gsgs
Registered User
mutation table experiments
Code:
0000000000000000000000000000000000000000000000000000000000000000000000000000000000011111111111111111111111111111111111111111111111111
0000000111111111112223333333344444444444455555555666666666666677777788888889999999900000011111111122222223333334444444555555555666666
2334799014466778993672334578923445567788913344466000234455568813556911456890133567801225801247788901455890022330014578113366679236689
5072839240135289145931030290942463962736561403905178190647834775342906726810534568182376049501925162817163569353860838280603674905831
-codon-position-------------------------------1 1 2 1 11 2212 1112 1 2 11 21112 11 1 1 1 1 2 11 1 1 1 1 1 21 21 1 2
---Index--------------------------------------CTGCGCACATTACCAGTCCCCTATGCTCAACTTATGGACCAAGCACTGGAGCTTGGGGTAGGTCAGAGTCATTTGGCTAAACAGGTTTGTGGCGTCATGTCGAACATGGCAGCCCCGCACAAAGGGGGGCTGT
1 >A/******/index/2009/02/01 .....................................................................................................................................
2 >A/CA/VRDL64,2009/08/10 ..........................................................A..................................A..................T....................
3 >A/CA/VRDL67,2009/08/18 ..........................................................A..................................A..................T....................
4 >A/Singapore/GP3084,2009/08/18 ..........................................................A..................................A..................T....................
5 >A/CA/VRDL70,2009/08/27 ..........................................................A..................................A..................T....................
6 >A/CA/VRDL72,2009/09/01 ..........................................................A..................................A..................T....................
7 >A/Singapore/GP3491,2009/09/01 ..........................................................A..................................A..................T....................
8 >A/Singapore/ON2018,2009/09/04 ..........................................................A..................................A..................T....................
9 >A/Texas/45062584,2009/09/06 ..........................................................A..................................A..................T....................
10 >A/Wisconsin/629-D02133,2009/09/09 ..........................................................A..................................A..................T....................
11 >A/Singapore/ON2063,2009/09/10 ..........................................................A..................................A..................T....................
12 >A/CA/VRDL78,2009/09/22 ..........................................................A..................................A..................T....................
13 >A/CA/VRDL80,2009/10/01 ..........................................................A..................................A..................T....................
14 >A/Wisconsin/629-D00834,2009/10/05 ..........................................................A..................................A..................T....................
15 >A/Singapore/ON2193,2009/10/08 ..........................................................A..................................A..................T....................
16 >A/Norway/3797,2009/10/12 ..........................................................A..................................A..................T....................
17 >A/San Diego/INS52,2009/10/12 ..........................................................A..................................A..................T....................
18 >A/Catalonia/S1515,2009/10/13 --------..................................................A..................................A..................T................----
19 >A/San Diego/INS102,2009/10/14 ..........................................................A..................................A..................T....................
20 >A/NY/5161,2009/10/16 ..........................................................A..................................A..................T....................
21 >A/Texas/46182018,2009/10/18 ..........................................................A..................................A..................T....................
22 >A/Catalonia/S1554,2009/10/20 --------..................................................A..................................A..................T.................---
23 >A/San Diego/INS16,2009/10/20 ..........................................................A..................................A..................T....................
24 >A/San Diego/INS61,2009/10/21 ..........................................................A..................................A..................T....................
25 >A/Texas/46221665,2009/10/22 ..........................................................A..................................A..................T....................
26 >A/Catalonia/S1668,2009/11/02 --------..................................................A..................................A..................T.................---
27 >A/Catalonia/S1686,2009/11/03 --------..................................................A..................................A..................T................----
28 >A/NY/5916,2009/11/06 ..........................................................A..................................A..................T....................
29 >A/Catalonia/S1744,2009/11/09 --------..................................................A..................................A..................T..................--
30 >A/San Diego/INS74,2009/11/12 ..........................................................A..................................A..................T....................
31 >A/NY/6293,2009/11/16 ..........................................................A..................................A..................T....................
32 >A/Catalonia/S1938,2009/11/23 --------..................................................A..................................A..................T.................---
33 >A/NY/6772,2009/12/07 ..........................................................A..................................A..................T....................
34 >A/NY/6806,2009/12/07 ..........................................................A..................................A..................T....................
35 >A/Catalonia/NS092145714,2009/12/10 --------..................................................A..................................A..................T..................--
36 >A/Catalonia/S2118,2009/12/14 --------..................................................A..................................A..................T................----
37 >A/CA/VRDL61,2009/07/27 ..........................................................A..................................A.........G........T....................
38 >A/Managua/2093.01,2009/08/18 ..........................................................A..................................A............C.....T....................
39 >A/Managua/3244.01,2009/08/18 ..........................................................A..................................A............C.....T....................
40 >A/Managua/4218.01,2009/08/17 ..........................................................A..................................A............C.....T....................
41 >A/CA/VRDL96,2009/10/29 ..........................................................A..................................A............C.....T..........A.........
