swine flu sequences (thread from h5n1experts)

gsgs · Aug 18, 2010

Re: swine flu sequences (thread from h5n1experts)

----------posted:2009/05/28 , updated:2009/06/24--------------
now I found this:
http://www.biohealthbase.org/GSearc...nfluenza&extraPage=seperate#strainDetailTable
(click: show all)

Illinois/01/2009,04,24,09,M,27
Rhode Island/02/2009,04,28,09,M,29
Shandong/1/2009,05,10,09,M,19
Tennessee/05/2009,04,28,09,M,13

sequence names and specifications from mixin
--------------------------------------------

sorted by submission date

name,month,day,09,gender,age (other details)

Code:

May 8
Catalonia/148/2009,04,00,09,0,0 (spain) 
Catalonia/154/2009, 04,00,09,0,0 (spain) 
Stockholm/28/2009,04,30,09,F,49
Korea/01/2009,05,02,09,0,00  
New York/1669/2009,04,26,09,0,00  
New York/1682/2009,04,27,09,0,00  
Italy/08/2009,05,05,09,M,69 (first known secondary case in Italy)

May 7
Canada-NS/RV1535/2009,04,24,09,0,00  
Christchurch/2/2009,04,29,09,M,00  
Texas/15/2009,04,15,09,0,1   

May 6
Arizona/01/2009,04,22,09,M,8
Arizona/02/2009,04,26,09,F,11
California/04/2009,04,01,09,M,10
California/14/2009,04,25,09,M,13
Colorado/03/2009,04,27,09,M,44
Indiana/09/2009,04,22,09,F,19
Kansas/02/2009,04,24,09,M,54
Kansas/03/2009,04,24,09,F,48
Massachusetts/06/2009,04,26,09,M,9
Massachusetts/07/2009,04,25,09,M,13
Michigan/02/2009,04,26,09,F,34
Minnesota/02/2009,04,27,09,F,28
Nebraska/02/2009,04,00,09,M,48  
New York/09/2009,04,25,09,F,17
New York/13/2009,04,25,09,F,00  
New York/20/2009,04,25,09,F,15
New York/22/2009,04,24,09,M,14
Ohio/07/2009,04,24,09,M,9
South Carolina/09/2009,04,26,09,M,19
Texas/07/2009,04,25,09,M,24
Texas/08/2009,04,24,09,0,7  
Texas/09/2009,04,25,09,F,3

May 5
Castilla-La Mancha/GP13/2009,04,26,09,0,00 (Spain, Albacete)
Castilla-La Mancha/GP9/2009,04/26/09,0,00 (Spain,Albacete)
Pais Vasco/GP20/2009,04/26/09,0,00 (Spain, Donostia)
Valencia/GP4/2009,04/26/09,0,00 (Spain)
Italy/03/2009,05/03/09,0,00
Italy/04/2009,05/03/09,M,11
Italy/02/2009,04/30/09,M,25
Israel/G-640/2009,04/26/09,0,00  
Israel/G-645/2009,04/27/09,0,00  
Israel/MF-119/2009,05/02/09,0,00  
Israel/MF-70/2009,05.01/09,0,00  
Canada-NS/RV1535/2009,04/24/09,0,00 (Nova Scotiathis sequence version replaced gi:229484068.)  
Canada-ON/RV1527/2009,04/24/09,0,00 (Ontario)  
Mexico/InDRE4487/2009,04/14/09,0,00  

May 4, 2009
Denmark/513/2009,04/29/09,0,00  
Italy/01/2009,04/28/09,M,50 (returned from 6 mos. in Mex)
Italy/02/2009,00/00/09,0,00  
California/08/2009,04/09/09,F,16
New York/06/2009,04/25/09,F,21
New York/10/2009,04/25/09,F,17
New York/11/200904/25/09,F,16
New York/12/2009,04/25/09,F,17
New York/15/2009,04/25/09,M,15
New York/18/2009,04/25/09,M,15
New York/19/2009,04/25/09,F,14
New York/23/2009,04/24/09,F,17
New York/31/2009,04/24/09,F,14
Ohio/07/2009,04/24/09,M,9
Texas/06/2009,04/23/09,M,18
Regensburg/Germany/01/2009,04/27/09,M,37

May 1, 2009
California/07/2009,04/09/09,M,54
Switzerland/01/2009,04/28/09,0,00  
Texas/04/2009,04/14/09,M,16
Texas/05/2009,04/15/09,M,16

April 30, 2009
Auckland/3/2009,04/25/09,M,16
Auckland/2/2009,04/24/09,M,16
Auckland/1/2009,04/25/09,M,16
Regensburg/Germany/01/2009,04/27/09,M,37 
Toronto/3181/2009,04/00/09,F,24  
Toronto/3170/2009,04/00/09,F,22  
Toronto/3184/2009,04/00/09,F,22    
Toronto/3178/2009,04/00/09,M,29  
Toronto/3141/2009,04/00/09,M,28  
Toronto/3145/2009,04/00/09,F,22  
Toronto/3146/2009,04/00/09,F,22  
Netherlands/602/2009,04/29/09,0,00  

April 29
Regensburg/Germany/01/200,04/27/09,M,37 
California/06/2009,04/16/09,F,41
California/08/2009,04/09/09,F,16

April 28
New York/19/2009,04/25/09,F,14
New York/20/2009,04/25/09,F,15
Kansas/03/2009,04/24/09,F,48
Ohio/07/2009,04/24/09,M,9
California/04/2009,04/01/09,M,10
California/07/2009,04/09/09,M,54
California/08/2009,04/09/09,F,16
California/10/2009,04/08/09,F,00  
Texas/04/2009,04/14/09,M,16
Texas/05/2009,04/15/09,M,16

April 27
California/04/2009,04/01/09,M,10
California/05/2009,03/30/09,F,9
California/06/2009,04/16/09,F,41
California/07/2009,04/09/09,M,54
California/09/2009,04/15/09,M,7
Texas/04/2009,04/14/09,M,16
Texas/05/2009,04/15/09,M,16

sorted by country:

Code:

A/reassortant/IDCDC-RG15(Texas/05/2009 x Puerto Rico/8/1934
A/reassortant/NYMC X-179A(California/07/2009 x NYMC X-157
A/resassortant/IVR-153(A/California/07/2009 x IVR-6)
** Antigen_character : A/CALIFORNIA/07/2009-LIKE (H1N1)V
 
New York  
New York/04/2009 04-00-09 F 17
New York/05/2009 04-00-09 F 14
New York/06/2009 04-25-09 F 21
New York/08/2009 04-25-09 F 14
New York/09/2009 04-25-09 F 17
New York/10/2009 04-25-09 F17
New York/11/2009 04-25-09 F 16
New York/12/2009 04-25-09 F 17
New York/13/2009 04-25-09 F 17
New York/14/2009 04-00-09 F 17 
New York/15/2009 04-25-09 M 15
New York/16/2009 04-24-09 F 17
New York/18/2009 04-25-09 M 15 ** 
New York/19/2009 04-25-09 F 14
New York/20/2009 04-25-09 F 15
New York/21/2009 04-24-09 M 14
New York/22/2009 04-24-09 M 14
New York/23/2009 04-24-09 F 17
New York/24/2009 04-24-09 M 14
New York/25/2009 04-24-09 M 15  
New York/26/2009 04-24-09 F 17
New York/27/2009 04-00-09 M 14
New York/28/2009 04-00-09 F 14
New York/30/2009 04-00-09 F 17
New York/31/2009 04-24-09 F 14
New York/33/2009 04-25-09 F 14
New York/34/2009 04-25-09 F 14
New York/35/2009 04-25-09 F 16
New York/37/2009 04-25-09 F 17
New York/39/2009 04-25-09 F 25
New York/1669/2009 04-26-09  
New York/1682/2009 04-27-09
New York/3007/2009 04-27-09 u 33 Monroe
New York/3008/2009 04-27-09 u 50 Suffolk County 
New York/3012/2009 04-27-09 u 39 Orange County
New York/3014/2009 04-27-09 u 14 Chautauqua C.
New York/3049/2009 04-27-09 u 15 Orange C.

New York/3099/2009 04-29-09 u 9 Suffolk
New York/3166/2009 04-26-09 u 16 Queens
New York/3168/2009  04-28-09 u 9 Queens
New York/3169/2009 04-26-09 u 15 Queens
New York/3170/2009 05-02-09 u 24 Queens
New York/3172/2009 04-27-09 u 18 Otsego
New York/3173/2009 04-28-09 u 19 Queens
New York/3176/2009 04-26-09 u 15 
New York/3178/2009 04-28-09 u 12
New York/3181/2009 04-28-09 u 5
New York/3183/2009 04-28-09 u 10
New York/3184/2009 04-28-09 u 16
New York/3185/2009 04-29-09 u 17
New York/3186/2009 04-26-09 u 16
New York/3187/2009 05-01-09 u 15
New York/3188/2009 04-28-09 u 14
New York/3189/2009 04-28-09 u 12 Suffolk
New York/3190/2009 04-29-09 u 13
New York/3191/2009 04-25-09 u 15 Queens
New York/3193/2009 04-28-09 u 15 Queens
New York/3194/2009 04-30-09 u 9
New York/3195/2009 04-28-09 u 18 Nassau
New York/3196/2009 04-28-09 u 17
New York/3199/2009 04-28-09 u 15
New York/3202/2009 00-00-09 u 15 Queens
New York/3203/2009 04-27-09 u 51 Suffolk
New York/3204/2009 04-27-09 u 18 Queens
New York/3205/2009 04-26-09 u 14 Queens
New York/3214/2009 04-25-09 u 14 Queens
New York/3215/2009 04-25-09 u 15 Queens

