddy turnstone/New Jerse...  44.1    0.006
        gb|CY038150.1|  Influenza A virus (A/ruddy turnstone/New Jerse...  44.1    0.006
        gb|CY038135.1|  Influenza A virus (A/ruddy turnstone/New Jerse...  44.1    0.006
        gb|CY038130.1|  Influenza A virus (A/ruddy turnstone/New Jerse...  44.1    0.006
        gb|CY038125.1|  Influenza A virus (A/ruddy turnstone/New Jerse...  44.1    0.006
        gb|CY038120.1|  Influenza A virus (A/ruddy turnstone/New Jerse...  44.1    0.006
        gb|CY038110.1|  Influenza A virus (A/ruddy turnstone/New Jerse...  44.1    0.006
        gb|CY038100.1|  Influenza A virus (A/ruddy turnstone/New Jerse...  44.1    0.006
        gb|CY038085.1|  Influenza A virus (A/ruddy turnstone/New Jerse...  44.1    0.006
        gb|CY038080.1|  Influenza A virus (A/ruddy turnstone/New Jerse...  44.1    0.006
        gb|CY038075.1|  Influenza A virus (A/red knot/New Jersey/Sg-00...  44.1    0.006
        gb|CY038070.1|  Influenza A virus (A/ruddy turnstone/New Jerse...  44.1    0.006
        gb|CY038055.1|  Influenza A virus (A/red knot/New Jersey/Sg-00...  44.1    0.006
        gb|CY038045.1|  Influenza A virus (A/ruddy turnstone/New Jerse...  44.1    0.006
        gb|CY038030.1|  Influenza A virus (A/ruddy turnstone/Delaware/...  44.1    0.006
        gb|FJ686719.1|  Influenza A virus (A/mallard/Ohio/362/2003(H2N...  44.1    0.006
        gb|FJ686735.1|  Influenza A virus (A/mallard/Ohio/365/2003(H2N...  44.1    0.006
        gb|FJ686743.1|  Influenza A virus (A/mallard/Maryland/897/2004...  44.1    0.006
        gb|CY037012.1|  Influenza A virus (A/blue-winged teal/Manitoba...  44.1    0.006
        gb|CY036764.1|  Influenza A virus (A/mallard/Wisconsin/944/198...  44.1    0.006
        gb|CY036756.1|  Influenza A virus (A/environment/New York/1165...  44.1    0.006
        gb|FJ517299.1|  Influenza A virus (A/mallard/Minnesota/354/199...  44.1    0.006
        gb|FJ517303.1|  Influenza A virus (A/mallard/Minnesota/371/199...  44.1    0.006
        gb|FJ517307.1|  Influenza A virus (A/mallard/Minnesota/192/199...  44.1    0.006
        gb|FJ517324.1|  Influenza A virus (A/guinea fowl/NJ/14190-23/1...  44.1    0.006
        gb|FJ517339.1|  Influenza A virus (A/mallard/Ohio/338/1986(H4N...  44.1    0.006
        gb|CY036631.1|  Influenza A virus (A/duck/Massachusetts/Sg-004...  44.1    0.006
        gb|CY036579.1|  Influenza A virus (A/chicken/Pennsylvania/Sg-0...  44.1    0.006
        gb|CY036039.1|  Influenza A virus (A/Muscovy duck/New York/620...  44.1    0.006
        gb|CY035856.1|  Influenza A virus (A/northern shoveler/Califor...  44.1    0.006
        gb|CY035848.1|  Influenza A virus (A/northern pintail/Californ...  44.1    0.006
        gb|EU557478.1|  Influenza A virus (A/northern pintail/Alaska/4...  44.1    0.006
        gb|EU557477.1|  Influenza A virus (A/northern pintail/Alaska/4...  44.1    0.006
        gb|EU557453.1|  Influenza A virus (A/northern pintail/Alaska/4...  44.1    0.006
        gb|EU557456.1|  Influenza A virus (A/northern pintail/Alaska/4...  44.1    0.006
        gb|CY035798.1|  Influenza A virus (A/mallard/Interior Alaska/2...  44.1    0.006
        gb|CY035699.1|  Influenza A virus (A/unknown/New York/Sg-00327...  44.1    0.006
        gb|CY035695.1|  Influenza A virus (A/unknown/New York/Sg-00326...  44.1    0.006
        gb|CY035660.1|  Influenza A virus (A/chuckar/New Jersey/Sg-003...  44.1    0.006
        gb|CY035656.1|  Influenza A virus (A/waterfowl/New Jersey/Sg-0...  44.1    0.006
        gb|CY035652.1|  Influenza A virus (A/duck/New Jersey/Sg-00315/...  44.1    0.006
        gb|CY035641.1|  Influenza A virus (A/turkey/New Jersey/Sg-0031...  44.1    0.006
        gb|CY035583.1|  Influenza A virus (A/guinea fowl/New Jersey/Sg...  44.1    0.006
        gb|CY035515.1|  Influenza A virus (A/guinea fowl/New York/Sg-0...  44.1    0.006
        gb|CY035508.1|  Influenza A virus (A/chicken/New Jersey/Sg-002...  44.1    0.006
        gb|CY035498.1|  Influenza A virus (A/guinea fowl/New York/Sg-0...  44.1    0.006
        gb|CY035490.1|  Influenza A virus (A/chicken/New York/Sg-00270...  44.1    0.006
        gb|CY035488.1|  Influenza A virus (A/duck/Pennsylvania/Sg-0026...  44.1    0.006
        gb|CY035485.1|  Influenza A virus (A/chicken/New Jersey/Sg-002...  44.1    0.006
        gb|CY035483.1|  Influenza A virus (A/chicken/New Jersey/Sg-002...  44.1    0.006
        gb|CY035481.1|  Influenza A virus (A/duck/New Jersey/Sg-00266/...  44.1    0.006
        gb|CY035473.1|  Influenza A virus (A/guinea fowl/New York/Sg-0...  44.1    0.006
        gb|CY035458.1|  Influenza A virus (A/chicken/New York/Sg-00256...  44.1    0.006
        gb|CY035450.1|  Influenza A virus (A/blue-winged teal/Texas/Sg...  44.1    0.006
        gb|CY035390.1|  Influenza A virus (A/mallard/Minnesota/Sg-0021...  44.1    0.006
        gb|CY035374.1|  Influenza A virus (A/mallard/Minnesota/Sg-0021...  44.1    0.006
        gb|CY035370.1|  Influenza A virus (A/blue-winged teal/Texas/Sg...  44.1    0.006
        gb|CY035367.1|  Influenza A virus (A/blue-winged teal/Texas/Sg...  44.1    0.006
        gb|CY035347.1|  Influenza A virus (A/blue-winged teal/Minnesot...  44.1    0.006
        gb|CY035345.1|  Influenza A virus (A/mallard/Minnesota/Sg-0020...  44.1    0.006
        gb|CY035337.1|  Influenza A virus (A/northern pintail/Minnesot...  44.1    0.006
        gb|CY035333.1|  Influenza A virus (A/mallard/Minnesota/Sg-0019...  44.1    0.006
        gb|CY035330.1|  Influenza A virus (A/mallard/Minnesota/Sg-0019...  44.1    0.006
        gb|CY035327.1|  Influenza A virus (A/mallard/Minnesota/Sg-0019...  44.1    0.006
        gb|CY035311.1|  Influenza A virus (A/mallard/Minnesota/Sg-0018...  44.1    0.006