42 >A/ShandongTaishan/1616,2009/12/07 -------------------------.................................A..................................A......---------------------------------
43 >A/Singapore/ON1868,2009/08/22 .........................................................AA..................................A..................T....................
44 >A/Texas/45093846,2009/09/09 ..........................................................A..................................A.....C............T....................
45 >A/Singapore/ON2090,2009/09/14 ..........................................................A..................................A.............A....T....................
46 >A/Singapore/ON2083,2009/09/13 ..........................................................A..................................A.............A....T....................
47 >A/Murmansk/CRIE-PAI,2009/09/17 ..........................................................A..................................A..................T.................C..
48 >A/Murmansk/CRIE-DII,2009/09/21 ..........................................................A..................................A..................T.................C..
49 >A/Murmansk/CRIE-JAS,2009/09/21 ..........................................................A..................................A..................T.................C..
50 >A/Murmansk/CRIE-LKA,2009/09/21 ..........................................................A..................................A..................T.................C..
51 >A/Malaysia/9254,2009/08/11 ..........................................................A..................................A..................T.................C..
52 >A/Catalonia/S1650,2009/10/28 ---------.................................................A..................................A..................T................----
53 >A/Catalonia/S2144,2009/12/21 ---------.................................................A..................................A..................T.................---
54 >A/Taiwan/156,2009/09/18 ..........................................................A..................................A....A.............T....................
55 >A/Taiwan/167,2009/09/18 ..........................................................A..................................A....A.............T....................
56 >A/Taiwan/177,2009/09/18 ..........................................................A..................................A....A.............T....................
57 >A/Taiwan/206,2009/09/18 ..........................................................A..................................A....A.............T....................
58 >A/Taiwan/143,2009/09/15 ..........................................................A..................................A....A.............T....................
59 >A/CA/VRDL76,2009/09/21 ..........................................................A...............A..................A....A.............T....................
60 >A/Wisconsin/629-D01749,2009/10/09 ..........................................................A..................................A..................T...........A........
61 >A/Wisconsin/629-S1431,2009/10/27 ..........................................................A..................................A..................T...........A........
62 >A/Wisconsin/629-D00859,2009/11/19 ..........................................................A..................................A..................T...........A........
63 >A/Wisconsin/629-D01015,2009/09/29 ..........................................................A..................................A......T...........T...........A........
64 >A/Wisconsin/629-D00692,2009/10/15 ..........................................................A..................................A......T...........T...........A........
65 >A/Wisconsin/629-D02090,2009/10/09 ........................................G.................A..................................A..................T...........A........
66 >A/Wisconsin/629-D00830,2009/10/12 ........................................G.................A..................................A..................T...........A........
67 >A/Wisconsin/629-S1417,2009/10/26 ........................................G.................A..................................A..................T...........A........
68 >A/Wisconsin/629-D01570,2009/11/05 ........................................G.................A..................................A..................T...........A........
69 >A/Wisconsin/629-D00557,2009/10/10 ........................................G.................A..................................A..................T...........A........
70 >A/Wisconsin/629-D01904,2009/12/14 ........................................G.................A..................................A..................T...........A........
71 >A/Wisconsin/629-D01038,2009/12/16 ........................................G.................A..................................A..................T...........A........
72 >A/Wisconsin/629-S1348,2009/10/14 ..........................................................A..................................A..................T......T....A........
73 >A/Wisconsin/629-S1350,2009/10/14 ..........................................................A..................................A..................T......T....A........
74 >A/Wisconsin/629-D00911,2009/11/15 ....A.....................................................A..................................A..................T...........A........
75 >A/Madrid/RC10,2009/10/10 ---------G................................................A..................................A..................T--------------------
76 >A/Texas/45071524,2009/09/07 ..........................................................A..............C...................A..................T...........A........
77 >A/Texas/45103998,2009/09/10 ..........................................................A..............C...................A..................T...........A........
78 >A/CA/VRDL91,2009/10/17 ..........................................................A............................C.....A..................T....................
79 >A/NY/5173,2009/10/17 .........................T................................A..................................A..................T....................
80 >A/NY/5620,2009/11/02 .........................T.....................A..........A..................................A..................T....................
81 >A/Boston/154,2009/08/18 ...................A...........................A..........A..................................A..................T....................
82 >A/San Diego/INS104,2009/10/20 ..........................................................A..................................A..................T....................
83 >A/San Diego/INS34,2009/10/21 ..........................................................A..................................A..................T....................
84 >A/Singapore/ON2241,2009/10/21 ..........................................................A..................................A..................T....................
85 >A/Wash.DC/INS27,2009/10/21 ..........................................................A................A.................A..................T....................
86 >A/NY/5271,2009/10/22 ..................................................A.......A..................................A..................T....................
87 >A/Texas/46222134,2009/10/22 ..................................................A.......A..................................A..................T....................
88 >A/San Diego/INS03,2009/10/12 ..................................................A.......A.............C....................A..................T....................