New York/3218/2009 00-00-09 u 10
New York/3219/2009 00
New York/3220/2009 00 u 14
New York/3221/2009 00 u 15 Queens
New York/3222/2009 00 u 15 Queens
New York/3223/2009 00 u 16 Queens
New York/3232/2009 04-30-09 
New York/3234/2009 04-28-09 u 18
New York/3235/2009 04-28-09 u 14 Queens
New York/3237/2009 04-28-09 u 16 Queens
New York/3238/2009 04-28-09 u 17 Queens
New York/3239/2009 00-00-09 u 18 Queens
New York/3240/2009 00-00-09 u 5
New York/3242/2009 00-00-09 u 15 Queens
New York/3243/2009 00-00-09 u 14 Queens
New York/3244/2009 00-00-09 u 14 Queens

New York/3245/2009 00-00-09 u 16 Queens
New York/3246/2009 00-00-09 u 17 Nassau
New York/3252/2009 00-00-09 u 15 Queens
New York/3253/2009 00-00-09 u 17 Nassau
New York/3255/2009 00-00-09 u 17 Queens
New York/3257/2009 00-00-09 u 15 Queens
New York/3258/2009 00-00-09 u 20 Queens
New York/3259/2009 00-00-09 u 15 Queens
New York/3260/2009 04-27-09 u 18
New York/3261/2009 04-29-09
New York/3262/2009 04-27-09 u 15 Queens
New York/3263/2009 00 
New York/3264/2009 04-28-09
New York/3265/2009 04-29-09


____________________________________________________________ 
Arizona
Arizona/01/2009 04-22-09 M 8
Arizona/02/2009 04-26-09 F11
Arizona/03/2009 04-26-09 M 12
Arizona/04/2009 04-27-09 F 10
Arizona/06/2009 04-28-09 F 20  ** 
Arizona/07/2009 05-07-09 F 49
 
California
California/04/2009 04-01-09 M 10
California/05/2009 03-30-09 F 9
California/06/2009 04-16-09 F 41
California/07/2009 04-09-09 M 54
California/08/2009 04-09-09 F 16
California/09/2009 04-15-09 M 7
California/10/2009 04-08-09 F 
California/11/2009 04-24-09 M 20
California/12/2009 04-22-09 
California/13/2009 04-21-09
California/14/2009 04-25-09 M 13
California/17/2009 04-2-509 M 22
 
Texas
Texas/04/2009 04-14-09 M 16
Texas/05/2009 04-15-09 M 16
Texas/06/2009 04-23-09 M 18
Texas/07/2009 04-25-09 M 24
Texas/08/2009 04-24-09 u 7  
Texas/09/2009 04-25-09 F 3
Texas/15/2009 04-15-09 u 1
Texas/19/2009 04-26-09 F 33
Texas/22/2009 04-26-09 
Texas/23/2009 04-27-09 u 14  
 
All others
Alabama/02/2009 04-27-09 F 6
Colorado/03/2009 04-27-09  M 44
Colorado/04/2009 04-26-09 F 38
Delaware/02/2009 04-28-09 F 20
Delaware/03/2009 04-28-09 F 21
Delaware/04/2009 04-28-09 M 21
Delaware/05/2009 04-28-09 M 20 **
Delaware/08/2009 04-28-09 F 21 **
District of Columbia/01/2009 04-27-09 F 24 **
District of Columbia/02/2009 04-29-09 F 19
District of Columbia/03/2009 04-27-09 F 19
District of Colombia/450/2009 05-06-09
Florida/04/2009 04-27-09 F 18
Georgia/01/2009 04-27-09 F 12
Idaho/02/2009 04-28-09 F 61 **
Illinois/01/2009 04-24-09 M 27 **
Indiana/09/2009 04-22-09 F 19
Iowa/04/2009 04-24-09 F 35
Kansas/02/2009 04-24-09 M 54
Kansas/03/2009 04-24-09 F 48
Kentucky/05/2009 04-30-09 M 18 **
Louisiana/03/2009 05-01-09 F 1 **
Maryland/05/2009 04-29-09 F 40
Massachusetts/06/2009 04-26-09 M 9
Massachusetts/07/2009 04-25-09 M 13
Michigan/02/2009 04-26-09 F 34
Minnesota/02/2009 04-27-09 F 28
Minnesota/03/2009 04-00-09 F
Missouri/01/2009 04-27-09 F **
Missouri/02/2009 05-01-09 M 24
Missouri/023/2009 05-04-09 M 4
Nebraska/02/2009 04-00-09 M 48
Nebraska/03/2009 04-27-09 F 61
New Hampshire/02/2009 04-28-09 F 51
New Jersey/01/2009 04-00-09 F 12 
New Jersey/02/2009 04-00-09 F 22
New Jersey/04/2009 04-00-09 F 22
New Mexico/04/2009 04-26-09 M 18
Nevada/03/2009 04-26-09 F 2
Nevada/05/2009 04-29-09 F 38
North Carolina/05/2009 04-28-09 F 32
North Carolina/06/2009 04-28-09 M 42
North Dakota/04/2009 05-11-09 M 49
Ohio/07/2009 04-24-09 M 
Ohio/09/2009 05-05-09 M 9 **
Ohio/10/2009 04-30-09 F 41 **
Oklahoma/01/2009 04-28-09 F 28 **
Oklahoma/02/2009 04-29-09 F 9
Oregon/04/2009 04-27-09 F 58 **
Oregon/05/2009 04-29-09 F 8
Pennsylvania/06/2009 04-29-09 M 23 **
Rhode Island/02/2009 04-28-09 M 29 **
South Carolina/09/2009 04-26-09 M 19
South Carolina/11/2009 04-26-09 F 17 **
Tennessee/1-560/2009 05-01-09 (Memphis) *odd
Tennessee/05/2009 04-28-09 M 13
Washington/07/2009 04-28-09 F 22
Washington/09/2009 04-28-09 M 11
Washington/11/2009 04-26-09 M 42
Washington/12/2009 04-27-09 M 8
Wisconsin/08/2009 04-27-09 M 10
Wisconsin/09/2009 04-27-09 F 40
Virginia/04/2009 04-27-09 F 25 

____________________________________________________________ 
Australia
Brisbane/17/2009 05-07-09 F 28
Darwin/2001/2009 05-29-09 F 28 N. Territory
Perth/29/2009 05-26-09
Victoria/2001/2009 05-19-09 M 9
Victoria/2004/2009 05-21-09 M 25
 
Brazil
RiodeJaneiro/118/2009 05-05-09 M 21 (Brazil)
RiodeJaneiro/125/2009 05-06-09 M 19
Sao Paulo/1454/2009 04-29-09 M 26
Minas Gerais/65/2009 04-27-08 F 29 Brazil
 
Canada
swine/Alberta/OTH-33-8/2009 Suspected transmission of novel H1N1 virus from humans to pigs in Alberta
Toronto/3141/2009 04-00-09 M 28  
Toronto/3145/2009 04-00-09 F 22  
Toronto/3146/2009 04-00-09 F 22  
Toronto/3170/2009 04-00-09 F 22  
Toronto/3178/2009 04-00-09 M 29  
Toronto/3181/2009 04-00-09 F 24  
Toronto/3184/2009 04-00-09 F 22  
Canada-AB/RV1532/2009 
Canada-ON/RV1526/2009
Canada-ON/RV1527/2009 04-24-09 
Canada-ON/RV1529/2009
Canada-NS/RV1535/2009 04-24-09
Canada-NS/RV1536/2009 
Canada-NS/RV1538/2009
 
Chile
Chile/8886/2009 05-18-09 M 6 Santiago
Chile/8947/2009 05-17-09 F 44 Santiago
Chile/8949/2009 05-18-09 M 11 Santiago
Chile/9113/2009 05-19-09 M 24 Santiago
 
China
Beijing/01/2009 05-15-09 F 18
Beijing/3/2009 05-20-09 M 19
Beijing/4/2009 05-23-09 M 46
Beijing/501/2009 
Changsha/01/2009 05-24-09 China
Guangdong/1/2009 
Guangdong/02/2009 05-27-09 M 28 
Guangdong/03/2009 05-29-09
Guangdong/05/2009 05-29-09
Hong Kong/01/2009 04-30-09 M 25
Shandong/1/2009 05-10-09
Shanghai/1/2009 05-23-09 M 30
Sichuan/1/2009 05-10-09  
Zhejiang/1/2009
 
Columbia
Bogota/176/2009 04-27-09 
Bogota/224/2009 04-25-09
Colombia/08/2009 04-25-09 Zipaquira
Colombia/213/2009 04-30-09 Yopal
Colombia/450/2009 05-06-09 Casanare
 
France
Paris/2573/2009 04-29-09 F 24 Ile-de-France
Paris/2580/2009 04-30-09 F 24 Ile-de-France
Paris/2590/2009 04-30-09 F 24 Ile-de-France
Paris/2591/2009 05-01-09 M 23  Ile-de-France
Paris/2592/2009 05-01-09 M 23 Ile-de-France
Paris/2604/2009 05-05-09 F 24 Ile-de-France 
Paris/2629/2009 05-11-09 M 25 Ile-de-France
 
Germany
Regensburg/Germany/01/200 04-27-09 M 37
Bayern/63/2009
 
Greece
Athens/728/2009 05-18-09 M 19 one record replaced
Athens/761/2009 05-26-09 
Athens/793/2009 05-28-09
Athens/820/2009 05-31-09 M 30
 
Israel
Israel/G-640/2009 04-26-09
Israel/644/2009 04-00-09  
Israel/G-645/2009 04-27-09  
Israel/MF-119/2009 05-02-09  
Israel/MF-70/2009 05-01-09   
 
Italy
Italy/01/2009 04-28-09 M 50 (returned from 6 mos. in Mex)
Italy/02/2009 04-30-09 M 25
Italy/03/2009 05-03-09
Italy/04/2009 05-03-09 M 11
Italy/05/2009 00-00-09 M 45
Italy/06/2009 05-00-09
Italy/07/2009 00-00-09
Italy/08/2009 05-05-09 M 69 (first known secondary case in Italy)
Italy/09/2009 05-08-09 M 2 * /host="Homo sapiens; gender M; age 2; belonging to the 
                     first family cluster in Italy, including patients
                     harboring virus strains A/Italy/04/2009(H1N1) and
                     A/Italy/08/2009(H1N1)"= 60 year old male
Italy/11/2009 05-20-09 F 24 Student returning from New Yourk
Italy/12/2009 05-20-09 F 17 Student returning from NY
Italy/19/2009 05-20-09
Milan/UHSR1/2009 05-21-09 F 24
 