        gb|CY035307.1|  Influenza A virus (A/mallard/Minnesota/Sg-0017...  44.1    0.006
        gb|CY035302.1|  Influenza A virus (A/mallard/Minnesota/Sg-0017...  44.1    0.006
        gb|CY035291.1|  Influenza A virus (A/mallard/Minnesota/Sg-0017...  44.1    0.006
        gb|CY035284.1|  Influenza A virus (A/mallard/Minnesota/Sg-0016...  44.1    0.006
        gb|CY035267.1|  Influenza A virus (A/mallard/Minnesota/Sg-0016...  44.1    0.006
        gb|CY035260.1|  Influenza A virus (A/blue-winged teal/Texas/Sg...  44.1    0.006
        gb|CY035256.1|  Influenza A virus (A/blue-winged teal/Texas/Sg...  44.1    0.006
        gb|CY035252.1|  Influenza A virus (A/blue-winged teal/Texas/Sg...  44.1    0.006
        gb|FJ357125.1|  Influenza A virus (A/mallard/MD/41/2003(H1N1))...  44.1    0.006
        gb|FJ357133.1|  Influenza A virus (A/mallard/MD/42/2003(H1N1))...  44.1    0.006
        gb|FJ349252.1|  Influenza A virus (A/mallard/ZhaLong/88/2004(H...  44.1    0.006
        gb|EU500859.1|  Influenza A virus (A/chicken/SK/HR-00011/2007(...  44.1    0.006
        gb|EU500851.1|  Influenza A virus (A/American black duck/NB/25...  44.1    0.006
        gb|EU500843.1|  Influenza A virus (A/Canada goose/BC/3752/2007...  44.1    0.006
        gb|CY034665.1|  Influenza A virus (A/mallard duck/Minnesota/Sg...  44.1    0.006
        gb|CY034637.1|  Influenza A virus (A/mallard duck/Minnesota/Sg...  44.1    0.006
        gb|CY034633.1|  Influenza A virus (A/mallard duck/Minnesota/Sg...  44.1    0.006
        gb|CY034631.1|  Influenza A virus (A/mallard duck/Minnesota/Sg...  44.1    0.006
        gb|CY030992.1|  Influenza A virus (A/turkey/England/N28/1973(H...  44.1    0.006
        gb|EU636683.1|  Influenza A virus (A/turkey/England/N28/73(H5N...  44.1    0.006
        gb|EU798892.1|  Influenza A virus (A/swine/Korea/CAS09/2006(H3...  44.1    0.006
        gb|EU798891.1|  Influenza A virus (A/swine/Korea/CAS07/2005(H3...  44.1    0.006
        gb|EU798890.1|  Influenza A virus (A/swine/Korea/CAN04/2005(H3...  44.1    0.006
        gb|EU980506.1|  Influenza A virus (A/mallard/MD/185/2003(H5N2)...  44.1    0.006
        gb|EU980513.1|  Influenza A virus (A/mallard/MD/11/2003(H1N1))...  44.1    0.006
        gb|EU982321.1|  Influenza A virus (A/turkey/TX/4-1-81/1981(H9N...  44.1    0.006
        gb|CY034172.1|  Influenza A virus (A/cinnamon teal/California/...  44.1    0.006
        gb|CY034150.1|  Influenza A virus (A/northern shoveler/Califor...  44.1    0.006
        gb|EU880825.1|  Influenza A virus (A/turkey/CA/358533/2005(H4N...  44.1    0.006
        gb|CY033783.1|  Influenza A virus (A/mallard duck/Minnesota/Sg...  44.1    0.006
        gb|CY033778.1|  Influenza A virus (A/mallard duck/Minnesota/Sg...  44.1    0.006
        gb|CY033769.1|  Influenza A virus (A/mallard duck/Minnesota/Sg...  44.1    0.006
        gb|CY033753.1|  Influenza A virus (A/mallard duck/Minnesota/Sg...  44.1    0.006
        gb|CY033738.1|  Influenza A virus (A/cinnamon teal/Texas/Sg-00...  44.1    0.006
        gb|CY033725.1|  Influenza A virus (A/blue-winged teal/Texas/Sg...  44.1    0.006
        gb|CY033705.1|  Influenza A virus (A/mallard duck/Minnesota/Sg...  44.1    0.006
        gb|CY033694.1|  Influenza A virus (A/mallard duck/Minnesota/Sg...  44.1    0.006
        gb|CY033686.1|  Influenza A virus (A/blue-winged teal/Minnesot...  44.1    0.006
        gb|CY033683.1|  Influenza A virus (A/blue-winged teal/Minnesot...  44.1    0.006
        gb|CY033679.1|  Influenza A virus (A/blue-winged teal/Minnesot...  44.1    0.006
        gb|CY033670.1|  Influenza A virus (A/blue-winged teal/Minnesot...  44.1    0.006
        gb|CY033666.1|  Influenza A virus (A/blue-winged teal/Minnesot...  44.1    0.006
        gb|CY033659.1|  Influenza A virus (A/blue-winged teal/Minnesot...  44.1    0.006
        gb|CY033435.1|  Influenza A virus (A/American wigeon/Californi...  44.1    0.006
        gb|CY033419.1|  Influenza A virus (A/American wigeon/Californi...  44.1    0.006
        gb|CY033411.1|  Influenza A virus (A/American wigeon/Californi...  44.1    0.006
        gb|CY033403.1|  Influenza A virus (A/ring necked duck/Californ...  44.1    0.006
        gb|CY033395.1|  Influenza A virus (A/American wigeon/Californi...  44.1    0.006
        gb|CY033387.1|  Influenza A virus (A/American wigeon/Californi...  44.1    0.006
        gb|CY033355.1|  Influenza A virus (A/American wigeon/Californi...  44.1    0.006
        gb|CY033339.1|  Influenza A virus (A/northern shoveler/Califor...  44.1    0.006
        gb|EU871841.1|  Influenza A virus (A/green-winged teal/LA/9GW/...  44.1    0.006
        gb|EU871881.1|  Influenza A virus (A/mallard/MN/160/1999(H4N6)...  44.1    0.006
        gb|EU871897.1|  Influenza A virus (A/mallard/MN/323/1999(H4N8)...  44.1    0.006
        gb|EU871911.1|  Influenza A virus (A/mallard/MN/479/2000(H5N3)...  44.1    0.006
        gb|EU743024.1|  Influenza A virus (A/chicken/NJ/17169/1993(H5N...  44.1    0.006
        gb|EU743278.1|  Influenza A virus (A/turkey/TX/1-40-82/1982(H5...  44.1    0.006
        gb|EU742966.1|  Influenza A virus (A/chicken/PA/19241/1997(H7N...  44.1    0.006
        gb|EU743032.1|  Influenza A virus (A/chicken/NY/14009/1993(H5N...  44.1    0.006
        gb|EU743103.1|  Influenza A virus (A/chicken/FL/25717/1993(H5N...  44.1    0.006
        gb|EU743111.1|  Influenza A virus (A/rhea/TX/39923/1993(H5N2))...  44.1    0.006
        gb|EU743172.1|  Influenza A virus (A/turkey/SD/7034/1986(H1N1)...  44.1    0.006
        gb|EU743200.1|  Influenza A virus (A/chicken/NY/11602-12/1998(...  44.1    0.006
        gb|EU743207.1|  Influenza A virus (A/guinea fowl/NJ/8848-18/19...  44.1    0.006
        gb|EU743222.1|  Influenza A virus (A/environment/NY/19019-6/19...  44.1    0.006
