Re: July San Paolo Sequence Released
Dr Niman
what are your thoughts on possible rate of spread of this mutation - artical says it's new info - but i suspect we have heard of this in limited way a few yrs ago - what are your thoughts on possability for Q136K to become aquired by swine flu virus and or to continue it's spread in seasonal H1N1 resulting in more widespread resistance to relenza- will it potentially spread in same way or as efficiently as H274Y
first evidence of Relenza-resistant flu
<TABLE cellSpacing=0 cellPadding=1><TBODY><TR><TD class=defaulttext vAlign=top>by Jared Reed
Australian researchers have reported what they say is the first evidence of resistance to zanamivir (Relenza) in seasonal influenza A (H1N1) strains.
Writing in the Journal of Virology,researchers from the Melbourne-based WHO Collaborating Centre for Influenza say their analysis of 391 samples of H1N1 influenza virus from the region found that nine (2.3% had a markedly reduced zanamivir susceptibility.
The H1N1 samples were collected from patients who were not being treated with the drug, and the resistance appeared to be conferred by a previously undescribed neuraminidase mutation known as Q136K. The mutation was unique to zanamivir and would not confer resistance to oseltamvir, they write.
They note that there have been many reports of oseltamivir-resistant seasonal A (H1N1) viruses but until now there have been none relating to zanamivir.
“The recent spread of oseltamivir-resistant A(H1N1) viruses ... has shown that neuraminidase resistant viruses can spread rapidly and circulate widely in the global community,” they warn.
And given that the neuraminidase resistance mutations have no apparent impact on viral fitness, “there is concern that one or both of the mutations may occur in highly pathogenic avian influenza A(H5N1) viruses thereby reducing the effectiveness of neuraminidase inhibitor treatment of infected patients,” they say.
“Both oseltamivir (Tamiflu) and zanamivir (Relenza) have been stockpiled by many countries worldwide for use in the event of an influenza pandemic. It is therefore essential that the neuraminidase inhibitor sensitivity of A(H5N1) avian influenza viruses is constantly monitored so that the potential effectiveness of available treatments is known,” they conclude.
</TD></TR></TBODY></TABLE>
3 August 2009
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July San Paolo Sequence Released
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Re: July San Paolo Sequence Released
Originally posted by niman View Post
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Re: July San Paolo Sequence Released
While expanding the PA tree, I ran across an isolate form paraguay which has the following travel log
gb|CY042402.1| Influenza A virus (A/mallard/Minnesota/Sg-0046... 30.1 0.33
gb|GQ365423.1| Influenza A virus (A/Fukushima/1/2009(H1N1)) s... 30.1 0.33
gb|CY035425.1| Influenza A virus (A/swine/Minnesota/SG-00237/... 30.1 0.33
gb|CY034137.1| Influenza A virus (A/WSN/1933(H1N1)) segment 3... 30.1 0.33
gb|EU743140.1| Influenza A virus (A/emu/NY/12716/1994(H5N9)) ... 30.1 0.33
gb|CY032915.1| Influenza A virus (A/northern shoveler/Califor... 30.1 0.33
gb|CY029742.1| Influenza A virus (A/Muscovy duck/Vietnam/54/2... 30.1 0.33
gb|EU015991.1| Influenza A virus (A/swine/Guangxi/13/2006(H1N... 30.1 0.33
gb|CY021714.1| Influenza A virus (A/AA/Huston/1945(H1N1)) seg... 30.1 0.33
gb|CY020466.1| Influenza A virus (A/Iowa/1943(H1N1)) segment ... 30.1 0.33
gb|CY020450.1| Influenza A virus (A/Henry/1936(H1N1)) segment... 30.1 0.33
gb|CY020290.1| Influenza A virus (A/AA/Marton/1943(H1N1)) seg... 30.1 0.33
gb|CY015150.1| Influenza A virus (A/shorebird/Delaware/224/19... 30.1 0.33
gb|CY013276.1| Influenza A virus (A/Hickox/1940(H1N1)) segmen... 30.1 0.33
gb|CY010793.1| Influenza A virus (A/WSN/1933 TS61(H1N1)) segm... 30.1 0.33
gb|DQ508904.1| Influenza A virus (A/Wilson-Smith/1933(H1N1)) ... 30.1 0.33
gb|CY009601.1| Influenza A virus (A/Cam/46(H1N1)) segment 3, ... 30.1 0.33
gb|CY009457.1| Influenza A virus (A/Weiss/43(H1N1)) segment 3... 30.1 0.33
gb|CY009617.1| Influenza A virus (A/FortMonmouth/1/47(H1N1)) ... 30.1 0.33
gb|CY009609.1| Influenza A virus (A/Wilson-Smith/33(H1N1)) se... 30.1 0.33
gb|AY790302.1| Influenza A virus (A/swine/Korea/S190/2004(H9N... 30.1 0.33
gb|CY009281.1| Influenza A virus (A/Bel/1942(H1N1)) segment 3... 30.1 0.33
gb|CY009329.1| Influenza A virus (A/Melbourne/35(H1N1)) segme... 30.1 0.33
dbj|D12779.1|FLAPA2 Influenza A virus (A/WSN/33(H1N1)) genomi... 30.1 0.33
dbj|D12778.1|FLAPA1 Influenza A virus (A/WSN/33(H1N1)) genomi... 30.1 0.33
dbj|D10574.1|FLADI3 Influenza A virus (A/WSN/1933(H1N1)) PA g... 30.1 0.33
dbj|D10573.1|FLADI2 Influenza A virus (A/WSN/1933(H1N1)) PA g... 30.1 0.33
dbj|D10572.1|FLADI1 Influenza A virus (A/WSN/1933(H1N1)) PA g... 30.1 0.33
gb|CY005863.1| Influenza A virus (A/gull/Minnesota/945/1980(H... 30.1 0.33
emb|AJ238020.1| Influenza A virus (A/FM/1/47(H1N1)) PA gene f... 30.1 0.33
emb|X99039.1| Influenza A virus (STRAIN A/FORT MONMOUTH/1/47)... 30.1 0.33
gb|L41511.1|FLAPAWSN Influenza A virus A/WSN (H1N1) (clone DI... 30.1 0.33
emb|X17336.1| Influenza A virus (A/WSN/1933(H1N1)) PA gene fo... 30.1 0.33
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Re: July San Paolo Sequence Released
On a conceptually related note, a set of sequences (A/Tomsk/01/2009) from Russia were just released. It has another polymorphism which traces to seasonal flu, and that polymorphism is found in the Tamiflu resistant sequence from Hong Kong, ex San Franciso (bolded in list below).
Although this change is also synonymous, it signals interactions between swine and human and these signals were present in the 2006/2007 season. Although the sequences from the US were largely the New Caledonia strain (Clade 1), they had picked up a number of new polymorphisms which traced back to swine. Moreover, the sequences with these novel changes were almost exclusively in the US, raising a red flag that human / swine interactions in 2006/2007 were significantly higher than indicated by the rare detection of swine H1N1 infections in humans (which were reported 13 time in the US in the last three years).
The polymorphism below also highlights the rapid spread of the sequence which was the precusor to the fit H274Y is also in Hong Kong. It was initally seen in the US in April, but has since been reported in multiple countries, including Hong Kong, Japan, and Sweden in travelers from the US, but the US has not released any such recent sequences, raising serious surveillance issues. The US now rarely tests mild cases, which can rapidly move polymorphsms from location to location.
A/Tomsk/01/2009
gb|GQ421204.1| Influenza A virus (A/Ancona/05/2009(H1N1)) seg... 35.6 0.008
gb|GQ409646.1| Influenza A virus (A/Athens/2294/2009(H1N1)) s... 35.6 0.008
gb|GQ396511.1| Influenza A virus (A/Changsha/05/2009(H1N1)) s... 35.6 0.008
gb|GQ379856.1| Influenza A virus (A/Catalonia/517/2009(H1N1))... 35.6 0.008
gb|GQ379852.1| Influenza A virus (A/Catalonia/502/2009(H1N1))... 35.6 0.008
gb|GQ379840.1| Influenza A virus (A/Catalonia/476/2009(H1N1))... 35.6 0.008
gb|GQ379833.1| Influenza A virus (A/Catalonia/442/2009(H1N1))... 35.6 0.008
gb|GQ369275.1| Influenza A virus (A/Stockholm/37/2009(H1N1)) ... 35.6 0.008
gb|GQ365448.1| Influenza A virus (A/Sapporo/1/2009(H1N1)) seg... 35.6 0.008
gb|GQ355297.1| Influenza A virus (A/Catalonia/387/2009(H1N1))... 35.6 0.008
gb|GQ351316.1| Influenza A virus (A/Hong Kong/2369/2009(H1N1)... 35.6 0.008
gb|GQ338380.1| Influenza A virus (A/Oklahoma/03/2009(H1N1)) s... 35.6 0.008
gb|CY041452.1| Influenza A virus (A/California/UR06-0439/2007... 35.6 0.008
gb|GQ160533.1| Influenza A virus (A/New Jersey/01/2009(H1N1))... 35.6 0.008
gb|EU409969.1| Influenza A virus (A/swine/Ohio/K1207/06(H1N1)... 35.6 0.008
gb|EU516136.1| Influenza A virus (A/New Mexico/05/2007(H1N1))... 35.6 0.008
gb|EU516135.1| Influenza A virus (A/Alaska/01/2007(H1N1)) seg... 35.6 0.008
gb|CY028774.1| Influenza A virus (A/Virginia/UR06-0361/2007(H... 35.6 0.008
gb|CY028461.1| Influenza A virus (A/California/UR06-0442/2007... 35.6 0.008
gb|CY028421.1| Influenza A virus (A/Illinois/UR06-0215/2007(H... 35.6 0.008
gb|CY028405.1| Influenza A virus (A/Ohio/UR06-0429/2007(H1N1)... 35.6 0.008
gb|EU158122.1| Influenza A virus (A/mallard/Italy/250/02(H7N1... 35.6 0.008
gb|CY028149.1| Influenza A virus (A/Kentucky/UR06-0182/2007(H... 35.6 0.008
gb|CY028141.1| Influenza A virus (A/Kansas/UR06-0191/2007(H1N... 35.6 0.008
gb|CY028069.1| Influenza A virus (A/Illinois/UR06-0093/2007(H... 35.6 0.008
gb|CY027941.1| Influenza A virus (A/Virginia/UR06-0295/2007(H... 35.6 0.008
gb|CY027845.1| Influenza A virus (A/California/UR06-0125/2007... 35.6 0.008
gb|CY027821.1| Influenza A virus (A/Illinois/UR06-0074/2007(H... 35.6 0.008
gb|CY027765.1| Influenza A virus (A/Ohio/UR06-0112/2007(H1N1)... 35.6 0.008
gb|CY027709.1| Influenza A virus (A/Virginia/UR06-0549/2007(H... 35.6 0.008
gb|CY027701.1| Influenza A virus (A/Illinois/UR06-0131/2007(H... 35.6 0.008
gb|CY027677.1| Influenza A virus (A/Kentucky/UR06-0449/2007(H... 35.6 0.008
gb|CY027373.1| Influenza A virus (A/Kentucky/UR06-0424/2007(H... 35.6 0.008
gb|CY027485.1| Influenza A virus (A/Illinois/UR06-0115/2007(H... 35.6 0.008
gb|CY027469.1| Influenza A virus (A/Ohio/UR06-0394/2007(H1N1)... 35.6 0.008
gb|CY027437.1| Influenza A virus (A/Illinois/UR06-0094/2007(H... 35.6 0.008
gb|CY027421.1| Influenza A virus (A/Tennessee/UR06-0262/2007(... 35.6 0.008
gb|CY027397.1| Influenza A virus (A/Illinois/UR06-0136/2007(H... 35.6 0.008
gb|CY027357.1| Influenza A virus (A/California/UR06-0564/2007... 35.6 0.008
gb|CY027277.1| Influenza A virus (A/Illinois/UR06-0116/2007(H... 35.6 0.008
gb|CY027245.1| Influenza A virus (A/Tennessee/UR06-0124/2007(... 35.6 0.008
gb|CY027237.1| Influenza A virus (A/Virginia/UR06-0117/2007(H... 35.6 0.008
gb|CY027229.1| Influenza A virus (A/Colorado/UR06-0499/2007(H... 35.6 0.008
gb|CY027213.1| Influenza A virus (A/California/UR06-0585/2007... 35.6 0.008
gb|CY027149.1| Influenza A virus (A/North Carolina/UR06-0011/... 35.6 0.008
gb|CY027141.1| Influenza A virus (A/Ohio/UR06-0177/2007(H1N1)... 35.6 0.008
gb|CY027093.1| Influenza A virus (A/Illinois/UR06-0137/2007(H... 35.6 0.008
gb|CY026981.1| Influenza A virus (A/Kentucky/UR06-0161/2007(H... 35.6 0.008
gb|CY026973.1| Influenza A virus (A/Illinois/UR06-0095/2007(H... 35.6 0.008
gb|CY026909.1| Influenza A virus (A/Virginia/UR06-0254/2007(H... 35.6 0.008
gb|CY026861.1| Influenza A virus (A/North Carolina/UR06-0099/... 35.6 0.008
gb|CY026797.1| Influenza A virus (A/Illinois/UR06-0491/2007(H... 35.6 0.008
gb|CY026645.1| Influenza A virus (A/New York/UR06-0253/2007(H... 35.6 0.008
gb|CY026533.1| Influenza A virus (A/California/UR06-0302/2007... 35.6 0.008
gb|CY026357.1| Influenza A virus (A/California/UR06-0232/2007... 35.6 0.008
gb|EU199401.1| Influenza A virus (A/Illinois/02/2006(H1N1)) s... 35.6 0.008
gb|EU199399.1| Influenza A virus (A/Wisconsin/51/2006(H1N1)) ... 35.6 0.008
gb|EU199394.1| Influenza A virus (A/Wisconsin/48/2006(H1N1)) ... 35.6 0.008
gb|EU199392.1| Influenza A virus (A/Wisconsin/49/2006(H1N1)) ... 35.6 0.008
gb|EU199390.1| Influenza A virus (A/Illinois/01/2006(H1N1)) s... 35.6 0.008
gb|CY026229.1| Influenza A virus (A/Kentucky/UR06-0538/2007(H... 35.6 0.008
gb|CY026221.1| Influenza A virus (A/Kentucky/UR06-0028/2007(H... 35.6 0.008
gb|CY025941.1| Influenza A virus (A/Kentucky/UR06-0539/2007(H... 35.6 0.008
gb|CY025669.1| Influenza A virus (A/Kentucky/UR06-0553/2007(H... 35.6 0.008
gb|CY025589.1| Influenza A virus (A/Texas/UR06-0526/2007(H1N1... 35.6 0.008
gb|CY025495.1| Influenza A virus (A/Kentucky/UR06-0042/2007(H... 35.6 0.008
gb|CY025439.1| Influenza A virus (A/Illinois/UR06-0333/2007(H... 35.6 0.008
gb|CY025375.1| Influenza A virus (A/California/UR06-0435/2007... 35.6 0.008
gb|CY025287.1| Influenza A virus (A/New York/UR06-0386/2007(H... 35.6 0.008
gb|CY025223.1| Influenza A virus (A/Michigan/UR06-0015/2006(H... 35.6 0.008
gb|EU021263.1| Influenza A virus (A/Thailand/CU75/2006(H1N1))... 35.6 0.008
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Re: July San Paolo Sequence Released
Thanks for the summary Dr Niman.
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Re: July San Paolo Sequence Released
Thanks, Dr. Niman, for your analysis.