Japan
Amagasaki/1/2009  
Amagasaki/2/2009 
Fujian/1/2009 05-22-09 F 1
Hyogo/1/2009 05-17-09 
Hyogo/2/2009 05-17-09
Kobe/1/2009
Narita/1/2009 05-08-09 
Osaka-C/1/2009 05-16-09
Osaka-C/2/2009 05-17-09
Osaka/1/2009 05-16-09
Osaka/2/2009 05-16-09
 
Mexico
Mexico/InDRE4114/2009
Mexico/InDRE4487/2009 04-14-09
Monterrey/1/2009 05-07-09 M 
Monterrey/2/2009 05-08-09 M  Nuevo Leon 
Mexico/47N/2009 04-25-09 M 5 Mexico City
Mexico/3955/2009 04-02-09 F 9
Mexico/4108/2009 04-02-09 M 4 
Mexico/4115/2009 04-07-09 F 50
Mexico/4176/2009 04-13-09 M 12
Mexico/4269/2009 04-15-09 M 3
Mexico/4482/2009  04-14-09 F 29
Mexico/4486/2009 04-14-09 M 3
Mexico/4502/2009 04-17-09 F 3
Mexico/4516/2009 04-25-09 M 41
Mexico/4575/2009 04-20-09 F 49
Mexico/4593/2009 04-20-09 F 13
Mexico/4595/2009 04-20-09 F 8
Mexico/4603/2009 04-19-09 F 59
Mexico/4604/2009 04-19-09 F 52
Mexico/4627/2009 04-20-09 M 3
Mexico/4635/2009 04-20-09 F 30
Mexico/4646/2009 04-20-09 F 24
 
New Zealand
Auckland/1/2009 04-25-09 M 18
Auckland/2/2009 04-24-09 M 16
Auckland/3/2009 04-25-09 M 16
Auckland/4/2009 04-00-09 M
Christchurch/2/2009 04-29-09 M
 
Norway
Norway/1168/2009 05-07-09 M 21 Oslo Amantidine resistant (31N in M2)
Norway/1177/2009 05-08-09 F 20 Telemark
 
Phillipines
Philippines/2001/2009 05-20-09 F 10
Philippines/2003/2009 05-25-09 F 18
Philippines/2006/2009 05-25-09 F 18
Philippines/2009/2009 05-23-09 M 13  
 
Spain
Castilla-La Mancha/GP9/2009 04-26-09 Albacete
Castilla-La Mancha/GP13/2009 04-26-09
Pais Vasco/GP20/2009 04-26-09 Donostia
Valencia/GP4/2009 04-26-09 
Catalonia/3/2009 04-26-09
Catalonia/4/2009 04-26-09
Catalonia/8/2009 04-26-09
Catalonia/10/2009 04-26-09 
Catalonia/14/2009 04-26-09
Catalonia/25/2009 04-27-09
Catalonia/33/2009 04-27-09
Catalonia/43/2009 04-27-09
Catalonia/44/2009 04-27-09
Catalonia/48/2009 04-00-09
Catalonia/49/2009 04-27-09
Catalonia/50/2009 04-27-09
Catalonia/53/2009 05-00-09 
Catalonia/61/2009 04-28-09
Catalonia/63/2009 04-28-09
Catalonia/67/2009 04-29-09
Catalonia/79/2009 04-29-09
Catalonia/82/2009 04-29-09
Catalonia/88/2009 04-30-09
Catalonia/93/2009 04-30-09
Catalonia/117/2009 05-01-09 
Catalonia/122/2009 05-01-09
Catalonia/127/2009 05-01-09
Catalonia/128/2009 05-01-09
Catalonia/148/2009 04-00-09  
Catalonia/154/2009 04-00-09 
Catalonia/186/2009 05-00-09
 
Russia
Moscow/01/2009 05-21-09 
Moscow/02/2009 05-26-09
 
Sweden
Stockholm/29/2009 05-08-09 M 25
Stockholm/28/2009 04-30-09 F 49
 
Thailand
Thailand/104/2009 05-06-09
Nonthaburi/102/2009 05-06-09 
Nonthaburi/104/2009 05-10-09
 
Turkey
Istanbul/30/2009 05-14-09 M 26 
Ankara/1/2009 
 
All others
Denmark/513/2009 04-29-09
Dublin/01/200 05-01-09 * Patient received oseltamivir for 2 days prior to specimen collection
England/195/2009 04-28-09
Finland/553/2009 05-10-09
Korea/01/2009 05-02-09 
Lisboa/26/2009 04-00-09 Portugal Distrito de Aveiro
Malbran/017/2009 Argentina
Netherlands/602/2009 04-29-09
Poland/37/2009 05-05-09 F 58
Switzerland/01/2009 04-28-09

gsgs · Aug 18, 2010

Re: swine flu sequences (thread from h5n1experts)

-----------posted:2009/06/13 , updated:2009/06/29 --------------
new mutation table from 12.June
only viruses with more than 5555 nucleotides availbale
(out of ~13200 possible)
only polymorphisms which occur more than once among listed viruses

207 viruses,
111 from the Cancun-New York group
24 Cancun precursors (Korea-group)
35 Northern group
37 others

Code:

******-substrains
------------------

name (markers) [#30.May,#12.June]   marker1(segment),...
----------------------------------------------------------------
early Mex (0)[6,6]
   Northern (2)[8,9]         A1741C(3),C1118T(5)
      swine (6)[6,6]         A0588G(3),A1741C(3),C0022A(4),C1118T(5),A0283G(6),C0738A(8)
      Jersey (6)[6,8]        G0799A(1),A1741C(3),G0687T(4),A0877G(4),G1173A(4),C1118T(5)
      Hamburg (3)[10,12]     A1577G(1),A1741C(3),C1118T(5)
   Texas (7)[9,9]            G1308A(1),T0450C(2),A0561C(3),G1173A(4),G1563A(4),G0522A(7),A0775G(8)
   early US (3)[4,5]         A1218G(1),G1986T(3),A1044G(6) 
   airplane (1)[6,7]         G0546A(1)
     England (7)[7,9]        G0546A(1),A2030G(1),A0300G(2),A1058G(2),A0008G(3),C0145A(4),C0132T(5)
   Korea (3)[1,2]            G0298A(5),G1143A(5),G0316A(6)
      Japan (9)[9,9]            T1711C(1),G1945A(1),G0636A(2),T2000C(2),G0936A(3),G0298A(5),G1143A(5),G0316A(6),G0658A(8)
      pre-Cancun (5)[11,14]  C1408T(4),G0298A(5),G1143A(5),G0316A(6),A0742G(6)
         Cancun (11)[73,111] G2163A(1),T0658A(4),C1408T(4),G0298A(5),G1143A(5),G1248A(5),G0316A(6),A0742G(6),G0492A(7),G0600A(7),A0367G(8)

Code:

                                      0000000000000000111111111111112222 000000000000011111112222 000000000001111 00000000000000000000111111111111 00000000111111 00000000000011111111111 000000000 000000000000000 
                                      0000000034555789002233334567890122 011112344667800177790002 000556778992279 00012233566777788899000112224556 12236678011233 02223344777900001122333 124566689 012222344667777 
                                      0000011774448985161805573731743628 145569057038258605690370 045687290331348 02340978758111237939168796880561 36994687214424 44481511468545683523123 889207993 935679645572378 
                                      5678912291670981308181372791250340 936927000369589118050362 801180076069016 42759831687679377106280383128837 27879939783839 60736415286449201510790 902209623 438251746939858 
-codon-position-----------------------2 12 2  1  111  21   1  1211 12 1  12      2    2    2 22   21   1 22  1 1  1111211  1 2 2  1   1   1  111     111   12   2 1 111  11             1  1   1 1  11 12 1  21  12 
---Index------------------------------AGAGATATCAGCCGCGTAAAGATAAAGTTGAGAG CAGAGCATCGGCCAGGAGTCTGCG AGGAATCGGCGGAAG ACGCGTGAGTGATAAAAGGCGGGGAAAGCGGT CTGCGCGGGCGGAG AGGAGGGTACGCACCGGTTACAT GGGGGGCGG TGTCAAAGGGGGCAC 


------------original(6,6)---------------
 83 >A/NY/3178/2009/04/28             .....A............................ .....T.................. ............... ................................ .............. ....................... ......... ............... 
158 >A/Israel/644/2009/04/            .................................. ........................ ............... --.............................. .............. ....................... ......... ............... 
 90 >A/Mexico/4115/2009/04/07         ---------------------------------- ........................ --------------- ................................ .............. ....................... ......... ............... 
 91 >A/Mexico/InDRE4114/2009//        .................................. ................G....... ............... ...........G.................... .............. ....................... ......... ............... 
 92 >A/Mexico/InDRE4487/2009/04/14    .................................. ........................ ............... ................................ .............. ....................... ......... ............... 
207 >A/******/index/2009-02-01        .................................. ........................ ............... ................................ .............. ....................... ......... ............... 

----------swine(6,6)----------------
 67 >A/Nebraska/02/2009/04/           ---------------------------------- ............A........... --------------- .A.........R..........A......... ....AT.A.T.... ...G................... --------- ............A.. 
 68 >A/Colorado/03/2009/04/27         .................................. ............A........... ....G........C. .A....................A......... ....AT.AA..... ...G................... --------- --------------- 
 69 >A/Idaho/02/2009/04/28            .................................. ------------------------ --------------- .A....................A......... ....AT.A.T.... ...G................... --------- --------------- 
 88 >A/Sw/Alberta/OTH-33-8/2009//     ...........T...................... ........................ ....G........C. .A.............................. .........T.... ...G................... ......... ............A.. 
159 >A/CA/05/2009/03/30               .................................. ............A........... ....G........C. .A.............................. .....T...T.... ...G................... ......... --------------- 
160 >A/CA/06/2009/04/16               .................................. ................G....... ....G........C. .A.............................. .........T.... ...G................... ......... ............A.. 