        gb|EU743298.1|  Influenza A virus (A/mallard/WI/42/1975(H5N2))...  44.1    0.006
        gb|EU743311.1|  Influenza A virus (A/blue winged teal/LA/B228/...  44.1    0.006
        gb|EU743462.1|  Influenza A virus (A/mallard/MN/42/2000(H11N9)...  44.1    0.006
        gb|EU743521.1|  Influenza A virus (A/mallard/MN/330/1999(H3N1)...  44.1    0.006
        gb|EU743541.1|  Influenza A virus (A/mallard/MN/259/1999(H3N6)...  44.1    0.006
        gb|EU743565.1|  Influenza A virus (A/pintail/MN/479/1999(H3N6)...  44.1    0.006
        gb|EU743038.1|  Influenza A virus (A/emu/TX/39924/1993(H5N2)) ...  44.1    0.006
        gb|EU743068.1|  Influenza A virus (A/turkey/MN/10734-2/1995(H5...  44.1    0.006
        gb|EU743096.1|  Influenza A virus (A/chicken/PA/13609/1993(H5N...  44.1    0.006
        gb|EU743303.1|  Influenza A virus (A/mallard/WI/169/1975(H5N3)...  44.1    0.006
        gb|EU743527.1|  Influenza A virus (A/mallard/MN/351/1999(H3N1)...  44.1    0.006
        gb|EU743050.1|  Influenza A virus (A/pheasant/NJ/1355/1998(H5N...  44.1    0.006
        gb|EU743226.1|  Influenza A virus (A/chicken/NY/51375/2000(H5N...  44.1    0.006
        gb|CY032923.1|  Influenza A virus (A/ring-necked duck/Californ...  44.1    0.006
        gb|CY032883.1|  Influenza A virus (A/northern shoveler/Califor...  44.1    0.006
        gb|CY032872.1|  Influenza A virus (A/mallard duck/Minnesota/Sg...  44.1    0.006
        gb|CY032870.1|  Influenza A virus (A/mallard duck/Minnesota/Sg...  44.1    0.006
        gb|CY032855.1|  Influenza A virus (A/blue-winged teal/Minnesot...  44.1    0.006
        gb|CY032817.1|  Influenza A virus (A/mallard duck/Minnesota/Sg...  44.1    0.006
        gb|CY032773.1|  Influenza A virus (A/mallard duck/Minnesota/Sg...  44.1    0.006
        gb|CY032753.1|  Influenza A virus (A/blue-winged teal/Minnesot...  44.1    0.006
        gb|CY032749.1|  Influenza A virus (A/blue-winged teal/Minnesot...  44.1    0.006
        gb|CY032743.1|  Influenza A virus (A/blue-winged teal/Minnesot...  44.1    0.006
        gb|CY032741.1|  Influenza A virus (A/blue-winged teal/Minnesot...  44.1    0.006
        gb|CY032739.1|  Influenza A virus (A/blue-winged teal/Minnesot...  44.1    0.006
        gb|CY032737.1|  Influenza A virus (A/blue-winged teal/Minnesot...  44.1    0.006
        gb|CY032735.1|  Influenza A virus (A/blue-winged teal/Minnesot...  44.1    0.006
        gb|CY032719.1|  Influenza A virus (A/northern pintail/Californ...  44.1    0.006
        gb|CY032711.1|  Influenza A virus (A/northern shoveler/Califor...  44.1    0.006
        gb|CY032703.1|  Influenza A virus (A/American wigeon/Californi...  44.1    0.006
        gb|CY032687.1|  Influenza A virus (A/northern shoveler/Califor...  44.1    0.006
        gb|CY032663.1|  Influenza A virus (A/gadwall/California/HKWF10...  44.1    0.006
        gb|EU735807.1|  Influenza A virus (A/quail/IN/38685/1993(H1N1)...  44.1    0.006
        gb|EU742633.1|  Influenza A virus (A/pheasant/NJ/9804568/1998(...  44.1    0.006
        gb|EU742657.1|  Influenza A virus (A/duck/NY/6874/1978(H3N2)) ...  44.1    0.006
        gb|CY031041.1|  Influenza A virus (A/environment/Maryland/1189...  44.1    0.006
        gb|EF597425.2|  Influenza A virus (A/migratory duck/Hong Kong/...  44.1    0.006
        gb|CY031019.1|  Influenza A virus (A/turkey/Minnesota/1729/198...  44.1    0.006
        gb|CY031017.1|  Influenza A virus (A/turkey/Minnesota/1630/198...  44.1    0.006
        gb|CY031015.1|  Influenza A virus (A/turkey/Minnesota/500/1978...  44.1    0.006
        gb|CY031013.1|  Influenza A virus (A/turkey/Minnesota/1812/198...  44.1    0.006
        gb|CY031009.1|  Influenza A virus (A/turkey/Minnesota/1700/198...  44.1    0.006
        gb|CY029846.1|  Influenza A virus (A/muscovy duck/New York/212...  44.1    0.006
        gb|EF530048.1|  Influenza A virus (A/mallard/ON/499/2005(H5N1)...  44.1    0.006
        gb|EF210571.1|  Influenza A virus (A/mallard/Manitoba/458/2005...  44.1    0.006
        gb|EU182308.1|  Influenza A virus (A/turkey/MN/3397-3/1992(H5N...  44.1    0.006
        gb|EU182252.1|  Influenza A virus (A/chicken/CA/431/2000(H6N2)...  44.1    0.006
        gb|EU182321.1|  Influenza A virus (A/chicken/NY/13237-6/1998(H...  44.1    0.006
        gb|EU182317.1|  Influenza A virus (A/chicken/NY/14677-13/1998(...  44.1    0.006
        gb|CY025082.1|  Influenza A virus (A/chicken/Victoria/224/1992...  44.1    0.006
        gb|EU084955.1|  Influenza A virus (A/Avian/NY/31588-3/2000(H5N...  44.1    0.006
        gb|EU084947.1|  Influenza A virus (A/chukar/MN/14591-7/1998(H5...  44.1    0.006
        gb|EU084938.1|  Influenza A virus (A/Duck/NY/44018-1/2000(H5N2...  44.1    0.006
        gb|EU084934.1|  Influenza A virus (A/Avian/NY/53726/2000(H5N2)...  44.1    0.006
        gb|EU026115.1|  Influenza A virus (A/duck/NJ/7717-70/1995(H1N1...  44.1    0.006
        gb|EU026107.1|  Influenza A virus (A/duck/NY/13152-13/1994(H1N...  44.1    0.006
        gb|EU026087.1|  Influenza A virus (A/mallard/MD/403/2002(H1N1)...  44.1    0.006
        gb|EF597401.1|  Influenza A virus (A/duck/Hong Kong/698/1979(H...  44.1    0.006
        gb|EF597399.1|  Influenza A virus (A/duck/Hong Kong/342/1978(H...  44.1    0.006
        gb|EF597397.1|  Influenza A virus (A/goose/Hong Kong/23/1978(H...  44.1    0.006
        gb|CY022610.1|  Influenza A virus (A/green-winged teal/Ohio/12...  44.1    0.006
        gb|EF554802.1|  Influenza A virus (A/mallard duck/Minnesota/19...  44.1    0.006
        gb|CY021874.1|  Influenza A virus (A/green-winged teal/Ohio/34...  44.1    0.006
        gb|CY021682.1|  Influenza A virus (A/canada goose/Ohio/127/198...  44.1    0.006