89 >A/CA/VRDL97,2009/10/29 ..................................................A.......A.............................A....A..................T....................
90 >A/Ontario/328474,2009/11/17 .........................................G........A.......A..................................A..................T....................
91 >A/Texas/46193311,2009/10/19 ..................................................A.......A..................................A..................T....................
92 >A/Texas/46241654,2009/10/24 ..........................................................A..................................A..................T....................
93 >A/San Diego/INS65,2009/10/28 ..........................................................A..................................A..................T....................
94 >A/San Diego/INS42,2009/11/04 ............T.............................................A..................................A..................T....................
95 >A/San Diego/INS48,2009/11/04 ..........................................................A..................................A..................T....................
96 >A/Texas/JMS358,2009/11/04 ..........................................................A..A...............................A..................T....................
97 >A/Singapore/GP4247,2009/11/06 ......G...................................................A..................................A..................T....................
98 >A/Singapore/ON2271,2009/11/03 ......G...................................................A..................................A.......................................
99 >A/Guangdong/1266,2009/11/22 ..........................................................A...............................A..A.......................................
100 >A/Guangdong/1275,2009/11/20 ..........................................................A...............................A..A...........G......T....................
101 >A/Guangdong/1270,2009/11/21 ..........................................................A...............................A..A...........G......T....................
102 >A/Guangdong/1260,2009/11/20 ..........................................................A...............................A..A...........G......T....................
103 >A/San Diego/INS69,2009/11/05 ..........................................................A.............C.................A..A..................T....................
104 >A/Wisconsin/629-D00337,2009/12/15 ..........................................................A.............C....................A..................T....................
105 >A/Wisconsin/629-D01014,2009/11/08 ..........................................................A..................................A..................T............A.......
106 >A/NY/6072,2009/11/09 ..............................................A...........A..................................A..................T....................
107 >A/NY/6300,2009/11/17 ..............................................A...........A..................................A..................T....................
108 >A/NY/5667,2009/10/13 ..............................................A...........A..................................A..................T....................
109 >A/Singapore/GP4326,2009/11/13 ........................A.................................A..................................A..................T....................
110 >A/Singapore/GP4581,2009/12/02 ........................A.................................A..................................A..................T....................
111 >A/Wisconsin/629-S1384,2009/10/19 ........................A.................................A............C.....................A..................T....................
112 >A/NY/5199,2009/10/20 ........................A.................................A............C.....................A..................T....................
113 >A/Wisconsin/629-D00151,2009/11/05 ........................A.................................A............C.....................A..................T....................
114 >A/Wisconsin/629-D01466,2009/11/08 ........................A.................................A............C.....................A..................T....................
115 >A/Wisconsin/629-D02392,2009/11/08 ........................A.................................A............C.....................A..................T....................
116 >A/Wisconsin/629-D02448,2009/11/23 ........................A.................................A............C.....................A..................T....................
117 >A/NY/0357,2009/12/30 ........................A.................................A............C.....................A..................T....................
118 >A/NY/1680,2010/01/12 ........................A.................................A............C.....................A..................T....................
119 >A/NY/2175,2010/01/19 ........................A.................................A............C.....................A..................T....................
120 >A/NY/2598,2010/01/20 ........................A.................................A............C.....................A..................T....................
121 >A/NY/2971,2010/01/23 ........................A.................................A............C.....................A..................T....................
122 >A/NY/3236,2010/01/26 ........................A.................................A............C.....................A..................T....................
123 >A/Ankara/22,2009/08/ ........................A.................................A............C...T.................A..................T....................
124 >A/Ankara/20,2009/10/ ........................A.................................A............C...T.................A..................T....................
125 >A/Ankara/21,2009/10/ ........................A.................................A............C...T.................A..................T....................
126 >A/Wisconsin/629-D01752,2009/12/15 ........................A.................................A............C...T.................A..................T....................
127 >A/Madrid/INS184,2009/12/15 ........................A.................................A............C...T.................A..................T....................
128 >A/Wisconsin/629-D01351,2009/10/01 ........................A.................................A............C.....................A..................T....................
129 >A/NY/4985,2009/10/05 ........................A.................................A......A.....C.....................A..................T....................
130 >A/NY/4984,2009/10/06 ........................A.................................A......A.....C.....................A..................T....................
131 >A/Wisconsin/629-S1388,2009/10/19 ........................A.................................A............C.....................A..................T....................
132 >A/NY/5221,2009/10/20 ........................A........T........................A............C.....................A..................T....................
133 >A/Wash.DC/INS33,2009/10/26 ........................A........T........................A............C.....................A..................T....................
134 >A/Wash.DC/INS19,2009/10/27 ........................A........T........................A............C.....................A..................T....................
135 >A/Wash.DC/INS45,2009/11/03 ........................A........T........................A............C.....................A..................T....................
136 >A/NY/5886,2009/11/09 ........................A........T........................A............C.....................A..................T....................