-----------Jersey(6,8)----------
  1 >A/New Jersey/04/2009/04/         .............A.................... ------------------------ ............GC. ..........T.....G......A........ .........T.... ....................... ......... ........T...... 
  2 >A/NY/3183/2009/04/28             .............A.................... ........................ .............C. ..........T.....G......A........ .........T.... ....................... ......... ............... 
  3 >A/New Jersey/02/2009/04/         .............A.................... ------------------------ .............C. ..........T.....G......A........ .........T.... ....................... --------- ........T...... 
  4 >A/New Hampshire/02/2009/04/28    ---------------------------------- ------------------------ .............C. ..........T.....G......A........ .........T.... ....................... ......... --------------- 
  5 >A/Maryland/05/2009/04/29         .............A.................... ........................ .............C. ..........T.....G......A........ .........T.... ----------------------- --------- ............... 
  6 >A/NY/3099/2009/04/29             .............A.................... ........................ .............C. ..........T.....G......A........ .........T.... ....................... ......... ............... 
170 >A/NY/3100/2009/04/30             .............A.................... ........................ .............C. ..........T.....G......A........ .........T.... .........T............. ......... ............... 
206 >A/NY/1682/2009/04/27             .............A.................... ........................ .............C. ..........T.....G......A........ .........T.... .........T............. ......... ............... 

-----------Texas(9,9)--------
  8 >A/Texas/06/2009/04/23            ....................A............. ------------------------ --------------- .......................A......A. .............. ....................... ...A..... .............G. 
  9 >A/Texas/04/2009/04/14            ....................A............. .......C................ ...C........... ...........R.R.........A......A. .............. ....................... ...A..... .............G. 
 10 >A/North Carolina/05/2009/04/28   ....................A............. .......C................ ...C........... .......................A......A. .............. ....................... --------- --------------- 
 11 >A/Texas/08/2009/04/24            ....................A............. .......C................ ...C........... .............R.........A......A. .............. ....................... ...A..... .............G. 
 12 >A/Texas/05/2009/04/15            ....................A...........C. .......C................ ...C........... .......................A......A. .............. ....................... ...A..... .............G. 
 13 >A/Texas/22/2009/04/26            ---------------------------------- .......C................ --------------- .......................A......A. .............. .A..................... ...A..... C............G. 
 14 >A/Kansas/02/2009/04/24           .......C............A............. .......C................ --------------- .......................A......A. .............. .A..................... --------- C............G. 
 15 >A/Texas/09/2009/04/25            .......C............A............. .......C................ ...C........... .......................A......A. .............. .A..................... ...A..... C............G. 
 16 >A/Oklahoma/01/2009/04/28         ....................A............. ------------------------ --------------- .......................A......A. .............. ----------------------- --------- .............G. 

-----------California(4,5)--------------
 65 >A/CA/08/2009/04/09               ..................G.........C..... ........................ .....C........T .....C...........A..A........... .............. ----------------------- ......... ............... 
 66 >A/CA/07/2009/04/09               ..................G.........C..... ........................ .....C........T .....C...........A..A........... .............. ............G.......... ......... ............... 
157 >A/CA/04/2009/04/01               ..................G.........C..... .................A...... .....C........T .....C...........A..A........... .............. ............G.......... ......... ............... 
 73 >A/NY/3307/2009/05/01             ..................G............... ........................ ..............T ......A......................... .............. ............G.......... ......... .A............. 
134 >A/Texas/15/2009/04/15            ...............A..G............... ........................ ..............T ......A......................... .............. ............G.......... ......... .A............. 

-----------Hamburg(10,12)------------
162 >A/Illinois/01/2009/04/24         ---------------------------------- .G...................... --------------- ................................ .C.A.....T.... ..........A............ --------- ............... 
161 >A/NY/1669/2009/04/26             .........................G........ .G...................... .............C. ................................ .C.A.....T.... ..........A............ ......... ............... 
 93 >A/Washington/09/2009/04/28       ......................CG.G........ ------------------------ .............C. ................................ .........T.... ----------------------- --------- ..A............ 
 71 >A/NY/3240/2009//                 .........................G........ ........................ .............C. .................A.............. .........T.... ....................... ......... ............... 
174 >A/Canada-NS/RV1538/2009//        .........................G........ ..................C..... .............C. ...............G........G....... .........T.... ...................G... ......... ............... 
175 >A/Canada-NS/RV1535/2009/04/24    .........................G........ ........T.........C..... ........A....C. ...............G........G....... .........T.... ...................G... ......... ............... 
176 >A/Canada-NS/RV1536/2009//        .........................G........ ........T.........C..... ........A....C. ...............G........G....... .........T.... ...................G... ......... ............... 
178 >A/Kansas/03/2009/04/24           .........................G........ .....T.................. .............C. ..A................T------------ .C.A.....T.... ..........A............ ........A ..............T 
179 >A/Hamburg/4/2009//               .........................G........ ........................ .............C. ..A............................. .C.A.....T.... ..........A............ ......... ..............T 
202 >A/Guangdong/1/2009/05/18         ......................CG.G........ ..............A......... ...........A.C. .............................A.. .........T.... ...................G... ......... ..A............ 
203 >A/Guangdong/1/2009/05/17         ......................CG.G........ ..............A......... ...........A.C. .............................A.. .........T.... ...................G... ......... ..A............ 
205 >A/Mexico/4486/2009/04/14         .........................G.......- ........................ .............C. ......................A.....T... .........T.... ....................... ......... ............... 

------------Indiana(8,9)------------
136 >A/Mexico/47N/2009/04/25          .................................. ........................ .............C. ...A............................ .........T.... ..AG...............G... ......... ............... 
 72 >A/Mexico/4108/2009/04/03         .................................- ........................ .............C. .......................A........ .........T.... ....................... ........A ............... 
137 >A/Florida/04/2009/04/27          .................................. .......................A .......A.....C. ..A............................. .........T.... ....................... ......... --------------- 
 87 >A/Paris/2629/2009/05/11          .................................. .......................A .......A.....C. ................................ .........T.... ....................... ......... ............... 
201 >A/Arizona/02/2009/04/26          .................................. .......................A --------------- ................................ .........T.... ....................... ......... --------------- 
192 >A/Minnesota/02/2009/04/27        .................................. ...................T.... --------------- -------------------------------- .........T..G. .................C..... ......... ...T........... 
 64 >A/Minnesota/03/2009/04/          .................................. ...................T.... --------------- ........A............A.......... .........T..G. .................C..... ......... ...T........... 
  7 >A/Indiana/09/2009/04/22          .................................. .........A.........T.... .............C. ................................ .........T...A ......A................ ......... ............... 
168 >A/Texas/07/2009/04/25            .................................. ...................T.... --------------- ........A............A.......... .........T.... ----------------------- ......... ............... 

-------------airplane(6,7)---------------
199 >A/Beijing/4/2009/05/23           ..........A.............G......... .............G.......... ......T........ ................................ .............. .....A................. ......... ............... 
200 >A/Beijing/01/2009/05/16          ..........A....................... .............G.......... ......T........ ................................ .............. .....A................. ......... ............... 
198 >A/Tennessee/05/2009/04/28        ---------------------------------- ------------------------ ......T........ ................................ .............. .....A................. --------- ............... 
197 >A/Narita/1/2009/05/08            ..........A....................... .............G.......... ......T........ ................................ .............. .....A................. ......... ............... 
163 >A/Arizona/01/2009/04/22          ..........A....................... ------------------------ --------------- ................................ .............. ....................... ......... ............... 
135 >A/Paris/2573/2009/04/29          ..........AA...................... T....................... --------------- ..............G................. .............. ......A................ ......... ............... 
169 >A/Paris/2590/2009/04/30          ..........AA...................... T....................... ............... ..............G................. .............. -------------TTA....TTA ......... ............... 

------------England(7,9)----------------
171 >A/Paris/2592/2009/05/01          ..........A...................G... T.....G......G.......... G.............. ...A............................ T............. -------------TTA....TTA ......... ............... 
166 >A/Sichuan/1/2009/05/10           ..........A....................... ......G......G.......... ............... ...A............................ .............. ....................... ......... ............... 
165 >A/South Carolina/09/2009/04/26   ..........A....A..............G... ......G......G.......... --------------- ...A............................ T.......A..... ....................... ......... ............... 
164 >A/England/195/2009/04/28         ..........A...................G... ......G......G.......... G.............. ...A............................ T............. ....................... ......... ............... 
156 >A/Norway/1168/2009/05/07         ..........A.....C.............G... ..AGA.G......G.......... -.A............ ...A............................ T............. ....................... .......A. ............... 
155 >A/Norway/1177/2009/05/08         ..........A.....C.............G... -.AGA.G......G.......... -.A............ .T.A............................ T............. ....................... .......A. ............... 
 86 >A/NY/3177/2009/05/02             ..........A...................G... ......G......G.......... G.............. ...A............................ T............. ....................... ......... ............... 
 85 >A/NY/3181/2009/04/28             ..........A...................G... ......G......G.......... G.............. ...A............................ T............. ....................... ......... ............... 
 84 >A/Paris/2580/2009/04/30          ..........A...................G... T.....G......G.......... G.............. ...A............................ T............. ....................... ......... ............... 

----------Korea(11,16)------------------
 89 >A/Korea/01/2009/05/02            .................................. ........................ ............... ................................ ..A.......A... ....A.................. ......... .........A.....
204 >A/Italy/05/2009/05/03            .................................. .................A...... .............C. .................A.............. ..A........... ....A...G.............. ......... ............... 

