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PLOS: Evidence of Infection by H5N2 Highly Pathogenic Avian Influenza Viruses in Healthy Wild Waterfowl

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  • PLOS: Evidence of Infection by H5N2 Highly Pathogenic Avian Influenza Viruses in Healthy Wild Waterfowl

    Evidence of Infection by H5N2 Highly Pathogenic Avian Influenza Viruses in Healthy Wild Waterfowl

    Nicolas Gaidet 1#*, Giovanni Cattoli 2#, Saliha Hammoumi 1, Scott H. Newman 3, Ward Hagemeijer 4, John Y. Takekawa 5, Julien Cappelle 1, Tim Dodman 4, Tony Joannis 6, Patricia Gil 1, Isabella Monne 2, Alice Fusaro 2, Ilaria Capua 2, Shiiwuua Manu 7, Pierfrancesco Micheloni 8, Ulf Ottosson 9, John H. Mshelbwala 10, Juan Lubroth 3, Joseph Domenech 3, François Monicat 1

    1 Centre de Coopération Internationale en Recherche Agronomique pour le Développement, Montpellier, France2 Istituto Zooprofilattico Sperimentale delle Venezie, Legnaro, Italy3 Food and Agriculture Organization of the United Nations, Animal Production and Health Division, Rome, Italy4 Wetlands International, Wageningen, The Netherlands5 U.S. Geological Survey, Western Ecological Research Center, Vallejo California, United States of America6 National Veterinary Research Institute, Vom, Nigeria7 AP Leventis Ornithological Research Institute, Jos, Nigeria8 Istituto Nazionale per la Fauna Selvatica, Bologna, Italy9 Ottenby Bird Observatory, Kehlen, Luxembourg10 Federal Department of Forestry, Abuja, Nigeria

    Abstract
    The potential existence of a wild bird reservoir for highly pathogenic avian influenza (HPAI) has been recently questioned by the spread and the persisting circulation of H5N1 HPAI viruses, responsible for concurrent outbreaks in migratory and domestic birds over Asia, Europe, and Africa.

    During a large-scale surveillance programme over Eastern Europe, the Middle East, and Africa, we detected avian influenza viruses of H5N2 subtype with a highly pathogenic (HP) viral genotype in healthy birds of two wild waterfowl species sampled in Nigeria.

    We monitored the survival and regional movements of one of the infected birds through satellite telemetry, providing a rare evidence of a non-lethal natural infection by an HP viral genotype in wild birds.

    Phylogenetic analysis of the H5N2 viruses revealed close genetic relationships with H5 viruses of low pathogenicity circulating in Eurasian wild and domestic ducks.

    In addition, genetic analysis did not reveal known gallinaceous poultry adaptive mutations, suggesting that the emergence of HP strains could have taken place in either wild or domestic ducks or in non-gallinaceous species.

    The presence of coexisting but genetically distinguishable avian influenza viruses with an HP viral genotype in two cohabiting species of wild waterfowl, with evidence of non-lethal infection at least in one species and without evidence of prior extensive circulation of the virus in domestic poultry, suggest that some strains with a potential high pathogenicity for poultry could be maintained in a community of wild waterfowl.

    Author Summary
    Until recently, the highly pathogenic avian influenza (HPAI) viruses responsible for high mortality in some domestic poultry were considered not to have a wild bird reservoir, but to emerge in domestic poultry populations from low pathogenic viruses perpetuated in wild waterbirds.

    The rapid spread of H5N1 HPAI virus in 2005–2006, with concurrent outbreaks reported in both domestic and wild birds over Asia, Europe, and Africa, has raised concerns about the potential role of migratory birds in the epidemiology of the HPAI infection.

    Wild birds were sampled in Africa and tested by molecular and virological methods in an attempt to trace the circulation of HPAI viruses.

    In addition, some of these wild birds were equipped with satellite transmitters to track their local and migratory movements in relation to the potential spread of avian diseases.

    Avian influenza viruses (H5N2) were detected in wild waterfowl in Nigeria, and were subsequently characterized as highly pathogenic by molecular sequencing (HPAI viral genotype).

    Movements of one infected bird tracked by satellite telemetry revealed that it survived infection by an HP viral genotype. This result constitutes a rare finding of infection by an AIV with an HPAI viral genotype in healthy wild birds.

    Citation: Gaidet N, Cattoli G, Hammoumi S, Newman SH, Hagemeijer W, et al. (2008) Evidence of Infection by H5N2 Highly Pathogenic Avian Influenza Viruses in Healthy Wild Waterfowl. PLoS Pathog 4(8): e1000127. doi:10.1371/journal.ppat.1000127

    Editor: Ron A. M. Fouchier, Erasmus Medical Center, Netherlands

    Received: March 10, 2008; Accepted: July 16, 2008; Published: August 15, 2008

    This is an open-access article distributed under the terms of the Creative Commons Public Domain declaration which stipulates that, once placed in the public domain, this work may be freely reproduced, distributed, transmitted, modified, built upon, or otherwise used by anyone for any lawful purpose.

    Funding: This extensive survey has been implemented in the framework of an FAO Technical Cooperation Programme, and has been made possible by additional financial resources received from the governments of France and Sweden. We also acknowledge the Global Avian Influenza Network for Surveillance (GAINS) program, funded in part by USAID Grant No. LAG-A-00-99-00047-00, for the larger joint wild bird surveillance activities in Nigeria. The opinions expressed herein are those of the authors and do not necessarily reflect the views of the U.S. Agency for International Development.

    Competing interests: The authors have declared that no competing interests exist.

    * E-mail: nicolas.gaidet@cirad.fr
    # These authors contributed equally to this work.
    -
    http://www.plospathogens.org/article/info%3Adoi%2F10.1371%2Fjournal.ppat.1000127
    -------

  • #2
    Re: _|PLOS: Evidence of Infection by H5N2 Highly Pathogenic Avian Influenza Viruses in Healthy Wild Waterfowl|_

    Full article posted here at FT at: http://www.flutrackers.com/forum/showpost.php?p=174523
    http://novel-infectious-diseases.blogspot.com/

    Comment


    • #3
      Re: _|PLOS: Evidence of Infection by H5N2 Highly Pathogenic Avian Influenza Viruses in Healthy Wild Waterfowl|_

      GenBank accession numbers EU544242 to EU544248

      Comment


      • #4
        Re: _|PLOS: Evidence of Infection by H5N2 Highly Pathogenic Avian Influenza Viruses in Healthy Wild Waterfowl|_