137 >A/NY/6019,2009/11/09 ........................A........T........................A............C.....................A..................T....................
138 >A/NY/6213,2009/11/16 ........................A........T........................A............C.....................A..................T....................
139 >A/NY/6771,2009/12/07 ........................A........T........................A............C.....................A..................T....................
140 >A/NY/6907,2009/12/08 ........................A........T........................A............C.....................A..................T....................
141 >A/NY/6977,2009/12/11 ........................A........T........................A............C.....................A..................T....................
142 >A/Texas/JMS415,2010/02/06 ........................A........T........................A............C.....................A..................T....................
143 >A/Wash.DC/INS25,2009/10/26 ............T...........A........T........................A............C.....................A..................T....................
144 >A/NY/5782,2009/11/03 ........................A........T........................A............C.....................A..................T....................
145 >A/Wash.DC/INS44,2009/11/03 ........................A........T........................A............C.....................A..................T....................
146 >A/NY/6182,2009/11/16 ........................A........T........................A............C.....................A.................AT....................
147 >A/NY/6868,2009/11/23 ......................T.A........T........................A............C.....................A..................T....................
148 >A/NY/5130,2009/10/13 ......................T.A........T........................A............C.....................A..................T....................
149 >A/NY/6571,2009/11/26 ........................A........T........................A............C.....................A..................TT...................
150 >A/NY/5976,2009/11/09 ................A.......A........T........................A............C.....................A..................TT...................
151 >A/Wisconsin/629-S1397,2009/10/21 ................A.......A.................................A............C....A................A..................T....................
152 >A/Wisconsin/629-D00935,2009/12/02 ................A.......A.................................A............C....A................A..................T....................
153 >A/Wisconsin/629-D02299,2009/12/02 ................A.......A.................................A............C....A................A..................T....................
154 >A/Wisconsin/629-S1398,2009/10/21 ................A.......A.................................A............C....A................A..................T....................
155 >A/Wisconsin/629-D01591,2009/12/07 ................A.......A..........T......................A............C....A................A..................T....................
156 >A/Wisconsin/629-D00147,2009/12/09 ................A.......A..........T......................A............C....A................A..................T....................
157 >A/NY/2963,2010/01/22 ................A.......A.................................A............C....A................A..................T....................
158 >A/NY/5276,2009/10/21 ........................A.............................T...A............C.....................A..................T....................
159 >A/Wisconsin/629-D00780,2009/12/08 ........................A.............................T...A............C.....................A..................T....................
160 >A/Wisconsin/629-D02018,2009/10/23 ........................A.................................A............C.....................A..................T....................
161 >A/Wash.DC/INS29,2009/10/26 ........................A.................................A............C.....................A..................T....................
162 >A/Pensacola/INS108,2009/11/17 ........................A.................................A............C.....................A.......A..........T....................
163 >A/Pensacola/INS109,2009/11/17 ........................A.................................A............C.....................A.......A..........T....................
164 >A/Pensacola/INS37,2009/11/04 ........................A.................................A............C.....................A.......A..........T....................
165 >A/Pensacola/INS38,2009/11/04 ........................A.................................A............C.....................A.......A..........T....................
166 >A/NY/6546,2009/11/23 .......T................A.................................A............C.....................A..................T....................
167 >A/NY/6214,2009/11/16 ..A....T................A.................................A............C.....................A..................T....................
168 >A/NY/6810,2009/11/25 ..A....T................A.................................A............C.....C...............A..................T....................
169 >A/NY/6808,2009/11/29 .......T................A.........C.......................A............C.....................A..................T....................
170 >A/Texas/JMS388,2009/12/11 ........................A.................................A............C.....................A..................T....................
171 >A/Terrassa/INS175,2009/12/23 ........................A.................................A............C.....................A..................T....................
172 >A/NY/6110,2009/11/08 ........................A.................................A............C................A....A..................T....................
173 >A/Singapore/ON2286,2009/11/10 ........................A.................................A..................................A..................T....................
174 >A/Singapore/ON2308,2009/11/16 ........................A.................................A..................................A..................T....................
175 >A/NY/6346,2009/11/18 ..........................................................A..................................A..................T....................
176 >A/Bonn/INS128,2009/11/20 ..........................................................A..................................A..................T....................
177 >A/Guangdong/1262,2009/11/22 ..........................................................A..................................A..................T.........G..........
178 >A/Ghana/N12981,2009/10/ .............T............................................A..................................A..................T.........G..........
179 >A/NY/6473,2009/11/22 ..........................................................A..................................A..................T....................
180 >A/Texas/JMS377,2009/11/26 ..........................................................A.........................A........A..................T....................
181 >A/Texas/JMS384,2009/11/30 ..........................................................A.........................A........A..................T....................
182 >A/Texas/JMS375,2009/11/23 ..........................................................A.........................A....C...A..................T....................
183 >A/Sw/Italy/290271,2009/11/27 ..........................................................A.......................G.A........A..................T....................