---------pre-Cancun(11,14)--------------
167 >A/Texas/23/2009/04/27            .................................. ........................ --------------- ............................T... -------------- ....A...G.............. ......... ............... 
172 >A/Rhode Island/02/2009/04/28     ..............T................... .........A............T. --------------- G.................T.........T... ..A.......A... ....A...G.............. ......... ............... 
173 >A/Shandong/1/2009/05/10          ..............T................... .........A............T. ............... G.................T.........T... ..A.......A... ....A...G.............. ......... ............... 
193 >A/Michigan/02/2009/04/26         ........T.......................C. ...................T.... ............... ............................T... ..A.......A... ..A.A...G.............. ..A...... ............... 
194 >A/Mexico/4482/2009/04/14         ---------------------------------- ........................ ............... ............................T... ..A.......A... ....A...G.............. ......... --------------- 
195 >A/Mexico/4603/2009/04/19         .................................. ........................ ............... .............G..............T... ..A.......A... ....R...R.............. ......... ............... 
196 >A/Paris/2591/2009/05/01          .................................. ........................ ............... ............A...............T... ..A.......A... -------------TTA....TTA ......... ............... 
 94 >A/Beijing/3/2009/05/20           .................................. ........................ ............... ............................T..C ..A.......A... ....A...G..T........... .A....TA. ............... 
 95 >A/Beijing/501/2009/05/21         .................................. ........................ ...C........... ............................T..C ..A.......A... ....A...G..T........... .A....TA. ............... 
132 >A/Nonthaburi/102/2009//          .................G...G............ ------------------------ .........T..... ----------------.......--------- ..A.......A... ....A..CG.............. T........ ............... 
133 >A/THA/104/2009/05/06             .................G...G............ ------------------------ .........T..... .......G.................G..T... ..A.......A... ....A..CG.............. T........ ............... 
180 >A/Nonthaburi/102/2009/05/        .................G...G............ ........................ .........T..... .......G.................G..T... ..A.......A... ....A..CG.............. T........ ............... 
138 >A/Mexico/4604/2009/04/19         .................................. ........................ ............... ............................T... ..A.......A... ....A...G.............. ......... ............... 
 70 >A/Iowa/04/2009/04/24             ........................G......... ........................ ............... ............................T... ..A.......A... ----------------------- ......... ............... 

-------------Japan(9,9)---------
 74 >A/Kobe/1/2009//                  ...........................C.A.... ..........A.........C... ..........A.... ................................ ..A.......A... ....A.................. ......... .........A..... 
 75 >A/Amagasaki/1/2009//             ...........................C.A.... ..........A.........C... ..........A.... ................................ ..A.......A... ....A.................. ......... .........A..... 
 76 >A/Hyogo/2/2009/05/17             ...........................C.A.... ..........A.........C... ..........A.... ................................ ..A.......A... ....A.................. ......... .........A..... 
 77 >A/Amagasaki/2/2009//             ...........................C.A.... ..........A.........C... ..........A.... ................................ ..A.......A... ....A.................. ......... .........A..... 
 78 >A/Osaka/1/2009/05/16             ...........................C.A.... ..........A.........C... ..........A.... ................................ ..A.......A... ....A.................. ......... .........A..... 
 79 >A/Hyogo/1/2009/05/17             ...........................C.A.... ..........A.........C... ..........A.... ................................ ..A.......A... ....A.................. ......... .........A..... 
 80 >A/Osaka/2/2009/05/16             ...........................C.A.... ..........A.........C... ..........A.... ................................ ..A.......A... ....A.................. ......... .........A..... 
 81 >A/Osaka-C/2/2009/05/17           ...........................C.A.... ..........A.........C... ..........A.... ................................ ..A.......A... ....A.................. ......... .........A..... 
 82 >A/Osaka-C/1/2009/05/16           ...........................C.A.... ..........A.........C... ..........A.... ................................ ..A.......A... ....A.................. ......... .........A..... 