        gb|CY021658.1|  Influenza A virus (A/black duck/Ohio/161/1999(...  44.1    0.006
        gb|CY021650.1|  Influenza A virus (A/green-winged teal/Ohio/39...  44.1    0.006
        gb|CY021642.1|  Influenza A virus (A/mallard/Delaware/418/2005...  44.1    0.006
        gb|CY021626.1|  Influenza A virus (A/mallard/Ohio/421/1987(H7N...  44.1    0.006
        gb|CY021618.1|  Influenza A virus (A/black duck/Ohio/239/1986(...  44.1    0.006
        gb|CY021578.1|  Influenza A virus (A/mallard/Ohio/81/1986(Mixe...  44.1    0.006
        gb|CY021474.1|  Influenza A virus (A/mallard/Maryland/1124/200...  44.1    0.006
        gb|CY020882.1|  Influenza A virus (A/pintail/Alaska/49/2005(H3...  44.1    0.006
        gb|CY021386.1|  Influenza A virus (A/turkey/Italy/1980(H5N2)) ...  44.1    0.006
        gb|CY021354.1|  Influenza A virus (A/green-winged teal/Ohio/12...  44.1    0.006
        gb|CY021338.1|  Influenza A virus (A/mallard/Maryland/1241/200...  44.1    0.006
        gb|CY021330.1|  Influenza A virus (A/green-winged teal/Ohio/13...  44.1    0.006
        gb|CY021322.1|  Influenza A virus (A/green-winged teal/Ohio/12...  44.1    0.006
        gb|CY021250.1|  Influenza A virus (A/american black duck/Ohio/...  44.1    0.006
        gb|CY021242.1|  Influenza A virus (A/green-winged teal/Ohio/13...  44.1    0.006
        gb|CY021210.1|  Influenza A virus (A/mallard/Ohio/123/1989(H6N...  44.1    0.006
        gb|CY021202.1|  Influenza A virus (A/green-winged teal/Ohio/80...  44.1    0.006
        gb|CY021186.1|  Influenza A virus (A/mallard/Ohio/1851/2005(H1...  44.1    0.006
        gb|CY021178.1|  Influenza A virus (A/green-winged teal/Ohio/18...  44.1    0.006
        gb|CY021170.1|  Influenza A virus (A/green-winged teal/Ohio/17...  44.1    0.006
        gb|CY021138.1|  Influenza A virus (A/mallard/Ohio/399/1987(H11...  44.1    0.006
        gb|CY020994.1|  Influenza A virus (A/mallard/Ohio/81/1986(H6N2...  44.1    0.006
        gb|CY020978.1|  Influenza A virus (A/mallard/Ohio/115/1989(H6N...  44.1    0.006
        gb|CY020954.1|  Influenza A virus (A/mallard/Ohio/209/1998(H11...  44.1    0.006
        gb|CY017416.2|  Influenza A virus (A/mallard/Ohio/424/1988(H3N...  44.1    0.006
        gb|CY020938.1|  Influenza A virus (A/northern shoveler/Ohio/35...  44.1    0.006
        gb|CY020930.1|  Influenza A virus (A/mallard/Ohio/122/1989(H10...  44.1    0.006
        gb|CY020922.1|  Influenza A virus (A/environment/Ohio/1007/200...  44.1    0.006
        gb|CY020914.1|  Influenza A virus (A/common scoter/Maryland/29...  44.1    0.006
        gb|CY020866.1|  Influenza A virus (A/blue-winged teal/Ohio/907...  44.1    0.006
        gb|CY020850.1|  Influenza A virus (A/pintail/Ohio/73/1989(H6N2...  44.1    0.006
        gb|CY020842.1|  Influenza A virus (A/mallard/Ohio/653/2002(H6N...  44.1    0.006
        gb|CY020834.1|  Influenza A virus (A/mallard/Ohio/648/2002(H6N...  44.1    0.006
        gb|CY020826.1|  Influenza A virus (A/mallard/Maryland/172/2002...  44.1    0.006
        gb|CY020794.1|  Influenza A virus (A/mallard/Ohio/668/2002(H4N...  44.1    0.006
        gb|CY020786.1|  Influenza A virus (A/mallard/Ohio/666/2002(H6N...  44.1    0.006
        gb|CY020762.1|  Influenza A virus (A/mallard/Ohio/649/2002(H3N...  44.1    0.006
        gb|CY020746.1|  Influenza A virus (A/mallard/Ohio/654/2002(H3N...  44.1    0.006
        gb|CY011061.2|  Influenza A virus (A/mallard/Ohio/275/1987(H4N...  44.1    0.006
        gb|CY018922.1|  Influenza A virus (A/snow goose/Maryland/364/2...  44.1    0.006
        gb|CY018914.1|  Influenza A virus (A/snow goose/Maryland/353/2...  44.1    0.006
        gb|CY018906.1|  Influenza A virus (A/blue-winged teal/Ohio/658...  44.1    0.006
        gb|CY018020.1|  Influenza A virus (A/mallard/Ohio/102/1986(H11...  44.1    0.006
        gb|CY018012.1|  Influenza A virus (A/green-winged teal/Ohio/20...  44.1    0.006
        gb|CY017850.1|  Influenza A virus (A/green-winged teal/Ohio/81...  44.1    0.006
        gb|CY017842.1|  Influenza A virus (A/green-winged teal/Ohio/46...  44.1    0.006
        gb|CY017786.1|  Influenza A virus (A/mallard/Ohio/99/1989(H10N...  44.1    0.006
        gb|CY017746.1|  Influenza A virus (A/pintail/Alaska/310/2005(H...  44.1    0.006
        gb|CY017738.1|  Influenza A virus (A/pintail/Alaska/102/2005(H...  44.1    0.006
        gb|CY017714.1|  Influenza A virus (A/mallard/Ohio/156/1990(H3N...  44.1    0.006
        gb|CY017706.1|  Influenza A virus (A/mallard/Ohio/324/1988(H4N...  44.1    0.006
        dbj|AB286878.1|  Influenza A virus (A/duck/Hokkaido/120/2001(H...  44.1    0.006
        dbj|AB286118.1|  Influenza A virus (A/duck/Pennsylvania/10218/...  44.1    0.006
        gb|CY016185.1|  Influenza A virus (A/pintail/Alaska/211/2005(H...  44.1    0.006
        gb|DQ997080.1|  Influenza A virus (A/swine/Anhui/cb/2004(H5N1)...  44.1    0.006
        gb|DQ997160.1|  Influenza A virus (A/chicken/Hubei/wo/2003(H5N...  44.1    0.006
        gb|CY016624.1|  Influenza A virus (A/mallard/Ohio/64/1989(H6N8...  44.1    0.006
        gb|CY016400.1|  Influenza A virus (A/mallard/Ohio/264/1986(H3N...  44.1    0.006
        gb|DQ997321.1|  Influenza A virus (A/chicken/Jilin/hj/2003(H5N...  44.1    0.006
        gb|DQ997223.1|  Influenza A virus (A/chicken/Henan/wu/2004(H5N...  44.1    0.006
        gb|CY016177.1|  Influenza A virus (A/green-winged teal/Ohio/59...  44.1    0.006
        gb|CY016169.1|  Influenza A virus (A/green-winged teal/Ohio/86...  44.1    0.006
        gb|CY016137.1|  Influenza A virus (A/pintail/Ohio/351/1987(H6N...  44.1    0.006
        dbj|AB274965.1|  Influenza A virus (A/Duck/Hokkaido/8/80 (H3N8...  44.1    0.006
        gb|CY015497.1|  Influenza A virus (A/mallard/Alaska/256/2005(H...  44.1    0.006