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Re: July San Paolo Sequence Released
Many have asked for a "summary" of the genetic changes in Sao Paulo and Argentina, and both are works in progress. The Sao Paulo sequence of interest is from the first fatal case (11F) reported, and only the HA sequence was released. It had three changes and two of the three encoded protein (non-synonymous) changes. One had been seen previosly in pandemic H1N1 from a host of locations, including Sao Paulo from an earlier (and therefore non-fatal) case, and the synonymous change was also see in pandemic H1N1, but a different sub-clade. The tracing of the three changes to three different sources strong supported recombination, and the first change V252M generated the most attention because it had not been previously reported in pandemic H1N1, but was in a 2001 Hong Kong swine sequence, as was the non-synonympus change, further supporting acquisitions by recombination.
The genetic change that created V252M (which changed the first position in codon 252 is also present in the 1918 sequences at Genbank (as well as human H1N1 sequences circulating prior to the 1957 pandemic, and seasonal flu circulating in Peru in 2006). These sequences had changes at the third position of codon 252 in addition to the first position, so they had V252I,
The significance of V252M is unclear because there have been no subsequent sequences from fatal cases in Brazil, but there have been a large number of subsequent deaths in Sao Paulo. I have heard via rumor that testing of the Sao Paulo isolate with ferret sera directed against the vaccine traget did not produce a lower titer (which is my interpretation of a 3rd party comment that the change had no effect on the vaccine). However, that statement, if true, addresses immunogenicity, and not virulence. Thus, it is a bit early to draw conclusions about genetic changes in Sao Paulo, but a clear marker has been laid down, and future sequences from fatal cases in Brazil will be of interest.
On a related note are the sequneces being made public at Columbia University (Ian Lipskin) from Argentina, were there has also been a jump in fatal cases in young adults. The data is being released early on an "as is" basis. Full (or nearly full) sequences on all 8 gene segments from 11 patients have been released thus far and the most striking finding is the same genetic change in the PA sequence from all 11 cases. When all sequences from a region have the same change, the change is either early, important, or both. On the surface, the change is early, because it is synonymous (doesn't change the sequence of the PA protein). However, genetic changes can have additional effects, including undiscovered genes or peptides in open reading frame regions of the gene segment, or nucleotide protein interactions, etc.
The genetic change is traced to avian, which is expected since PA is avian in the pandemic sequences. It also provides compelling evidence for recombination, because one of the isolates from Argentina has an adjacent change, found in the same avian (and three swine) donor sequences. Moreover since the change is almost certainly early, it indicates other changes in the Argentina sequences are also due to recombination, including a polymorphism previously link to pandemic sequences from Japan, which are also on the same PA gene segment in one Argentina isolate.
On the virulence / transmission front, four of the sequences from Argentina have a change in N1 (C894T) which is in seasonal flu (New Caledonia clade - see travel log below). This may be signaling adaptation to a human host, and is of concern because it is in four of the Argentina isolates (and not in other pandemic H1N1 sequences).
More details later.
C894T
7785-Argentina-2009-S6-NA-4
9576-Argentina-2009-S6-NA-6
9588-Argentina-2009-S6-NA-5
9711-Argentina-2009-S6-NA-9
gb|EU871822.1| Influenza A virus (A/turkey/Ontario/84/1983(H5... 28.2 179
gb|CY041452.1| Influenza A virus (A/California/UR06-0439/2007... 28.2 179
gb|EU409969.1| Influenza A virus (A/swine/Ohio/K1207/06(H1N1)... 28.2 179
gb|EU516136.1| Influenza A virus (A/New Mexico/05/2007(H1N1))... 28.2 179
gb|EU516135.1| Influenza A virus (A/Alaska/01/2007(H1N1)) seg... 28.2 179
gb|CY028774.1| Influenza A virus (A/Virginia/UR06-0361/2007(H... 28.2 179
gb|EU516136.1| Influenza A virus (A/New Mexico/05/2007(H1N1))... 28.2 179
gb|EU516135.1| Influenza A virus (A/Alaska/01/2007(H1N1)) seg... 28.2 179
gb|CY028774.1| Influenza A virus (A/Virginia/UR06-0361/2007(H... 28.2 179
gb|CY028461.1| Influenza A virus (A/California/UR06-0442/2007... 28.2 179
gb|CY028421.1| Influenza A virus (A/Illinois/UR06-0215/2007(H... 28.2 179
gb|CY028405.1| Influenza A virus (A/Ohio/UR06-0429/2007(H1N1)... 28.2 179
gb|CY028149.1| Influenza A virus (A/Kentucky/UR06-0182/2007(H... 28.2 179
gb|CY028141.1| Influenza A virus (A/Kansas/UR06-0191/2007(H1N... 28.2 179
gb|CY028069.1| Influenza A virus (A/Illinois/UR06-0093/2007(H... 28.2 179
gb|CY027941.1| Influenza A virus (A/Virginia/UR06-0295/2007(H... 28.2 179
gb|CY027845.1| Influenza A virus (A/California/UR06-0125/2007... 28.2 179
gb|CY027821.1| Influenza A virus (A/Illinois/UR06-0074/2007(H... 28.2 179
gb|CY027765.1| Influenza A virus (A/Ohio/UR06-0112/2007(H1N1)... 28.2 179
gb|CY027709.1| Influenza A virus (A/Virginia/UR06-0549/2007(H... 28.2 179
gb|CY027701.1| Influenza A virus (A/Illinois/UR06-0131/2007(H... 28.2 179
gb|CY027677.1| Influenza A virus (A/Kentucky/UR06-0449/2007(H... 28.2 179
gb|CY027373.1| Influenza A virus (A/Kentucky/UR06-0424/2007(H... 28.2 179
gb|CY027485.1| Influenza A virus (A/Illinois/UR06-0115/2007(H... 28.2 179
gb|CY027469.1| Influenza A virus (A/Ohio/UR06-0394/2007(H1N1)... 28.2 179
gb|CY027437.1| Influenza A virus (A/Illinois/UR06-0094/2007(H... 28.2 179
gb|CY027421.1| Influenza A virus (A/Tennessee/UR06-0262/2007(... 28.2 179
gb|CY027397.1| Influenza A virus (A/Illinois/UR06-0136/2007(H... 28.2 179
gb|CY027357.1| Influenza A virus (A/California/UR06-0564/2007... 28.2 179
gb|CY027277.1| Influenza A virus (A/Illinois/UR06-0116/2007(H... 28.2 179
gb|CY027245.1| Influenza A virus (A/Tennessee/UR06-0124/2007(... 28.2 179
gb|CY027237.1| Influenza A virus (A/Virginia/UR06-0117/2007(H... 28.2 179
gb|CY027229.1| Influenza A virus (A/Colorado/UR06-0499/2007(H... 28.2 179
gb|CY027213.1| Influenza A virus (A/California/UR06-0585/2007... 28.2 179
gb|CY027149.1| Influenza A virus (A/North Carolina/UR06-0011/... 28.2 179
gb|CY027141.1| Influenza A virus (A/Ohio/UR06-0177/2007(H1N1)... 28.2 179
gb|CY027093.1| Influenza A virus (A/Illinois/UR06-0137/2007(H... 28.2 179
gb|CY026981.1| Influenza A virus (A/Kentucky/UR06-0161/2007(H... 28.2 179
gb|CY026973.1| Influenza A virus (A/Illinois/UR06-0095/2007(H... 28.2 179
gb|CY026909.1| Influenza A virus (A/Virginia/UR06-0254/2007(H... 28.2 179
gb|CY026861.1| Influenza A virus (A/North Carolina/UR06-0099/... 28.2 179
gb|CY026797.1| Influenza A virus (A/Illinois/UR06-0491/2007(H... 28.2 179
gb|CY026645.1| Influenza A virus (A/New York/UR06-0253/2007(H... 28.2 179
gb|CY026533.1| Influenza A virus (A/California/UR06-0302/2007... 28.2 179
gb|CY026357.1| Influenza A virus (A/California/UR06-0232/2007... 28.2 179
gb|EU199401.1| Influenza A virus (A/Illinois/02/2006(H1N1)) s... 28.2 179
gb|EU199399.1| Influenza A virus (A/Wisconsin/51/2006(H1N1)) ... 28.2 179
gb|EU199394.1| Influenza A virus (A/Wisconsin/48/2006(H1N1)) ... 28.2 179
gb|EU199392.1| Influenza A virus (A/Wisconsin/49/2006(H1N1)) ... 28.2 179
gb|EU199391.1| Influenza A virus (A/Nebraska/02/2007(H1N1)) s... 28.2 179
gb|EU199390.1| Influenza A virus (A/Illinois/01/2006(H1N1)) s... 28.2 179
gb|CY026229.1| Influenza A virus (A/Kentucky/UR06-0538/2007(H... 28.2 179
gb|CY026221.1| Influenza A virus (A/Kentucky/UR06-0028/2007(H... 28.2 179
gb|CY025941.1| Influenza A virus (A/Kentucky/UR06-0539/2007(H... 28.2 179
gb|CY025669.1| Influenza A virus (A/Kentucky/UR06-0553/2007(H... 28.2 179
gb|CY025597.1| Influenza A virus (A/Illinois/UR06-0415/2007(H... 28.2 179
gb|CY025589.1| Influenza A virus (A/Texas/UR06-0526/2007(H1N1... 28.2 179
gb|CY025495.1| Influenza A virus (A/Kentucky/UR06-0042/2007(H... 28.2 179
gb|CY025439.1| Influenza A virus (A/Illinois/UR06-0333/2007(H... 28.2 179
gb|CY025375.1| Influenza A virus (A/California/UR06-0435/2007... 28.2 179
gb|CY025287.1| Influenza A virus (A/New York/UR06-0386/2007(H... 28.2 179
gb|CY025223.1| Influenza A virus (A/Michigan/UR06-0015/2006(H... 28.2 179
gb|EU021263.1| Influenza A virus (A/Thailand/CU75/2006(H1N1))... 28.2 179
gb|CY014752.1| Influenza A virus (A/turkey/Minnesota/799/1980... 28.2 179
gb|AY207544.1| Influenza A virus (A/gull/Maryland/4/77(H6N1))... 28.2 179
gb|AY207543.1| Influenza A virus (A/hawk/Maryland/1/77(H6N1))... 28.2 179
gb|AY207532.1| Influenza A virus (A/turkey/Minnesota/1265/80(... 28.2 179
gb|CY004962.1| Influenza A virus (A/mallard duck/ALB/291/1977... 28.2 179
gb|CY004711.1| Influenza A virus (A/mallard duck/ALB/26/1976(... 28.2 179
gb|CY005805.1| Influenza A virus (A/mallard duck/ALB/35/1976(... 28.2 179
gb|CY004594.1| Influenza A virus (A/mallard duck/ALB/127/1977... 28.2 179
gb|CY004492.1| Influenza A virus (A/mallard duck/ALB/965/1979... 28.2 179
gb|CY004484.1| Influenza A virus (A/pintail duck/ALB/238/1979... 28.2 179
gb|CY004476.1| Influenza A virus (A/pintail duck/ALB/219/1977... 28.2 179
gb|CY004468.1| Influenza A virus (A/mallard duck/ALB/46/1977(... 28.2 179
gb|CY004291.1| Influenza A virus (A/mallard duck/ALB/65/1976(... 28.2 179
gb|CY004144.1| Influenza A virus (A/mallard duck/ALB/730/1981... 28.2 179
Leave a comment:
-
Re: July San Paolo Sequence Released
PB1 travel log
C297T in 12 and 11f isolates from Argentina
gb|EU794493.1| Influenza A virus (A/equine/Gansu/7/2008(H3N8)... 38.2 0.19
gb|EU794501.1| Influenza A virus (A/equine/Hubei/6/2008(H3N8)... 38.2 0.19
gb|EU794509.1| Influenza A virus (A/equine/Heilongjiang/10/20... 38.2 0.19
gb|EU794517.1| Influenza A virus (A/equine/Liaoning/9/2008(H3... 38.2 0.19
gb|EU794525.1| Influenza A virus (A/equine/Inner Mongolia/8/2... 38.2 0.19
gb|EU794533.1| Influenza A virus (A/equine/Qinghai/1/1994(H3N... 38.2 0.19
gb|EU794541.1| Influenza A virus (A/equine/Xinjiang/1/2007(H3... 38.2 0.19
gb|EU794549.1| Influenza A virus (A/equine/Xinjiang/2/2007(H3... 38.2 0.19
gb|EU794557.1| Influenza A virus (A/equine/Xinjiang/3/2007(H3... 38.2 0.19
gb|EU794565.1| Influenza A virus (A/equine/Xinjiang/4/2007(H3... 38.2 0.19
gb|EU794573.1| Influenza A virus (A/equine/Xinjiang/5/2007(H3... 38.2 0.19
gb|CY041456.1| Influenza A virus (A/California/UR06-0439/2007... 38.2 0.19
gb|CY041448.1| Influenza A virus (A/Texas/UR06-0323/2007(H1N1... 38.2 0.19
gb|CY041344.1| Influenza A virus (A/common eider/Netherlands/... 38.2 0.19
gb|CY041224.1| Influenza A virus (A/Managua/1225.02/2008(H1N1... 38.2 0.19
gb|CY041216.1| Influenza A virus (A/Managua/2512.01/2008(H1N1... 38.2 0.19
gb|GQ122491.1| Influenza A virus (A/chicken/Central Java/UT30... 38.2 0.19
gb|CY041112.1| Influenza A virus (A/New York/3178/2009(H1N1))... 38.2 0.19
gb|GQ168857.1| Influenza A virus (A/Kansas/03/2009(H1N1)) seg... 38.2 0.19
gb|CY040296.1| Influenza A virus (A/Managua/3570.01/2008(H1N1... 38.2 0.19
gb|CY040288.1| Influenza A virus (A/Managua/4412.01/2008(H1N1... 38.2 0.19
gb|CY040280.1| Influenza A virus (A/Managua/4924.01/2008(H1N1... 38.2 0.19
gb|CY040272.1| Influenza A virus (A/Managua/309.01/2008(H1N1)... 38.2 0.19