184 >A/Athens/INS163,2009/12/20 ..........................................................A.......................G..........A..................T....................
185 >A/NY/INS151,2009/12/11 ..........................................................A.......................G..........A..................T....................
186 >A/Guangdong/1738,2009/11/27 ..........................................................A..................................A..................T....................
187 >A/NY/7036,2009/12/16 ..........................................................A..................................A..................T........G...........
188 >A/Texas/JMS392,2009/12/25 ..........................................................A..................................A..................T....................
189 >A/NY/0352,2009/12/27 ..........................................................A..................................A..................T....................
190 >A/NY/2648,2010/01/22 ..........................................................A..................................A..................T....................
191 >A/NY/3251,2010/01/26 ..........................................................A..................................A..........T.......T....................
192 >A/NY/3250,2010/01/27 ..........................................................A..................................A..........T.......T....................
193 >A/Singapore/ON0801,2009/07/01 ..........................................................A..................................A..................T....................
194 >A/NY/4565,2009/07/08 .............................................................................................A..................T....................
195 >A/CA/VRDL85,2009/10/09 .....................................G.T..................A..................................A..................T....................
196 >A/San Diego/INS02,2009/10/12 .....................................G.T..................A..................................A..................T....................
197 >A/San Diego/INS05,2009/10/12 .....................................G.T..................A..................................A..................T....................
198 >A/San Diego/INS06,2009/10/12 .....................................G.T..................A..................................A..................T....................
199 >A/San Diego/INS53,2009/10/12 .....................................G.T..................A..................................A..................T....................
200 >A/San Diego/INS08,2009/10/13 .....................................G.T..................A..................................A..................T....................
201 >A/San Diego/INS10,2009/10/13 .....................................G.T..................A..................................A..................T....................
202 >A/San Diego/INS60,2009/10/19 .....................................G.T..................A..................................A..................T....................
203 >A/San Diego/INS04,2009/10/12 .....................................G.T..................A..................................A..................T....................
204 >A/San Diego/INS51,2009/10/12 ...T.................................G.T..................A..................................A..................T....................
205 >A/San Diego/INS09,2009/10/13 ...T.................................G.T..................A..................................A..................T....................
206 >A/San Diego/INS55,2009/10/14 .....................................G.T..................A..................................A..................T....................
207 >A/San Diego/INS57,2009/10/15 .....................................G.T..................A..................................A..................T....................
208 >A/San Diego/INS103,2009/10/19 .....................................G.T..................A..................................A..................T....................
209 >A/Wisconsin/629-S1425,2009/10/27 .....................................G....................A..................................A..................T..............A.....
210 >A/San Diego/INS11,2009/10/14 ..........................................................A..................................A..............A...T....................
211 >A/Wash.DC/INS24,2009/10/15 ..........................................................A.......G..........................A..................T....................
212 >A/Wash.DC/INS18,2009/10/28 ..........................................................A..................................A..................T....................
213 >A/Wisconsin/629-D00938,2009/11/02 .....A....................................................A..................................AC.................T....................
214 >A/Beijing/22808,2009/12/ ..........................................................A..................................AC.................T....................
215 >A/Singapore/ON2269,2009/11/03 ..........................................................A..................................A..................T....................
216 >A/Wash.DC/INS46,2009/11/03 ..........................................................A..................................A..................T.T.............A....
217 >A/NY/6909,2009/11/29 ..........................................................A..................................A..................T.T.............A....
218 >A/NY/6864,2009/12/02 ..........................................................A..................................A..................T.T.............A....
219 >A/NY/4995,2009/10/04 ............Y.............................................A..................................A..................T.T.............A....
220 >A/NY/6675,2009/11/24 ..........................................................A..................................A..................T.T.............A....
221 >A/Aalborg/INS133,2009/12/02 ..........................................................A..................................A..................T..T............A....
222 >A/Singapore/GP4556,2009/12/01 ..........................................................A..................................A..................T..T.................
223 >A/Guangdong/1078,2009/11/17 ..........................................................A..................................A..................T.............A..T...
224 >A/CA/VRDL58,2009/07/21 ..........................................................A..................................A..................T.............A......
225 >A/Catalonia/S1756,2009/11/09 --------..................................................A..................................A..................T..................--
226 >A/Catalonia/S2056,2009/12/02 --------..................................................A..................................A..................T.................---
227 >A/Catalonia/S2060,2009/12/03 ---------.................................................A........................A.........A..................T.................---
228 >A/Singapore/ON2313,2009/11/17 ..........................................................A......................T...........A..................T....................
229 >A/Texas/JMS409,2010/01/20 ..........................................................A......................T...........A..................T....................
230 >A/Guangdong/1241,2009/11/19 ..................T.......................................A..................................A................T.T....................
231 >A/Guangdong/1249,2009/11/20 ..................T.......................................A..................................A................T.T....................