        gb|CY015489.1|  Influenza A virus (A/mallard/Ohio/170/1999(H6N...  44.1    0.006
        gb|CY015481.1|  Influenza A virus (A/mallard/Ohio/249/1998(H6N...  44.1    0.006
        gb|CY013252.1|  Influenza A virus (A/mallard/Ohio/338/1986(H4N...  44.1    0.006
        gb|CY015472.1|  Influenza A virus (A/mallard/Ohio/83/1986(H4N6...  44.1    0.006
        gb|CY015175.1|  Influenza A virus (A/duck/Alaska/702/1991(H8N2...  44.1    0.006
        gb|CY015150.1|  Influenza A virus (A/shorebird/Delaware/224/19...  44.1    0.006
        gb|CY015132.1|  Influenza A virus (A/ruddy turnstone/Delaware/...  44.1    0.006
        gb|CY015011.1|  Influenza A virus (A/Canada/rv504/2004(H7N3)) ...  44.1    0.006
        gb|CY015003.1|  Influenza A virus (A/environment/Canada/av41/2...  44.1    0.006
        gb|CY014973.1|  Influenza A virus (A/mallard duck/New York/686...  44.1    0.006
        gb|CY014958.1|  Influenza A virus (A/mallard duck/New York/90/...  44.1    0.006
        gb|CY014950.1|  Influenza A virus (A/wood duck/New York/60/198...  44.1    0.006
        gb|CY014934.1|  Influenza A virus (A/mallard duck/New York/194...  44.1    0.006
        gb|CY014914.1|  Influenza A virus (A/chicken/New York/28263/19...  44.1    0.006
        gb|CY014893.1|  Influenza A virus (A/duck/New York/16873/1999(...  44.1    0.006
        gb|CY014885.1|  Influenza A virus (A/chicken/New York/14677-13...  44.1    0.006
        gb|CY014877.1|  Influenza A virus (A/black duck/New York/184/1...  44.1    0.006
        gb|CY014862.1|  Influenza A virus (A/mallard duck/New York/180...  44.1    0.006
        gb|CY014854.1|  Influenza A virus (A/mallard duck/New York/189...  44.1    0.006
        gb|CY014834.1|  Influenza A virus (A/guinea fowl/New York/2022...  44.1    0.006
        gb|CY014811.1|  Influenza A virus (A/mallard duck/Tennessee/11...  44.1    0.006
        gb|CY014803.1|  Influenza A virus (A/turkey/Minnesota/1012/199...  44.1    0.006
        gb|CY014797.1|  Influenza A virus (A/turkey/Minnesota/3/1992(H...  44.1    0.006
        gb|CY014791.1|  Influenza A virus (A/turkey/Minnesota/1/1988(H...  44.1    0.006
        gb|CY014776.1|  Influenza A virus (A/turkey/Minnesota/501/1978...  44.1    0.006
        gb|CY014730.1|  Influenza A virus (A/duck/Minnesota/1525/1981(...  44.1    0.006
        gb|CY014714.1|  Influenza A virus (A/duck/Germany/1215/1973(H2...  44.1    0.006
        gb|CY014606.1|  Influenza A virus (A/mallard duck/Astrakhan/26...  44.1    0.006
        gb|CY014589.1|  Influenza A virus (A/mallard/Alberta/34/2001(H...  44.1    0.006
        gb|CY014553.1|  Influenza A virus (A/mallard duck/Alberta/331/...  44.1    0.006
        gb|CY014566.1|  Influenza A virus (A/mallard/Alberta/267/1996(...  44.1    0.006
        gb|CY013868.1|  Influenza A virus (A/green-winged teal/Ohio/17...  44.1    0.006
        gb|CY013268.1|  Influenza A virus (A/pintail/Alaska/53/2005(H3...  44.1    0.006
        gb|CY013260.1|  Influenza A virus (A/pintail/Ohio/226/1998(H6N...  44.1    0.006
        gb|DQ376830.1|  Influenza A virus (A/duck/Kingmen/E322/04(H6N2...  44.1    0.006
        gb|CY012845.1|  Influenza A virus (A/pintail/Alaska/20/2005(H1...  44.1    0.006
        gb|CY012837.1|  Influenza A virus (A/pintail/Ohio/294/1988(H6N...  44.1    0.006
        gb|CY011253.1|  Influenza A virus (A/wigeon/Ohio/379/1988(H5N2...  44.1    0.006
        gb|CY012813.1|  Influenza A virus (A/mallard/Ohio/298/1987(H4N...  44.1    0.006
        gb|CY012805.1|  Influenza A virus (A/mallard/Ohio/171/1990(H1N...  44.1    0.006
        gb|DQ366305.1|  Influenza A virus (A/duck/Vietnam/1/2005(H5N1)...  44.1    0.006
        gb|AY724260.1|  Influenza A virus (A/chicken/Hebei/1/2002(H7N2...  44.1    0.006
        gb|AY724254.1|  Influenza A virus (A/African starling/England-...  44.1    0.006
        gb|DQ017512.1|  Influenza A virus (A/mallard/Alberta/24/01(H7N...  44.1    0.006
        gb|DQ017508.1|  Influenza A virus (A/mallard/Alberta/24/01(H7N...  44.1    0.006
        gb|AY616764.1|  Influenza A virus (A/chicken/British Columbia/...  44.1    0.006
        gb|AY648292.1|  Influenza A virus (A/GSC_chicken_B/British Col...  44.1    0.006
        gb|AY646083.1|  Influenza A virus (A/chicken/British Columbia/...  44.1    0.006
        gb|AF257207.1|  Influenza A virus (A/Hong Kong/507/97(H5N1)) R...  44.1    0.006
        gb|AF257206.1|  Influenza A virus (A/Hong Kong/503/97(H5N1)) R...  44.1    0.006
        gb|AF257205.1|  Influenza A virus (A/Hong Kong/491/97(H5N1)) R...  44.1    0.006
        gb|AF257203.1|  Influenza A virus (A/Hong Kong/485/97(H5N1)) R...  44.1    0.006
        gb|AF257202.1|  Influenza A virus (A/Hong Kong/97/98(H5N1)) RN...  44.1    0.006
        gb|AF257201.1|  Influenza A virus (A/Hong Kong/542/97(H5N1)) R...  44.1    0.006
        gb|AF257200.1|  Influenza A virus (A/Hong Kong/538/97(H5N1)) R...  44.1    0.006
        gb|AF257199.1|  Influenza A Virus (A/Hong Kong/532/97(H5N1)) R...  44.1    0.006
        gb|AF257196.1|  Influenza A virus (A/Hong Kong/486/97(H5N1)) R...  44.1    0.006
        gb|AF257194.1|  Influenza A virus (A/Hong Kong/482/97(H5N1)) R...  44.1    0.006
        gb|AF257193.1|  Influenza A virus (A/Hong Kong/481/97(H5N1)) R...  44.1    0.006
        gb|AF508664.1|  Influenza A virus (A/Chicken/Pakistan/5/99(H9N...  44.1    0.006
        gb|AF457716.1|  Influenza A virus (A/chicken/California/1002a/...  44.1    0.006
        gb|AF457707.1|  Influenza A virus (A/chicken/California/139/01...  44.1    0.006
        gb|AF457699.1|  Influenza A virus (A/chicken/California/431/00...  44.1    0.006
        gb|AF457691.1|  Influenza A virus (A/chicken/California/465/00...  44.1    0.006
        gb|AF457674.1|  Influenza A virus (A/chicken/California/905/01...  44.1    0.006