gb|CY040264.1| Influenza A virus (A/Managua/3759.02/2008(H1N1... 38.2 0.19
gb|CY040256.1| Influenza A virus (A/Managua/3153.01/2008(H1N1... 38.2 0.19
gb|CY040248.1| Influenza A virus (A/Managua/3307.01/2008(H1N1... 38.2 0.19
gb|CY040240.1| Influenza A virus (A/Managua/2860.01/2008(H1N1... 38.2 0.19
gb|CY040232.1| Influenza A virus (A/Managua/2055.01/2008(H1N1... 38.2 0.19
gb|CY040192.1| Influenza A virus (A/Managua/1038.01/2008(H1N1... 38.2 0.19
gb|CY040184.1| Influenza A virus (A/Managua/4341.01/2008(H1N1... 38.2 0.19
gb|CY040168.1| Influenza A virus (A/Managua/3180.01/2008(H1N1... 38.2 0.19
gb|CY040120.1| Influenza A virus (A/Taiwan/70167/2008(H1N1)) ... 38.2 0.19
gb|CY040112.1| Influenza A virus (A/Taiwan/70132/2008(H1N1)) ... 38.2 0.19
gb|CY040096.1| Influenza A virus (A/Taiwan/70013/2008(H1N1)) ... 38.2 0.19
gb|CY040064.1| Influenza A virus (A/Taiwan/71720/2007(H1N1)) ... 38.2 0.19
gb|FJ200418.1| Influenza A virus (A/swine/Anhui/01/2006(H3N8)... 38.2 0.19
gb|FJ200426.1| Influenza A virus (A/swine/Chibi/01/2005(H3N8)... 38.2 0.19
gb|CY039453.1| Influenza A virus (A/Managua/4315.04/2008(H1N1... 38.2 0.19
gb|CY039485.1| Influenza A virus (A/Managua/4086.02/2008(H1N1... 38.2 0.19
gb|CY039477.1| Influenza A virus (A/Managua/3027.01/2008(H1N1... 38.2 0.19
gb|CY039469.1| Influenza A virus (A/Managua/156.01/2008(H1N1)... 38.2 0.19
gb|CY039461.1| Influenza A virus (A/Managua/5214.01/2008(H1N1... 38.2 0.19
gb|CY038768.1| Influenza A virus (A/District of Columbia/WRAM... 38.2 0.19
gb|CY038760.1| Influenza A virus (A/District of Columbia/WRAM... 38.2 0.19
gb|CY039157.1| Influenza A virus (A/Managua/5380.01/2008(H1N1... 38.2 0.19
gb|CY039149.1| Influenza A virus (A/Managua/254.01/2008(H1N1)... 38.2 0.19
gb|CY039141.1| Influenza A virus (A/Managua/1409.01/2008(H1N1... 38.2 0.19
gb|CY039133.1| Influenza A virus (A/Managua/521.01/2008(H1N1)... 38.2 0.19
gb|CY039125.1| Influenza A virus (A/Managua/3029.01/2008(H1N1... 38.2 0.19
gb|CY038933.1| Influenza A virus (A/Managua/4537.03/2008(H1N1... 38.2 0.19
gb|CY038925.1| Influenza A virus (A/Managua/107.01/2008(H1N1)... 38.2 0.19
gb|CY038885.1| Influenza A virus (A/Taiwan/2645/2006(H1N1)) s... 38.2 0.19
gb|CY038813.1| Influenza A virus (A/Florida/UR07-0026/2008(H1... 38.2 0.19
gb|CY038541.1| Influenza A virus (A/Managua/4032.01/2008(H1N1... 38.2 0.19
gb|FJ798791.1| Influenza A virus (A/Nyiregyhaza/01/2007(H1N1)... 38.2 0.19
gb|CY037789.1| Influenza A virus (A/Tennessee/UR06-0106/2007(... 38.2 0.19
gb|CY037781.1| Influenza A virus (A/Tennessee/UR06-0379/2007(... 38.2 0.19
gb|CY037701.1| Influenza A virus (A/Kentucky/UR07-0061/2008(H... 38.2 0.19
gb|CY037669.1| Influenza A virus (A/Kentucky/UR06-0369/2007(H... 38.2 0.19
gb|CY037661.1| Influenza A virus (A/Ohio/UR06-0493/2007(H1N1)... 38.2 0.19
gb|CY037477.1| Influenza A virus (A/Virginia/UR06-0065/2007(H... 38.2 0.19
gb|CY037469.1| Influenza A virus (A/Vermont/UR06-0513/2007(H1... 38.2 0.19
gb|CY037461.1| Influenza A virus (A/Vermont/UR06-0330/2007(H1... 38.2 0.19
gb|CY037453.1| Influenza A virus (A/Florida/UR06-0265/2007(H1... 38.2 0.19
gb|CY037445.1| Influenza A virus (A/Texas/UR06-0422/2007(H1N1... 38.2 0.19
gb|CY037341.1| Influenza A virus (A/Japan/AF07/2008(H1N1)) se... 38.2 0.19
gb|CY037333.1| Influenza A virus (A/Washington/AF06/2007(H1N1... 38.2 0.19
gb|FJ264991.1| Influenza A virus (A/Denmark/21/2008(H1N1)) se... 38.2 0.19
gb|FJ264990.1| Influenza A virus (A/Denmark/22/2007(H1N1)) se... 38.2 0.19
gb|FJ264989.1| Influenza A virus (A/Denmark/52/2008(H1N1)) se... 38.2 0.19
gb|FJ264988.1| Influenza A virus (A/Denmark/122/2008(H1N1)) s... 38.2 0.19
gb|FJ264987.1| Influenza A virus (A/Denmark/151/2008(H1N1)) s... 38.2 0.19
gb|CY036861.1| Influenza A virus (A/Texas/UR06-0156/2007(H1N1... 38.2 0.19
gb|FJ445037.1| Influenza A virus (A/England/654/2007(H1N1)) s... 38.2 0.19
gb|FJ445026.1| Influenza A virus (A/England/557/2007(H1N1)) s... 38.2 0.19
gb|FJ445084.1| Influenza A virus (A/England/26/2008(H1N1)) se... 38.2 0.19
gb|FJ445083.1| Influenza A virus (A/England/545/2007(H1N1)) s... 38.2 0.19
gb|FJ445034.1| Influenza A virus (A/England/593/2006(H1N1)) s... 38.2 0.19
gb|FJ445040.1| Influenza A virus (A/England/514/2006(H1N1)) s... 38.2 0.19
gb|FJ445055.1| Influenza A virus (A/England/594/2006(H1N1)) s... 38.2 0.19
gb|FJ445068.1| Influenza A virus (A/England/494/2006(H1N1)) s... 38.2 0.19
gb|CY035132.1| Influenza A virus (A/St. Petersburg/8/2006(H1N... 38.2 0.19
gb|CY033471.1| Influenza A virus (A/Oregon/UR06-0609/2007(H1N... 38.2 0.19
gb|CY032959.1| Influenza A virus (A/equine/Johannesburg/1/198... 38.2 0.19
gb|CY032943.1| Influenza A virus (A/equine/Kentucky/2/1980(H3... 38.2 0.19
gb|CY032331.1| Influenza A virus (A/equine/Rook/93753/1989(H3... 38.2 0.19
gb|CY032323.1| Influenza A virus (A/equine/Sussex/1/1989(H3N8... 38.2 0.19
gb|CY032419.1| Influenza A virus (A/equine/Berlin/1/1989(H3N8... 38.2 0.19
gb|CY032379.1| Influenza A virus (A/equine/Italy/1062/1991(H3... 38.2 0.19
gb|CY032371.1| Influenza A virus (A/equine/Roma/5/1991(H3N8))... 38.2 0.19
gb|CY032363.1| Influenza A virus (A/equine/Switzerland/173/19... 38.2 0.19
gb|CY032355.1| Influenza A virus (A/equine/Austria/421/1992(H... 38.2 0.19
gb|CY032347.1| Influenza A virus (A/equine/Italy/1199/1992(H3... 38.2 0.19
gb|CY032339.1| Influenza A virus (A/equine/Italy/824/1991(H3N... 38.2 0.19
gb|CY032315.1| Influenza A virus (A/equine/Santa Fe/1/1985(H3... 38.2 0.19
gb|CY032307.1| Influenza A virus (A/equine/Cordoba/18/1985(H3... 38.2 0.19
gb|CY032235.1| Influenza A virus (A/equine/Kentucky/3/1986(H3... 38.2 0.19
gb|CY032227.1| Influenza A virus (A/equine/Kentucky/2/1986(H3... 38.2 0.19
gb|EU534200.1| Influenza A virus (A/canine/Miami/2005(H3N8)) ... 38.2 0.19
gb|EU534194.1| Influenza A virus (A/canine/Jacksonville/2005(... 38.2 0.19
gb|CY031577.1| Influenza A virus (A/Ohio/UR06-0591/2007(H1N1)... 38.2 0.19
gb|CY031544.1| Influenza A virus (A/equine/Kentucky/2/1987(H3... 38.2 0.19
gb|CY031536.1| Influenza A virus (A/Kansas/UR06-0102/2007(H1N... 38.2 0.19
gb|CY031549.1| Influenza A virus (A/Virginia/UR06-0107/2007(H... 38.2 0.19
gb|CY031154.1| Influenza A virus (A/Ohio/UR06-0178/2007(H1N1)... 38.2 0.19
gb|CY031146.1| Influenza A virus (A/Tennessee/UR06-0236/2007(... 38.2 0.19
gb|CY031138.1| Influenza A virus (A/Virginia/UR06-0228/2007(H... 38.2 0.19
gb|EU097792.1| Influenza A virus (A/Denmark/22/05(H1N1)) poly... 38.2 0.19
gb|EU097786.1| Influenza A virus (A/Denmark/16/04(H1N1)) poly... 38.2 0.19
gb|EU097785.1| Influenza A virus (A/Denmark/49/06(H1N1)) poly... 38.2 0.19
gb|EU097784.1| Influenza A virus (A/Denmark/47/06(H1N1)) poly... 38.2 0.19
gb|CY030765.1| Influenza A virus (A/equine/California/8560/20... 38.2 0.19
gb|CY030757.1| Influenza A virus (A/equine/California/4537/19... 38.2 0.19
gb|CY030749.1| Influenza A virus (A/equine/Kentucky/Rosie100/... 38.2 0.19
gb|CY030733.1| Influenza A virus (A/Kentucky/UR06-0070/2007(H... 38.2 0.19
gb|CY030187.1| Influenza A virus (A/equine/Kentucky/8/1994(H3... 38.2 0.19
gb|CY030179.1| Influenza A virus (A/equine/Kentucky/1/1991(H3... 38.2 0.19
gb|CY030171.1| Influenza A virus (A/equine/Tennessee/5/1986(H... 38.2 0.19
gb|CY030163.1| Influenza A virus (A/equine/Alaska/29759/1991(... 38.2 0.19
gb|CY030155.1| Influenza A virus (A/equine/Kentucky/1/1992(H3... 38.2 0.19
gb|CY030147.1| Influenza A virus (A/equine/Texas/39655/1991(H... 38.2 0.19
gb|CY030139.1| Influenza A virus (A/equine/Kentucky/1277/1990... 38.2 0.19
gb|CY030131.1| Influenza A virus (A/equine/Kentucky/698/1988(... 38.2 0.19
gb|CY030123.1| Influenza A virus (A/equine/Kentucky/694/1988(... 38.2 0.19
gb|CY030115.1| Influenza A virus (A/equine/Kentucky/692/1988(... 38.2 0.19
gb|CY030107.1| Influenza A virus (A/equine/Kentucky/1/1987(H3... 38.2 0.19
gb|CY030099.1| Influenza A virus (A/equine/Kentucky/1/1986(H3... 38.2 0.19
gb|CY030091.1| Influenza A virus (A/equine/California/83/1982... 38.2 0.19
gb|CY030083.1| Influenza A virus (A/equine/Kentucky/3/1981(H3... 38.2 0.19
gb|CY030075.1| Influenza A virus (A/Kansas/UR06-0103/2007(H1N... 38.2 0.19
gb|CY030067.1| Influenza A virus (A/Ohio/UR06-0296/2007(H1N1)... 38.2 0.19
gb|EU301431.1| Influenza A virus (A/duck/Korea/LPM92/2006(H3N... 38.2 0.19
gb|EU301430.1| Influenza A virus (A/duck/Korea/LPM91/2006(H3N... 38.2 0.19
gb|EU301429.1| Influenza A virus (A/chicken/Korea/LPM88/2006(... 38.2 0.19
gb|EU301427.1| Influenza A virus (A/chicken/Korea/LPM67/2006(... 38.2 0.19
gb|EU301426.1| Influenza A virus (A/duck/Korea/LPM66/2006(H3N... 38.2 0.19
gb|EU301425.1| Influenza A virus (A/chicken/Korea/LPM61/2005(... 38.2 0.19
gb|EU301421.1| Influenza A virus (A/duck/Korea/LPM39/2005(H3N... 38.2 0.19
gb|EU301420.1| Influenza A virus (A/duck/Korea/LPM38/2005(H3N... 38.2 0.19
gb|EU301419.1| Influenza A virus (A/duck/Korea/LPM36/2005(H3N... 38.2 0.19
gb|CY028914.1| Influenza A virus (A/equine/California/103/198... 38.2 0.19
gb|CY028906.1| Influenza A virus (A/equine/Kentucky/magnifice... 38.2 0.19
gb|CY028898.1| Influenza A virus (A/equine/Georgia/13/1981(H3... 38.2 0.19
gb|CY028890.1| Influenza A virus (A/equine/Georgia/10/1981(H3... 38.2 0.19
gb|CY028882.1| Influenza A virus (A/equine/Georgia/9/1981(H3N... 38.2 0.19
gb|CY028874.1| Influenza A virus (A/equine/Georgia/3/1981(H3N... 38.2 0.19
gb|CY028866.1| Influenza A virus (A/equine/Georgia/1/1981(H3N... 38.2 0.19
gb|CY028858.1| Influenza A virus (A/equine/Kentucky/bitter_bo... 38.2 0.19
gb|CY028850.1| Influenza A virus (A/equine/Kentucky/pass_the_... 38.2 0.19
gb|CY028834.1| Influenza A virus (A/equine/Kentucky/1/1981(H3... 38.2 0.19
gb|CY028826.1| Influenza A virus (A/equine/Kentucky/2/1981(H3... 38.2 0.19
gb|CY028818.1| Influenza A virus (A/equine/California/1/1980(... 38.2 0.19
gb|CY028810.1| Influenza A virus (A/equine/Kentucky/4/1980(H3... 38.2 0.19
gb|CY028778.1| Influenza A virus (A/Virginia/UR06-0361/2007(H... 38.2 0.19
gb|CY028770.1| Influenza A virus (A/Kansas/UR06-0299/2007(H1N... 38.2 0.19
gb|CY028762.1| Influenza A virus (A/Virginia/UR06-0180/2007(H... 38.2 0.19
gb|CY028754.1| Influenza A virus (A/Kentucky/UR06-0372/2007(H... 38.2 0.19
gb|CY028738.1| Influenza A virus (A/California/UR06-0462/2007... 38.2 0.19
gb|CY028473.1| Influenza A virus (A/California/UR06-0552/2007... 38.2 0.19
gb|CY028465.1| Influenza A virus (A/California/UR06-0442/2007... 38.2 0.19
gb|CY028457.1| Influenza A virus (A/Tennessee/UR06-0073/2007(... 38.2 0.19
gb|CY028425.1| Influenza A virus (A/Illinois/UR06-0215/2007(H... 38.2 0.19
gb|CY028417.1| Influenza A virus (A/Virginia/UR06-0346/2007(H... 38.2 0.19
gb|CY028409.1| Influenza A virus (A/Ohio/UR06-0429/2007(H1N1)... 38.2 0.19
gb|CY028401.1| Influenza A virus (A/Tennessee/UR06-0277/2007(... 38.2 0.19
gb|CY028385.1| Influenza A virus (A/Virginia/UR06-0332/2007(H... 38.2 0.19
gb|CY028369.1| Influenza A virus (A/Kansas/UR06-0192/2007(H1N... 38.2 0.19
gb|CY028361.1| Influenza A virus (A/Kentucky/UR06-0181/2007(H... 38.2 0.19
gb|CY028353.1| Influenza A virus (A/Illinois/UR06-0096/2007(H... 38.2 0.19
gb|CY028345.1| Influenza A virus (A/Florida/UR06-0209/2007(H1... 38.2 0.19
gb|CY028329.1| Influenza A virus (A/Texas/UR06-0026/2007(H1N1... 38.2 0.19
gb|CY028321.1| Influenza A virus (A/Texas/UR06-0217/2007(H1N1... 38.2 0.19
gb|CY028313.1| Influenza A virus (A/California/UR06-0479/2007... 38.2 0.19
gb|CY028297.1| Influenza A virus (A/Texas/UR06-0038/2007(H1N1... 38.2 0.19
gb|CY028225.1| Influenza A virus (A/Texas/UR06-0420/2007(H1N1... 38.2 0.19
gb|CY028217.1| Influenza A virus (A/Oregon/UR06-0219/2007(H1N... 38.2 0.19