232 >A/Guangdong/1252,2009/11/19 ..................T.......................................A..................................A.A..............T.T....................
233 >A/Guangdong/1250,2009/11/20 ..................T.......................................A..................................A................T.T....................
234 >A/Sw/IL/10-001551-1,2009/12/20 .....................................................C....A.................................TA..................T....................
235 >A/Sw/IL/10-001551-2,2009/12/20 ..........................................A..........C....A.................................TA..................T....................
236 >A/Pune/NIV20007,2009/12/ ........G.............................T...................A.................................TA...C..............T....................
237 >A/Texas/JMS401,2010/01/03 ........G.................................................A..................................A..................T....................
238 >A/NY/7107,2009/12/23 ..........................................................A..................................A..................T....................
239 >A/Nagasaki/HA-10-7,2010/01/12 ................................A.........................A.A................................A..................T....................
240 >A/Nagasaki/HA-10-15,2010/02/01 ................................A.........................A.A................................A..................T....................
241 >A/Nagasaki/HA-10-17,2010/02/08 ................................A.........................A.A................................A..................T.......T...........A
242 >A/Nagasaki/HA-10-25,2010/03/08 ...............................C...........T..............A..................................A.........G........T...................A
243 >A/Nagasaki/HA-10-21,2010/02/22 ...............................C...........T..............A..................................A.........G........T....A...............
244 >A/Nagasaki/HA-10-18,2010/02/15 ...............................C...........T..............A..................................A.........G........T....A..T............
245 >A/NY/6292,2009/11/17 ....................A.....................................A..................................A..................T....A...............
246 >A/Singapore/GP4381,2009/11/18 ..............G.....A.....................................A..................................A..................T....................
247 >A/Singapore/GP3441,2009/08/31 ..........................................................A..................................A..................T....................
248 >A/Afghanistan/N10767,2009/09/ ..............................T.........................A.A.....G............................A..................T....................
249 >A/Afghanistan/N10974,2009/09/ ..............................T.........................A.A.....G............................A..................T....................
250 >A/Kuwait/N13111,2009/09/23 ..............................T.........................A.A.....G............................A..................T....................
251 >A/NY/INS150,2009/12/07 .............T....T.....................................A.A.....G............................A..................T....................
252 >A/CA/VRDL36,2009/09/24 ..........................................................A....Y.............................A..................T....................
253 >A/Singapore/GP4309,2009/11/12 ..........................................................A....T.............................A..................T....................
254 >A/Singapore/ON2172,2009/10/01 ...T.......G..............................................A..................................A..................T....................
255 >A/Gvardeyskiy/07,2009/12/ ----------------------------............G.................A..........................C.......A..................T.............A......
256 >A/CA/VRDL86,2009/10/09 ........................................G.................A..................................A..................T....................
257 >A/Texas/46193632,2009/10/19 ..........C.........................A.....................A..................................A..................T....................
258 >A/Egypt/N14645,2009/11/ ..........C...................................C...........A..................................A..................T.........G..........
259 >A/NY/6257,2009/11/15 .............................G................A...........A..................................A..................T....................
260 >A/Singapore/GP999,2010/02/26 .............................G............................A..................................A..................T..........A.........
261 >A/Guangdong/5024,2009/10/20 ..........................................................A..................................A..................T....................
262 >A/ferret/OR/27004-3,2009/10/23 .....A.................C..................................A..................................A..G...............T....................
263 >A/ferret/OR/27004,2009// .....A.................C..................................A..................................A..G...............T....................
264 >A/Catalonia/S1672,2009/11/02 ---------.................................................A...A............A..G..............A..................T...T............----
265 >A/Catalonia/S2169,2009/12/23 --------..........................C.......................A..................................A..................T.................---
266 >A/San Diego/INS63,2009/10/26 ..........................................................A.........C.....A............C.....A..................T....................
267 >A/Texas/JMS403,2010/01/04 ..........................................................A.........C.....A............C.....A..................T....................
268 >A/Texas/JMS389,2009/12/16 ..........................................................A.........C.....A............C.....A..................T....................
269 >A/Texas/JMS402,2010/01/04 ..........................................................A.........C.....AA...........C.....A..................T....................
270 >A/CA/VRDL13,2010/01/25 ....................................................C.....A.........C.....A............C.....A..................T....................
271 >A/CA/VRDL11,2010/01/26 ....................................................C.....A.........C.....A............C.....A..................T....................
272 >A/Texas/JMS406,2010/01/10 .................................................G..C.....A.........C.....A............C.....A..................T..................A.
273 >A/Texas/JMS405,2010/01/09 .................................................G........A.........C.....A............C.....A..................T..................A.
274 >A/cat/OR/29573,2009/11/09 ..........................................................A.........C.....A............C.....A..................T....................
275 >A/Texas/JMS397,2009/12/30 ..........................................................A.........C.....A............C..A..A.....C............T....................
276 >A/Texas/JMS398,2009/12/30 ..........................................................A.........C.....A............C..A..A.....C............T....................
