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Utah - Bird flu in wild birds, mammals and livestock 2022-2026

Follow-up to post above (#59):

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https://www.aphis.usda.gov/livestoc...pai-detections/hpai-confirmed-cases-livestock
 
Avian flu impacting milk production at Weber County dairies, officials declare emergency
July 23, 2026

​OGDEN — Weber County officials have declared a state of emergency stemming from the presence of avian flu at four dairies in the county.​
... The pathogenic avian influenza strain has thus far impacted four of nine dairies in Weber County, according to the resolution declaring the emergency. Bren Edwards, president of Weber County Farm Bureau, said two or three more Weber County dairies could be impacted given "the high rate of transmission" of the ailment.
...The impacted Weber County dairies, Edwards said, are experiencing a reduction in milk production of 6,000 to 10,000 pounds of milk per day.

continued: https://www.ksl.com/article/5160151...er-county-dairies-officials-declare-emergency
 
Detections of Highly Pathogenic Avian Influenza in Wild Birds

Last Modified: August 07, 2026
...
State County Collection Date Date Detected HPAI Strain Bird Species WOAH Classification Sampling Method
UtahCache7/22/20268/3/2026EA H5Eurasian collared doveWild birdAgency harvest
UtahCache7/22/20268/3/2026EA H5Rock pigeonWild birdAgency harvest
UtahCache7/21/20268/3/2026EA H5KilldeerWild birdAgency harvest
UtahCache7/21/20268/3/2026EA H5N1Rock pigeonWild birdAgency harvest
​...

https://www.aphis.usda.gov/livestoc...-influenza/hpai-detections/wild-birds?page=1​
 
h/t Hogvet51

My bolding....

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USDA Discloses Utah Mink Farm H5N1 Infection

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[TD="width: 491, align: left"]Denmark Will Kill All Farmed Mink, Citing Covid Infections - The New York  Times - Denmark Will Kill All Farmed Mink, Citing Covid Infections - The New York  Times[/TD]
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Never skip checking the USDA line lists on a Friday! Sometimes a zinger sneaks in there - today was such an occasion, with NSVL list a mink farm infection in Utah under the Mammals Section of HPAI cases. These samples were collected back on August 7th, which means the mink likely started dying around August 1st. NAHLN lab testing likely suggested H5N1 (versus SARS-CoV-2 or another influenza strain the week of August 10th, with rapid shipment to NVSL for confirmatory testing later that week. NVSL then officially confirmed the samples positive for H5N1 August 17th, and published those results to the public today, August 21st. I only lay out the timeline to illustrate the inevitable 3-week delay between initiation of clinical disease and public confirmation of infection. While authorities knew by August 10th or so of the infection, it takes another 11 days to confirm and make it public.

H5N1 in mink is a serious threat, given the susceptibility of the species and the density of animals on a farm, leading to increased opportunities for mutations and/or reassortment with other concurrent (human) influenza infections.

Here are 3 references readers can review dating back to earlier research occurring after an outbreak on a Spanish mink farm in 2023:

Risk assessment of a highly pathogenic H5N1 influenza virus from mink | Nature Communications

‘Incredibly concerning’: Bird flu outbreak at Spanish mink farm triggers pandemic fears | Science | AAAS

Ask the Expert: Highly Pathogenic Avian Influenza A(H5N1) Viruses | Bird Flu | CDC

I’m confident that a bevy of news releases will follow next week on this case. NVSL and CDC have undoubtedly had tentative sequence information since the day the sample arrived at Ames to evaluate (earlier if Utah sequenced it); I would hope that department of agriculture and public health folks in Utah have also been involved on the farm to assure that zoonotic concerns have been addressed. I know that during the COVID outbreak in 2019, Utah agriculture department, public health, CDC and mink farmers reached some degree of trust in collaborating on SARS-CoV-2 monitoring in a very difficult situation. These are very delicate situations to negotiate and lack of early publicity is not necessarily a nefarious action by regulators.