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        gi|189006043|gb|EU544248.1|[189006043]
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        gi|189006041|gb|EU544247.1|[189006041]
        </TD></TR></TBODY></TABLE></DT></DL>
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        gi|189006039|gb|EU544246.1|[189006039]
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        gi|189006037|gb|EU544245.1|[189006037]
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        <SCRIPT language=JavaScript1.2><!-- var Menu189006035 = [ ["UseLocalConfig", "jsmenu3Config", "", ""], ["Protein" , "window.top.location='/sites/entrez?Db=protein&DbFrom=nuccore&Cmd=Link&LinkName =nuccore_protein&LinkReadableName=Protein&IdsFromR esult=189006035&ordinalpos=5&itool=EntrezSystem2.P Entrez.Nuccore.Sequence_ResultsPanel.Sequence_RVDo cSum' ", "", ""], ["PubMed" , "window.top.location='/sites/entrez?Db=pubmed&DbFrom=nuccore&Cmd=Link&LinkName= nuccore_pubmed&LinkReadableName=PubMed&IdsFromResu lt=189006035&ordinalpos=5&itool=EntrezSystem2.PEnt rez.Nuccore.Sequence_ResultsPanel.Sequence_RVDocSu m' ", "", ""], ["Taxonomy" , "window.top.location='/sites/entrez?Db=taxonomy&DbFrom=nuccore&Cmd=Link&LinkNam e=nuccore_taxonomy&LinkReadableName=Taxonomy&IdsFr omResult=189006035&ordinalpos=5&itool=EntrezSystem 2.PEntrez.Nuccore.Sequence_ResultsPanel.Sequence_R VDocSum' ", "", ""] ] --></SCRIPT>Links</TD></TR><TR><TD style="PADDING-LEFT: 2.8em" vAlign=top align=left colSpan=3>Influenza A virus (A/spur-winged goose/Nigeria/5388-8/2007(H5N2)) segment 4 hemagglutinin (HA) gene, partial cds
        gi|189006035|gb|EU544244.1|[189006035]
        </TD></TR></TBODY></TABLE></DT></DL>
        <!--docsumok 189006033 189006033 1 0 1378--><DL><DT><TABLE cellPadding=0 width="100%"><TBODY><TR><TD style="WHITE-SPACE: nowrap" vAlign=top width="20%"><INPUT id=UidCheckBox type=checkbox value=189006033 name=EntrezSystem2.PEntrez.Nuccore.Sequence_Result sPanel.Sequence_RVDocSum.uid sid="6">6: EU544243</TD><TD vAlign=top align=left>
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        <SCRIPT language=JavaScript1.2><!-- var Menu189006033 = [ ["UseLocalConfig", "jsmenu3Config", "", ""], ["Protein" , "window.top.location='/sites/entrez?Db=protein&DbFrom=nuccore&Cmd=Link&LinkName =nuccore_protein&LinkReadableName=Protein&IdsFromR esult=189006033&ordinalpos=6&itool=EntrezSystem2.P Entrez.Nuccore.Sequence_ResultsPanel.Sequence_RVDo cSum' ", "", ""], ["PubMed" , "window.top.location='/sites/entrez?Db=pubmed&DbFrom=nuccore&Cmd=Link&LinkName= nuccore_pubmed&LinkReadableName=PubMed&IdsFromResu lt=189006033&ordinalpos=6&itool=EntrezSystem2.PEnt rez.Nuccore.Sequence_ResultsPanel.Sequence_RVDocSu m' ", "", ""], ["Taxonomy" , "window.top.location='/sites/entrez?Db=taxonomy&DbFrom=nuccore&Cmd=Link&LinkNam e=nuccore_taxonomy&LinkReadableName=Taxonomy&IdsFr omResult=189006033&ordinalpos=6&itool=EntrezSystem 2.PEntrez.Nuccore.Sequence_ResultsPanel.Sequence_R VDocSum' ", "", ""] ] --></SCRIPT>Links</TD></TR><TR><TD style="PADDING-LEFT: 2.8em" vAlign=top align=left colSpan=3>Influenza A virus (A/spur-winged goose/Nigeria/5388-2/2007(H5N2)) segment 6 neuraminidase (NA) gene, partial cds
        gi|189006033|gb|EU544243.1|[189006033]
        </TD></TR></TBODY></TABLE></DT></DL>
        <!--docsumok 189006031 189006031 1 0 1707--><DL><DT><TABLE cellPadding=0 width="100%"><TBODY><TR><TD style="WHITE-SPACE: nowrap" vAlign=top width="20%"><INPUT id=UidCheckBox type=checkbox value=189006031 name=EntrezSystem2.PEntrez.Nuccore.Sequence_Result sPanel.Sequence_RVDocSum.uid sid="7">7: EU544242</TD><TD vAlign=top align=left>
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        <SCRIPT language=JavaScript1.2><!-- var Menu189006031 = [ ["UseLocalConfig", "jsmenu3Config", "", ""], ["Protein" , "window.top.location='/sites/entrez?Db=protein&DbFrom=nuccore&Cmd=Link&LinkName =nuccore_protein&LinkReadableName=Protein&IdsFromR esult=189006031&ordinalpos=7&itool=EntrezSystem2.P Entrez.Nuccore.Sequence_ResultsPanel.Sequence_RVDo cSum' ", "", ""], ["PubMed" , "window.top.location='/sites/entrez?Db=pubmed&DbFrom=nuccore&Cmd=Link&LinkName= nuccore_pubmed&LinkReadableName=PubMed&IdsFromResu lt=189006031&ordinalpos=7&itool=EntrezSystem2.PEnt rez.Nuccore.Sequence_ResultsPanel.Sequence_RVDocSu m' ", "", ""], ["Taxonomy" , "window.top.location='/sites/entrez?Db=taxonomy&DbFrom=nuccore&Cmd=Link&LinkNam e=nuccore_taxonomy&LinkReadableName=Taxonomy&IdsFr omResult=189006031&ordinalpos=7&itool=EntrezSystem 2.PEntrez.Nuccore.Sequence_ResultsPanel.Sequence_R VDocSum' ", "", ""] ] --></SCRIPT>Links</TD></TR><TR><TD style="PADDING-LEFT: 2.8em" vAlign=top align=left colSpan=3>Influenza A virus (A/spur-winged goose/Nigeria/5388-5/2007(H5N2)) segment 4 hemagglutinin (HA) gene, complete cds
        gi|189006031|gb|EU544242.1|[189006031] </TD></TR></TBODY></TABLE></DT></DL>

        Comment


        • #5
          Re: _|PLOS: Evidence of Infection by H5N2 Highly Pathogenic Avian Influenza Viruses in Healthy Wild Waterfowl|_

          HA cleavage site matches H5N1 in wild birds in Thailand.

          Comment


          • #6
            Re: _|PLOS: Evidence of Infection by H5N2 Highly Pathogenic Avian Influenza Viruses in Healthy Wild Waterfowl|_

            gb|EU544248.1| Influenza A virus (A/spur-winged goose/Nigeria... 32.2 0.041
            gb|EU544247.1| Influenza A virus (A/white-faced whistling duc... 32.2 0.041
            gb|EU544244.1| Influenza A virus (A/spur-winged goose/Nigeria... 32.2 0.041
            gb|EU544242.1| Influenza A virus (A/spur-winged goose/Nigeria... 32.2 0.041
            gb|EF541417.1| Influenza A virus (A/Thailand/Chaiyaphum/622/2... 32.2 0.041
            gb|EF467802.1| Influenza A virus (A/chicken/Thailand/2/04(H5N... 32.2 0.041

            Comment


            • #7
              Re: _|PLOS: Evidence of Infection by H5N2 Highly Pathogenic Avian Influenza Viruses in Healthy Wild Waterfowl|_

              Code:
               