        gb|AF523459.1|  Influenza A virus (A/Duck/Hong Kong/86/76(H9N2...  44.1    0.006
        gb|AY950266.1|  Influenza A virus (A/Chicken/Henan/210/2004 (H...  44.1    0.006
        gb|CY004754.1|  Influenza A virus (A/mallard/Alberta/300/1977(...  44.1    0.006
        gb|CY004431.1|  Influenza A virus (A/red knot/Delaware/2561/87...  44.1    0.006
        gb|CY003860.1|  Influenza A virus (A/pintail/Alberta/293/1977(...  44.1    0.006
        gb|CY003852.1|  Influenza A virus (A/mallard/Alberta/77/1977(H...  44.1    0.006
        emb|AJ289874.1|  Influenza A virus (A/Hong Kong/156/97(H5N1)) ...  44.1    0.006
        gb|DQ351869.1|  Influenza A virus (A/chicken/Hebei/718/2001(H5...  44.1    0.006
        gb|CY005622.1|  Influenza A virus (A/dk/Hong Kong/293/1978(H7N...  44.1    0.006
        gb|CY005587.1|  Influenza A virus (A/goose/Hong Kong/23/1978(H...  44.1    0.006
        gb|CY005557.1|  Influenza A virus (A/duck/Hong Kong/7/1975(H3N...  44.1    0.006
        gb|CY005355.1|  Influenza A virus (A/green-winged teal/ALB/199...  44.1    0.006
        gb|CY005309.1|  Influenza A virus (A/mallard/ALB/124/1991(H11N...  44.1    0.006
        gb|CY005278.1|  Influenza A virus (A/mallard duck/ALB/797/1983...  44.1    0.006
        gb|CY005229.1|  Influenza A virus (A/mallard/ALB/5/1995(H10N1)...  44.1    0.006
        gb|CY005192.1|  Influenza A virus (A/blue-winged teal/ALB/778/...  44.1    0.006
        gb|CY005158.1|  Influenza A virus (A/mallard/ALB/17/1991(H9N2)...  44.1    0.006
        gb|CY005151.1|  Influenza A virus (A/mallard/Alberta/11/1991(H...  44.1    0.006
        gb|CY005131.1|  Influenza A virus (A/ruddy turnstone/DE/2731/1...  44.1    0.006
        gb|CY005124.1|  Influenza A virus (A/laughing gull/DE/2718/198...  44.1    0.006
        gb|CY005118.1|  Influenza A virus (A/ruddy turnstone/DE/2576/1...  44.1    0.006
        gb|CY005069.1|  Influenza A virus (A/laughing gull/DE/2838/198...  44.1    0.006
        gb|CY005032.1|  Influenza A virus (A/mallard duck/ALB/279/1977...  44.1    0.006
        gb|CY005027.1|  Influenza A virus (A/widgeon/ALB/284/1977(H7N3...  44.1    0.006
        gb|CY005020.1|  Influenza A virus (A/blue-winged teal/ALB/295/...  44.1    0.006
        gb|CY005013.1|  Influenza A virus (A/mallard duck/ALB/224/1977...  44.1    0.006
        gb|CY004992.1|  Influenza A virus (A/pintail duck/Alberta/114/...  44.1    0.006
        gb|CY004986.1|  Influenza A virus (A/mallard/Alberta/283/1977(...  44.1    0.006
        gb|CY004965.1|  Influenza A virus (A/mallard duck/ALB/291/1977...  44.1    0.006
        gb|CY004908.1|  Influenza A virus (A/blue-winged teal/ALB/293/...  44.1    0.006
        gb|CY004865.1|  Influenza A virus (A/ruddy turnstone/DE/512/19...  44.1    0.006
        gb|CY004835.1|  Influenza A virus (A/mallard duck/ALB/630/1984...  44.1    0.006
        gb|CY004822.1|  Influenza A virus (A/ruddy turnstone/NJ/47/198...  44.1    0.006
        gb|CY004781.1|  Influenza A virus (A/pintail duck/ALB/220/1977...  44.1    0.006
        gb|CY004774.1|  Influenza A virus (A/mallard duck/ALB/161/1977...  44.1    0.006
        gb|CY004760.1|  Influenza A virus (A/mallard duck/ALB/210/1977...  44.1    0.006
        gb|CY004740.1|  Influenza A virus (A/redhead duck/ALB/74/1977(...  44.1    0.006
        gb|CY004654.1|  Influenza A virus (A/mallard duck/ALB/635/1983...  44.1    0.006
        gb|CY004618.1|  Influenza A virus (A/pintail duck/ALB/462/1979...  44.1    0.006
        gb|CY004565.1|  Influenza A virus (A/herring gull/DE/712/1988(...  44.1    0.006
        gb|CY004455.1|  Influenza A virus (A/herring gull/NJ/782/1986(...  44.1    0.006
        gb|CY004417.1|  Influenza A virus (A/knot/DE/2552/1987(H9N5)) ...  44.1    0.006
        gb|CY004396.1|  Influenza A virus (A/herring gull/NJ/402/1989(...  44.1    0.006
        gb|CY004343.1|  Influenza A virus (A/pintail/Alberta/49/2003(H...  44.1    0.006
        gb|CY004126.1|  Influenza A virus (A/mallard duck/ALB/676/1979...  44.1    0.006
        gb|CY003899.1|  Influenza A virus (A/herring gull/DE/475/1986(...  44.1    0.006
        gb|CY005906.1|  Influenza A virus (A/domestic duck/MN/1086/198...  44.1    0.006
        gb|CY005825.1|  Influenza A virus (A/shearwater/Australia/1/19...  44.1    0.006
        gb|CY005734.1|  Influenza A virus (A/duck/NZL/31/1976(H4N6)) s...  44.1    0.006
        gb|CY005650.1|  Influenza A virus (A/duck/Hong Kong/562/1979(H...  44.1    0.006
        gb|CY005616.1|  Influenza A virus (A/duck/Hong Kong/d134/1977(...  44.1    0.006
        gb|CY005580.1|  Influenza A virus (A/duck/Hong Kong/342/1978(H...  44.1    0.006
        gb|CY005418.1|  Influenza A virus (A/semi-palmated sandpiper/B...  44.1    0.006
        gb|CY005400.1|  Influenza A virus (A/mallard duck/AST/266/1982...  44.1    0.006
        gb|CY005390.1|  Influenza A virus (A/herring gull/DE/660/1988(...  44.1    0.006
        gb|CY005385.1|  Influenza A virus (A/laughing gull/DE/554/1988...  44.1    0.006
        gb|CY005374.1|  Influenza A virus (A/shorebird/NJ/840/1986(H13...  44.1    0.006
        gb|CY005315.1|  Influenza A virus (A/mallard/ALB/126/1991(H11N...  44.1    0.006
        gb|CY005302.1|  Influenza A virus (A/ruddy turnstone/NJ/842/19...  44.1    0.006
        gb|CY005284.1|  Influenza A virus (A/ruddy turnstone/Delaware/...  44.1    0.006
        gb|CY005272.1|  Influenza A virus (A/mallard duck/ALB/763/1983...  44.1    0.006
        gb|CY005268.1|  Influenza A virus (A/redhead duck/ALB/357/1983...  44.1    0.006
        gb|CY005216.1|  Influenza A virus (A/redhead duck/ALB/767/1984...  44.1    0.006
        gb|CY005197.1|  Influenza A virus (A/mallard duck/ALB/742/1981...  44.1    0.006