277 >A/Texas/JMS399,2009/12/31 ..........................................................A.........C.....A............C..A..A.....C............T....................
278 >A/Texas/JMS400,2009/12/31 ..........................................................A.........C.....A............C..A..A.....C............T....................
279 >A/Texas/JMS410,2010/01/22 ....A.......................................C.............A.........C.....A............C.....A..................T....................
280 >A/CA/VRDL10,2010/02/11 ..........................................................A.........C..................C.....A..................T....................
281 >A/CA/VRDL100,2009/11/05 ............................G.....................A.......AG.................................A..................T....................
282 >A/CA/VRDL14,2010/01/25 ............................G.....................A.......AG.................................A..................T...T................
283 >A/CA/VRDL12,2010/01/27 ............................G.....................A.......AG.................................A..................T...T................
284 >A/NY/7020,2009/12/14 ............................................G.....A.......A..................................A..................T....................
285 >A/Nagasaki/HA-10-13,2010/01/18 ......G...........................................A.......A..................................A..................T....................
286 >A/San Diego/INS70,2009/11/05 ..........................................................A..................................A..................T...A................
287 >A/Texas/JMS369,2009/11/13 ..........................................................A..................................A..................T.....C.....A........
288 >A/Wisconsin/629-D01582,2009/11/17 .........................................................AA...........T......................A..................T...........A........
289 >A/Wisconsin/629-D00672,2009/12/08 .........................................................AA...........T......................A..................T...........A........
290 >A/Wisconsin/629-D00996,2009/12/16 .........................................................AA...........T......................A..................T...........A........
291 >A/Wisconsin/629-D01528,2009/11/29 .........................................................AA...........T......................A..................T...........A........
292 >A/NY/6668,2009/11/30 ..........................................................A..................................A..................T...........A........
293 >A/Texas/46223444,2009/10/22 ..........................................................A..................................A..................T...........A........
294 >A/Madrid/RC9,2009/11/03 -----------........................................T......A....................G.............A.............A....T--------------------
295 >A/Hamburg/INS92,2009/12/04 ..........................................................A....................G.............A..................T....................
296 >A/Guangdong/1240,2009/11/19 .C........................................................A..................................A..................T....................
297 >A/Singapore/ON2400,2009/12/11 .C.......C...................................A............A..................................A..................T....................
298 >A/Singapore/KK066,2010/01/27 .C.......C...................................A............A..................................A..................T....................
299 >A/Singapore/GP562,2010/02/02 TC.......C...................................A............A..................................A..................T....................
300 >A/Singapore/GP737,2010/02/12 .C.......C...................................A............A..................................A..................T....................
301 >A/Singapore/KK081,2010/02/12 .C.......C.....A.............................A.....T......A..................................A..................T....................
302 >A/Guangdong/1271,2009/11/19 ..........................................................A..A...............................A..................T....................
303 >A/Texas/JMS378,2009/11/26 .................T...C....................................A..................................A..................T.....C..............
304 >A/Texas/JMS379,2009/11/26 .................T...C....................................A..................................A..................T.....C..............
305 >A/Warsaw/INS100,2009/12/07 ..........................................................A.........................A........A.........G........T....................
306 >A/Athens/INS85,2009/12/13 ..........................................................A.........................A........A.........G........T....................
307 >A/Pune/NIV21123,2009/12/ ..........................................................A..................................A.........G........T.........G..........
308 >A/Singapore/ON2230,2009/10/19 ...........G....................................A.........A..................................A..................T.........G..........
309 >A/Singapore/GP4697,2009/12/10 ........................A.................................A..................................A..................T....................
310 >A/NY/6775,2009/12/05 ........................A........T..A.....................A............C.....................A..................T....................
311 >A/NY/6949,2009/12/14 ........................A.....T..T........................A............C.....................A..................T....................
312 >A/NY/6976,2009/12/14 ........................A.....T..T........................A............C.....................A..................T....................
313 >A/NY/7236,2009/12/28 ........................A........T........................A............C.....................A..................T....................
314 >A/NY/1796,2010/01/15 ........................A........T........................A............C.....................A..................T.A..................
315 >A/Wash.DC/INS21,2009/10/30 ........................A........T........................A............C....................TA.........G........T....................
316 >A/NY/6776,2009/12/04 ....A...................A........T.......G................A............C.....................A..................T....................
317 >A/NY/6903,2009/12/10 ..........A.............A........T........................A............C.....................A..................T....................
318 >A/NY/0259,2009/12/26 ........................A........T........................A............C.....................A..................T....................
319 >A/NY/2876,2010/01/20 ........................A........T........................A............C.....................A..................T....................
320 >A/Wash.DC/INS28,2009/10/23 T.......................A........T..................C.....A............C.....................A..................T....................
321 >A/Guangdong/1070,2009/11/21 T...................................................C.....A..................................A..................T........G.......T...