------Cancun(73,111)----------
 17 >A/NY/15/2009/04/25               ...............................A.. ........................ ............... -------------------------------- ..A.......AA.. ....A...G.............. ..A.A.... ......G........ 
 18 >A/Fujian/1/2009/05/22            ...............................A.. ........................ ............... .........A..................T... ..A.......AA.. ....A...G.............. ..A.A.... ......G........ 
 19 >A/NY/23/2009/04/24               ...............................A.. ........................ ............... .........A..................T... ..A.......AA.. ....A...G.............. ..A.A.... ......G........ 
 20 >A/NY/3227/2009/04/28             ...............................A.. ........................ ............... .........A..................T... ..A.......AA.. ....A...G.............. ..A.A.... ......G........ 
 21 >A/NY/3191/2009/04/25             ...............................A.. ........................ ............... .........A..................T... ..A.......AA.. ....A...G.............. ..A.A.... ......G........ 
 22 >A/NY/3204/2009/04/27             ...............................A.. ........................ ............... .........A..................T... ..A.......AA.. ....A...G.............. ..A.A.... ......G........ 
 23 >A/NY/3168/2009/04/26             ...............................A.. ........................ ............... .........A..................T... ..A.......AA.. ....A...G.............. ..A.A.... ......G........ 
 24 >A/NY/3188/2009/04/28             ...............................A.. ........................ ............... .........A..................T... ..A.......AA.. ....A...G.............. ..A.A.... ......G........ 
 25 >A/NY/3230/2009/04/28             ...............................A.. ........................ ............... .........A..................T... ..A.......AA.. ....A...G.............. ..A.A.... ......G........ 
 26 >A/NY/3243/2009//                 ...............................A.. ........................ ............... .........A..................T... ..A.......AA.. ....A...G.............. ..A.A.... ......G........ 
 27 >A/NY/3222/2009//                 ...............................A.. ........................ ............... .........A..................T... ..A.......AA.. ....A...G.............. ..A.A.... ......G........ 
 28 >A/NY/3172/2009/04/27             ...............................A.. ........................ ............... .........A..................T... ..A.......AA.. T...A...G.............. ..A.A.... ......G........ 
 29 >A/NY/3253/2009//                 ...............................A.. ........................ ............... .........A..................T... ..A.......AA.. T...A...G.............. ..A.A.... ......G........ 
 30 >A/NY/3260/2009/04/27             ...............................A.. ........................ ............... .........A..................T... ..A.......AA.. ....A...G.............. ..A.A.... ......G........ 
 31 >A/NY/10/2009/04/25               ...............................A.. ........................ ............... .........A..................T... ..A.......AA.. ....A...G.............. ..A.A.... ......G........ 
 32 >A/NY/3235/2009/04/28             ...............................A.. ........................ ............... .........A..................T... ..A.......AA.. ....A...G.............. ..A.A.... ......G........ 
 33 >A/CA/14/2009/04/25               ...............................A.A ........................ ............... .........A..................T... ..A.......AA.. ....A...G.............. ..A.A.... ......G........ 
 34 >A/NY/3221/2009//                 ...............................A.. ........................ ............... .........A..................T... ..A.......AA.. ....A...G.............. ..A.A.... ......G........ 
 35 >A/NY/3014/2009/04/27             ...............................A.. ........................ ............... .........A..................T... ..A.......AA.. ....A...G.............. ..A.A.... ......G........ 
 36 >A/NY/3257/2009//                 ...............................A.. ........................ ............... .........A..................T... ..A.......AA.. ....A...G.............. ..A.A.... ......G........ 
 37 >A/NY/3237/2009/04/28             ...............................A.. ........................ ............... .........A..................T... ..A.......AA.. ....A...G.............. ..A.A.... ......G........ 
 38 >A/NY/3255/2009//                 ...............................A.. ........................ ............... .........A..................T... ..A.......AA.. ....A...G.............. ..A.A.... ......G........ 
 39 >A/NY/3194/2009/04/30             ...............................A.. ........................ ............... .........A..................T... ..A.......AA.. ....A...G.............. ..A.A.... ......G........ 
 40 >A/NY/3008/2009/04/27             ...............................A.. ........................ ............... .........A..................T... ..A.......AA.. ....A...G.............. ..A.A.... ......G........ 
 41 >A/NY/06/2009/04/25               ...............................A.A ........................ ............... .........A..................T... ..A.......AA.. ....A...G.............. ..A.A.... ......G........ 
 42 >A/NY/3225/2009/04/27             ...............................A.. ........................ ............... .........A..................T... ..A.......AA.. ....A...G.............. ..A.A.... ......G........ 
 43 >A/NY/3170/2009/05/02             ...............................A.. ........................ ............... .........A..................T... ..A.......AA.. ....A...G.............. ..A.A.... ......G........ 
 44 >A/NY/3149/2009//                 ...............................A.. ........................ ............... .........A..................T... ..A.......AA.. ....A...G.............. ..A.A.... ......G........ 
 45 >A/NY/3176/2009/04/26             ...............................A.. ........................ ............... .........A..................T... ..A.......AA.. ....A...G.............. ..A.A.... ......G........ 
 46 >A/NY/3236/2009/04/28             ...............................A.. ........................ ............... .........A..................T... ..A.......AA.. ....A...G.............. ..A.A.... ......G........ 
 47 >A/NY/3234/2009/04/28             ...............................A.. ........................ ............... .........A..................T... ..A.......AA.. ....A...G.............. ..A.A.... ......G........ 
 48 >A/NY/3196/2009/04/28             ...............................A.. ........................ ............... .........A..................T... ..A.......AA.. ....A...G.............. ..A.A.... ......G........ 
 49 >A/Moscow/01/2009/05/21           ...............................A.. ........................ ............... .........A..................T... ..A.......AA.. ....A...G.............. ..A.A.... ......G........ 
 50 >A/NY/3201/2009//                 ...............................A.. ........................ ............... .........A..................T... ..A.......AA.. ....A...G.............. ..A.A.... ......G........ 
 51 >A/Canada-AB/RV1532/2009//        ...............................A.. ........................ ............... .........A..................T... ..A.......AA.. ....A...G.............. ..A.A.... ......G........ 
 52 >A/NY/12/2009/04/25               ---------------------------------- ........................ --------------- .........A..................T... ..A.......AA.. ....A...G.............. ..A.A.... ......G........ 
 53 >A/Nebraska/03/2009/04/27         ...............................A.. ........................ ............G.. .........A..................T... ..A.......AA.. ----------------------- --------- ......G........ 
 54 >A/Wash.DC/01/2009/04/27          ---------------------------------- ........................ --------------- .........A..................T... ..A.......AA.. ----------------------- ..A.A.... --------------- 
 55 >A/NY/3203/2009/04/27             ...............................A.. ........................ ............... .........A..................T... ..A.......AA.. ....A...G.............. ..A.A.... ......G........ 
 56 >A/New Jersey/01/2009/04/         ---------------------------------- ------------------------ ............... .........A..A...............T... ..A.......AA.. ....A...G.............. --------- --------------- 
 57 >A/NY/3244/2009//                 .....-T........................A.. ........................ ............... .........A..................T... ..A.......AA.. ....A...G.............. ..A.A.... ......G........ 
 58 >A/Canada-ON/RV1527/2009/04/24    ...............................A.. ........................ ............... .........A..................T... ..A.......AA.. ....A...G.............. ..A.AA... ......G........ 
 59 >A/Massachusetts/06/2009/04/26    ---------------------------------- ........................ --------------- .........A..................T... ..A.......AA.. ....A...G.............. ..A.A.... ......G........ 
 60 >A/Virginia/04/2009/04/27         ...............................A.. ------------------------ --------------- .........A..................T... ..A.......AA.. ....A...G.............. --------- ......G........ 
 61 >A/NY/3184/2009/04/28             ............A..................A.. ........................ ............... .........A..................T... ..A.......AA.. ....A...G.............. ..A.A.... ....G.G........ 
 62 >A/NY/3263/2009//                 GAGAG..........................A.. ........................ ............... .........A..................T... ..A.......AA.. ....A...G.............. ..A.A.... ......G........ 
 63 >A/NY/25/2009/04/24               ...............................A.. ...........T............ --------------- .........A...R..............T... -------------- ----------------------- ..A.A.... ......G........ 
 96 >A/Zhejiang/1/2009/05/23          ...............................A.. ........................ ............... .........A..................T... ..A.......AA.. ....A...G.............. ..A.A.... ......G........ 
 97 >A/NY/22/2009/04/24               ...............................A.. ........................ --------------- .........A..................T... ..A.......AA.. ....A...G.............. ..A.A.... ......G........ 
 98 >A/NY/3223/2009//                 ............A..................A.. ........................ ............... .........A..................T... ..A.......AA.. ....A...G.............. ..A.A.... ....G.G........ 
 99 >A/NY/3187/2009/05/01             ............A..................A.. ........................ ............... .........A..................T... ..A.......AA.. ....A...G.............. ..A.A.... ......G........ 
100 >A/NY/3189/2009/04/29             ...............................A.. ........................ ............... .........A..................T... ..A.......AA.. ....A...G.............. ..A.A.... ......G........ 
101 >A/NY/3258/2009//                 --.............................A.. ...........Y............ ............... .........A..................T... ..A.......AA.. ....A...G.............. ..A.A.... ......G........ 
102 >A/Moscow/02/2009/05/26           ...............................A.. ........................ ............... .........A..................T... ..A.......AA.. ....A...G.........C.... ..A.A.... ......G........ 
103 >A/NY/3220/2009//                 ...............................A.. ........................ ............... .........A..................T... ..A.......AA.. ....A...G.............. ..A.A.... ......G........ 
104 >A/NY/3252/2009//                 ...............................A.. ........................ ............... .........A..................T... ..A.......AA.. ....A...G.............. ..A.A.... ......G........ 
105 >A/NY/3169/2009/04/26             ...............................A.. ........................ ............... .........A..................T... ..A.......AA.. ....A...G.............. ..A.A.... ......G........ 
106 >A/NY/3264/2009/04/29             ...............................A.. ........................ ............... .........A..................T... ..A.......AA.. ....A...G.............. ..A.A.... ......G........ 
107 >A/NY/3239/2009//                 ...............................A.. ........................ ............... .........A..................T... ..A.......AA.. ....A...G.............. ..A.A.... ......G........ 
108 >A/NY/3185/2009/04/29             .....-T........................A.. ........................ ............... .........A..................T... ..A.......AA.. ....A...G.............. ..A.A.... ......G........ 
109 >A/NY/3261/2009/04/29             .....-T........................A.. ........................ ............... .........A..................T... ..A.......AA.. ....A...G.............. ..A.A.... ......G........ 
110 >A/NY/19/2009/04/25               ---------------------------------- ........................ ............... .........A..................T... ..A.......AA.. ....A...G.............. ..A.A.... ......G........ 
111 >A/NY/3245/2009//                 GAGAG..........................A.. ........................ ............... .........A..................T... ..A.......AA.. ....A...G.............. ..A.A.... ......G........ 
112 >A/NY/3262/2009/04/27             .AGAG..........................A.. ........................ ............... .........A..................T... ..A.......AA.. ....A...G.............. ..A.A.... ......G........ 
113 >A/NY/13/2009/04/25               ---------------------------------- ........................ ............... .........A...R..............T... ..A.......AA.. ....A...G.............. ..A.A.... ......G........ 
114 >A/NY/3313/2009/05/04             ...............................A.. ........................ ............... .........A..................T... ..A.......AA.. ....A...G.............. ..A.A.... ......G........ 
115 >A/NY/3207/2009/04/26             ...............................A.. ........................ ............... .........A..................T... ..A...A...AA.. ....A...G.............. ..A.A.... ......G........ 
116 >A/NY/21/2009/04/24               ...............................A.. ........................ ............R.. .........A..................T... ..A...A...AA.. ....A...G.............. --------- ......G........ 
117 >A/NY/3218/2009//                 ...............................A.. ........................ ............... .........A..................T... ..A.......AA.. ....A...G.............. ..A.A.... ......G........ 
118 >A/NY/3173/2009/04/28             ...............................A.. ........................ ............... .........A..................T... ..A.......AA.. ....A...G.............. ..A.A.... ......G........ 
119 >A/NY/3214/2009/04/25             ...............................A.. ........................ ............... .........A..................T... ..A.......AA.. ....A...G.............. ..A.A.... ......G........ 
120 >A/NY/3012/2009/04/27             ...............................A.. ........................ ............... .........A..................T... ..A.......AA.. ....A...G.............. ..A.A.... ......G........ 
121 >A/NY/3242/2009//                 ...............................A.. ........................ ............... .........A..................T... ..A.......AA.. ....A...G.............. ..A.A.... ......G........ 
122 >A/NY/3211/2009/04/28             ...............................A.. ........................ ............... .........A..................T... ..A.......AA.. ....A...G.............. ..A.A.... ......G........ 
123 >A/NY/3186/2009/04/26             ...............................A.. ........................ ............... .........A..................T... ..A.......AA.. ....A...G.............. ..A.A.... ......G........ 
124 >A/NY/3219/2009//                 ...............................A.. ........................ ............... .........A..................T... ..A.......AA.. ....A...G.............. ..A.A.... ......G........ 
125 >A/NY/3209/2009/04/25             ...............................A.. ........................ ............... .........A..................T... ..A.......AA.. ....A...G.............. ..A.A.... ......G........ 
126 >A/NY/3210/2009/04/24             ...............................A.. ........................ ............... .........A..................T... ..A.......AA.A ....A...G.............. ..A.A.... ......G........ 
127 >A/NY/3259/2009//                 ...............................A.. ........................ ............... .........A..................T... ..A.......AA.. ....A...G.............. ..A.A.... ......G........ 
128 >A/Canada-ON/RV1529/2009//        ...............................A.. ........................ ............... .........A................G.T... ..A.......AA.. ....A...G.............. ..A.AA... ......G........ 
129 >A/Guangdong/05/2009/05/29        ...............................A.. ........................ ............... .........A................G.T... ..A.......AA.. ....A...G.........C.... ..A.A.... ......G...T.... 
130 >A/Guangdong/02/2009/05/27        ...............................A.. ........................ ............... .........A................G.T... ..A.......AA.. ....A...G.........C.... ..A.A.... ......G...T.... 
131 >A/Guangdong/03/2009/05/29        .................................. ........................ ............... .........A..................T... ..........AA.. ....A...G.........C.... ....A.... ......G...T.... 
139 >A/NY/3202/2009//                 ...............................A.. ........................ ............... .........A..................T... ..A.......AA.. ....A...G.......A...... ..A.A.... ......G........ 
140 >A/NY/3195/2009/04/28             ..........................A....A.. ..............A......... ............... ....A....A..................T... ..A.......AA.. ....A...G.......A...... ..A.A.... ......G........ 
141 >A/NY/3199/2009/04/28             ..........................A....A.. ..............A......... ............... ....A....A..................T... ..A.......AA.. ....A...G.......A...... ..A.A.... ......G........ 
142 >A/Shanghai/71T/2009/05/31        ...............................A.. ...............A........ .....Y......... .........A...................... ..A.......AA.. ....A.............C.... ..A.A.... ......G........ 
143 >A/NY/3246/2009//                 GAGAG..........................A.. ........................ ............... .........A..................T... ..A.......AA.. ....A...G.............. ..A.A.... ......G........ 
144 >A/NY/3205/2009/04/26             --.............................A.. ........................ ............... .........A..................T... ..A.......AA.. ....A...G.............. ..A.A.... ......G........ 
145 >A/Bayern/63/2009//               ...............................A.- ...............A........ ............... .........A.................AT... ..A.......AA.. ....A...G.............. ..A.A.... ......G........ 
146 >A/NY/3007/2009/04/27             ...............................A.. ...............A........ ............... .........A.................AT... ..A.......AA.. ....A...G.............. ..A.A.... ......G........ 
147 >A/Georgia/01/2009/04/27          ...............................A.. ...............A........ --------------- .........A.G...............AT... ..A.......AA.. ....A...G.............. ..A.A.... ......G........ 
148 >A/Canada-ON/RV1526/2009//        ...............................A.. ...............A........ ............... .........W.................AT... ..A.......AA.. ....A...G.............. ..A.A.... ......G........ 
149 >A/Ohio/07/2009/04/24             ...............................A.. ...............A........ ............... --.......A..........------------ ..A.......AA.. ....A...G.............. ..A.A.... ......G........ 
150 >A/NY/20/2009/04/25               ...............................A.. ........................ ............... --.......A.........T------------ ..A.......AA.. ....A...G.............. ..A.A.... ......G........ 
151 >A/NY/3232/2009/04/30             ...............................A.. ........................ ............... G........A..................T... ..A.......AA.. ....A...G.............. ..A.A.... ......G........ 
152 >A/Tennessee/1-560/2009/05/01     ...............................A.. ........................ ............... -........A..................T... -------------- ....A...G.............. --------- --------------- 
153 >A/Shanghai/1/2009/05/23          .........G.........G...........R.. ...............A........ .A............. .........A.................AT... ..A.......AA.. ....A...G.............. ..A.A.... .....GG....A... 
154 >A/Shanghai/37T/2009/05/24        .........G.........G...........A.. ...............A........ .A............. .........A.................AT... ..A.......AA.. ....A...G.............. ..A.A.... .....GG....A... 
177 >A/Finland/553/2009/05/10         ---------------------------------- ------------------------ --------------- .........A...G..............T... ..A.......AA.. ....A...G.............. ..A.AA... ......G........ 
181 >A/NY/11/2009/04/25               ...............................A.. ........................ ............... .........A.R................T... ..A.......AA.. ....A...G.............. ..A.A.... ......G........ 
182 >A/NY/31/2009/04/24               ...............................A.. ------------------------ ............... .........A.R................T... ..A.......AA.. ....A...G.............. ..A.A.... ......G........ 
183 >A/NY/3265/2009/04/29             ...............................A.. ........................ ............... .........A..................T... ..A.......AA.. ....A...G.............. ..A.A.... ......G........ 
184 >A/NY/18/2009/04/25               ...............................A.. .....................A.. ............... .........A...R..............T... ..A.......AA.. ....A...G.............. ..A.A.... ......GA....... 
185 >A/NY/3193/2009/04/28             ...............................A.. .....................A.. ............... .........A..................T... ..A.......AA.. ....A...G.............. ..A.A.... ......GA....... 
186 >A/NY/3215/2009/04/25             ...............................A.. ------------------------ ............... .........A..................T... ..A.......AA.. ....A...G.............. ..A.A.... ......G........ 
187 >A/NY/3166/2009/04/26             ...............................A.. ...........T............ ............... .........A..................T... ..A.......AA.. ....A...G.......A...... ..A.A.... ......G........ 
188 >A/NY/3002/2009/04/25             ...............................A.. ........................ ............... .........A..................T... ..A.......AA.. ....A...G.......A...... ..A.A.... ......G........ 
189 >A/NY/3238/2009/04/28             -------........................A.. -....................... -.............. -........A..................T... ..A.......AA.. ....A...G.......A...... ..A.A.... ......G........ 
190 >A/NY/3049/2009/04/27             GAGAGAT........................A.. ........................ ............... .........A..................T... ..A.......AA.. ....A...G.............. ..A.A.... ......G........ 
191 >A/NY/3190/2009/04/29             ........T......................A.. ........................ ............... .........A..................T... ..A.......AA.. ....A...G.............. ..A.A.... ......G........ 