        gb|CY005036.1|  Influenza A virus (A/blue-winged teal/ALB/221/...  44.1    0.006
        gb|CY005000.1|  Influenza A virus (A/mallard duck/ALB/7/1987(H...  44.1    0.006
        gb|CY004974.1|  Influenza A virus (A/herring gull/NJ/406/1989(...  44.1    0.006
        gb|CY004944.1|  Influenza A virus (A/mallard/Alberta/30/2001(H...  44.1    0.006
        gb|CY004916.1|  Influenza A virus (A/mallard/ALB/49/1995(H4N6)...  44.1    0.006
        gb|CY004889.1|  Influenza A virus (A/blue-winged teal/ALB/67/1...  44.1    0.006
        gb|CY004872.1|  Influenza A virus (A/knot/DE/541/1988(H4N6)) s...  44.1    0.006
        gb|CY004828.1|  Influenza A virus (A/laughing gull/NJ/72/1985(...  44.1    0.006
        gb|CY004767.1|  Influenza A virus (A/pintail duck/ALB/159/1977...  44.1    0.006
        gb|CY004719.1|  Influenza A virus (A/mallard duck/ALB/299/1977...  44.1    0.006
        gb|CY004707.1|  Influenza A virus (A/mallard/Alberta/156/2001(...  44.1    0.006
        gb|CY004697.1|  Influenza A virus (A/mallard/ALB/118/1995(H3N5...  44.1    0.006
        gb|CY004675.1|  Influenza A virus (A/blue-winged teal/ALB/569/...  44.1    0.006
        gb|CY004667.1|  Influenza A virus (A/mallard duck/ALB/525/1985...  44.1    0.006
        gb|CY004597.1|  Influenza A virus (A/mallard duck/ALB/127/1977...  44.1    0.006
        gb|CY004528.1|  Influenza A virus (A/mallard duck/ALB/294/1987...  44.1    0.006
        gb|CY004520.1|  Influenza A virus (A/coot/ALB/134/1987(H6N2)) ...  44.1    0.006
        gb|CY004512.1|  Influenza A virus (A/mallard/ALB/201/1998(H1N1...  44.1    0.006
        gb|CY004487.1|  Influenza A virus (A/pintail duck/ALB/238/1979...  44.1    0.006
        gb|CY004294.1|  Influenza A virus (A/mallard duck/ALB/65/1976(...  44.1    0.006
        gb|CY004279.1|  Influenza A virus (A/mallard/Alberta/154/2003(...  44.1    0.006
        gb|CY004271.1|  Influenza A virus (A/mallard/ALB/206/1996(H6N8...  44.1    0.006
        gb|CY004263.1|  Influenza A virus (A/pintail/ALB/179/1993(H6N1...  44.1    0.006
        gb|CY004247.1|  Influenza A virus (A/mallard duck/ALB/253/1990...  44.1    0.006
        gb|CY004239.1|  Influenza A virus (A/mallard duck/ALB/191/1990...  44.1    0.006
        gb|CY004231.1|  Influenza A virus (A/mallard duck/ALB/155/1990...  44.1    0.006
        gb|CY004215.1|  Influenza A virus (A/pintail duck/ALB/111/1985...  44.1    0.006
        gb|CY004140.1|  Influenza A virus (A/pintail duck/ALB/1298/197...  44.1    0.006
        gb|CY004134.1|  Influenza A virus (A/mallard duck/ALB/1151/197...  44.1    0.006
        gb|CY004119.1|  Influenza A virus (A/pintail duck/ALB/628/1979...  44.1    0.006
        gb|CY004105.1|  Influenza A virus (A/pintail duck/ALB/1360/197...  44.1    0.006
        gb|CY004099.1|  Influenza A virus (A/laughing gull/NJ/276/1989...  44.1    0.006
        gb|CY004059.1|  Influenza A virus (A/mallard duck/ALB/761/1978...  44.1    0.006
        gb|CY004016.1|  Influenza A virus (A/blue-winged teal/ALB/48/1...  44.1    0.006
        gb|CY003912.1|  Influenza A virus (A/herring gull/DE/698/1988(...  44.1    0.006
        gb|CY003904.1|  Influenza A virus (A/herring gull/DE/670/1988(...  44.1    0.006
        gb|CY003957.1|  Influenza A virus (A/mallard/ALB/202/1996(H2N5...  44.1    0.006
        gb|CY003919.1|  Influenza A virus (A/herring gull/DE/703/1988(...  44.1    0.006
        gb|CY003876.1|  Influenza A virus (A/mallard duck/ALB/884/1984...  44.1    0.006
        gb|AF285890.1|AF285890  Influenza A virus (A/Swine/Ontario/019...  44.1    0.006
        gb|AF250478.1|AF250478  Influenza A virus (A/Teal/Hong Kong/W3...  44.1    0.006
        gb|AF115295.1|AF115295  Influenza A virus (A/Hong Kong/486/97(...  44.1    0.006
        gb|AF115294.1|AF115294  Influenza A virus (A/Hong Kong/481/97(...  44.1    0.006
        gb|AF084270.1|AF084270  Influenza A virus (A/HongKong/485/97(H...  44.1    0.006
        gb|AF084268.1|AF084268  Influenza A virus (A/HongKong/482/97(H...  44.1    0.006
        gb|AF084267.1|AF084267  Influenza A virus (A/HongKong/156/97(H...  44.1    0.006
        gb|AF046095.1|  Influenza A virus (A/Hong Kong/156/97(H5N1)) p...  44.1    0.006
        gb|AF046087.1|  Influenza A virus (A/Chicken/Hong Kong/220/97 ...  44.1    0.006
        gb|DQ266099.1|  Influenza A virus SC35M polymerase subunit PA ...  44.1    0.006
        dbj|AB049158.1|  Influenza A virus (A/parakeet/Narita/92A/98(H...  44.1    0.006
        dbj|AB049157.1|  Influenza A virus (A/parakeet/Chiba/1/97(H9N2...  44.1    0.006
        emb|AJ291402.1|  Influenza A virus (A/Hong Kong/532/97(H5N1)) ...  44.1    0.006
        emb|AJ291397.1|  Influenza A virus (A/Chicken/Pakistan/2/99 (H...  44.1    0.006
        gb|AF098611.1|AF098611  Influenza A virus (A/Goose/Hong Kong/w...  44.1    0.006
        gb|AF098610.1|AF098610  Influenza A virus (A/Duck/Hong Kong/y2...  44.1    0.006
        gb|AF098609.1|AF098609  Influenza A virus (A/Duck/Hong Kong/p4...  44.1    0.006
        gb|AF098608.1|AF098608  Influenza A virus (A/Chicken/Hong Kong...  44.1    0.006
        gb|AF098607.1|AF098607  Influenza A virus (A/Chicken/Hong Kong...  44.1    0.006
        gb|AF098606.1|AF098606  Influenza A virus (A/Chicken/Hong Kong...  44.1    0.006
        gb|AF098605.1|AF098605  Influenza A virus (A/Chicken/Hong Kong...  44.1    0.006
        gb|AF098604.1|AF098604  Influenza A virus (A/Chicken/Hong Kong...  44.1    0.006
        emb|AJ243994.1|  Influenza A virus (STRAIN A/MALLARD/NEW YORK/...  44.1    0.006
        gb|M26081.1|FLASH82PA  Influenza A virus (A/swine/Hong Kong/12...  44.1    0.006
        gb|M26085.1|FLAPA79PA  Influenza A virus (A/pintail/Alberta/11...  44.1    0.006
        gb|M26083.1|FLADH80PA  Influenza A virus (A/duck/Hokkaido/8/19...  44.1    0.006