322 >A/Guangdong/1071,2009/11/18 T...................................................C.....A..................................A........G.........T........G.......T...
323 >A/Guangdong/1075,2009/11/19 T....T....................................................A..................................A........G.........T............A...T...
324 >A/Guangdong/1069,2009/11/20 T.........................................................A..........T.......................A........GG........T................T...
325 >A/Perm/CRIE-ZTS,2009/11/30 ..........................................................A..........T.......................A..................T.................C..
326 >A/CA/VRDL99,2009/11/05 .......................C..............T...................A..................................A..............A...T....................
327 >A/Cologne/INS136,2009/11/30 ..........................................................A...A..............................A.................AT....................
328 >A/NY/2960,2010/01/26 ........................A.................................A............C.....................A..................T....................
329 >A/Wisconsin/629-D00748,2009/09/21 ........................A.CT..............................A............C...................A.A..................T....................
330 >A/Wisconsin/629-D01102,2009/10/06 ........................A.CT..............................A............C...................A.A...............T..T....................
331 >A/Wisconsin/629-D02370,2009/11/05 ........................A.CT..............................A............C...................A.A...............T..T....................
332 >A/NY/6669,2009/12/01 ........................A................................AA............C......G..............A..................T....................
333 >A/Berlin/INS170,2009/12/11 ........................A.................................A............C.....................A..................T........G...........
334 >A/Athens/INS166,2009/12/26 ........................A.................................A............C...T.................A..................T....................
335 >A/Wisconsin/629-D01473,2009/12/07 ........................A.........................A.......A............C...T................TA..................T....................
336 >A/NY/98,2010/01/18 ........................A.................................A............C.....................A..................T....................
337 >A/NY/6079,2009/10/16 ........................A.................................A..A...A.....C.....................A..................T....................
338 >A/NY/3230,2010/01/25 ........................A.................................A....T.......C.....................A..................T....................
339 >A/CA/VRDL81,2009/10/01 ............T...........A...................................A................................A..................T....................
340 >A/Singapore/TT017,2010/01/08 ............T.............................................A..................................A..................T........G......A....
341 >A/Guangdong/1083,2009/11/24 ..........................................................A..................................A..................T................T...
342 >A/Texas/JMS381,2009/11/28 ...............A.........................................AA..........................CC......A.T................T....................
343 >A/Texas/JMS382,2009/11/28 ...............A.........................................AA..........................CC......A.T................T....................
344 >A/Singapore/ON2407,2009/12/13 .........................................................AA..................................A..................T....................
345 >A/Singapore/ON2416,2009/12/15 ............................................G.............A..................................A..................T....................
346 >A/Singapore/GP2362,2010/05/18 .............T...............G............................A..................................A..................T..............A.....
347 >A/Pune/NIV21115,2009/12/ ......................................T...A...............A..................................A...C..............T....................
348 >A/Wisconsin/629-D00401,2009/12/08 ..............G.........................G.................A........A.........................A..................T...........A........
349 >A/Sulaimani/05,2009/12/12 .C........................................................A........A.....................C...A..................T....................
350 >A/Texas/JMS411,2010/01/25 ...............A..T.............................A.........A..................C...............A..................T....................
351 >A/Sw/IL/17315-1,2010/03/18 .....................................................C.A..A..A..................G..A........TA..................T....................
352 >A/Sw/IL/17315-3,2010/03/18 .....................................................C.A..A..A..................G..A........TA..................T....................
353 >A/Sw/MO/15534,2010/03/24 .....................................................C.A..A..A..................G..A........TA..................T....................
354 >A/Nizhni Novgorod/CRIE-MEV,2009/07/30 ..........................................................A.......G.................A........A.........G........T.................C..
355 >A/Texas/JMS408,2010/01/12 ...................A....A........T.......G................A............C.....................A..................T....................
356 >A/Texas/JMS412,2010/02/01 ............................T.................C...........A.........C.....A............C.....A..................T....................
357 >A/Cancun-NY/Index/2009/04/15 ..........................................................A.....................................................T....................
---Index--------------------------------------CTGCGCACATTACCAGTCCCCTATGCTCAACTTATGGACCAAGCACTGGAGCTTGGGGTAGGTCAGAGTCATTTGGCTAAACAGGTTTGTGGCGTCATGTCGAACATGGCAGCCCCGCACAAAGGGGGGCTGT
-codon-position-------------------------------1 1 2 1 11 2212 1112 1 2 11 21112 11 1 1 1 1 2 11 1 1 1 1 1 21 21 1 2
0000000000000000000000000000000000000000000000000000000000000000000000000000000000011111111111111111111111111111111111111111111111111
0000000111111111112223333333344444444444455555555666666666666677777788888889999999900000011111111122222223333334444444555555555666666
2334799014466778993672334578923445567788913344466000234455568813556911456890133567801225801247788901455890022330014578113366679236689
5072839240135289145931030290942463962736561403905178190647834775342906726810534568182376049501925162817163569353860838280603674905831