              gb|EU544248.1|  Influenza A virus (A/spur-winged goose/Nigeria...  30.2    0.16 
              gb|EU544247.1|  Influenza A virus (A/white-faced whistling duc...  30.2    0.16 
              gb|EU544244.1|  Influenza A virus (A/spur-winged goose/Nigeria...  30.2    0.16 
              gb|EU544242.1|  Influenza A virus (A/spur-winged goose/Nigeria...  30.2    0.16 
              gb|EU032580.1|  Influenza A virus (A/human/Pandharpur/20055169...  30.2    0.16 
              gb|EU812564.1|  Influenza A virus (A/swine/Tabanan-Indonesia/0...  30.2    0.16 
              gb|DQ644955.2|  Influenza A virus (A/chicken/Denpasar/01/2004(...  30.2    0.16 
              gb|EU249368.1|  Influenza A virus (A/shorebird/Korea/S6/2006(H...  30.2    0.16 
              gb|CY031036.1|  Influenza A virus (A/environment/Maryland/1189...  30.2    0.16 
              gb|CY028941.1|  Influenza A virus (A/goose/Shantou/157/2002(H5...  30.2    0.16 
              gb|EF491876.1|  Influenza A virus (A/mallard/ON/499/2005(H5N1)...  30.2    0.16 
              gb|EU015416.1|  Influenza A virus (A/Indonesia/TLL014/2006(H5N...  30.2    0.16 
              gb|EU015415.1|  Influenza A virus (A/Indonesia/TLL013/2006(H5N...  30.2    0.16 
              gb|EU015414.1|  Influenza A virus (A/Indonesia/TLL012/2006(H5N...  30.2    0.16 
              gb|EU015413.1|  Influenza A virus (A/Indonesia/TLL011/2006(H5N...  30.2    0.16 
              gb|EU015412.1|  Influenza A virus (A/Indonesia/TLL010/2006(H5N...  30.2    0.16 
              gb|EU015411.1|  Influenza A virus (A/Indonesia/TLL009/2006(H5N...  30.2    0.16 
              gb|EU015410.1|  Influenza A virus (A/Indonesia/TLL008/2006(H5N...  30.2    0.16 
              gb|EU015409.1|  Influenza A virus (A/Indonesia/TLL007/2006(H5N...  30.2    0.16 
              gb|EU015408.1|  Influenza A virus (A/Indonesia/TLL006/2006(H5N...  30.2    0.16 
              gb|EU015407.1|  Influenza A virus (A/Indonesia/TLL005/2006(H5N...  30.2    0.16 
              gb|EU015406.1|  Influenza A virus (A/Indonesia/TLL004/2006(H5N...  30.2    0.16 
              gb|EU015405.1|  Influenza A virus (A/Indonesia/TLL003/2006(H5N...  30.2    0.16 
              gb|EU015404.1|  Influenza A virus (A/Indonesia/TLL002/2006(H5N...  30.2    0.16 
              gb|EU015403.1|  Influenza A virus (A/Indonesia/TLL001/2006(H5N...  30.2    0.16 
              gb|CY028235.1|  Influenza A virus (A/mallard/Maryland/182/2006...  30.2    0.16 
              gb|EU167546.1|  Influenza A virus (A/chicken/Cicurug/IPB24-RS/...  30.2    0.16 
              gb|EU146624.1|  Influenza A virus (A/Indonesia/6/2005(H5N1)) s...  30.2    0.16 
              gb|EU146632.1|  Influenza A virus (A/Indonesia/7/2005(H5N1)) s...  30.2    0.16 
              gb|EU146640.1|  Influenza A virus (A/Indonesia/175H/2005(H5N1)...  30.2    0.16 
              gb|EU146648.1|  Influenza A virus (A/Indonesia/160H/2005(H5N1)...  30.2    0.16 
              gb|EU146656.1|  Influenza A virus (A/Indonesia/195H/2005(H5N1)...  30.2    0.16 
              gb|EU146664.1|  Influenza A virus (A/Indonesia/239H/2005(H5N1)...  30.2    0.16 
              gb|EU146672.1|  Influenza A virus (A/Indonesia/245H/2005(H5N1)...  30.2    0.16 
              gb|EU146681.1|  Influenza A virus (A/Indonesia/283H/2006(H5N1)...  30.2    0.16 
              gb|EU146688.1|  Influenza A virus (A/Indonesia/286H/2006(H5N1)...  30.2    0.16 
              gb|EU146697.1|  Influenza A virus (A/Indonesia/298H/2006(H5N1)...  30.2    0.16 
              gb|EU146705.1|  Influenza A virus (A/Indonesia/304H/2006(H5N1)...  30.2    0.16 
              gb|EU146713.1|  Influenza A virus (A/Indonesia/292H/2006(H5N1)...  30.2    0.16 
              gb|EU146721.1|  Influenza A virus (A/Indonesia/321H/2006(H5N1)...  30.2    0.16 
              gb|EU146729.1|  Influenza A virus (A/Indonesia/341H/2006(H5N1)...  30.2    0.16 
              gb|EU146737.1|  Influenza A virus (A/Indonesia/534H/2006(H5N1)...  30.2    0.16 
              gb|EU146801.1|  Influenza A virus (A/Indonesia/567H/2006(H5N1)...  30.2    0.16 
              gb|EU146745.1|  Influenza A virus (A/Indonesia/538H/2006(H5N1)...  30.2    0.16 
              gb|EU146753.1|  Influenza A virus (A/Indonesia/535H/2006(H5N1)...  30.2    0.16 
              gb|EU146754.1|  Influenza A virus (A/Indonesia/536H/2006(H5N1)...  30.2    0.16 
              gb|EU146755.1|  Influenza A virus (A/Indonesia/546H/2006(H5N1)...  30.2    0.16 
              gb|EU146777.1|  Influenza A virus (A/Indonesia/542H/2006(H5N1)...  30.2    0.16 
              gb|EU146785.1|  Influenza A virus (A/Indonesia/560H/2006(H5N1)...  30.2    0.16 
              gb|EU146793.1|  Influenza A virus (A/Indonesia/546bH/2006(H5N1...  30.2    0.16 
              gb|EU146825.1|  Influenza A virus (A/Indonesia/604H/2006(H5N1)...  30.2    0.16 
              gb|EU146809.1|  Influenza A virus (A/Indonesia/569H/2006(H5N1)...  30.2    0.16 
              gb|EU146817.1|  Influenza A virus (A/Indonesia/583H/2006(H5N1)...  30.2    0.16 
              gb|EU146622.1|  Influenza A virus (A/Indonesia/5/2005(H5N1)) s...  30.2    0.16 
              gb|EF607882.1|  Influenza A virus (A/northern pintail/FL/598/2...  30.2    0.16 
              gb|EF607855.1|  Influenza A virus (A/mute swan/MI/451072-2/200...  30.2    0.16 
              gb|EF607854.1|  Influenza A virus (A/duck/PA/454069/2005(H5N1)...  30.2    0.16 
              gb|EF607853.1|  Influenza A virus (A/black duck/NC/674-694/200...  30.2    0.16 
              gb|EU124277.1|  Influenza A virus (A/chicken/West Java/TASIKSO...  30.2    0.16 
              gb|EU124276.1|  Influenza A virus (A/chicken/West Java/SMI-CSL...  30.2    0.16 
              gb|EU124215.1|  Influenza A virus (A/Chicken/Indonesia/Soppeng...  30.2    0.16 
              gb|EU124213.1|  Influenza A virus (A/Swan/Indonesia/Malang1631...  30.2    0.16 
              gb|EU124212.1|  Influenza A virus (A/Chicken/Indonesia/Magelan...  30.2    0.16 
              gb|EU124211.1|  Influenza A virus (A/Chicken/Indonesia/Garut16...  30.2    0.16 
              gb|EU124210.1|  Influenza A virus (A/Chicken/Indonesia/Bandung...  30.2    0.16 
              gb|EU124209.1|  Influenza A virus (A/Chicken/Indonesia/Kulon16...  30.2    0.16 
              gb|EU124208.1|  Influenza A virus (A/Chicken/Indonesia/Gunung ...  30.2    0.16 
              gb|EU124206.1|  Influenza A virus (A/Muscovy Duck/Indonesia/Ke...  30.2    0.16 
              gb|EU124205.1|  Influenza A virus (A/Chicken/Indonesia/Lampung...  30.2    0.16 
              gb|EU124204.1|  Influenza A virus (A/Chicken/Indonesia/Rejang ...  30.2    0.16 
              gb|EU124203.1|  Influenza A virus (A/Chicken/Indonesia/Bangka ...  30.2    0.16 
              gb|EU124202.1|  Influenza A virus (A/Chicken/Indonesia/Bangka ...  30.2    0.16 
              gb|EU124201.1|  Influenza A virus (A/Chicken/Indonesia/Belitun...  30.2    0.16 
              gb|EU124200.1|  Influenza A virus (A/Chicken/Indonesia/Pekenba...  30.2    0.16 
              gb|EU124199.1|  Influenza A virus (A/Pigeon/Indonesia/Rokhit16...  30.2    0.16 
              gb|EU124198.1|  Influenza A virus (A/Chicken/Indonesia/Agam163...  30.2    0.16 
              gb|EU124197.1|  Influenza A virus (A/Chicken/Indonesia/Siak163...  30.2    0.16 
              gb|EU124196.1|  Influenza A virus (A/Chicken/Indonesia/Padang1...  30.2    0.16 
              gb|EU124163.1|  Influenza A virus (A/Chicken/West Java/HAMD/20...  30.2    0.16 
              gb|EU124162.1|  Influenza A virus (A/Chicken/West Java/SMI-END...  30.2    0.16 
              gb|EU124161.1|  Influenza A virus (A/Chicken/West Java/SMI-END...  30.2    0.16 
              gb|EU124160.1|  Influenza A virus (A/Chicken/West Java/SMI-PAT...  30.2    0.16 
              gb|EU124159.1|  Influenza A virus (A/Quail/Central Java/SMRG/2...  30.2    0.16 
              gb|EU124158.1|  Influenza A virus (A/Chicken/Papua/TA5/2006(H5...  30.2    0.16 
              gb|EU124157.1|  Influenza A virus (A/Chicken/Papua/TB1/2006(H5...  30.2    0.16 
              gb|EU124156.1|  Influenza A virus (A/Chicken/Papua/TB15/2006(H...  30.2    0.16 
              gb|EU124155.1|  Influenza A virus (A/Chicken/West Java/TASIK1/...  30.2    0.16 
              gb|EU124154.1|  Influenza A virus (A/Chicken/West Java/TASIK2/...  30.2    0.16 
              gb|EU124153.1|  Influenza A virus (A/Chicken/West Java/GARUT-M...  30.2    0.16 
              gb|EU124152.1|  Influenza A virus (A/Quail/Jakarta/JU1/2006(H5...  30.2    0.16 
              gb|EU124151.1|  Influenza A virus (A/Chicken/West Java/TASIKSO...  30.2    0.16 