gb|CY028209.1| Influenza A virus (A/Tennessee/UR06-0055/2007(... 38.2 0.19
gb|CY028201.1| Influenza A virus (A/Kentucky/UR06-0007/2006(H... 38.2 0.19
gb|CY028169.1| Influenza A virus (A/Kentucky/UR06-0258/2007(H... 38.2 0.19
gb|CY028161.1| Influenza A virus (A/Virginia/UR06-0351/2007(H... 38.2 0.19
gb|CY028153.1| Influenza A virus (A/Kentucky/UR06-0182/2007(H... 38.2 0.19
gb|CY028145.1| Influenza A virus (A/Kansas/UR06-0191/2007(H1N... 38.2 0.19
gb|CY028137.1| Influenza A virus (A/Oklahoma/UR06-0519/2007(H... 38.2 0.19
gb|CY028129.1| Influenza A virus (A/Ohio/UR06-0353/2007(H1N1)... 38.2 0.19
gb|CY028121.1| Influenza A virus (A/Tennessee/UR06-0509/2007(... 38.2 0.19
gb|CY028113.1| Influenza A virus (A/Tennessee/UR06-0076/2007(... 38.2 0.19
gb|CY028105.1| Influenza A virus (A/Virginia/UR06-0387/2007(H... 38.2 0.19
gb|CY028097.1| Influenza A virus (A/Tennessee/UR06-0523/2007(... 38.2 0.19
gb|CY028089.1| Influenza A virus (A/Kentucky/UR06-0391/2007(H... 38.2 0.19
gb|CY028081.1| Influenza A virus (A/Tennessee/UR06-0080/2007(... 38.2 0.19
gb|CY028073.1| Influenza A virus (A/Illinois/UR06-0093/2007(H... 38.2 0.19
gb|CY028065.1| Influenza A virus (A/Tennessee/UR06-0238/2007(... 38.2 0.19
gb|CY028057.1| Influenza A virus (A/Kentucky/UR06-0425/2007(H... 38.2 0.19
gb|CY028049.1| Influenza A virus (A/Kentucky/UR06-0401/2007(H... 38.2 0.19
gb|CY028041.1| Influenza A virus (A/Kentucky/UR06-0046/2007(H... 38.2 0.19
gb|CY028033.1| Influenza A virus (A/Ohio/UR06-0522/2007(H1N1)... 38.2 0.19
gb|CY028025.1| Influenza A virus (A/Kentucky/UR06-0162/2007(H... 38.2 0.19
gb|CY028017.1| Influenza A virus (A/Kansas/UR06-0084/2007(H1N... 38.2 0.19
gb|CY028009.1| Influenza A virus (A/Tennessee/UR06-0312/2007(... 38.2 0.19
gb|CY028001.1| Influenza A virus (A/Virginia/UR06-0092/2007(H... 38.2 0.19
gb|CY027993.1| Influenza A virus (A/Ohio/UR06-0411/2007(H1N1)... 38.2 0.19
gb|CY027985.1| Influenza A virus (A/Kansas/UR06-0284/2007(H1N... 38.2 0.19
gb|CY027977.1| Influenza A virus (A/Virginia/UR06-0266/2007(H... 38.2 0.19
gb|CY027969.1| Influenza A virus (A/Oklahoma/UR06-0241/2007(H... 38.2 0.19
gb|CY027961.1| Influenza A virus (A/Oregon/UR06-0185/2007(H1N... 38.2 0.19
gb|CY027945.1| Influenza A virus (A/Virginia/UR06-0295/2007(H... 38.2 0.19
gb|CY027937.1| Influenza A virus (A/Oregon/UR06-0291/2007(H1N... 38.2 0.19
gb|CY027929.1| Influenza A virus (A/Oregon/UR06-0186/2007(H1N... 38.2 0.19
gb|CY027921.1| Influenza A virus (A/Kentucky/UR06-0259/2007(H... 38.2 0.19
gb|CY027913.1| Influenza A virus (A/Illinois/UR06-0475/2007(H... 38.2 0.19
gb|CY027905.1| Influenza A virus (A/Colorado/UR06-0496/2007(H... 38.2 0.19
gb|CY027897.1| Influenza A virus (A/California/UR06-0440/2007... 38.2 0.19
gb|CY027889.1| Influenza A virus (A/Texas/UR06-0503/2007(H1N1... 38.2 0.19
gb|CY027881.1| Influenza A virus (A/Mississippi/UR06-0014/200... 38.2 0.19
gb|CY027865.1| Influenza A virus (A/Virginia/UR06-0360/2007(H... 38.2 0.19
gb|CY027857.1| Influenza A virus (A/Kansas/UR06-0143/2007(H1N... 38.2 0.19
gb|CY027849.1| Influenza A virus (A/California/UR06-0125/2007... 38.2 0.19
gb|CY027841.1| Influenza A virus (A/Kansas/UR06-0085/2007(H1N... 38.2 0.19
gb|CY027833.1| Influenza A virus (A/Virginia/UR06-0075/2007(H... 38.2 0.19
gb|CY027825.1| Influenza A virus (A/Illinois/UR06-0074/2007(H... 38.2 0.19
gb|CY027817.1| Influenza A virus (A/Texas/UR06-0039/2007(H1N1... 38.2 0.19
gb|CY027809.1| Influenza A virus (A/Illinois/UR06-0032/2007(H... 38.2 0.19
gb|CY027793.1| Influenza A virus (A/Illinois/UR06-0227/2007(H... 38.2 0.19
gb|CY027785.1| Influenza A virus (A/Kentucky/UR06-0339/2007(H... 38.2 0.19
gb|CY027777.1| Influenza A virus (A/Oklahoma/UR06-0063/2007(H... 38.2 0.19
gb|CY027769.1| Influenza A virus (A/Ohio/UR06-0112/2007(H1N1)... 38.2 0.19
gb|CY027761.1| Influenza A virus (A/Virginia/UR06-0114/2007(H... 38.2 0.19
gb|CY027753.1| Influenza A virus (A/Tennessee/UR06-0459/2007(... 38.2 0.19
gb|CY027745.1| Influenza A virus (A/Kansas/UR06-0068/2007(H1N... 38.2 0.19
gb|CY027737.1| Influenza A virus (A/Tennessee/UR06-0508/2007(... 38.2 0.19
gb|CY027729.1| Influenza A virus (A/Tennessee/UR06-0113/2007(... 38.2 0.19
gb|CY027713.1| Influenza A virus (A/Virginia/UR06-0549/2007(H... 38.2 0.19
gb|CY027705.1| Influenza A virus (A/Illinois/UR06-0131/2007(H... 38.2 0.19
gb|CY027697.1| Influenza A virus (A/Oregon/UR06-0179/2007(H1N... 38.2 0.19
gb|CY027681.1| Influenza A virus (A/Kentucky/UR06-0449/2007(H... 38.2 0.19
gb|CY027673.1| Influenza A virus (A/Illinois/UR06-0088/2007(H... 38.2 0.19
gb|CY027665.1| Influenza A virus (A/Texas/UR06-0133/2007(H1N1... 38.2 0.19
gb|CY027657.1| Influenza A virus (A/Virginia/UR06-0562/2007(H... 38.2 0.19
gb|CY027649.1| Influenza A virus (A/Virginia/UR06-0297/2007(H... 38.2 0.19
gb|CY027641.1| Influenza A virus (A/Tennessee/UR06-0388/2007(... 38.2 0.19
gb|CY027633.1| Influenza A virus (A/Florida/UR06-0578/2007(H1... 38.2 0.19
gb|CY027625.1| Influenza A virus (A/Texas/UR06-0216/2007(H1N1... 38.2 0.19
gb|CY027617.1| Influenza A virus (A/Florida/UR06-0447/2007(H1... 38.2 0.19
gb|CY027609.1| Influenza A virus (A/New York/UR06-0326/2007(H... 38.2 0.19
gb|CY027601.1| Influenza A virus (A/Texas/UR06-0445/2007(H1N1... 38.2 0.19
gb|CY027561.1| Influenza A virus (A/Texas/UR06-0204/2007(H1N1... 38.2 0.19
gb|CY027377.1| Influenza A virus (A/Kentucky/UR06-0424/2007(H... 38.2 0.19
gb|CY027497.1| Influenza A virus (A/Tennessee/UR06-0473/2007(... 38.2 0.19
gb|CY027489.1| Influenza A virus (A/Illinois/UR06-0115/2007(H... 38.2 0.19
gb|CY027481.1| Influenza A virus (A/Tennessee/UR06-0234/2007(... 38.2 0.19
gb|CY027473.1| Influenza A virus (A/Ohio/UR06-0394/2007(H1N1)... 38.2 0.19
gb|CY027465.1| Influenza A virus (A/Kentucky/UR06-0184/2007(H... 38.2 0.19
gb|CY027457.1| Influenza A virus (A/Tennessee/UR06-0414/2007(... 38.2 0.19
gb|CY027449.1| Influenza A virus (A/Ohio/UR06-0121/2007(H1N1)... 38.2 0.19
gb|CY027441.1| Influenza A virus (A/Illinois/UR06-0094/2007(H... 38.2 0.19
gb|CY027433.1| Influenza A virus (A/Kansas/UR06-0283/2007(H1N... 38.2 0.19
gb|CY027425.1| Influenza A virus (A/Tennessee/UR06-0262/2007(... 38.2 0.19
gb|CY027417.1| Influenza A virus (A/Alabama/UR06-0536/2007(H1... 38.2 0.19
gb|CY027409.1| Influenza A virus (A/Ohio/UR06-0166/2007(H1N1)... 38.2 0.19
gb|CY027401.1| Influenza A virus (A/Illinois/UR06-0136/2007(H... 38.2 0.19
gb|CY027393.1| Influenza A virus (A/Ohio/UR06-0233/2007(H1N1)... 38.2 0.19
gb|CY027385.1| Influenza A virus (A/Tennessee/UR06-0119/2007(... 38.2 0.19
gb|CY027369.1| Influenza A virus (A/Illinois/UR06-0098/2007(H... 38.2 0.19
gb|CY027361.1| Influenza A virus (A/California/UR06-0564/2007... 38.2 0.19
gb|CY027353.1| Influenza A virus (A/Illinois/UR06-0249/2007(H... 38.2 0.19
gb|CY027345.1| Influenza A virus (A/Texas/UR06-0357/2007(H1N1... 38.2 0.19
gb|CY027337.1| Influenza A virus (A/Kentucky/UR06-0220/2007(H... 38.2 0.19
gb|CY027329.1| Influenza A virus (A/Texas/UR06-0342/2007(H1N1... 38.2 0.19
gb|CY027321.1| Influenza A virus (A/Florida/UR06-0208/2007(H1... 38.2 0.19
gb|CY027289.1| Influenza A virus (A/Kentucky/UR06-0371/2007(H... 38.2 0.19
gb|CY027281.1| Influenza A virus (A/Illinois/UR06-0116/2007(H... 38.2 0.19
gb|CY027273.1| Influenza A virus (A/Tennessee/UR06-0239/2007(... 38.2 0.19
gb|CY027257.1| Influenza A virus (A/Tennessee/UR06-0294/2007(... 38.2 0.19
gb|CY027249.1| Influenza A virus (A/Tennessee/UR06-0124/2007(... 38.2 0.19
gb|CY027241.1| Influenza A virus (A/Virginia/UR06-0117/2007(H... 38.2 0.19
gb|CY027233.1| Influenza A virus (A/Colorado/UR06-0499/2007(H... 38.2 0.19
gb|CY027225.1| Influenza A virus (A/Kentucky/UR06-0029/2007(H... 38.2 0.19
gb|CY027217.1| Influenza A virus (A/California/UR06-0585/2007... 38.2 0.19
gb|CY027209.1| Influenza A virus (A/Mississippi/UR06-0047/200... 38.2 0.19
gb|CY027193.1| Influenza A virus (A/Vermont/UR06-0472/2007(H1... 38.2 0.19
gb|CY027185.1| Influenza A virus (A/Texas/UR06-0176/2007(H1N1... 38.2 0.19
gb|CY027177.1| Influenza A virus (A/Kentucky/UR06-0081/2007(H... 38.2 0.19
gb|CY027169.1| Influenza A virus (A/Texas/UR06-0305/2007(H1N1... 38.2 0.19
gb|CY027153.1| Influenza A virus (A/North Carolina/UR06-0011/... 38.2 0.19
gb|CY027145.1| Influenza A virus (A/Ohio/UR06-0177/2007(H1N1)... 38.2 0.19
gb|CY027137.1| Influenza A virus (A/Tennessee/UR06-0120/2007(... 38.2 0.19
gb|CY027121.1| Influenza A virus (A/Tennessee/UR06-0152/2007(... 38.2 0.19
gb|CY027105.1| Influenza A virus (A/Florida/UR06-0049/2007(H1... 38.2 0.19
gb|CY027097.1| Influenza A virus (A/Illinois/UR06-0137/2007(H... 38.2 0.19
gb|CY027089.1| Influenza A virus (A/Oregon/UR06-0230/2007(H1N... 38.2 0.19
gb|CY027073.1| Influenza A virus (A/Ohio/UR06-0443/2007(H1N1)... 38.2 0.19
gb|CY027065.1| Influenza A virus (A/Tennessee/UR06-0151/2007(... 38.2 0.19
gb|CY027057.1| Influenza A virus (A/Kentucky/UR06-0154/2007(H... 38.2 0.19
gb|CY027049.1| Influenza A virus (A/Illinois/UR06-0146/2007(H... 38.2 0.19
gb|CY027041.1| Influenza A virus (A/Kansas/UR06-0104/2007(H1N... 38.2 0.19
gb|CY027033.1| Influenza A virus (A/Virginia/UR06-0244/2007(H... 38.2 0.19
gb|CY027025.1| Influenza A virus (A/Kentucky/UR06-0183/2007(H... 38.2 0.19
gb|CY027017.1| Influenza A virus (A/Kentucky/UR06-0327/2007(H... 38.2 0.19
gb|CY027009.1| Influenza A virus (A/Ohio/UR06-0465/2007(H1N1)... 38.2 0.19
gb|CY026993.1| Influenza A virus (A/Kentucky/UR06-0328/2007(H... 38.2 0.19
gb|CY026985.1| Influenza A virus (A/Kentucky/UR06-0161/2007(H... 38.2 0.19
gb|CY026977.1| Influenza A virus (A/Illinois/UR06-0095/2007(H... 38.2 0.19
gb|CY026969.1| Influenza A virus (A/Texas/UR06-0157/2007(H1N1... 38.2 0.19
gb|CY026961.1| Influenza A virus (A/Ohio/UR06-0091/2007(H1N1)... 38.2 0.19
gb|CY026953.1| Influenza A virus (A/Ohio/UR06-0518/2007(H1N1)... 38.2 0.19
gb|CY026945.1| Influenza A virus (A/Virginia/UR06-0164/2007(H... 38.2 0.19
gb|CY026937.1| Influenza A virus (A/Virginia/UR06-0267/2007(H... 38.2 0.19
gb|CY026921.1| Influenza A virus (A/Virginia/UR06-0384/2007(H... 38.2 0.19
gb|CY026913.1| Influenza A virus (A/Virginia/UR06-0254/2007(H... 38.2 0.19
gb|CY026905.1| Influenza A virus (A/Oregon/UR06-0231/2007(H1N... 38.2 0.19
gb|CY026897.1| Influenza A virus (A/Tennessee/UR06-0078/2007(... 38.2 0.19
gb|CY026881.1| Influenza A virus (A/Kentucky/UR06-0123/2007(H... 38.2 0.19
gb|CY026873.1| Influenza A virus (A/Kentucky/UR06-0127/2007(H... 38.2 0.19
gb|CY026865.1| Influenza A virus (A/North Carolina/UR06-0099/... 38.2 0.19
gb|CY026857.1| Influenza A virus (A/Ohio/UR06-0341/2007(H1N1)... 38.2 0.19
gb|CY026841.1| Influenza A virus (A/Virginia/UR06-0139/2007(H... 38.2 0.19
gb|CY026825.1| Influenza A virus (A/Colorado/UR06-0336/2007(H... 38.2 0.19
gb|CY026817.1| Influenza A virus (A/Kentucky/UR06-0071/2007(H... 38.2 0.19
gb|CY026809.1| Influenza A virus (A/Kentucky/UR06-0058/2007(H... 38.2 0.19
gb|CY026801.1| Influenza A virus (A/Illinois/UR06-0491/2007(H... 38.2 0.19
gb|CY026785.1| Influenza A virus (A/Colorado/UR06-0287/2007(H... 38.2 0.19
gb|CY026769.1| Influenza A virus (A/California/UR06-0321/2007... 38.2 0.19
gb|CY026761.1| Influenza A virus (A/Vermont/UR06-0556/2007(H1... 38.2 0.19
gb|CY026745.1| Influenza A virus (A/Kentucky/UR06-0061/2007(H... 38.2 0.19
gb|CY026737.1| Influenza A virus (A/New York/UR06-0134/2007(H... 38.2 0.19
gb|CY026729.1| Influenza A virus (A/Florida/UR06-0412/2007(H1... 38.2 0.19
gb|CY026721.1| Influenza A virus (A/Texas/UR06-0582/2007(H1N1... 38.2 0.19
gb|CY026705.1| Influenza A virus (A/Tennessee/UR06-0045/2007(... 38.2 0.19
gb|CY026697.1| Influenza A virus (A/Illinois/UR06-0224/2007(H... 38.2 0.19