        Comment


        • Re: July San Paolo Sequence Released

          Originally posted by niman View Post
          None of the initial sequences from Argentina have V252M

          7785-Argentina-2009-S4-HA-4
          7937-Argentina-2009-S4-HA-11f
          7953-Argentina-2009-S4-HA-16
          7967-Argentina-2009-S4-HA-1
          7980-Argentina-2009-S4-HA-12
          8019-Argentina-2009-S4-HA-2
          8574-Argentina-2009-S4-HA-41
          9576-Argentina-2009-S4-HA-6
          9588-Argentina-2009-S4-HA-5
          9597-Argentina-2009-S4-HA-3
          9711-Argentina-2009-S4-HA-9
          CDC is releasing Argentina sequences at GISAID.

          Comment


          • Re: July San Paolo Sequence Released

            A/Argentina/7649/2009

            Comment


            • Re: July San Paolo Sequence Released

              Originally posted by niman View Post
              CDC is releasing Argentina sequences at GISAID.
              Do you have access to GISAID Dr. Niman.

              Comment


              • Re: July San Paolo Sequence Released

                Most recent release by the CDC is 8019 (collected June 18)

                Comment


                • Re: July San Paolo Sequence Released

                  I assume that ** sequences at GISAID are usually being transferred
                  to genbank within a few days (?)
                  I'm interested in expert panflu damage estimates
                  my current links: http://bit.ly/hFI7H ILI-charts: http://bit.ly/CcRgT

                  Comment


                  • Re: July San Paolo Sequence Released

                    Originally posted by niman View Post
                    A/Argentina/7649/2009
                    Presumably this is a new isolate not previously included in the Columbia database.

                    Comment


                    • Re: July San Paolo Sequence Released

                      Originally posted by Rwilmer View Post
                      Do you have access to GISAID Dr. Niman.
                      Yes, and at least one sequences (not from Agentina) has H274Y.

                      Comment


                      • Re: July San Paolo Sequence Released

                        Originally posted by gsgs View Post
                        I assume that ** sequences at GISAID are usually being transferred
                        to genbank within a few days (?)
                        Ask the CDC.

                        Comment


                        • Re: July San Paolo Sequence Released

                          Originally posted by Mamabird View Post
                          Presumably this is a new isolate not previously included in the Columbia database.
                          Not new (I believe sample numbers are sequential), but not yet released by Columbia.

                          Comment


                          • Re: July San Paolo Sequence Released

                            Originally posted by niman View Post
                            Yes, and at least one sequences (not from Agentina) has H274Y.
                            Collected WELL before Japan and Denmark.

                            Comment


                            • Re: July San Paolo Sequence Released

                              Originally posted by niman View Post
                              Collected WELL before Japan and Denmark.
                              HA travel log

                              gb|GQ414768.1| Influenza A virus (A/Sao Paulo/43812/2009(H1N1... 36.2 0.73
                              gb|GQ377095.1| Influenza A virus (A/California/24/2009(H1N1))... 36.2 0.73
                              gb|GQ359765.1| Influenza A virus (A/Stockholm/31/2009(H1N1)) ... 36.2 0.73
                              gb|GQ292961.1| Influenza A virus (A/Mexico City/22/2009(H1N1)... 36.2 0.73
                              gb|GQ229293.1| Influenza A virus (A/swine/Hong Kong/NS1659/20... 36.2 0.73
                              gb|GQ232085.1| Influenza A virus (A/Guangdong/02/2009(H1N1)) ... 36.2 0.73
                              gb|GQ223435.1| Influenza A virus (A/Guangdong/05/2009(H1N1)) ... 36.2 0.73
                              gb|GQ132144.1| Influenza A virus (A/Canada-ON/RV1529/2009(H1N... 36.2 0.73

                              Comment


                              • Re: July San Paolo Sequence Released

                                Originally posted by niman View Post
                                Collected WELL before Japan and Denmark.
                                Can you tell us when and where?
                                Wotan (pronounced Voton with the ton rhyming with on) - The German Odin, ruler of the Aesir.

                                I am not a doctor, virologist, biologist, etc. I am a layman with a background in the physical sciences.

                                Attempting to blog an nascent pandemic: Diary of a Flu Year

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