              gb|EU124150.1|  Influenza A virus (A/Chicken/West Java/SMI-CSL...  30.2    0.16 
              gb|EU124149.1|  Influenza A virus (A/Muscovy Duck/Jakarta/HABW...  30.2    0.16 
              gb|EU124148.1|  Influenza A virus (A/Chicken/West Java/PWT-WIJ...  30.2    0.16 
              gb|EU124147.1|  Influenza A virus (A/Chicken/Madiun/BBVW1420/2...  30.2    0.16 
              gb|EU124146.1|  Influenza A virus (A/Chicken/Gunung Kidul/BBVW...  30.2    0.16 
              gb|EU124108.1|  Influenza A virus (A/Chicken/Deli Serdang/BPPV...  30.2    0.16 
              gb|EU124107.1|  Influenza A virus (A/Duck/Bufeleng/BPPV1/2005(...  30.2    0.16 
              gb|EU124106.1|  Influenza A virus (A/Duck/Tabanan/BPPV1/2005(H...  30.2    0.16 
              gb|EU124105.1|  Influenza A virus (A/Duck/Madiun/BBVW1358/2005...  30.2    0.16 
              gb|EU124104.1|  Influenza A virus (A/Duck/Pali/BBVW1358/2005(H...  30.2    0.16 
              gb|EU124103.1|  Influenza A virus (A/Chicken/Sembawa/BPPV-III/...  30.2    0.16 
              gb|EU124102.1|  Influenza A virus (A/Chicken/Palembang/BPPV-II...  30.2    0.16 
              gb|EU124101.1|  Influenza A virus (A/Chicken/Pakun Baru/BPPV-I...  30.2    0.16 
              gb|EU124100.1|  Influenza A virus (A/Chicken/Siak/BPPV-II/2005...  30.2    0.16 
              gb|EU124099.1|  Influenza A virus (A/Chicken/Rokan Hilli/BPPV-...  30.2    0.16 
              gb|EU124098.1|  Influenza A virus (A/Chicken/Duma/BBPV-II/2005...  30.2    0.16 
              gb|EU124097.1|  Influenza A virus (A/Chicken/Murao Jambi/BBPV-...  30.2    0.16 
              gb|EU124096.1|  Influenza A virus (A/Chicken/Salam/BBPV-II/200...  30.2    0.16 
              gb|EU124095.1|  Influenza A virus (A/Chicken/Agam/BBPVI/2005(H...  30.2    0.16 
              gb|EU124094.1|  Influenza A virus (A/Chicken/Medan/BPPV1-498/2...  30.2    0.16 
              gb|EU124093.1|  Influenza A virus (A/Chicken/Pidie/BPPV1/2005(...  30.2    0.16 
              gb|EU124092.1|  Influenza A virus (A/chicken/Medan/BPPV1-534/2...  30.2    0.16 
              gb|EU124091.1|  Influenza A virus (A/Chicken/Deli Derdang/BBPV...  30.2    0.16 
              gb|EU124090.1|  Influenza A virus (A/Turkey/Langkat/BBPVI/2005...  30.2    0.16 
              gb|EU124089.1|  Influenza A virus (A/Chicken/Karo/BBPVII/2006(...  30.2    0.16 
              gb|EU124088.1|  Influenza A virus (A/Chicken/Padang/BBPVII/200...  30.2    0.16 
              gb|EU124087.1|  Influenza A virus (A/Chicken/Pulau Rampang/BBP...  30.2    0.16 
              gb|EU124086.1|  Influenza A virus (A/Chicken/Way Kanan/BBPVIII...  30.2    0.16 
              gb|EU124085.1|  Influenza A virus (A/Chicken/Bandar Lampung/BB...  30.2    0.16 
              gb|EU124084.1|  Influenza A virus (A/Duck/Indramayu/BBPW109/20...  30.2    0.16 
              gb|EU124083.1|  Influenza A virus (A/Chicken/Taput/BBPV1-576/2...  30.2    0.16 
              gb|EU124082.1|  Influenza A virus (A/Chicken/Langkat/BBPV1-576...  30.2    0.16 
              gb|EU124081.1|  Influenza A virus (A/Chicken/Medan/BBPV1-576/2...  30.2    0.16 
              gb|EU124080.1|  Influenza A virus (A/Chicken/Medan/BBPV1-571/2...  30.2    0.16 
              gb|EU124054.1|  Influenza A virus (A/Chicken/Indonesia/Wates83...  30.2    0.16 
              gb|EU124053.1|  Influenza A virus (A/Chicken/Indonesia/Wates12...  30.2    0.16 
              gb|EU124052.1|  Influenza A virus (A/Chicken/Indonesia/Wates80...  30.2    0.16 
              gb|EU124050.1|  Influenza A virus (A/Chicken/Indonesia/Wates13...  30.2    0.16 
              gb|EU124049.1|  Influenza A virus (A/Chicken/Indonesia/Wates1/...  30.2    0.16 
              gb|EF405825.1|  Influenza A virus (A/mallard/ON/499/2005(H5N1)...  30.2    0.16 
              gb|EF205596.1|  Influenza A virus (A/mallard/MB/458/2005(H5)) ...  30.2    0.16 
              gb|EF634309.1|  Influenza A virus (A/muscovy duck/Jakarta/Sum1...  30.2    0.16 
              gb|EF634308.1|  Influenza A Virus (A/chicken/West Java/GrtMay2...  30.2    0.16 
              gb|EF679200.1|  Influenza A virus (A/chicken/Hong Kong/14/1976...  30.2    0.16 
              gb|EF679199.1|  Influenza A virus (A/duck/Hong Kong/717/1979 (...  30.2    0.16 
              gb|EF556203.1|  Influenza A virus (A/swine/Hainan/1/2005(H1N2)...  30.2    0.16 
              gb|EF541394.1|  Influenza A virus (A/Indonesia/5/05(H5N1)) seg...  30.2    0.16 
              dbj|AB241623.2|  Influenza A virus (A/duck/Hokkaido/84/02(H5N3...  30.2    0.16 
              gb|EF473081.1|  Influenza A virus (A/chicken/Indonesia/11/2003...  30.2    0.16 
              gb|EF473080.1|  Influenza A virus (A/chicken/Indonesia/7/2003(...  30.2    0.16 
              gb|CY019432.1|  Influenza A virus (A/Indonesia/CDC1047S/2007(H...  30.2    0.16 
              gb|CY019424.1|  Influenza A virus (A/Indonesia/CDC1047/2007(H5...  30.2    0.16 
              gb|CY019416.1|  Influenza A virus (A/Indonesia/CDC1046T/2007(H...  30.2    0.16 
              gb|CY019408.1|  Influenza A virus (A/Indonesia/CDC1046/2007(H5...  30.2    0.16 
              gb|CY019400.1|  Influenza A virus (A/Indonesia/CDC1032T/2007(H...  30.2    0.16 
              gb|CY019392.1|  Influenza A virus (A/Indonesia/CDC1032N/2007(H...  30.2    0.16 
              gb|CY019384.1|  Influenza A virus (A/Indonesia/CDC1032/2007(H5...  30.2    0.16 
              gb|CY019376.1|  Influenza A virus (A/Indonesia/CDC1031RE2/2007...  30.2    0.16 
              gb|CY019368.1|  Influenza A virus (A/Indonesia/CDC1031T2/2007(...  30.2    0.16 
              gb|CY019360.1|  Influenza A virus (A/Indonesia/CDC1031T/2007(H...  30.2    0.16 
              gb|CY019352.1|  Influenza A virus (A/Indonesia/CDC1031/2007(H5...  30.2    0.16 
              gb|CY017688.1|  Influenza A virus (A/Indonesia/CDC887/2006(H5N...  30.2    0.16 
              gb|CY014543.2|  Influenza A virus (A/Indonesia/CDC759/2006(H5N...  30.2    0.16 
              gb|CY014529.2|  Influenza A virus (A/Indonesia/CDC739/2006(H5N...  30.2    0.16 
              gb|CY017678.1|  Influenza A virus (A/Indonesia/CDC836T/2006(H5...  30.2    0.16 
              gb|CY017670.1|  Influenza A virus (A/Indonesia/CDC836/2006(H5N...  30.2    0.16 
              gb|CY017662.1|  Influenza A virus (A/Indonesia/CDC835/2006(H5N...  30.2    0.16 
              gb|CY017654.1|  Influenza A virus (A/Indonesia/CDC940/2006(H5N...  30.2    0.16 
              gb|CY017646.1|  Influenza A virus (A/Indonesia/CDC938E/2006(H5...  30.2    0.16 
              gb|CY017638.1|  Influenza A virus (A/Indonesia/CDC938/2006(H5N...  30.2    0.16 
              gb|CY015167.1|  Influenza A virus (A/murre/Alaska/175/1976(H1N...  30.2    0.16 
              gb|CY015163.1|  Influenza A virus (A/murre/Alaska/305/1976(H1N...  30.2    0.16 
              gb|CY014627.1|  Influenza A virus (A/duck/Australia/749/1980(H...  30.2    0.16 
              gb|CY014580.1|  Influenza A virus (A/mallard duck/Alberta/645/...  30.2    0.16 
              dbj|AB274304.1|  Influenza A virus (A/pintail/Shimane/324/98(H...  30.2    0.16 
              gb|CY014537.1|  Influenza A virus (A/Indonesia/CDC742/2006(H5N...  30.2    0.16 
              dbj|AB271115.1|  Influenza A virus (A/duck/Hokkaido/55/96(H1N1...  30.2    0.16 
              gb|CY014518.1|  Influenza A virus (A/Indonesia/CDC644/2006(H5N...  30.2    0.16 
              gb|CY014510.1|  Influenza A virus (A/Indonesia/CDC644T/2006(H5...  30.2    0.16 
              gb|CY014497.1|  Influenza A virus (A/Indonesia/CDC699/2006(H5N...  30.2    0.16 
              gb|CY014489.1|  Influenza A virus (A/Indonesia/CDC669P/2006(H5...  30.2    0.16 
              gb|CY014481.1|  Influenza A virus (A/Indonesia/CDC669/2006(H5N...  30.2    0.16 
              gb|CY014477.1|  Influenza A virus (A/Indonesia/CDC599N/2006(H5...  30.2    0.16 
              gb|CY014465.1|  Influenza A virus (A/Indonesia/CDC625L/2006(H5...  30.2    0.16 
              gb|CY014457.1|  Influenza A virus (A/Indonesia/CDC634T/2006(H5...  30.2    0.16 
              gb|CY014449.1|  Influenza A virus (A/Indonesia/CDC634P/2006(H5...  30.2    0.16 
              gb|CY014441.1|  Influenza A virus (A/Indonesia/CDC634/2006(H5N...  30.2    0.16 
              gb|CY014433.1|  Influenza A virus (A/Indonesia/CDC625/2006(H5N...  30.2    0.16 
              gb|CY014425.1|  Influenza A virus (A/Indonesia/CDC624E/2006(H5...  30.2    0.16 
              gb|CY014417.1|  Influenza A virus (A/Indonesia/CDC624/2006(H5N...  30.2    0.16 
              gb|CY014409.1|  Influenza A virus (A/Indonesia/CDC623E/2006(H5...  30.2    0.16 
              gb|CY014401.1|  Influenza A virus (A/Indonesia/CDC623/2006(H5N...  30.2    0.16 