gb|CY026689.1| Influenza A virus (A/Vermont/UR06-0035/2007(H1... 38.2 0.19
gb|CY026681.1| Influenza A virus (A/California/UR06-0375/2007... 38.2 0.19
gb|CY026665.1| Influenza A virus (A/Florida/UR06-0501/2007(H1... 38.2 0.19
gb|CY026657.1| Influenza A virus (A/Kentucky/UR06-0027/2007(H... 38.2 0.19
gb|CY026649.1| Influenza A virus (A/New York/UR06-0253/2007(H... 38.2 0.19
gb|CY026641.1| Influenza A virus (A/Texas/UR06-0308/2007(H1N1... 38.2 0.19
gb|CY026633.1| Influenza A virus (A/New York/UR06-0199/2007(H... 38.2 0.19
gb|CY026625.1| Influenza A virus (A/Vermont/UR06-0511/2007(H1... 38.2 0.19
gb|CY026617.1| Influenza A virus (A/Illinois/UR06-0376/2007(H... 38.2 0.19
gb|CY026601.1| Influenza A virus (A/Texas/UR06-0309/2007(H1N1... 38.2 0.19
gb|CY026593.1| Influenza A virus (A/Kentucky/UR06-0476/2007(H... 38.2 0.19
gb|CY026585.1| Influenza A virus (A/Colorado/UR06-0110/2007(H... 38.2 0.19
gb|CY026577.1| Influenza A virus (A/Vermont/UR06-0573/2007(H1... 38.2 0.19
gb|CY026569.1| Influenza A virus (A/Texas/UR06-0397/2007(H1N1... 38.2 0.19
gb|CY026553.1| Influenza A virus (A/Florida/UR06-0577/2007(H1... 38.2 0.19
gb|CY026545.1| Influenza A virus (A/California/UR06-0393/2007... 38.2 0.19
gb|CY026537.1| Influenza A virus (A/California/UR06-0302/2007... 38.2 0.19
gb|CY026529.1| Influenza A virus (A/Colorado/UR06-0053/2007(H... 38.2 0.19
gb|CY026521.1| Influenza A virus (A/Kentucky/UR06-0057/2007(H... 38.2 0.19
gb|CY026513.1| Influenza A virus (A/Tennessee/UR06-0087/2007(... 38.2 0.19
gb|CY026505.1| Influenza A virus (A/Texas/UR06-0468/2007(H1N1... 38.2 0.19
gb|CY026409.1| Influenza A virus (A/Texas/UR06-0270/2007(H1N1... 38.2 0.19
gb|CY026401.1| Influenza A virus (A/Mississippi/UR06-0595/200... 38.2 0.19
gb|CY026393.1| Influenza A virus (A/Texas/UR06-0444/2007(H1N1... 38.2 0.19
gb|CY026385.1| Influenza A virus (A/New York/UR06-0056/2007(H... 38.2 0.19
gb|CY026377.1| Influenza A virus (A/Mississippi/UR06-0378/200... 38.2 0.19
gb|CY026369.1| Influenza A virus (A/Texas/UR06-0175/2007(H1N1... 38.2 0.19
gb|CY026361.1| Influenza A virus (A/California/UR06-0232/2007... 38.2 0.19
gb|CY026353.1| Influenza A virus (A/Texas/UR06-0271/2007(H1N1... 38.2 0.19
gb|CY026345.1| Influenza A virus (A/Texas/UR06-0542/2007(H1N1... 38.2 0.19
gb|CY026329.1| Influenza A virus (A/Florida/UR06-0354/2007(H1... 38.2 0.19
gb|CY026321.1| Influenza A virus (A/California/UR06-0374/2007... 38.2 0.19
gb|CY026273.1| Influenza A virus (A/Texas/UR06-0306/2007(H1N1... 38.2 0.19
gb|CY026241.1| Influenza A virus (A/Colorado/UR06-0498/2007(H... 38.2 0.19
gb|CY026233.1| Influenza A virus (A/Kentucky/UR06-0538/2007(H... 38.2 0.19
gb|CY026225.1| Influenza A virus (A/Kentucky/UR06-0028/2007(H... 38.2 0.19
gb|CY026217.1| Influenza A virus (A/Texas/UR06-0195/2007(H1N1... 38.2 0.19
gb|CY026209.1| Influenza A virus (A/Kentucky/UR06-0187/2007(H... 38.2 0.19
gb|CY026193.1| Influenza A virus (A/Texas/UR06-0303/2007(H1N1... 38.2 0.19
gb|CY026185.1| Influenza A virus (A/Illinois/UR06-0223/2007(H... 38.2 0.19
gb|CY026177.1| Influenza A virus (A/Vermont/UR06-0575/2007(H1... 38.2 0.19
gb|CY026017.1| Influenza A virus (A/Ohio/UR06-0122/2007(H1N1)... 38.2 0.19
gb|CY026009.1| Influenza A virus (A/Ohio/UR06-0100/2007(H1N1)... 38.2 0.19
gb|CY026001.1| Influenza A virus (A/Virginia/UR06-0109/2007(H... 38.2 0.19
gb|CY025993.1| Influenza A virus (A/Virginia/UR06-0245/2007(H... 38.2 0.19
gb|CY025985.1| Influenza A virus (A/Kentucky/UR06-0128/2007(H... 38.2 0.19
gb|CY025977.1| Influenza A virus (A/Ohio/UR06-0325/2007(H1N1)... 38.2 0.19
gb|CY025969.1| Influenza A virus (A/Kansas/UR06-0140/2007(H1N... 38.2 0.19
gb|CY025961.1| Influenza A virus (A/Texas/UR06-0174/2007(H1N1... 38.2 0.19
gb|CY025953.1| Influenza A virus (A/Kentucky/UR06-0257/2007(H... 38.2 0.19
gb|CY025945.1| Influenza A virus (A/Kentucky/UR06-0539/2007(H... 38.2 0.19
gb|CY025929.1| Influenza A virus (A/Kentucky/UR06-0034/2007(H... 38.2 0.19
gb|CY025921.1| Influenza A virus (A/Kentucky/UR06-0069/2007(H... 38.2 0.19
gb|CY025897.1| Influenza A virus (A/Mississippi/UR06-0537/200... 38.2 0.19
gb|CY025833.1| Influenza A virus (A/Colorado/UR06-0111/2007(H... 38.2 0.19
gb|CY025825.1| Influenza A virus (A/Vermont/UR06-0574/2007(H1... 38.2 0.19
gb|CY025817.1| Influenza A virus (A/Vermont/UR06-0051/2007(H1... 38.2 0.19
gb|CY025809.1| Influenza A virus (A/Mississippi/UR06-0048/200... 38.2 0.19
gb|CY025801.1| Influenza A virus (A/Vermont/UR06-0089/2007(H1... 38.2 0.19
gb|CY025793.1| Influenza A virus (A/Kentucky/UR06-0033/2007(H... 38.2 0.19
gb|CY025785.1| Influenza A virus (A/Florida/UR06-0383/2007(H1... 38.2 0.19
gb|CY025777.1| Influenza A virus (A/Florida/UR06-0280/2007(H1... 38.2 0.19
gb|CY025769.1| Influenza A virus (A/Vermont/UR06-0485/2007(H1... 38.2 0.19
gb|CY025705.1| Influenza A virus (A/Kentucky/UR06-0043/2007(H... 38.2 0.19
gb|CY025697.1| Influenza A virus (A/Texas/UR06-0359/2007(H1N1... 38.2 0.19
gb|CY025689.1| Influenza A virus (A/Texas/UR06-0193/2007(H1N1... 38.2 0.19
gb|CY025681.1| Influenza A virus (A/Kentucky/UR06-0240/2007(H... 38.2 0.19
gb|CY025673.1| Influenza A virus (A/Kentucky/UR06-0553/2007(H... 38.2 0.19
gb|CY025665.1| Influenza A virus (A/Vermont/UR06-0301/2007(H1... 38.2 0.19
gb|CY025657.1| Influenza A virus (A/Vermont/UR06-0090/2007(H1... 38.2 0.19
gb|CY025641.1| Influenza A virus (A/Kentucky/UR06-0188/2007(H... 38.2 0.19
gb|CY025633.1| Influenza A virus (A/Mississippi/UR06-0086/200... 38.2 0.19
gb|CY025625.1| Influenza A virus (A/Mississippi/UR06-0142/200... 38.2 0.19
gb|CY025601.1| Influenza A virus (A/Illinois/UR06-0415/2007(H... 38.2 0.19
gb|CY025593.1| Influenza A virus (A/Texas/UR06-0526/2007(H1N1... 38.2 0.19
gb|CY025585.1| Influenza A virus (A/Mississippi/UR06-0145/200... 38.2 0.19
gb|CY025577.1| Influenza A virus (A/Illinois/UR06-0248/2007(H... 38.2 0.19
gb|CY025569.1| Influenza A virus (A/Texas/UR06-0461/2007(H1N1... 38.2 0.19
gb|CY025561.1| Influenza A virus (A/Mississippi/UR06-0130/200... 38.2 0.19
gb|CY025553.1| Influenza A virus (A/Texas/UR06-0563/2007(H1N1... 38.2 0.19
gb|CY025539.1| Influenza A virus (A/Florida/UR06-0355/2007(H1... 38.2 0.19
gb|CY025531.1| Influenza A virus (A/Texas/UR06-0196/2007(H1N1... 38.2 0.19
gb|CY025523.1| Influenza A virus (A/Illinois/UR06-0456/2007(H... 38.2 0.19
gb|CY025515.1| Influenza A virus (A/Kentucky/UR06-0097/2007(H... 38.2 0.19
gb|CY025499.1| Influenza A virus (A/Kentucky/UR06-0042/2007(H... 38.2 0.19
gb|CY025475.1| Influenza A virus (A/Vermont/UR06-0576/2007(H1... 38.2 0.19
gb|CY025467.1| Influenza A virus (A/Kentucky/UR06-0129/2007(H... 38.2 0.19
gb|CY025459.1| Influenza A virus (A/Kentucky/UR06-0062/2007(H... 38.2 0.19
gb|CY025451.1| Influenza A virus (A/Texas/UR06-0467/2007(H1N1... 38.2 0.19
gb|CY025443.1| Influenza A virus (A/Illinois/UR06-0333/2007(H... 38.2 0.19
gb|CY025435.1| Influenza A virus (A/Kentucky/UR06-0072/2007(H... 38.2 0.19
gb|CY025411.1| Influenza A virus (A/Colorado/UR06-0207/2007(H... 38.2 0.19
gb|CY025403.1| Influenza A virus (A/Texas/UR06-0203/2007(H1N1... 38.2 0.19
gb|CY025395.1| Influenza A virus (A/Texas/UR06-0398/2007(H1N1... 38.2 0.19
gb|CY025387.1| Influenza A virus (A/Alabama/UR06-0455/2007(H1... 38.2 0.19
gb|CY025379.1| Influenza A virus (A/California/UR06-0435/2007... 38.2 0.19
gb|CY025371.1| Influenza A virus (A/Texas/UR06-0025/2007(H1N1... 38.2 0.19
gb|CY025363.1| Influenza A virus (A/Kentucky/UR06-0363/2007(H... 38.2 0.19
gb|CY025339.1| Influenza A virus (A/Colorado/UR06-0255/2007(H... 38.2 0.19
gb|CY025331.1| Influenza A virus (A/Illinois/UR06-0377/2007(H... 38.2 0.19
gb|CY025323.1| Influenza A virus (A/Mississippi/UR06-0242/200... 38.2 0.19
gb|CY025315.1| Influenza A virus (A/Kentucky/UR06-0082/2007(H... 38.2 0.19
gb|CY025307.1| Influenza A virus (A/Vermont/UR06-0050/2007(H1... 38.2 0.19
gb|CY025299.1| Influenza A virus (A/Texas/UR06-0380/2007(H1N1... 38.2 0.19
gb|CY025291.1| Influenza A virus (A/New York/UR06-0386/2007(H... 38.2 0.19
gb|CY025275.1| Influenza A virus (A/Texas/UR06-0502/2007(H1N1... 38.2 0.19
gb|CY025267.1| Influenza A virus (A/Kentucky/UR06-0059/2007(H... 38.2 0.19
gb|CY025251.1| Influenza A virus (A/Illinois/UR006-018/2007(H... 38.2 0.19
gb|CY025243.1| Influenza A virus (A/Illinois/UR06-0019/2007(H... 38.2 0.19
gb|CY025235.1| Influenza A virus (A/Kentucky/UR06-0010/2006(H... 38.2 0.19
gb|CY025227.1| Influenza A virus (A/Michigan/UR06-0015/2006(H... 38.2 0.19
gb|CY025219.1| Influenza A virus (A/Texas/UR06-0012/2006(H1N1... 38.2 0.19
gb|CY022635.1| Influenza A virus (A/turkey/Italy/1325/2005(H5... 38.2 0.19
gb|CY022587.1| Influenza A virus (A/Auckland/619/2005(H1N1)) ... 38.2 0.19
gb|CY021763.1| Influenza A virus (A/South Australia/51/2005(H... 38.2 0.19
gb|CY021531.1| Influenza A virus (A/turkey/Italy/1258/2005(H5... 38.2 0.19
gb|CY020715.1| Influenza A virus (A/turkey/Ivory Coast/4372-4... 38.2 0.19
gb|CY020707.1| Influenza A virus (A/turkey/Ivory Coast/4372-3... 38.2 0.19
gb|CY020699.1| Influenza A virus (A/turkey/Ivory Coast/4372-2... 38.2 0.19
gb|CY020163.1| Influenza A virus (A/Western Australia/77/2005... 38.2 0.19
gb|CY020003.1| Influenza A virus (A/Waikato/17/2005(H1N1)) se... 38.2 0.19
gb|CY019889.1| Influenza A virus (A/Memphis/5/2003(H1N1)) seg... 38.2 0.19
gb|CY019347.1| Influenza A virus (A/Memphis/6/2003(H1N1)) seg... 38.2 0.19
gb|EF063537.1| Influenza A virus (A/chicken/Dubai/463/2003(H9... 38.2 0.19
gb|CY018875.1| Influenza A virus (A/equine/Idaho/37875/1991(H... 38.2 0.19
gb|EF123933.1| Influenza A virus (A/duck/Guangxi/744/2006(H5N... 38.2 0.19
gb|CY017377.1| Influenza A virus (A/New York/8/2006(H1N1)) se... 38.2 0.19
gb|EF101753.1| Influenza A virus (A/Thailand/271/2005(H1N1)) ... 38.2 0.19
gb|CY017321.1| Influenza A virus (A/Waikato/4/2005(H1N1)) seg... 38.2 0.19
gb|DQ864506.1| Influenza A virus (A/mallard/Marquenterre/Z237... 38.2 0.19
gb|CY016705.1| Influenza A virus (A/South Australia/58/2005(H... 38.2 0.19
gb|CY016697.1| Influenza A virus (A/South Australia/57/2005(H... 38.2 0.19
gb|CY016689.1| Influenza A virus (A/South Australia/56/2005(H... 38.2 0.19
gb|CY016681.1| Influenza A virus (A/South Australia/55/2005(H... 38.2 0.19
gb|CY016465.1| Influenza A virus (A/Waikato/11/2005(H1N1)) se... 38.2 0.19
gb|CY015586.1| Influenza A virus (A/Wellington/14/2005(H1N1))... 38.2 0.19
gb|CY015087.1| Influenza A virus (A/chicken/Scotland/1959(H5N... 38.2 0.19
gb|CY014997.1| Influenza A virus (A/fowl/Dobson/1927(H7N7)) s... 38.2 0.19
gb|CY013603.1| Influenza A virus (A/Waikato/14/2005(H1N1)) se... 38.2 0.19
gb|CY014013.1| Influenza A virus (A/Wellington/11/2005(H1N1))... 38.2 0.19
gb|CY013595.1| Influenza A virus (A/Wellington/13/2005(H1N1))... 38.2 0.19
gb|CY013587.1| Influenza A virus (A/Waikato/13/2005(H1N1)) se... 38.2 0.19
gb|CY013579.1| Influenza A virus (A/Otago/5/2005(H1N1)) segme... 38.2 0.19
gb|CY013571.1| Influenza A virus (A/Wellington/12/2005(H1N1))... 38.2 0.19
gb|CY013563.1| Influenza A virus (A/Wellington/10/2005(H1N1))... 38.2 0.19
gb|DQ376869.1| Influenza A virus (A/chicken/Taiwan/A342/05(H6... 38.2 0.19
gb|DQ376868.1| Influenza A virus (A/chicken/Taiwan/0204/05(H6... 38.2 0.19
gb|DQ376865.1| Influenza A virus (A/chicken/Taiwan/ch1006/04(... 38.2 0.19
gb|DQ376864.1| Influenza A virus (A/chicken/Taiwan/0305/04(H6... 38.2 0.19
gb|DQ376853.1| Influenza A virus (A/chicken/Taiwan/PF3/02(H6N... 38.2 0.19
gb|CY011158.1| Influenza A virus (A/Wellington/1/2001(H1N1)) ... 38.2 0.19
gb|DQ493427.1| Influenza A virus (A/Vietnam/CL119/2005(H5N1))... 38.2 0.19