The big questions in my mind revolve around:
  1. what is the likely source and are other mink farms in Utah or other states at risk?
  2. what is the genotype? B3.13 from a nearby dairy outbreak or D1.X from a wildlife incursion or something completely different?
  3. what concerning SNP’s may have developed or are developing as this virus moves through mink herd(s)? Is the virus moving closer to inter-mammalian aerosol transmission?
  4. what is the morbidity and mortality rate in mink?
  5. are nearby wildlife susceptible?
  6. are nearby domestic species (cats and dogs) affected?
  7. tracebacks to other contact mink herds (if any)
While the notice lists Salt Lake County as the location, that is likely just a placeholder listing the capital city, with actual county of the farm masked to preserve farm anonymity. Mink farms need protection from locational disclosure for lots of reasons.

I have another unrelated column nearly ready to release, but this is a “big deal” in the H5N1 world that will echo worldwide, so it bumped ahead. Stay tuned.

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That Touch of Mink Flu (H5N1 in Utah Edition)


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#19,305

Mink are members of the Mustelidae family of carnivorous mammals, which also includes otters, badgers, weasel, martens, ferrets, and wolverines. Many of these species are susceptible to flu viruses – most notably ferrets – which are often used in influenza research.

Over the past 20 years we've looked a a number of concerning spillovers, including:
  • 2009's That Touch Of Mink Flu, where at least 11 mink farms in the Holstebro municipality of Denmark were reported to be infected with a variant of the human H3N2 virus.
  • A year earlier CIDRAP reported on a European mink found infected with an aggressive form of the H5 flu virus in the Blekinge region of southern Sweden near where H5N1 had been detected in wild birds.
We've seen literally dozens of reports of spillovers into mink since, including the generation of mink-variant COVID strains which - at least temporarily - circulated in humans in Europe back in 2020 (see Preprint: Emergence & Spread of SARS-CoV-2 Variants from Farmed Mink to Humans and Back - Denmark, June-November 2020).

New alarms were raised in the fall of 2022 when H5N1 began spreading rapidly through a large mink farm in Spain (see Eurosurveillance: HPAI A(H5N1) Virus Infection in Farmed Minks, Spain, October 2022).

This mink-derived H5N1 virus from Spain carried a rare mutation (PB-T271A), which is believed to `enhance the polymerase activity of influenza A viruses in mammalian host cells and mice'. In 2023 the CDC issued an IRAT Risk Assessment On Mink Variant of Avian H5N1, finding it's scores had risen in 6 of the 10 parameters used to evaluate their zoonotic potential.​

In 2023 we saw scores of fur farms (both mink & fox) in Finland hit by HPAI, resulting in massive culls.

During that protracted outbreak, in PNAS: Mink Farming Poses Risks for Future Viral Pandemics, we looked at an opinion piece by Professor Wendy Barclay & Tom Peacock on why fur farms - and mink farms in particular - are high risk venues for both flu and SARS.​

Spillovers into farmed animals are particularly worrisome, because they allow for serial transmission across a large number of hosts, which may result in host adaptation.
serial+passage.JPG

Since then, new studies have continued to emerge highlighting the risks, including:
Yesterday the USDA updated their Detections of Highly Pathogenic Avian Influenza in Mammals dashboard to include 6 captive American Mink in Utah infected with EA H5N1 (see below).


1 To protect data confidentiality, the county and mapped locations of these detections represent the approximate location of the State capitol.

Details are extraordinarily scant (even the county location is `masked'), but the dates of collection and confirmation all are quite recent (8/7 & 8/17). This is presumably a fur farm, but no details are provided.

I've found no media reports on this event, and there appears to be nothing publicly available on theUtah Agriculture Department Website. As of this writing, I don't find anything on the WOAH WAHIS website, either.​


Whether these mink were sick, or died, or how many others might be infected on the premises or at risk, and what steps are being taken to contain this outbreak, or protect farm workers, isn't stated.

Utah has already been having a rough H5N1 summer, with 16 cattle herds reportedly infected since June, and nearly 1.5 million chickens culled due to the virus.​

There are disappointingly far too few details provided to make any reasonable assumptions about the size, or potential impact, of this outbreak. Hopefully we'll get more details sooner rather than later.


Note: After I posted this blog I noticed Hogvet51 has posted his own thoughts. If you aren't reading his substack, you should add it to your list.
https://afludiary.blogspot.com/2026/08/that-touch-of-mink-flu-h5n1-in-utah.html
 
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