              gb|CY014393.1|  Influenza A virus (A/Indonesia/CDC610/2006(H5N...  30.2    0.16 
              gb|CY014384.1|  Influenza A virus (A/Indonesia/CDC582/2006(H5N...  30.2    0.16 
              gb|CY014376.1|  Influenza A virus (A/Indonesia/CDC523T/2006(H5...  30.2    0.16 
              gb|CY014368.1|  Influenza A virus (A/Indonesia/CDC523E/2006(H5...  30.2    0.16 
              gb|CY014311.1|  Influenza A virus (A/Indonesia/CDC523/2006(H5N...  30.2    0.16 
              gb|CY014303.1|  Influenza A virus (A/Indonesia/CDC599/2006(H5N...  30.2    0.16 
              gb|CY014296.1|  Influenza A virus (A/Indonesia/CDC597/2006(H5N...  30.2    0.16 
              gb|CY014288.1|  Influenza A virus (A/Indonesia/CDC596/2006(H5N...  30.2    0.16 
              gb|CY014280.1|  Influenza A virus (A/Indonesia/CDC595/2006(H5N...  30.2    0.16 
              gb|CY014272.1|  Influenza A virus (A/Indonesia/CDC594/2006(H5N...  30.2    0.16 
              gb|CY014213.1|  Influenza A virus (A/Indonesia/CDC390/2006(H5N...  30.2    0.16 
              gb|CY014212.1|  Influenza A virus (A/Indonesia/CDC370T/2006(H5...  30.2    0.16 
              gb|CY014211.1|  Influenza A virus (A/Indonesia/CDC370P/2006(H5...  30.2    0.16 
              gb|CY014210.1|  Influenza A virus (A/Indonesia/CDC370E/2006(H5...  30.2    0.16 
              gb|CY014209.1|  Influenza A virus (A/Indonesia/CDC370/2006(H5N...  30.2    0.16 
              gb|CY014208.1|  Influenza A virus (A/feline/Indonesia/CDC1/200...  30.2    0.16 
              gb|CY014207.1|  Influenza A virus (A/Indonesia/CDC357/2006(H5N...  30.2    0.16 
              gb|CY014206.1|  Influenza A virus (A/Indonesia/CDC329/2006(H5N...  30.2    0.16 
              gb|CY014205.1|  Influenza A virus (A/Indonesia/CDC326T/2006(H5...  30.2    0.16 
              gb|CY014204.1|  Influenza A virus (A/Indonesia/CDC326/2006(H5N...  30.2    0.16 
              gb|CY014203.1|  Influenza A virus (A/Indonesia/CDC326N2/2006(H...  30.2    0.16 
              gb|CY014202.1|  Influenza A virus (A/Indonesia/CDC326N/2006(H5...  30.2    0.16 
              gb|CY014201.1|  Influenza A virus (A/Indonesia/CDC292T/2005(H5...  30.2    0.16 
              gb|CY014200.1|  Influenza A virus (A/Indonesia/CDC292N/2005(H5...  30.2    0.16 
              gb|CY014199.1|  Influenza A virus (A/Indonesia/CDC287T/2005(H5...  30.2    0.16 
              gb|CY014198.1|  Influenza A virus (A/Indonesia/CDC287E/2005(H5...  30.2    0.16 
              gb|CY014168.1|  Influenza A virus (A/Indonesia/CDC194P/2005(H5...  30.2    0.16 
              gb|CY014197.1|  Influenza A virus (A/Indonesia/CDC184/2005(H5N...  30.2    0.16 
              gb|CY014193.1|  Influenza A virus (A/chicken/Indonesia/CDC24/2...  30.2    0.16 
              gb|CY014185.1|  Influenza A virus (A/chicken/Indonesia/CDC25/2...  30.2    0.16 
              gb|CY014177.1|  Influenza A virus (A/Indonesia/CDC7/2005(H5N1)...  30.2    0.16 
              dbj|AB266091.1|  Influenza A virus (A/R(pintail/Shimane/324/98...  30.2    0.16 
              emb|AM183670.1|  Influenza A virus (A/chicken/Indonesia/R60/05...  30.2    0.16 
              emb|AM183669.1|  Influenza A virus (A/chicken/Indonesia/R134/0...  30.2    0.16 
              gb|DQ497669.1|  Influenza A virus (A/chicken/Tarutung/BPPVI/20...  30.2    0.16 
              gb|DQ497668.1|  Influenza A virus (A/chicken/Deli Serdang/BPPV...  30.2    0.16 
              gb|DQ497667.1|  Influenza A virus (A/chicken/Dairi/BPPVI/2005(...  30.2    0.16 
              gb|DQ497666.1|  Influenza A virus (A/chicken/Tebing Tinggi/BPP...  30.2    0.16 
              gb|DQ497665.1|  Influenza A virus (A/chicken/Simalanggang/BPPV...  30.2    0.16 
              gb|DQ497664.1|  Influenza A virus (A/turkey/Kedaton/BPPV3/2004...  30.2    0.16 
              gb|DQ497663.1|  Influenza A virus (A/chicken/Pangkalpinang/BPP...  30.2    0.16 
              gb|DQ497662.1|  Influenza A virus (A/chicken/Kupang-1-NTT/BPPV...  30.2    0.16 
              gb|DQ497661.1|  Influenza A virus (A/chicken/Kupang-3-NTT/BPPV...  30.2    0.16 
              gb|DQ497660.1|  Influenza A virus (A/chicken/Kupang-2-NTT/BPPV...  30.2    0.16 
              gb|DQ497659.1|  Influenza A virus (A/duck/Parepare/BBVM/2005(H...  30.2    0.16 
              gb|DQ497658.1|  Influenza A virus (A/chicken/Mangarai-NTT/BPPV...  30.2    0.16 
              gb|DQ497657.1|  Influenza A virus (A/chicken/Jembrana/BPPV6/20...  30.2    0.16 
              gb|DQ497656.1|  Influenza A virus (A/chicken/Bangli Bali/BPPV6...  30.2    0.16 
              gb|DQ497655.1|  Influenza A virus (A/chicken/Bangli Bali/BBPV6...  30.2    0.16 
              gb|DQ497654.1|  Influenza A virus (A/quail/Tasikmalaya/BPPV4/2...  30.2    0.16 
              gb|DQ497653.1|  Influenza A virus (A/chicken/Purwakarta/BBVet-...  30.2    0.16 
              gb|DQ497651.1|  Influenza A virus (A/chicken/Gunung Kidal/BBVW...  30.2    0.16 
              gb|DQ497650.1|  Influenza A virus (A/chicken/Kulon Progo/BBVet...  30.2    0.16 
              gb|DQ497649.1|  Influenza A virus (A/quail/Yogjakarta/BBVet-IX...  30.2    0.16 
              gb|DQ497648.1|  Influenza A virus (A/chicken/Purworejo/BBVW/20...  30.2    0.16 
              gb|DQ497647.1|  Influenza A virus (A/quail/Boyolali/BPPV4/2004...  30.2    0.16 
              gb|DQ497646.1|  Influenza A virus (A/chicken/Sragen/BPPV4/2003...  30.2    0.16 
              gb|DQ497645.1|  Influenza A virus (A/chicken/Pekalongan/BPPV4/...  30.2    0.16 
              gb|DQ497644.1|  Influenza A virus (A/chicken/Ngawi/BPPV4/2004(...  30.2    0.16 
              gb|DQ497643.1|  Influenza A virus (A/chicken/Magetan/BBVW/2005...  30.2    0.16 
              gb|DQ497642.1|  Influenza A virus (A/chicken/Malang/BBVet-IV/2...  30.2    0.16 
              gb|AY773907.1|  Influenza A virus (A/duck/Hainan/6/2004(H6N2))...  30.2    0.16 
              gb|AY699987.1|  Influenza A virus (A/duck/Hainan/4/2004(H6N2))...  30.2    0.16 
              gb|AY651325.1|  Influenza A virus (A/Ck/Indonesia/5/2004(H5N1)...  30.2    0.16 
              gb|AY651324.1|  Influenza A virus (A/Ck/Indonesia/4/2004(H5N1)...  30.2    0.16 
              gb|AY651323.1|  Influenza A virus (A/Ck/Indonesia/2A/2003(H5N1...  30.2    0.16 
              gb|AY651322.1|  Influenza A virus (A/Dk/Indonesia/MS/2004(H5N1...  30.2    0.16 
              gb|AY651321.1|  Influenza A virus (A/Ck/Indonesia/BL/2003(H5N1...  30.2    0.16 
              gb|AY651320.1|  Influenza A virus (A/Ck/Indonesia/PA/2003(H5N1...  30.2    0.16 
              gb|AY497084.1|  Influenza A virus (A/chicken/Puebla/231-5284/9...  30.2    0.16 
              gb|DQ320933.1|  Influenza A virus (A/chicken/Wajo/BBVM/2005(H5...  30.2    0.16 
              gb|DQ320932.1|  Influenza A virus (A/chicken/Bantul/BBVet-I/20...  30.2    0.16 
              gb|DQ320931.1|  Influenza A virus (A/chicken/Kulon Progo/BBVet...  30.2    0.16 
              gb|DQ320930.1|  Influenza A virus (A/chicken/Yogjakarta/BBVet-...  30.2    0.16 
              gb|DQ320929.1|  Influenza A virus (A/chicken/Wonosobo/BPPV4/20...  30.2    0.16 
              gb|DQ320928.1|  Influenza A virus (A/chicken/Salatiga/BBVet-I/...  30.2    0.16 
              gb|DQ320894.1|  Influenza A virus (A/chicken/Guangxi/2448/2004...  30.2    0.16 
              gb|DQ320876.1|  Influenza A virus (A/chicken/Fujian/1042/2005(...  30.2    0.16 
              gb|CY008988.1|  Influenza A virus (A/Denver/57(H1N1)) segment ...  30.2    0.16 
              gb|AF455677.1|  Influenza A virus (A/Swine/North Carolina/9352...  30.2    0.16 
              gb|CY005735.1|  Influenza A virus (A/duck/NZL/160/1976(H1N3)) ...  30.2    0.16 
              gb|CY004490.1|  Influenza A virus (A/mallard duck/ALB/965/1979...  30.2    0.16 
              gb|AF305218.1|AF305218  Influenza A virus (A/Denver/1/57(H1N1)...  30.2    0.16 
              gb|DQ256383.1|  Influenza A virus (A/parrot/CA/6032/04(H5N2)) ...  30.2    0.16 
              gb|AF091313.1|AF091313  Influenza A virus (A/duck/Bavaria/1/77...  30.2    0.16 
              gb|AF091312.1|AF091312  Influenza A virus (A/duck/Australia/74...  30.2    0.16 
              gb|U47309.1|IAU47309  Influenza A virus (A/duck/Australia/749/...  30.2    0.16 
              gb|U47308.1|IAU47308  Influenza A virus (A/duck/Bavaria/2/77(H...  30.2    0.16 
              gb|DQ285546.1|  Influenza A virus (A/duck/HB/4/2002(H6N2)) hem...  30.2    0.16 
              dbj|D00839.1|FLA196HA  Influenza A virus (A/duck/HK/196/1977(H...  30.2    0.16 
              dbj|D00838.1|FLA36HA  Influenza A virus (A/duck/HK/36/1976(H1)...  30.2    0.16