gb|DQ493425.1| Influenza A virus (A/Vietnam/CL105/2005(H5N1))... 38.2 0.19
gb|DQ493397.1| Influenza A virus (A/duck/Vietnam/286/2005(H5N... 38.2 0.19
gb|CY010402.1| Influenza A virus (A/Canterbury/01/2001(H1N1))... 38.2 0.19
gb|CY006201.1| Influenza A virus (A/New York/497/2003(H1N1)) ... 38.2 0.19
gb|DQ222919.1| Influenza A virus (A/equine/Wisconsin/1/03(H3N... 38.2 0.19
gb|CY003710.1| Influenza A virus (A/New York/496/2003(H1N1)) ... 38.2 0.19
gb|CY003478.1| Influenza A virus (A/New York/443/2001(H1N1)) ... 38.2 0.19
gb|CY003390.1| Influenza A virus (A/New York/293/2003(H1N1)) ... 38.2 0.19
gb|CY003382.1| Influenza A virus (A/New York/292/2003(H1N1)) ... 38.2 0.19
gb|AY651691.1| Influenza A virus (A/grey heron/HK/861.1/2002(... 38.2 0.19
gb|CY002990.1| Influenza A virus (A/New York/221/2003(H1N1)) ... 38.2 0.19
gb|CY002814.1| Influenza A virus (A/New York/399/2003(H1N1)) ... 38.2 0.19
gb|CY002710.1| Influenza A virus (A/New York/348/2003(H1N1)) ... 38.2 0.19
gb|CY002694.1| Influenza A virus (A/New York/223/2003(H1N1)) ... 38.2 0.19
gb|CY002686.1| Influenza A virus (A/New York/222/2003(H1N1)) ... 38.2 0.19
gb|CY002630.1| Influenza A virus (A/New York/230/2003(H1N1)) ... 38.2 0.19
gb|AY303733.1| Influenza A virus (A/Taiwan/2157/2001 (H1N1)) ... 38.2 0.19
gb|CY002534.1| Influenza A virus (A/New York/220/2002(H1N1)) ... 38.2 0.19
gb|CY009002.1| Influenza A virus (A/New York/484/2003(H1N1)) ... 38.2 0.19
gb|AF523440.1| Influenza A virus (A/Duck/Hong Kong/289/78(H9N... 38.2 0.19
gb|CY008530.1| Influenza A virus (A/New York/483/2003(H1N1)) ... 38.2 0.19
gb|CY008690.1| Influenza A virus (A/Memphis/105/72(H3N2)) seg... 38.2 0.19
gb|CY008466.1| Influenza A virus (A/Memphis/103/72(H3N2)) seg... 38.2 0.19
gb|CY005623.1| Influenza A virus (A/dk/Hong Kong/293/1978(H7N... 38.2 0.19
gb|DQ124176.1| Influenza A virus (A/equine/California/191/200... 38.2 0.19
gb|DQ124175.1| Influenza A virus (A/equine/Kentucky/5/2002(H3... 38.2 0.19
gb|DQ124174.1| Influenza A virus (A/equine/New York/1/1999(H3... 38.2 0.19
gb|DQ124173.1| Influenza A virus (A/equine/New York/452/2003(... 38.2 0.19
gb|DQ124172.1| Influenza A virus (A/equine/Ohio/1/2003(H3N8))... 38.2 0.19
gb|DQ124171.1| Influenza A virus (A/equine/Massachussetts/213... 38.2 0.19
gb|DQ124155.1| Influenza A virus (A/canine/Florida/242/2003(H... 38.2 0.19
gb|DQ124148.1| Influenza A virus (A/canine/Florida/43/2004(H3... 38.2 0.19
gb|CY007473.1| Influenza A virus (A/Canterbury/106/2004(H1N1)... 38.2 0.19
gb|CY006921.1| Influenza A virus (A/New York/488/2003(H1N1)) ... 38.2 0.19
gb|CY006681.1| Influenza A virus (A/New York/494/2002(H1N1)) ... 38.2 0.19
gb|CY006673.1| Influenza A virus (A/New York/493/2003(H1N1)) ... 38.2 0.19
gb|CY006433.1| Influenza A virus (A/New York/350/2003(H1N1)) ... 38.2 0.19
gb|CY003694.1| Influenza A virus (A/New York/486/2003(H1N1)) ... 38.2 0.19
gb|CY003310.1| Influenza A virus (A/New York/291/2002(H1N1)) ... 38.2 0.19
gb|CY003302.1| Influenza A virus (A/New York/228/2003(H1N1)) ... 38.2 0.19
gb|CY002542.1| Influenza A virus (A/New York/227/2003(H1N1)) ... 38.2 0.19
gb|AY855339.1| Influenza A virus (A/equine/Kentucky/5/02(H3N8... 38.2 0.19
gb|M25929.1|FLAPB1AF Influenza A virus (A/equine/Tennessee/5/... 38.2 0.19
Leave a comment:
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Re: July San Paolo Sequence Released
Originally posted by Dark Horse View PostDr. Niman,
Can you hazard a guess as to what these two polymorphisms mean in terms of transmissability and virulence, etc.?
Marilyn Bardsley
The presence of C1263T on all 11 PA's means that the new markers that match other isolates were acquired by recombination, which is also what was seen in the Sao Paulo sequence. It had three changes from three separate sources.
In the case of the Argentina PA, all 11 sequences have the same marker, which has not been seen in any other pandemic sequence. Therefore, it was the first acquired (any marker acquired before it would also be in all 11 isolates). Since it was first on board, all other markers, including those from other pandemic strains were appended onto an "Argentina" background (much like A743G was tacked onto H5N1 sequences, or H274Y was tacked onto various H1N1 seasonal flu backgrounds).
The dominance of this mechanism will likely drive H274Y, which may be lurking below detection already, and will aslo drive PB2 E627K.
Thus, the data confirms recombination as the mechanism for the acquisition of single nucleoitide polymorphisms, and the virus is getting ready to rock and roll. It can run through the human population at will and lately has been hopping back into swine.
Thus, this movement and recombination will lead to accellerating change, and the scenario will look increasingly like 1918.
Leave a comment:
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Re: July San Paolo Sequence Released
Dr. Niman,
Can you hazard a guess as to what these two polymorphisms mean in terms of transmissability and virulence, etc.?
Marilyn Bardsley
Leave a comment:
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Re: July San Paolo Sequence Released
The two polymorphisms C1263T and A1287G and everything in between are represented in the following travel log (and the isolate with both has been corrected to the name below) - swine sequences bolded
8019-Argentina-2009-S3-PA-2
gb|CY042601.1| Influenza A virus (A/ruddy turnstone/New Jerse... 50.1 1e-04
gb|CY042587.1| Influenza A virus (A/ruddy turnstone/New Jerse... 50.1 1e-04
gb|CY042578.1| Influenza A virus (A/ruddy turnstone/New Jerse... 50.1 1e-04
gb|CY042567.1| Influenza A virus (A/ruddy turnstone/New Jerse... 50.1 1e-04
gb|CY042563.1| Influenza A virus (A/ruddy turnstone/New Jerse... 50.1 1e-04
gb|CY042548.1| Influenza A virus (A/ruddy turnstone/Delaware/... 50.1 1e-04
gb|CY042538.1| Influenza A virus (A/ruddy turnstone/New Jerse... 50.1 1e-04
gb|CY042530.1| Influenza A virus (A/ruddy turnstone/New Jerse... 50.1 1e-04
gb|CY042526.1| Influenza A virus (A/ruddy turnstone/New Jerse... 50.1 1e-04
gb|CY042510.1| Influenza A virus (A/ruddy turnstone/New Jerse... 50.1 1e-04
gb|CY042491.1| Influenza A virus (A/ruddy turnstone/New Jerse... 50.1 1e-04
gb|CY042487.1| Influenza A virus (A/ruddy turnstone/New Jerse... 50.1 1e-04
gb|CY042484.1| Influenza A virus (A/ruddy turnstone/New Jerse... 50.1 1e-04
gb|CY042480.1| Influenza A virus (A/ruddy turnstone/New Jerse... 50.1 1e-04
gb|CY042472.1| Influenza A virus (A/ruddy turnstone/New Jerse... 50.1 1e-04
gb|CY042464.1| Influenza A virus (A/ruddy turnstone/New Jerse... 50.1 1e-04
gb|CY042461.1| Influenza A virus (A/ruddy turnstone/New Jerse... 50.1 1e-04
gb|CY042446.1| Influenza A virus (A/ruddy turnstone/New Jerse... 50.1 1e-04
gb|CY042436.1| Influenza A virus (A/ruddy turnstone/New Jerse... 50.1 1e-04
gb|CY042433.1| Influenza A virus (A/sanderling/New Jersey/Sg-... 50.1 1e-04
gb|CY042424.1| Influenza A virus (A/ruddy turnstone/New Jerse... 50.1 1e-04
gb|CY042418.1| Influenza A virus (A/ruddy turnstone/Delaware/... 50.1 1e-04
gb|CY042414.1| Influenza A virus (A/ruddy turnstone/Delaware/... 50.1 1e-04
gb|CY042409.1| Influenza A virus (A/ruddy turnstone/New Jerse... 50.1 1e-04
gb|CY042406.1| Influenza A virus (A/ruddy turnstone/Delaware/... 50.1 1e-04
gb|CY042166.1| Influenza A virus (A/blue-winged teal/Louisian... 50.1 1e-04
gb|CY042155.1| Influenza A virus (A/mallard/Minnesota/Sg-0018... 50.1 1e-04
gb|GQ257438.1| Influenza A virus (A/duck/New York/492652/2007... 50.1 1e-04
gb|GQ257452.1| Influenza A virus (A/mallard/Maryland/13/2003(... 50.1 1e-04
gb|FJ686719.1| Influenza A virus (A/mallard/Ohio/362/2003(H2N... 50.1 1e-04
gb|FJ686735.1| Influenza A virus (A/mallard/Ohio/365/2003(H2N... 50.1 1e-04
gb|FJ517299.1| Influenza A virus (A/mallard/Minnesota/354/199... 50.1 1e-04
dbj|AB434327.1| Influenza A virus (A/swine/Chachoengsao/NIAH5... 50.1 1e-04
dbj|AB434319.1| Influenza A virus (A/swine/Chonburi/NIAH589/2... 50.1 1e-04
gb|CY036631.1| Influenza A virus (A/duck/Massachusetts/Sg-004... 50.1 1e-04
gb|CY036552.1| Influenza A virus (A/unknown/New York/Sg-00420... 50.1 1e-04
gb|CY036545.1| Influenza A virus (A/unknown/New York/Sg-00418... 50.1 1e-04
gb|CY036509.1| Influenza A virus (A/unknown/New York/Sg-00409... 50.1 1e-04
gb|CY035351.1| Influenza A virus (A/mallard/Minnesota/Sg-0020... 50.1 1e-04
gb|CY035298.1| Influenza A virus (A/mallard/Minnesota/Sg-0017... 50.1 1e-04
gb|CY033768.2| Influenza A virus (A/mallard duck/Minnesota/Sg... 50.1 1e-04
gb|FJ357117.1| Influenza A virus (A/mallard/MD/26/2003(H1N1))... 50.1 1e-04
gb|FJ357125.1| Influenza A virus (A/mallard/MD/41/2003(H1N1))... 50.1 1e-04
gb|FJ357133.1| Influenza A virus (A/mallard/MD/42/2003(H1N1))... 50.1 1e-04
gb|FJ357141.1| Influenza A virus (A/mallard/MD/53/2003(H1N1))... 50.1 1e-04
gb|CY034644.1| Influenza A virus (A/blue-winged teal/Texas/Sg... 50.1 1e-04
gb|EU980506.1| Influenza A virus (A/mallard/MD/185/2003(H5N2)... 50.1 1e-04
gb|EU980513.1| Influenza A virus (A/mallard/MD/11/2003(H1N1))... 50.1 1e-04
gb|EU980521.1| Influenza A virus (A/mallard/MD/199/2003(H1N1)... 50.1 1e-04
gb|CY033767.1| Influenza A virus (A/mallard duck/Minnesota/Sg... 50.1 1e-04
gb|EU871897.1| Influenza A virus (A/mallard/MN/323/1999(H4N8)... 50.1 1e-04
gb|EU743533.1| Influenza A virus (A/mallard/MN/280/1999(H3N5)... 50.1 1e-04
gb|EU743132.1| Influenza A virus (A/duck/NY/191255-59/2002(H5... 50.1 1e-04
gb|EU743230.1| Influenza A virus (A/duck/NY/186875/2002(H5N2)... 50.1 1e-04
gb|EU084951.1| Influenza A virus (A/Duck/NY/185502/2002(H5N2)... 50.1 1e-04
gb|EU026087.1| Influenza A virus (A/mallard/MD/403/2002(H1N1)... 50.1 1e-04
gb|CY022610.1| Influenza A virus (A/green-winged teal/Ohio/12... 50.1 1e-04
gb|CY021658.1| Influenza A virus (A/black duck/Ohio/161/1999(... 50.1 1e-04
gb|CY021642.1| Influenza A virus (A/mallard/Delaware/418/2005... 50.1 1e-04
gb|CY021354.1| Influenza A virus (A/green-winged teal/Ohio/12... 50.1 1e-04
gb|CY021338.1| Influenza A virus (A/mallard/Maryland/1241/200... 50.1 1e-04
gb|CY021250.1| Influenza A virus (A/american black duck/Ohio/... 50.1 1e-04
gb|CY020922.1| Influenza A virus (A/environment/Ohio/1007/200... 50.1 1e-04
gb|CY020794.1| Influenza A virus (A/mallard/Ohio/668/2002(H4N... 50.1 1e-04
gb|CY015070.1| Influenza A virus (A/turkey/England/1963(H7N3)... 50.1 1e-04
gb|CY014676.1| Influenza A virus (A/chicken/Germany/n/1949(H1... 50.1 1e-04
gb|CY005820.1| Influenza A virus (A/duck/Czechoslovakia/1956(... 50.1 1e-04
gb|CY005229.1| Influenza A virus (A/mallard/ALB/5/1995(H10N1)... 50.1 1e-04
gb|CY004908.1| Influenza A virus (A/blue-winged teal/ALB/293/... 50.1 1e-04
gb|CY004448.1| Influenza A virus (A/shorebird/DE/68/2004(H13N... 50.1 1e-04
gb|CY004916.1| Influenza A virus (A/mallard/ALB/49/1995(H4N6)... 50.1 1e-04
gb|AF285890.1|AF285890 Influenza A virus (A/Swine/Ontario/019... 50.1 1e-04
gb|AY684885.1| Influenza A virus (A/black-headed gull/Sweden/... 50.1 1e-04
gb|AY684883.1| Influenza A virus (A/black-headed gull/Sweden/... 50.1 1e-04
Leave a comment:
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Re: July San Paolo Sequence Released
Another nail in the heart of "random mutations" comes from one of the Argentina isolates which has A1287G, just downstream from C1263T, which is in all 11 isolates from Argentina. The travel log for A1287G is below and has most of the avian and swine sequences with C1263T, Thus, these two tandom polymorphisms link back to the same source, signaling recombination (matching swine sequences bolded). No coincidences required.