              Comment


              • #8
                Re: _|PLOS: Evidence of Infection by H5N2 Highly Pathogenic Avian Influenza Viruses in Healthy Wild Waterfowl|_

                gb|EU544248.1| Influenza A virus (A/spur-winged goose/Nigeria... 40.1 4e-04
                gb|EU544247.1| Influenza A virus (A/white-faced whistling duc... 40.1 4e-04
                gb|EU544244.1| Influenza A virus (A/spur-winged goose/Nigeria... 40.1 4e-04
                gb|EU544242.1| Influenza A virus (A/spur-winged goose/Nigeria... 40.1 4e-04
                dbj|AB241618.2| Influenza A virus (A/swan/Hokkaido/67/1996(H5... 40.1 4e-04
                gb|EU496392.1| Influenza A virus (A/duck/Egypt/07322S-NLQP/20... 40.1 4e-04
                gb|EU496393.1| Influenza A virus (A/goose/Egypt/07364S-NLQP/2... 40.1 4e-04
                gb|CY028966.1| Influenza A virus (A/duck/Hunan/378/2003(H5N1)... 40.1 4e-04
                gb|CY028965.1| Influenza A virus (A/duck/Hunan/300/2003(H5N1)... 40.1 4e-04
                gb|EU401796.1| Influenza A virus (A/peacock/Mansehra-Pakistan... 40.1 4e-04
                gb|EF591757.1| Influenza A virus (A/ostrich/South Africa/AI11... 40.1 4e-04
                gb|EF591749.1| Influenza A virus (A/ostrich/South Africa/AI10... 40.1 4e-04
                dbj|AB355929.1| Influenza A virus (A/duck/Hokkaido/Vac-3/2007... 40.1 4e-04
                gb|EU095032.1| Influenza A virus (A/Egypt/4226-NAMRU3/2007(H5... 40.1 4e-04
                gb|EU095031.1| Influenza A virus (A/Egypt/4082-NAMRU3/2007(H5... 40.1 4e-04
                gb|EU095030.1| Influenza A virus (A/Egypt/4081-NAMRU3/2007(H5... 40.1 4e-04
                gb|EU095028.1| Influenza A virus (A/Egypt/2750-NAMRU3/2007(H5... 40.1 4e-04
                gb|CY024746.1| Influenza A virus (A/duck/Italy/775/2004(H5N3)... 40.1 4e-04
                gb|EF597260.1| Influenza A virus (A/migratory duck/Jiang Xi/1... 40.1 4e-04
                gb|EF597253.1| Influenza A virus (A/duck/Hong Kong/819/1980(H... 40.1 4e-04
                gb|EF597251.1| Influenza A virus (A/duck/Hong Kong/342/1978(H... 40.1 4e-04
                gb|EF597250.1| Influenza A virus (A/duck/Hong Kong/698/1979(H... 40.1 4e-04
                gb|EF597248.1| Influenza A virus (A/duck/Hong Kong/312/1978(H... 40.1 4e-04
                gb|EF597247.1| Influenza A virus (A/duck/Hong Kong/23/1976(H5... 40.1 4e-04
                gb|CY022645.1| Influenza A virus (A/teal/Italy/3812/2005(H5N3... 40.1 4e-04
                gb|CY022637.1| Influenza A virus (A/teal/Italy/3931-38/2005(H... 40.1 4e-04
                gb|EF535825.1| Influenza A virus (A/Egypt/2620-NAMRU3/2007(H5... 40.1 4e-04
                gb|EF535824.1| Influenza A virus (A/Egypt/2616-NAMRU3/2007(H5... 40.1 4e-04
                gb|EF535823.1| Influenza A virus (A/Egypt/2331-NAMRU3/2007(H5... 40.1 4e-04
                gb|EF535822.1| Influenza A virus (A/Egypt/2321-NAMRU3/2007(H5... 40.1 4e-04
                gb|EF535817.1| Influenza A virus (A/Egypt/1394-NAMRU3/2007(H5... 40.1 4e-04
                emb|AJ972673.1| Influenza A virus (A/duck/France/05057b/2005(... 40.1 4e-04
                emb|AJ971298.1| Influenza A virus (A/duck/France/05054a/2005(... 40.1 4e-04
                gb|CY021397.1| Influenza A virus (A/mallard/Italy/3401/2005(H... 40.1 4e-04
                gb|CY021381.1| Influenza A virus (A/turkey/Italy/1980(H5N2)) ... 40.1 4e-04
                gb|DQ993032.1| Influenza A virus (A/goose/Guangxi/1786/2006(H... 40.1 4e-04
                gb|DQ992925.1| Influenza A virus (A/goose/Shantou/3624/2006(H... 40.1 4e-04
                gb|DQ992781.1| Influenza A virus (A/goose/Shantou/2086/2006(H... 40.1 4e-04
                gb|DQ992778.1| Influenza A virus (A/goose/Shantou/239/2006(H5... 40.1 4e-04
                gb|DQ885612.1| Influenza A virus (A/Thailand/NKNP/2005(H5N1))... 40.1 4e-04
                gb|CY014984.1| Influenza A virus (A/tern/South Africa/1961(H5... 40.1 4e-04
                gb|CY014642.1| Influenza A virus (A/duck/Potsdam/1402-6/1986(... 40.1 4e-04
                gb|CY014615.1| Influenza A virus (A/duck/Hong Kong/205/1977(H... 40.1 4e-04
                gb|DQ851561.1| Influenza A virus (A/teal/Italy/3931/2005(H5N2... 40.1 4e-04
                gb|DQ838509.1| Influenza A virus (A/teal/Italy/3812/2005(H5N3... 40.1 4e-04
                gb|DQ838508.1| Influenza A virus (A/mallard/Italy/3401/2005(H... 40.1 4e-04
                gb|AY651353.1| Influenza A virus (A/Ck/HK/2133.1/2003(H5N1)) ... 40.1 4e-04
                gb|AY500365.1| Influenza A virus (A/turkey/England/N28/73 (H5... 40.1 4e-04
                gb|AF082039.1| Influenza A virus (A/duck/Hong Kong/698/79(H5N... 40.1 4e-04
                gb|AF082041.1| Influenza A virus (A/duck/Potsdam/2216-4/1984(... 40.1 4e-04
                gb|AF082042.1| Influenza A virus (A/duck/Potsdam/1402-6/86(H5... 40.1 4e-04
                gb|AF082038.1| Influenza A virus (A/duck/Hong Kong/205/77(H5N... 40.1 4e-04
                gb|U20460.1|IAU20460 Influenza A virus (A/tern/South Africa/6... 40.1 4e-04
                gb|U20475.1|IAU20475 Influenza A virus (A/duck/Hong Kong/342/... 40.1 4e-04
                dbj|AB241626.1| Influenza A virus (A/duck/Hokkaido/299/04(H5N... 40.1 4e-04
                dbj|AB241625.1| Influenza A virus (A/duck/Hokkaido/193/04(H5N... 40.1 4e-04
                dbj|AB241624.1| Influenza A virus (A/duck/Hokkaido/101/04(H5N... 40.1 4e-04
                dbj|AB241620.1| Influenza A virus (A/duck/Hokkaido/447/00(H5N... 40.1 4e-04
                dbj|AB241619.1| Influenza A virus (A/duck/Hokkaido/69/00(H5N3... 40.1 4e-04
                dbj|AB241617.1| Influenza A virus (A/swan/Hokkaido/51/96(H5N3... 40.1 4e-04
                dbj|AB241616.1| Influenza A virus (A/swan/Hokkaido/4/96(H5N3)... 40.1 4e-04
                dbj|AB241615.1| Influenza A virus (A/duck/Miyagi/54/76(H5N3))... 40.1 4e-04
                gb|DQ387854.1| Influenza A virus (A/mallard/Bavaria/1/2005(H5... 40.1 4e-04
                emb|X07869.1|INFAHA12 Influenza A virus (A/chicken/Scotland/5... 40.1 4e-04
                emb|X07826.1|ORAIVHA Influenza A virus (A/chicken/Scotland/59... 40.1 4e-04
                gb|CY006036.1| Influenza A virus (A/duck/Potsdam/2216-4/1984(... 40.1 4e-04
                gb|CY005575.1| Influenza A virus (A/duck/Hong Kong/342/1978(H... 40.1 4e-04
                gb|AY737304.1| Influenza A virus (A/duck/Guangdong/173/04(H5N... 40.1 4e-04
                gb|AF290443.1|AF290443 Influenza A virus (A/Duck/Ho Chi Minh/... 40.1 4e-04
                gb|J02160.1|FLAHAMR Influenza A virus (A/shearwater/Australia... 40.1 4e-04