A1287G
8019-Argentina-2009-S3-PA-2
gb|CY042601.1| Influenza A virus (A/ruddy turnstone/New Jerse... 42.8 5e-05
gb|CY042587.1| Influenza A virus (A/ruddy turnstone/New Jerse... 42.8 5e-05
gb|CY042578.1| Influenza A virus (A/ruddy turnstone/New Jerse... 42.8 5e-05
gb|CY042567.1| Influenza A virus (A/ruddy turnstone/New Jerse... 42.8 5e-05
gb|CY042563.1| Influenza A virus (A/ruddy turnstone/New Jerse... 42.8 5e-05
gb|CY042548.1| Influenza A virus (A/ruddy turnstone/Delaware/... 42.8 5e-05
gb|CY042538.1| Influenza A virus (A/ruddy turnstone/New Jerse... 42.8 5e-05
gb|CY042530.1| Influenza A virus (A/ruddy turnstone/New Jerse... 42.8 5e-05
gb|CY042526.1| Influenza A virus (A/ruddy turnstone/New Jerse... 42.8 5e-05
gb|CY042510.1| Influenza A virus (A/ruddy turnstone/New Jerse... 42.8 5e-05
gb|CY042491.1| Influenza A virus (A/ruddy turnstone/New Jerse... 42.8 5e-05
gb|CY042487.1| Influenza A virus (A/ruddy turnstone/New Jerse... 42.8 5e-05
gb|CY042484.1| Influenza A virus (A/ruddy turnstone/New Jerse... 42.8 5e-05
gb|CY042480.1| Influenza A virus (A/ruddy turnstone/New Jerse... 42.8 5e-05
gb|CY042472.1| Influenza A virus (A/ruddy turnstone/New Jerse... 42.8 5e-05
gb|CY042464.1| Influenza A virus (A/ruddy turnstone/New Jerse... 42.8 5e-05
gb|CY042461.1| Influenza A virus (A/ruddy turnstone/New Jerse... 42.8 5e-05
gb|CY042446.1| Influenza A virus (A/ruddy turnstone/New Jerse... 42.8 5e-05
gb|CY042436.1| Influenza A virus (A/ruddy turnstone/New Jerse... 42.8 5e-05
gb|CY042433.1| Influenza A virus (A/sanderling/New Jersey/Sg-... 42.8 5e-05
gb|CY042424.1| Influenza A virus (A/ruddy turnstone/New Jerse... 42.8 5e-05
gb|CY042418.1| Influenza A virus (A/ruddy turnstone/Delaware/... 42.8 5e-05
gb|CY042414.1| Influenza A virus (A/ruddy turnstone/Delaware/... 42.8 5e-05
gb|CY042409.1| Influenza A virus (A/ruddy turnstone/New Jerse... 42.8 5e-05
gb|CY042406.1| Influenza A virus (A/ruddy turnstone/Delaware/... 42.8 5e-05
gb|CY042166.1| Influenza A virus (A/blue-winged teal/Louisian... 42.8 5e-05
gb|CY042155.1| Influenza A virus (A/mallard/Minnesota/Sg-0018... 42.8 5e-05
gb|GQ257438.1| Influenza A virus (A/duck/New York/492652/2007... 42.8 5e-05
gb|GQ257452.1| Influenza A virus (A/mallard/Maryland/13/2003(... 42.8 5e-05
gb|CY037959.1| Influenza A virus (A/swine/Scotland/WVL17/1999... 42.8 5e-05
gb|FJ686719.1| Influenza A virus (A/mallard/Ohio/362/2003(H2N... 42.8 5e-05
gb|FJ686735.1| Influenza A virus (A/mallard/Ohio/365/2003(H2N... 42.8 5e-05
gb|FJ581430.1| Influenza A virus (A/chicken/Zhejiang/HJ/2007(... 42.8 5e-05
gb|FJ517299.1| Influenza A virus (A/mallard/Minnesota/354/199... 42.8 5e-05
dbj|AB434327.1| Influenza A virus (A/swine/Chachoengsao/NIAH5... 42.8 5e-05
dbj|AB434319.1| Influenza A virus (A/swine/Chonburi/NIAH589/2... 42.8 5e-05
gb|FJ492966.1| Influenza A virus (A/chicken/Zibo/B1/2008(H9N2... 42.8 5e-05
gb|CY036631.1| Influenza A virus (A/duck/Massachusetts/Sg-004... 42.8 5e-05
gb|CY036552.1| Influenza A virus (A/unknown/New York/Sg-00420... 42.8 5e-05
gb|CY036545.1| Influenza A virus (A/unknown/New York/Sg-00418... 42.8 5e-05
gb|CY036509.1| Influenza A virus (A/unknown/New York/Sg-00409... 42.8 5e-05
gb|EU557459.1| Influenza A virus (A/northern pintail/Alaska/4... 42.8 5e-05
gb|CY035351.1| Influenza A virus (A/mallard/Minnesota/Sg-0020... 42.8 5e-05
gb|CY035298.1| Influenza A virus (A/mallard/Minnesota/Sg-0017... 42.8 5e-05
gb|CY033768.2| Influenza A virus (A/mallard duck/Minnesota/Sg... 42.8 5e-05
gb|FJ357117.1| Influenza A virus (A/mallard/MD/26/2003(H1N1))... 42.8 5e-05
gb|FJ357125.1| Influenza A virus (A/mallard/MD/41/2003(H1N1))... 42.8 5e-05
gb|FJ357133.1| Influenza A virus (A/mallard/MD/42/2003(H1N1))... 42.8 5e-05
gb|FJ357141.1| Influenza A virus (A/mallard/MD/53/2003(H1N1))... 42.8 5e-05
gb|EU753273.1| Influenza A virus (A/chicken/Shanghai/2/1999(H... 42.8 5e-05
gb|EU753281.1| Influenza A virus (A/chicken/Shanghai/3/2000(H... 42.8 5e-05
gb|EU753289.1| Influenza A virus (A/chicken/Shanghai/1/2001(H... 42.8 5e-05
gb|EU753297.1| Influenza A virus (A/chicken/Shanghai/2/2001(H... 42.8 5e-05
gb|EU753305.1| Influenza A virus (A/chicken/Shanghai/7/2001(H... 42.8 5e-05
gb|EU753313.1| Influenza A virus (A/chicken/Shanghai/12/2001(... 42.8 5e-05
gb|EU753321.1| Influenza A virus (A/chicken/Shanghai/14/2001(... 42.8 5e-05
gb|EU753329.1| Influenza A virus (A/chicken/Shanghai/16/2001(... 42.8 5e-05
gb|EU753337.1| Influenza A virus (A/chicken/Shanghai/1/2002(H... 42.8 5e-05
gb|EU753345.1| Influenza A virus (A/chicken/Shanghai/2/2002(H... 42.8 5e-05
gb|CY034644.1| Influenza A virus (A/blue-winged teal/Texas/Sg... 42.8 5e-05
gb|EU532064.1| Influenza A virus (A/chicken/Jiangsu/L1/2004(H... 42.8 5e-05
gb|EU532062.1| Influenza A virus (A/chicken/Shandong/B2/2007(... 42.8 5e-05
gb|EU532059.1| Influenza A virus (A/chicken/Shandong/B4/2007(... 42.8 5e-05
gb|EU980506.1| Influenza A virus (A/mallard/MD/185/2003(H5N2)... 42.8 5e-05
gb|EU980513.1| Influenza A virus (A/mallard/MD/11/2003(H1N1))... 42.8 5e-05
gb|EU980521.1| Influenza A virus (A/mallard/MD/199/2003(H1N1)... 42.8 5e-05
gb|EU935067.1| Influenza A virus (A/chicken/Shandong/B3/2007(... 42.8 5e-05
gb|EU935066.1| Influenza A virus (A/chicken/Jiangsu/L2/2005(H... 42.8 5e-05
gb|CY033767.1| Influenza A virus (A/mallard duck/Minnesota/Sg... 42.8 5e-05
gb|EU871897.1| Influenza A virus (A/mallard/MN/323/1999(H4N8)... 42.8 5e-05
gb|EU743172.1| Influenza A virus (A/turkey/SD/7034/1986(H1N1)... 42.8 5e-05
gb|EU743311.1| Influenza A virus (A/blue winged teal/LA/B228/... 42.8 5e-05
gb|EU743573.1| Influenza A virus (A/mallard/MD/02-181/2002(H1... 42.8 5e-05
gb|EU743533.1| Influenza A virus (A/mallard/MN/280/1999(H3N5)... 42.8 5e-05
gb|EU743132.1| Influenza A virus (A/duck/NY/191255-59/2002(H5... 42.8 5e-05
gb|EU743230.1| Influenza A virus (A/duck/NY/186875/2002(H5N2)... 42.8 5e-05
gb|EU516311.1| Influenza A virus (A/swine/Shandong/w4/2003(H9... 42.8 5e-05
gb|EU182272.1| Influenza A virus (A/chicken/CA/S0403106/2004(... 42.8 5e-05
gb|EU182252.1| Influenza A virus (A/chicken/CA/431/2000(H6N2)... 42.8 5e-05
gb|EU182260.1| Influenza A virus (A/chicken/CA/6643/2001(H6N2... 42.8 5e-05
gb|EU086329.1| Influenza A virus (A/swine/Guangxi/S11/2005(H9... 42.8 5e-05
gb|EU086328.1| Influenza A virus (A/swine/Guangxi/S15/2005(H9... 42.8 5e-05
gb|EU086313.1| Influenza A virus (A/swine/Guangxi/FS2/2005(H9... 42.8 5e-05
gb|EU086312.1| Influenza A virus (A/bird/Guangxi/H1/2006(H9N2... 42.8 5e-05
gb|EU086294.1| Influenza A virus (A/quail/Guangxi/B1/2006(H9N... 42.8 5e-05
gb|EU086293.1| Influenza A virus (A/bird/Guangxi/83/2005(H9N2... 42.8 5e-05
gb|EU086278.1| Influenza A virus (A/bird/Guangxi/82/2005(H9N2... 42.8 5e-05
gb|EU086259.1| Influenza A virus (A/duck/Guangxi/51/2005(H9N2... 42.8 5e-05
gb|EU086257.1| Influenza A virus (A/bird/Guangxi/62/2005(H9N2... 42.8 5e-05
gb|EU086231.1| Influenza A virus (A/chicken/Guangxi/37/2005(H... 42.8 5e-05
gb|CY023839.1| Influenza A virus (A/chicken/Hunan/6108/2005(H... 42.8 5e-05
gb|CY023823.1| Influenza A virus (A/chicken/Hunan/5260/2005(H... 42.8 5e-05
gb|CY023815.1| Influenza A virus (A/chicken/Hunan/4444/2005(H... 42.8 5e-05
gb|CY023767.1| Influenza A virus (A/chicken/Hunan/774/2002(H9... 42.8 5e-05
gb|CY023751.1| Influenza A virus (A/chicken/Guangxi/2389/2005... 42.8 5e-05
gb|CY023727.1| Influenza A virus (A/chicken/Guangxi/521/2005(... 42.8 5e-05
gb|CY023719.1| Influenza A virus (A/chicken/Guangxi/187/2005(... 42.8 5e-05
gb|CY023703.1| Influenza A virus (A/chicken/Guangxi/2441/2004... 42.8 5e-05
gb|CY023695.1| Influenza A virus (A/chicken/Guangxi/1857/2004... 42.8 5e-05
gb|EU081869.1| Influenza A virus (A/chicken/Guangxi/4/1999(H9... 42.8 5e-05
gb|EU084951.1| Influenza A virus (A/Duck/NY/185502/2002(H5N2)... 42.8 5e-05
gb|CY024791.1| Influenza A virus (A/chicken/Victoria/1976(H7N... 42.8 5e-05
gb|EU026087.1| Influenza A virus (A/mallard/MD/403/2002(H1N1)... 42.8 5e-05
gb|EU026042.1| Influenza A virus (A/mallard/MD/170/2002(H1N1)... 42.8 5e-05
gb|EU026034.1| Influenza A virus (A/mallard/MD/168/2002(H1N1)... 42.8 5e-05
gb|CY022610.1| Influenza A virus (A/green-winged teal/Ohio/12... 42.8 5e-05
gb|EF612747.1| Influenza A virus (A/swine/Guangxi/58/2005(H9N... 42.8 5e-05
gb|CY021658.1| Influenza A virus (A/black duck/Ohio/161/1999(... 42.8 5e-05
gb|CY021642.1| Influenza A virus (A/mallard/Delaware/418/2005... 42.8 5e-05
gb|CY021354.1| Influenza A virus (A/green-winged teal/Ohio/12... 42.8 5e-05
gb|CY021338.1| Influenza A virus (A/mallard/Maryland/1241/200... 42.8 5e-05
gb|CY021250.1| Influenza A virus (A/american black duck/Ohio/... 42.8 5e-05
gb|CY021138.1| Influenza A virus (A/mallard/Ohio/399/1987(H11... 42.8 5e-05
gb|CY020922.1| Influenza A virus (A/environment/Ohio/1007/200... 42.8 5e-05
gb|CY020794.1| Influenza A virus (A/mallard/Ohio/668/2002(H4N... 42.8 5e-05
dbj|AB256737.1| Influenza A virus (A/chicken/Osaka/aq19/2001(... 42.8 5e-05
dbj|AB256721.1| Influenza A virus (A/chicken/Yokohama/aq135/2... 42.8 5e-05
dbj|AB256713.1| Influenza A virus (A/chicken/Yokohama/aq134/2... 42.8 5e-05
dbj|AB256697.1| Influenza A virus (A/chicken/Osaka/aq69/2001(... 42.8 5e-05
dbj|AB256681.1| Influenza A virus (A/chicken/Kobe/aq26/2001(H... 42.8 5e-05
dbj|AB256673.1| Influenza A virus (A/chicken/Yokohama/aq55/20... 42.8 5e-05
dbj|AB285093.1| Influenza A virus (A/duck/Siberia/272PF/1998(... 42.8 5e-05
dbj|AB284987.1| Influenza A virus (A/duck/Siberia/272/1998(H1... 42.8 5e-05
gb|DQ997424.1| Influenza A virus (A/swine/Shandong/na/2003(H9... 42.8 5e-05
gb|DQ997502.1| Influenza A virus (A/chicken/Beijing/nl/2002(H... 42.8 5e-05
dbj|AB274965.1| Influenza A virus (A/Duck/Hokkaido/8/80 (H3N8... 42.8 5e-05
gb|CY015070.1| Influenza A virus (A/turkey/England/1963(H7N3)... 42.8 5e-05
gb|CY014676.1| Influenza A virus (A/chicken/Germany/n/1949(H1... 42.8 5e-05
gb|CY014575.1| Influenza A virus (A/blue-winged teal/Alberta/... 42.8 5e-05
gb|AY664765.1| Influenza A virus (A/chicken/HongKong/TP38/03(... 42.8 5e-05
gb|AY664761.1| Influenza A virus (A/guineafowl/HongKong/NT101... 42.8 5e-05
gb|DQ064513.1| Influenza A virus (A/chicken/Shanghai/10/01(H9... 42.8 5e-05
gb|DQ064502.1| Influenza A virus (A/chicken/Heilongjiang/48/0... 42.8 5e-05
gb|DQ064496.1| Influenza A virus (A/chicken/Guangdong/56/01(H... 42.8 5e-05
gb|AF457716.1| Influenza A virus (A/chicken/California/1002a/... 42.8 5e-05
gb|AF457707.1| Influenza A virus (A/chicken/California/139/01... 42.8 5e-05
gb|AF457699.1| Influenza A virus (A/chicken/California/431/00... 42.8 5e-05
gb|AF457691.1| Influenza A virus (A/chicken/California/465/00... 42.8 5e-05
gb|AF457683.1| Influenza A virus (A/chicken/California/6643/0... 42.8 5e-05
gb|AF457674.1| Influenza A virus (A/chicken/California/905/01... 42.8 5e-05
gb|AY253752.1| Influenza A virus (A/Chicken/Shanghai/F/98(H9N... 42.8 5e-05
gb|CY005820.1| Influenza A virus (A/duck/Czechoslovakia/1956(... 42.8 5e-05
gb|CY005355.1| Influenza A virus (A/green-winged teal/ALB/199... 42.8 5e-05
gb|CY005229.1| Influenza A virus (A/mallard/ALB/5/1995(H10N1)... 42.8 5e-05
gb|CY004908.1| Influenza A virus (A/blue-winged teal/ALB/293/... 42.8 5e-05
gb|CY004654.1| Influenza A virus (A/mallard duck/ALB/635/1983... 42.8 5e-05
gb|CY004448.1| Influenza A virus (A/shorebird/DE/68/2004(H13N... 42.8 5e-05
gb|CY005418.1| Influenza A virus (A/semi-palmated sandpiper/B... 42.8 5e-05
gb|CY004916.1| Influenza A virus (A/mallard/ALB/49/1995(H4N6)... 42.8 5e-05
gb|CY003884.1| Influenza A virus (A/mallard duck/ALB/376/1985... 42.8 5e-05
gb|AF285890.1|AF285890 Influenza A virus (A/Swine/Ontario/019... 42.8 5e-05
gb|DQ226160.1| Influenza A virus (A/Gf/HK/NT101/2003(H9N2)) p... 42.8 5e-05
gb|DQ226157.1| Influenza A virus (A/Ck/HK/YU577/2003(H9N2)) p... 42.8 5e-05
gb|DQ226156.1| Influenza A virus (A/Ck/HK/YU463/2003(H9N2)) p... 42.8 5e-05
gb|AY684885.1| Influenza A virus (A/black-headed gull/Sweden/... 42.8 5e-05
gb|AY684884.1| Influenza A virus (A/black-headed gull/Sweden/... 42.8 5e-05
gb|AY684883.1| Influenza A virus (A/black-headed gull/Sweden/... 42.8 5e-05
gb|AY684882.1| Influenza A virus (A/black-headed gull/Netherl... 42.8 5e-05
gb|M26083.1|FLADH80PA Influenza A virus (A/duck/Hokkaido/8/19... 42.8 5e-05
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Re: July San Paolo Sequence Released
Originally posted by Rwilmer View PostHere is the sequence datebase, you may have to register:
http://cii.columbia.edu/H1N1sequencedata.html
gb|GQ365441.1| Influenza A virus (A/Kagoshima/1/2009(H1N1)) s... 42.8 5e-05
gb|GQ334343.1| Influenza A virus (A/Fukuoka-C/3/2009(H1N1)) s... 42.8 5e-05
gb|GQ334335.1| Influenza A virus (A/Fukuoka-C/2/2009(H1N1)) s... 42.8 5e-05
gb|GQ300858.1| Influenza A virus (A/Fukuoka-C/1/2009(H1N1)) s... 42.8 5e-05
declaring "random mutations" DOA.
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Re: July San Paolo Sequence Released
Originally posted by niman View Post
gb|CY042601.1| Influenza A virus (A/ruddy turnstone/New Jerse... 35.6 0.008
gb|CY042587.1| Influenza A virus (A/ruddy turnstone/New Jerse... 35.6 0.008
gb|CY042578.1| Influenza A virus (A/ruddy turnstone/New Jerse... 35.6 0.008
gb|CY042567.1| Influenza A virus (A/ruddy turnstone/New Jerse... 35.6 0.008
gb|CY042563.1| Influenza A virus (A/ruddy turnstone/New Jerse... 35.6 0.008
gb|CY042548.1| Influenza A virus (A/ruddy turnstone/Delaware/... 35.6 0.008
gb|CY042538.1| Influenza A virus (A/ruddy turnstone/New Jerse... 35.6 0.008
gb|CY042530.1| Influenza A virus (A/ruddy turnstone/New Jerse... 35.6 0.008
gb|CY042526.1| Influenza A virus (A/ruddy turnstone/New Jerse... 35.6 0.008
gb|CY042510.1| Influenza A virus (A/ruddy turnstone/New Jerse... 35.6 0.008
gb|CY042491.1| Influenza A virus (A/ruddy turnstone/New Jerse... 35.6 0.008
gb|CY042487.1| Influenza A virus (A/ruddy turnstone/New Jerse... 35.6 0.008
gb|CY042484.1| Influenza A virus (A/ruddy turnstone/New Jerse... 35.6 0.008
gb|CY042480.1| Influenza A virus (A/ruddy turnstone/New Jerse... 35.6 0.008
gb|CY042472.1| Influenza A virus (A/ruddy turnstone/New Jerse... 35.6 0.008
gb|CY042464.1| Influenza A virus (A/ruddy turnstone/New Jerse... 35.6 0.008
gb|CY042461.1| Influenza A virus (A/ruddy turnstone/New Jerse... 35.6 0.008
gb|CY042446.1| Influenza A virus (A/ruddy turnstone/New Jerse... 35.6 0.008
gb|CY042436.1| Influenza A virus (A/ruddy turnstone/New Jerse... 35.6 0.008
gb|CY042433.1| Influenza A virus (A/sanderling/New Jersey/Sg-... 35.6 0.008
gb|CY042424.1| Influenza A virus (A/ruddy turnstone/New Jerse... 35.6 0.008
gb|CY042418.1| Influenza A virus (A/ruddy turnstone/Delaware/... 35.6 0.008
gb|CY042414.1| Influenza A virus (A/ruddy turnstone/Delaware/... 35.6 0.008
gb|CY042409.1| Influenza A virus (A/ruddy turnstone/New Jerse... 35.6 0.008
gb|CY042406.1| Influenza A virus (A/ruddy turnstone/Delaware/... 35.6 0.008
gb|CY042166.1| Influenza A virus (A/blue-winged teal/Louisian... 35.6 0.008
gb|CY042155.1| Influenza A virus (A/mallard/Minnesota/Sg-0018... 35.6 0.008
gb|GQ257438.1| Influenza A virus (A/duck/New York/492652/2007... 35.6 0.008
gb|GQ257452.1| Influenza A virus (A/mallard/Maryland/13/2003(... 35.6 0.008
gb|FJ784805.1| Influenza A virus (A/chicken/Hubei/3002/2007(H... 35.6 0.008
gb|FJ784804.1| Influenza A virus (A/duck/Hubei/2911/2007(H5N1... 35.6 0.008
gb|FJ784797.1| Influenza A virus (A/duck/Henan/1650/2006(H5N1... 35.6 0.008
gb|FJ784793.1| Influenza A virus (A/duck/Hunan/689/2006(H5N1)... 35.6 0.008
gb|FJ686719.1| Influenza A virus (A/mallard/Ohio/362/2003(H2N... 35.6 0.008
gb|FJ686735.1| Influenza A virus (A/mallard/Ohio/365/2003(H2N... 35.6 0.008
gb|FJ517299.1| Influenza A virus (A/mallard/Minnesota/354/199... 35.6 0.008
dbj|AB434327.1| Influenza A virus (A/swine/Chachoengsao/NIAH5... 35.6 0.008
dbj|AB434319.1| Influenza A virus (A/swine/Chonburi/NIAH589/2... 35.6 0.008
gb|CY036631.1| Influenza A virus (A/duck/Massachusetts/Sg-004... 35.6 0.008
gb|CY036552.1| Influenza A virus (A/unknown/New York/Sg-00420... 35.6 0.008
gb|CY036545.1| Influenza A virus (A/unknown/New York/Sg-00418... 35.6 0.008
gb|CY036509.1| Influenza A virus (A/unknown/New York/Sg-00409... 35.6 0.008
gb|CY036060.1| Influenza A virus (A/crested goshawk/Hong Kong... 35.6 0.008
gb|CY036052.1| Influenza A virus (A/scaly-breasted munia/Hong... 35.6 0.008
gb|CY035351.1| Influenza A virus (A/mallard/Minnesota/Sg-0020... 35.6 0.008
gb|CY035298.1| Influenza A virus (A/mallard/Minnesota/Sg-0017... 35.6 0.008
gb|CY033768.2| Influenza A virus (A/mallard duck/Minnesota/Sg... 35.6 0.008
gb|FJ357117.1| Influenza A virus (A/mallard/MD/26/2003(H1N1))... 35.6 0.008
gb|FJ357125.1| Influenza A virus (A/mallard/MD/41/2003(H1N1))... 35.6 0.008
gb|FJ357133.1| Influenza A virus (A/mallard/MD/42/2003(H1N1))... 35.6 0.008
gb|FJ357141.1| Influenza A virus (A/mallard/MD/53/2003(H1N1))... 35.6 0.008
gb|CY034644.1| Influenza A virus (A/blue-winged teal/Texas/Sg... 35.6 0.008
gb|EU980506.1| Influenza A virus (A/mallard/MD/185/2003(H5N2)... 35.6 0.008
gb|EU980513.1| Influenza A virus (A/mallard/MD/11/2003(H1N1))... 35.6 0.008
gb|EU980521.1| Influenza A virus (A/mallard/MD/199/2003(H1N1)... 35.6 0.008
gb|CY033767.1| Influenza A virus (A/mallard duck/Minnesota/Sg... 35.6 0.008
gb|EU871897.1| Influenza A virus (A/mallard/MN/323/1999(H4N8)... 35.6 0.008
gb|EU743200.1| Influenza A virus (A/chicken/NY/11602-12/1998(... 35.6 0.008
gb|EU743462.1| Influenza A virus (A/mallard/MN/42/2000(H11N9)... 35.6 0.008
gb|EU743533.1| Influenza A virus (A/mallard/MN/280/1999(H3N5)... 35.6 0.008
gb|EU743132.1| Influenza A virus (A/duck/NY/191255-59/2002(H5... 35.6 0.008
gb|EU743230.1| Influenza A virus (A/duck/NY/186875/2002(H5N2)... 35.6 0.008
gb|EU182317.1| Influenza A virus (A/chicken/NY/14677-13/1998(... 35.6 0.008
gb|EU084951.1| Influenza A virus (A/Duck/NY/185502/2002(H5N2)... 35.6 0.008
gb|EU026087.1| Influenza A virus (A/mallard/MD/403/2002(H1N1)... 35.6 0.008
gb|CY022610.1| Influenza A virus (A/green-winged teal/Ohio/12... 35.6 0.008
gb|CY021658.1| Influenza A virus (A/black duck/Ohio/161/1999(... 35.6 0.008
gb|CY021642.1| Influenza A virus (A/mallard/Delaware/418/2005... 35.6 0.008
gb|CY021354.1| Influenza A virus (A/green-winged teal/Ohio/12... 35.6 0.008
gb|CY021338.1| Influenza A virus (A/mallard/Maryland/1241/200... 35.6 0.008
gb|CY021250.1| Influenza A virus (A/american black duck/Ohio/... 35.6 0.008
gb|CY020922.1| Influenza A virus (A/environment/Ohio/1007/200... 35.6 0.008
gb|CY020794.1| Influenza A virus (A/mallard/Ohio/668/2002(H4N... 35.6 0.008
gb|DQ997128.1| Influenza A virus (A/chicken/Hubei/wk/1997(H5N... 35.6 0.008
gb|CY015070.1| Influenza A virus (A/turkey/England/1963(H7N3)... 35.6 0.008
gb|CY015057.1| Influenza A virus (A/chicken/Brescia/1902(H7N7... 35.6 0.008
gb|CY015051.1| Influenza A virus (A/fowl/Rostock/45/1934(H7N1... 35.6 0.008
gb|CY014996.1| Influenza A virus (A/fowl/Dobson/1927(H7N7)) s... 35.6 0.008
gb|CY014893.1| Influenza A virus (A/duck/New York/16873/1999(... 35.6 0.008
gb|CY014885.1| Influenza A virus (A/chicken/New York/14677-13... 35.6 0.008
gb|CY014676.1| Influenza A virus (A/chicken/Germany/n/1949(H1... 35.6 0.008
gb|CY005820.1| Influenza A virus (A/duck/Czechoslovakia/1956(... 35.6 0.008
gb|CY005229.1| Influenza A virus (A/mallard/ALB/5/1995(H10N1)... 35.6 0.008
gb|CY004908.1| Influenza A virus (A/blue-winged teal/ALB/293/... 35.6 0.008
gb|CY004448.1| Influenza A virus (A/shorebird/DE/68/2004(H13N... 35.6 0.008
gb|CY004916.1| Influenza A virus (A/mallard/ALB/49/1995(H4N6)... 35.6 0.008
gb|AF285890.1|AF285890 Influenza A virus (A/Swine/Ontario/019... 35.6 0.008
emb|X17223.1| Influenza A virus (A/FPV/Rostock/34(H7N1)) gene... 35.6 0.008
gb|AY684885.1| Influenza A virus (A/black-headed gull/Sweden/... 35.6 0.008
gb|AY684883.1| Influenza A virus (A/black-headed gull/Sweden/... 35.6 0.008
emb|AJ243992.1| Influenza A virus (STRAIN A/FOWL PLAGUE VIRUS... 35.6 0.008
gb|M21850.1|FLAPACR Influenza A virus (A/chicken/FPV/Rostock/... 35.6 0.008
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