                Comment


                • #9
                  Re: _|PLOS: Evidence of Infection by H5N2 Highly Pathogenic Avian Influenza Viruses in Healthy Wild Waterfowl|_

                  gb|EU544248.1| Influenza A virus (A/spur-winged goose/Nigeria... 38.2 0.002
                  gb|EU544247.1| Influenza A virus (A/white-faced whistling duc... 38.2 0.002
                  gb|EU544244.1| Influenza A virus (A/spur-winged goose/Nigeria... 38.2 0.002
                  gb|EU544242.1| Influenza A virus (A/spur-winged goose/Nigeria... 38.2 0.002
                  gb|EF591757.1| Influenza A virus (A/ostrich/South Africa/AI11... 38.2 0.002
                  gb|EF591749.1| Influenza A virus (A/ostrich/South Africa/AI10... 38.2 0.002
                  gb|DQ251447.1| Influenza A virus (A/duck/Denmark/65047/04(H5N... 38.2 0.002

                  Comment


                  • #10
                    Re: _|PLOS: Evidence of Infection by H5N2 Highly Pathogenic Avian Influenza Viruses in Healthy Wild Waterfowl|_

                    gb|EU544248.1| Influenza A virus (A/spur-winged goose/Nigeria... 44.1 4e-05
                    gb|EU544247.1| Influenza A virus (A/white-faced whistling duc... 44.1 4e-05
                    gb|EU544244.1| Influenza A virus (A/spur-winged goose/Nigeria... 44.1 4e-05
                    gb|EU544242.1| Influenza A virus (A/spur-winged goose/Nigeria... 44.1 4e-05
                    gb|CY021397.1| Influenza A virus (A/mallard/Italy/3401/2005(H... 44.1 4e-05
                    gb|DQ838508.1| Influenza A virus (A/mallard/Italy/3401/2005(H... 44.1 4e-05

                    Comment


                    • #11
                      Re: _|PLOS: Evidence of Infection by H5N2 Highly Pathogenic Avian Influenza Viruses in Healthy Wild Waterfowl|_

                      gb|EU544248.1| Influenza A virus (A/spur-winged goose/Nigeria... 36.2 0.005
                      gb|EU544244.1| Influenza A virus (A/spur-winged goose/Nigeria... 36.2 0.005
                      gb|EU544242.1| Influenza A virus (A/spur-winged goose/Nigeria... 36.2 0.005
                      gb|EF591757.1| Influenza A virus (A/ostrich/South Africa/AI11... 36.2 0.005
                      gb|EF591749.1| Influenza A virus (A/ostrich/South Africa/AI10... 36.2 0.005
                      gb|CY024746.1| Influenza A virus (A/duck/Italy/775/2004(H5N3)... 36.2 0.005
                      gb|CY022645.1| Influenza A virus (A/teal/Italy/3812/2005(H5N3... 36.2 0.005
                      gb|CY022637.1| Influenza A virus (A/teal/Italy/3931-38/2005(H... 36.2 0.005
                      emb|AJ972673.1| Influenza A virus (A/duck/France/05057b/2005(... 36.2 0.005
                      gb|EF042623.1| Influenza A virus (A/teal/Egypt/9885-NAMRU3/20... 36.2 0.005
                      gb|DQ851561.1| Influenza A virus (A/teal/Italy/3931/2005(H5N2... 36.2 0.005
                      gb|DQ838509.1| Influenza A virus (A/teal/Italy/3812/2005(H5N3... 36.2 0.005
                      emb|AM087222.1| Influenza A virus (A/mallard/Germany/WV1349/0... 36.2 0.005
                      gb|DQ387854.1| Influenza A virus (A/mallard/Bavaria/1/2005(H5... 36.2 0.005

                      Comment


                      • #12
                        Re: _|PLOS: Evidence of Infection by H5N2 Highly Pathogenic Avian Influenza Viruses in Healthy Wild Waterfowl|_

                        gb|EU544248.1| Influenza A virus (A/spur-winged goose/Nigeria... 36.2 0.005
                        gb|EU544247.1| Influenza A virus (A/white-faced whistling duc... 36.2 0.005
                        gb|EU544244.1| Influenza A virus (A/spur-winged goose/Nigeria... 36.2 0.005
                        gb|EU544242.1| Influenza A virus (A/spur-winged goose/Nigeria... 36.2 0.005
                        dbj|AB436736.1| Influenza A virus (A/whooper swan/Akita/2008(... 36.2 0.005
                        gb|EU743135.1| Influenza A virus (A/emu/NY/12716/1994(H5N9)) ... 36.2 0.005
                        gb|EU676174.1| Influenza A virus (A/chicken/Primorje/1/2008(H... 36.2 0.005
                        dbj|AB436902.1| Influenza A virus (A/whooper swan/Hokkaido/2/... 36.2 0.005
                        dbj|AB436550.1| Influenza A virus (A/whooper swan/Hokkaido/1/... 36.2 0.005
                        gb|CY028981.1| Influenza A virus (A/chicken/Yunnan/1628/2003(... 36.2 0.005
                        gb|CY028972.1| Influenza A virus (A/duck/Yunnan/971/2002(H5N1... 36.2 0.005
                        gb|CY028971.1| Influenza A virus (A/duck/Yunnan/862/2002(H5N1... 36.2 0.005
                        gb|CY028955.1| Influenza A virus (A/silky chicken/Shantou/540... 36.2 0.005
                        gb|CY028954.1| Influenza A virus (A/chicken/Shantou/133/2003(... 36.2 0.005
                        gb|CY028952.1| Influenza A virus (A/pheasant/Shantou/4567/200... 36.2 0.005
                        gb|CY028945.1| Influenza A virus (A/partridge/Shantou/1075/20... 36.2 0.005
                        gb|EU263345.1| Influenza A virus (A/duck/Guangxi/12/2003(H5N1... 36.2 0.005
                        gb|EF591757.1| Influenza A virus (A/ostrich/South Africa/AI11... 36.2 0.005
                        gb|EF591749.1| Influenza A virus (A/ostrich/South Africa/AI10... 36.2 0.005
                        gb|CY028708.1| Influenza A virus (A/chicken/Vietnam/23/2004(H... 36.2 0.005
                        gb|EU124171.1| Influenza A virus (A/Duck/Vietnam/Soc Trang 68... 36.2 0.005
                        gb|CY024746.1| Influenza A virus (A/duck/Italy/775/2004(H5N3)... 36.2 0.005
                        gb|EF523695.1| Influenza A virus (A/great crested grebe/Denma... 36.2 0.005
                        gb|EF597265.1| Influenza A virus (A/chicken/Italy/9097/1997(H... 36.2 0.005
                        gb|EF597253.1| Influenza A virus (A/duck/Hong Kong/819/1980(H... 36.2 0.005
                        gb|EF597252.1| Influenza A virus (A/goose/Hong Kong/23/1978(H... 36.2 0.005
                        gb|EF597251.1| Influenza A virus (A/duck/Hong Kong/342/1978(H... 36.2 0.005
                        gb|EF597250.1| Influenza A virus (A/duck/Hong Kong/698/1979(H... 36.2 0.005
                        gb|EF597249.1| Influenza A virus (A/duck/Hong Kong/394/1978(H... 36.2 0.005
                        gb|EF597248.1| Influenza A virus (A/duck/Hong Kong/312/1978(H... 36.2 0.005
                        gb|EF597247.1| Influenza A virus (A/duck/Hong Kong/23/1976(H5... 36.2 0.005
                        gb|CY022621.1| Influenza A virus (A/chicken/Italy/22A/1998(H5... 36.2 0.005
                        gb|CY022645.1| Influenza A virus (A/teal/Italy/3812/2005(H5N3... 36.2 0.005
                        gb|CY022637.1| Influenza A virus (A/teal/Italy/3931-38/2005(H... 36.2 0.005
                        gb|EF535818.1| Influenza A virus (A/Egypt/1604-NAMRU3/2007(H5... 36.2 0.005
                        gb|EF541400.1| Influenza A virus (A/goose/Viet Nam/324/2001(H... 36.2 0.005
                        gb|EF541399.1| Influenza A virus (A/goose/Viet Nam/113/2001(H... 36.2 0.005
                        emb|AJ972673.1| Influenza A virus (A/duck/France/05057b/2005(... 36.2 0.005
                        emb|AJ971298.1| Influenza A virus (A/duck/France/05054a/2005(... 36.2 0.005
                        emb|AM408214.1| Influenza A virus (A/teal/Germany/WV632/2005(... 36.2 0.005
                        gb|CY021397.1| Influenza A virus (A/mallard/Italy/3401/2005(H... 36.2 0.005
                        gb|DQ251447.1| Influenza A virus (A/duck/Denmark/65047/04(H5N... 36.2 0.005
                        gb|DQ993105.1| Influenza A virus (A/goose/Yunnan/2190/2006(H5... 36.2 0.005
                        gb|DQ993096.1| Influenza A virus (A/duck/Guiyang/3210/2006(H5... 36.2 0.005
                        gb|DQ993095.1| Influenza A virus (A/chicken/Guiyang/3199/2006... 36.2 0.005
                        gb|DQ993094.1| Influenza A virus (A/chicken/Guiyang/3193/2006... 36.2 0.005
                        gb|DQ993092.1| Influenza A virus (A/chicken/Guiyang/2872/2006... 36.2 0.005
                        gb|DQ993091.1| Influenza A virus (A/duck/Guiyang/2647/2006(H5... 36.2 0.005
                        gb|DQ993090.1| Influenza A virus (A/duck/Guiyang/2199/2006(H5... 36.2 0.005
                        gb|DQ993078.1| Influenza A virus (A/duck/Guiyang/2453/2006(H5... 36.2 0.005
                        gb|DQ993060.1| Influenza A virus (A/goose/Yunnan/1798/2006(H5... 36.2 0.005
                        gb|DQ993058.1| Influenza A virus (A/goose/Yunnan/1562/2006(H5... 36.2 0.005
                        gb|DQ993055.1| Influenza A virus (A/duck/Guiyang/3515/2006(H5... 36.2 0.005
                        gb|DQ993054.1| Influenza A virus (A/goose/Guiyang/3435/2006(H... 36.2 0.005
                        gb|DQ993053.1| Influenza A virus (A/duck/Guiyang/3353/2006(H5... 36.2 0.005
                        gb|DQ993052.1| Influenza A virus (A/goose/Guiyang/3283/2006(H... 36.2 0.005
                        gb|DQ993048.1| Influenza A virus (A/goose/Guiyang/2839/2006(H... 36.2 0.005
                        gb|DQ993047.1| Influenza A virus (A/duck/Guiyang/2757/2006(H5... 36.2 0.005
                        gb|DQ993045.1| Influenza A virus (A/goose/Guiyang/2502/2006(H... 36.2 0.005
                        gb|DQ993044.1| Influenza A virus (A/duck/Guiyang/2489/2006(H5... 36.2 0.005
                        gb|DQ992967.1| Influenza A virus (A/goose/Yunnan/1371/2006(H5... 36.2 0.005
                        gb|DQ992916.1| Influenza A virus (A/duck/Guiyang/326/2006(H5N... 36.2 0.005
                        gb|DQ992910.1| Influenza A virus (A/goose/Guiyang/4180/2005(H... 36.2 0.005
                        gb|DQ992909.1| Influenza A virus (A/goose/Guiyang/4045/2005(H... 36.2 0.005
                        gb|DQ992817.1| Influenza A virus (A/goose/Yunnan/1338/2006(H5... 36.2 0.005
                        gb|DQ992814.1| Influenza A virus (A/goose/Yunnan/1136/2006(H5... 36.2 0.005
                        gb|CY015081.1| Influenza A virus (A/chicken/Scotland/1959(H5N... 36.2 0.005
                        gb|CY014984.1| Influenza A virus (A/tern/South Africa/1961(H5... 36.2 0.005
                        gb|CY014642.1| Influenza A virus (A/duck/Potsdam/1402-6/1986(... 36.2 0.005
                        gb|CY014615.1| Influenza A virus (A/duck/Hong Kong/205/1977(H... 36.2 0.005
                        gb|DQ188906.1| Influenza A virus (A/black bulbul/Fujian/439/0... 36.2 0.005
                        gb|DQ851561.1| Influenza A virus (A/teal/Italy/3931/2005(H5N2... 36.2 0.005
                        gb|DQ838509.1| Influenza A virus (A/teal/Italy/3812/2005(H5N3... 36.2 0.005
                        gb|DQ838508.1| Influenza A virus (A/mallard/Italy/3401/2005(H... 36.2 0.005
                        gb|DQ497676.1| Influenza A virus (A/chicken/Vietnam/348/2005(... 36.2 0.005
                        gb|DQ497675.1| Influenza A virus (A/mallard/Vietnam/347/2005(... 36.2 0.005
                        emb|AM087222.1| Influenza A virus (A/mallard/Germany/WV1349/0... 36.2 0.005
                        gb|AY531029.1| Influenza A virus (A/mallard/Denmark/64650/03(... 36.2 0.005
                        gb|AY651337.1| Influenza A virus (A/chicken/Viet Nam/33/2004(... 36.2 0.005
                        gb|AY995891.1| Influenza A virus (A/mallard/Sweden/39/02(H5N3... 36.2 0.005
                        gb|AY995884.1| Influenza A virus (A/mallard/Sweden/7/02(H5N2)... 36.2 0.005
                        gb|AY995883.1| Influenza A virus (A/mallard/Sweden/2/02(H5N2)... 36.2 0.005
                        gb|AY500365.1| Influenza A virus (A/turkey/England/N28/73 (H5... 36.2 0.005
                        gb|AF082039.1| Influenza A virus (A/duck/Hong Kong/698/79(H5N... 36.2 0.005
                        gb|AF082042.1| Influenza A virus (A/duck/Potsdam/1402-6/86(H5... 36.2 0.005
                        gb|AF082038.1| Influenza A virus (A/duck/Hong Kong/205/77(H5N... 36.2 0.005
                        gb|U20460.1|IAU20460 Influenza A virus (A/tern/South Africa/6... 36.2 0.005
                        gb|U20475.1|IAU20475 Influenza A virus (A/duck/Hong Kong/342/... 36.2 0.005
                        dbj|AB241615.1| Influenza A virus (A/duck/Miyagi/54/76(H5N3))... 36.2 0.005
                        gb|DQ387854.1| Influenza A virus (A/mallard/Bavaria/1/2005(H5... 36.2 0.005
                        gb|CY006028.1| Influenza A virus (A/goose/Hong Kong/23/1978(H... 36.2 0.005
                        gb|CY005575.1| Influenza A virus (A/duck/Hong Kong/342/1978(H... 36.2 0.005
                        gb|AF194992.1|AF194992 Influenza A virus (A/Chicken/Italy/909... 36.2 0.005
                        gb|DQ007623.1| Influenza A virus (A/Anas platyrhynchos/Chany ... 36.2 0.005
                        gb|AF290443.1|AF290443 Influenza A virus (A/Duck/Ho Chi Minh/... 36.2 0.005
                        gb|AF098543.1|AF098543 Influenza A virus (A/Duck/Hong Kong/p4... 36.2 0.005
                        gb|AY684894.1| Influenza A virus (A/mallard/Netherlands/3/99(... 36.2 0.005

                        Comment


                        • #13
                          Re: _|PLOS: Evidence of Infection by H5N2 Highly Pathogenic Avian Influenza Viruses in Healthy Wild Waterfowl|_

                          Comment

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