                                                                                                                                                                                                                    
---Index------------------------------AGAGATATCAGCCGCGTAAAGATAAAGTTGAGAG CAGAGCATCGGCCAGGAGTCTGCG AGGAATCGGCGGAAG ACGCGTGAGTGATAAAAGGCGGGGAAAGCGGT CTGCGCGGGCGGAG AGGAGGGTACGCACCGGTTACAT GGGGGGCGG TGTCAAAGGGGGCAC 
-codon-position-----------------------2 12 2  1  111  21   1  1211 12 1  12      2    2    2 22   21   1 22  1 1  1111211  1 2 2  1   1   1  111     111   12   2 1 111  11             1  1   1 1  11 12 1  21  12 
                                      0000000000000000111111111111112222 000000000000011111112222 000000000001111 00000000000000000000111111111111 00000000111111 00000000000011111111111 000000000 000000000000000 
                                      0000000034555789002233334567890122 011112344667800177790002 000556778992279 00012233566777788899000112224556 12236678011233 02223344777900001122333 124566689 012222344667777 
                                      0000011774448985161805573731743628 145569057038258605690370 045687290331348 02340978758111237939168796880561 36994687214424 44481511468545683523123 889207993 935679645572378 
                                      5678912291670981308181372791250340 936927000369589118050362 801180076069016 42759831687679377106280383128837 27879939783839 60736415286449201510790 902209623 438251746939858

----------------------------------------------

here the data from biohealthbase, 27.June:

A/Alabama/02/2009(H1N1),27/4/2009,F,6
A/Amagasaki/1/2009(H1N1),2009,,
A/Amagasaki/2/2009(H1N1),2009,,
A/Ankara/1/2009(H1N1),2009,,
A/Arizona/01/2009(H1N1),22/4/2009,M,8
A/Arizona/02/2009(H1N1),26/4/2009,F,11
A/Arizona/03/2009(H1N1),26/4/2009,M,12
A/Arizona/04/2009(H1N1),27/4/2009,F,10
A/Arizona/07/2009(H1N1),7/5/2009,F,49
A/Athens/728/2009(H1N1),18/5/2009,M,19
A/Athens/761/2009(H1N1),26/5/2009,,
A/Athens/793/2009(H1N1),28/5/2009,,
A/Athens/820/2009(H1N1),31/5/2009,M,30
A/Athens/893/2009(H1N1),9-Jun-2009,M,24
A/Athens/896/2009(H1N1),9-Jun-2009,F,28
A/Athens/918/2009(H1N1),11-Jun-2009,F,33
A/Athens/919/2009(H1N1),11-Jun-2009,M,46
A/Athens/920/2009(H1N1),11-Jun-2009,F,18
A/Athens/924/2009(H1N1),12-Jun-2009,M,22
A/Athens/926/2009(H1N1),12-Jun-2009,M,8.5m
A/Athens/939/2009(H1N1),12-Jun-2009,F,51
A/Athens/940/2009(H1N1),12-Jun-2009,F,18
A/Athens/943/2009(H1N1),12-Jun-2009,F,10 month
A/Athens/948/2009(H1N1),13-Jun-2009,F,20
A/Auckland/1/2009(H1N1),25/4/2009,M,18
A/Auckland/2/2009(H1N1),24/4/2009,M,16
A/Auckland/3/2009(H1N1),25/4/2009,M,16
A/Auckland/4/2009(H1N1),4/2009,M,
A/Bayern/63/2009(H1N1),2009,,
A/Beijing/01/2009(H1N1),15/5/2009,F,18
A/Beijing/3/2009(H1N1),20/5/2009,M,19
A/Beijing/4/2009(H1N1),23/5/2009,M,46
A/Beijing/501/2009(H1N1),2009,,
A/Belfast/1/2009(H1N1),2009,,
A/Bogota/176/2009(H1N1),27/4/2009,,
A/Bogota/224/2009(H1N1),25/4/2009,,
A/Brisbane/17/2009(H1N1),7/5/2009,F,28
A/California/04/2009(H1N1),5-Jun-2009,M,10
A/California/05/2009(H1N1),30/3/2009,F,9
A/California/06/2009(H1N1),16/4/2009,F,41
A/California/07/2009(H1N1),9/4/2009,M,54
A/California/08/2009(H1N1),9/4/2009,F,16
A/California/09/2009(H1N1),15/4/2009,M,7
A/California/10/2009(H1N1),8/4/2009,F,
A/California/11/2009(H1N1),24/4/2009,M,20
A/California/12/2009(H1N1),22/4/2009,,
A/California/13/2009(H1N1),21/4/2009,,
A/California/14/2009(H1N1),25/4/2009,M,13
A/California/17/2009(H1N1),25/4/2009,M,22
A/Canada-AB/RV1532/2009(H1N1),2009,,
A/Canada-NS/RV1535/2009(H1N1),24/4/2009,,
A/Canada-NS/RV1536/2009(H1N1),2009,,
A/Canada-NS/RV1538/2009(H1N1),2009,,
A/Canada-ON/RV1526/2009(H1N1),2009,,
A/Canada-ON/RV1527/2009(H1N1),24/4/2009,,
A/Canada-ON/RV1529/2009(H1N1),2009,,
A/Castilla-La Mancha/GP13/2009(H1N1),26/4/2009,,
A/Castilla-La Mancha/GP9/2009(H1N1),26/4/2009,,
A/Castro/JXP/2009(H1N1),11-Jun-2009,F,26
A/Catalonia/10/2009(H1N1),26/4/2009,,
A/Catalonia/117/2009(H1N1),1/5/2009,,
A/Catalonia/122/2009(H1N1),1/5/2009,,
A/Catalonia/127/2009(H1N1),1/5/2009,,
A/Catalonia/128/2009(H1N1),1/5/2009,,
A/Catalonia/14/2009(H1N1),26/4/2009,,
A/Catalonia/148/2009(H1N1),2/5/2009,,
A/Catalonia/154/2009(H1N1),2/5/2009,,
A/Catalonia/186/2009(H1N1),5/2009,,
A/Catalonia/20/2009(H1N1),26/4/2009,,
A/Catalonia/25/2009(H1N1),27/4/2009,,
A/Catalonia/3/2009(H1N1),26/4/2009,,
A/Catalonia/308/2009(H1N1),25/5/2009,,
A/Catalonia/317/2009(H1N1),28/5/2009,,
A/Catalonia/329/2009(H1N1),3-Jun-2009,,
A/Catalonia/33/2009(H1N1),27/4/2009,,
A/Catalonia/331/2009(H1N1),3-Jun-2009,,
A/Catalonia/360/2009(H1N1),15-Jun-2009,,
A/Catalonia/362/2009(H1N1),16-Jun-2009,,
A/Catalonia/366/2009(H1N1),18-Jun-2009,,
A/Catalonia/4/2009(H1N1),26/4/2009,,
A/Catalonia/43/2009(H1N1),27/4/2009,,
A/Catalonia/44/2009(H1N1),27/4/2009,,
A/Catalonia/48/2009(H1N1),4/2009,,
A/Catalonia/49/2009(H1N1),27/4/2009,,
A/Catalonia/50/2009(H1N1),27/4/2009,,
A/Catalonia/53/2009(H1N1),5/2009,,
A/Catalonia/61/2009(H1N1),28/4/2009,,
A/Catalonia/63/2009(H1N1),28/4/2009,,
A/Catalonia/67/2009(H1N1),29/4/2009,,
A/Catalonia/79/2009(H1N1),29/4/2009,,
A/Catalonia/8/2009(H1N1),26/4/2009,,
A/Catalonia/82/2009(H1N1),29/4/2009,,
A/Catalonia/88/2009(H1N1),30/4/2009,,
A/Catalonia/93/2009(H1N1),30/4/2009,,
A/Changsha/01/2009(H1N1),24/5/2009,,
A/Chile/8886/2009(H1N1),18/5/2009,M,6
A/Chile/8947/2009(H1N1),17/5/2009,F,44
A/Chile/8949/2009(H1N1),18/5/2009,M,11
A/Chile/9113/2009(H1N1),19/5/2009,M,24
A/Christchurch/2/2009(H1N1),29/4/2009,M,
A/Colombia/08/2009(H1N1),25/4/2009,,
A/Colombia/213/2009(H1N1),30/4/2009,,
A/Colombia/450/2009(H1N1),6/5/2009,,
A/Colorado/03/2009(H1N1),27/4/2009,M,44
A/Colorado/04/2009(H1N1),26/4/2009,F,38
A/Darwin/2001/2009(H1N1),29/5/2009,F,28
A/Delaware/02/2009(H1N1),28/4/2009,F,20
A/Delaware/03/2009(H1N1),28/4/2009,F,21
A/Delaware/04/2009(H1N1),28/4/2009,M,21
A/Delaware/05/2009(H1N1),28/4/2009,M,20
A/Delaware/08/2009(H1N1),28/4/2009,F,21
A/Denmark/513/2009(H1N1),29/4/2009,,
A/District of Columbia/01/2009(H1N1),27/4/2009,F,24
A/District of Columbia/02/2009(H1N1),29/4/2009,F,19
A/District of Columbia/03/2009(H1N1),27/4/2009,F,19
A/Dublin/01/2009(H1N1),1/5/2009,,
A/Dublin/02/2009(H1N1),25/5/2009,,
A/Dublin/03/2009(H1N1),26/5/2009,F,21
A/Dublin/04/2009(H1N1),29/5/2009,M,38
A/Dublin/05/2009(H1N1),31/5/2009,F,29
A/Dublin/06/2009(H1N1),1-Jun-2009,M,
A/Dublin/07/2009(H1N1),1-Jun-2009,M,
A/Dublin/08/2009(H1N1),3-Jun-2009,F,31
A/Dublin/09/2009(H1N1),2-Jun-2009,F,26
A/Dublin/10/2009(H1N1),4-Jun-2009,F,49
A/England/195/2009(H1N1),28/4/2009,,
A/Finland/553/2009(H1N1),10/5/2009,,
A/Finland/554/2009(H1N1),26/5/2009,,
A/Finland/555/2009(H1N1),28/5/2009,,
A/Florida/04/2009(H1N1),27/4/2009,F,18
A/Fujian/1/2009(H1N1),22/5/2009,F,1
A/Fukuoka-C/1/2009(H1N1),2009,,
A/Fuzhou/01/2009(H1N1),28/5/2009,,
A/Georgia/01/2009(H1N1),27/4/2009,F,12
A/Guangdong/02/2009(H1N1),29/5/2009,M,28
A/Guangdong/03/2009(H1N1),29/5/2009,,
A/Guangdong/05/2009(H1N1),29/5/2009,,
A/Guangdong/1/2009(H1N1),18/5/2009,M,60
A/GuangzhouSB/01/2009(H1N1),18/5/2009,M,59
A/Hamburg/4/2009(H1N1),2009,,
A/Himeji/1/2009(H1N1),2009,,
A/Hong Kong/01/2009(H1N1),30/4/2009,M,25
A/Hyogo/1/2009(H1N1),17/5/2009,,
A/Hyogo/2/2009(H1N1),17/5/2009,,
A/Idaho/02/2009(H1N1),28/4/2009,F,61
A/Illinois/01/2009(H1N1),24/4/2009,M,27
A/Indiana/09/2009(H1N1),22/4/2009,F,19
A/Iowa/04/2009(H1N1),24/4/2009,F,35
A/Israel/644/2009(H1N1),4/2009,,
A/Israel/G-640/2009(H1N1),26/4/2009,,
A/Israel/G-645/2009(H1N1),27/4/2009,,
A/Israel/MF-119/2009(H1N1),2/5/2009,,
A/Israel/MF-70/2009(H1N1),1/5/2009,,
A/Istanbul/30/2009(H1N1),14/5/2009,M,26
A/Italy/01/2009(H1N1),28/4/2009,M,50
A/Italy/02/2009(H1N1),30/4/2009,,
A/Italy/03/2009(H1N1),3/5/2009,,
A/Italy/04/2009(H1N1),3/5/2009,,
A/Italy/05/2009(H1N1),3/5/2009,M,45
A/Italy/06/2009(H1N1),5/2009,,
A/Italy/07/2009(H1N1),2009,,
A/Italy/08/2009(H1N1),5/5/2009,M,69
A/Italy/09/2009(H1N1),8/5/2009,M,2
A/Italy/11/2009(H1N1),20/5/2009,F,24
A/Italy/12/2009(H1N1),20/5/2009,F,17
A/Italy/19/2009(H1N1),20/5/2009,,
A/Italy/20/2009(H1N1),7-Jun-2009,M,37
A/Italy/43/2009(H1N1),3-Jun-2009,,
A/Italy/44/2009(H1N1),2009,,
A/Italy/45/2009(H1N1),5-Jun-2009,,
A/Italy/46/2009(H1N1),5-Jun-2009,,
A/Italy/47/2009(H1N1),5-Jun-2009,,
A/Italy/48/2009(H1N1),5-Jun-2009,,
A/Italy/49/2009(H1N1),27/5/2009,F,26
A/Italy/60/2009(H1N1),2009,,
A/Jiangsu/1/2009(H1N1),13-Jun-2009,,
A/Kaluga/01/2009(H1N1),22/5/2009,,
A/Kansas/02/2009(H1N1),24/4/2009,M,54
A/Kansas/03/2009(H1N1),24/4/2009,F,48
A/Kentucky/05/2009(H1N1),30/4/2009,M,18
A/Kobe/1/2009(H1N1),2009,,
A/Korea/01/2009(H1N1),2/5/2009,,
A/Lisboa/26/2009(H1N1),4/2009,,
A/Louisiana/03/2009(H1N1),1/5/2009,F,1
A/Louisiana/04/2009(H1N1),30/4/2009,F,13
A/Malbran/017/2009(H1N1),2009,,
A/Maryland/05/2009(H1N1),29/4/2009,F,40
A/Massachusetts/06/2009(H1N1),26/4/2009,M,9
A/Massachusetts/07/2009(H1N1),26/4/2009,M,13
A/Mexico City/1/2009(H1N1),1/5/2009,,18
A/Mexico City/10/2009(H1N1),1/5/2009,,61
A/Mexico City/100/2009(H1N1),2/5/2009,,55
A/Mexico City/101/2009(H1N1),2/5/2009,,28
A/Mexico City/102/2009(H1N1),2/5/2009,,23
A/Mexico City/103/2009(H1N1),4/5/2009,,5
A/Mexico City/104/2009(H1N1),4/5/2009,,46
A/Mexico City/105/2009(H1N1),4/5/2009,,21
A/Mexico City/106/2009(H1N1),5/5/2009,,8
A/Mexico City/11/2009(H1N1),1/5/2009,,4
A/Mexico City/12/2009(H1N1),1/5/2009,,5
A/Mexico City/13/2009(H1N1),1/5/2009,,44
A/Mexico City/14/2009(H1N1),1/5/2009,,9
A/Mexico City/15/2009(H1N1),1/5/2009,,20
A/Mexico City/16/2009(H1N1),1/5/2009,,9
A/Mexico City/17/2009(H1N1),1/5/2009,,16
A/Mexico City/18/2009(H1N1),1/5/2009,,2
A/Mexico City/19/2009(H1N1),1/5/2009,,56
A/Mexico City/2/2009(H1N1),1/5/2009,,8
A/Mexico City/20/2009(H1N1),1/5/2009,,10
A/Mexico City/21/2009(H1N1),2/5/2009,,8
A/Mexico City/22/2009(H1N1),2/5/2009,,70
A/Mexico City/23/2009(H1N1),2/5/2009,,45
A/Mexico City/24/2009(H1N1),2/5/2009,,1
A/Mexico City/25/2009(H1N1),2/5/2009,,6 months
A/Mexico City/26/2009(H1N1),2/5/2009,,46
A/Mexico City/27/2009(H1N1),2/5/2009,,7 months
A/Mexico City/28/2009(H1N1),2/5/2009,,17
A/Mexico City/29/2009(H1N1),2/5/2009,,13
A/Mexico City/3/2009(H1N1),1/5/2009,,59
A/Mexico City/30/2009(H1N1),2/5/2009,,13
A/Mexico City/31/2009(H1N1),2/5/2009,,9
A/Mexico City/32/2009(H1N1),2/5/2009,,10
A/Mexico City/33/2009(H1N1),2/5/2009,,40
A/Mexico City/34/2009(H1N1),2/5/2009,,29
A/Mexico City/35/2009(H1N1),2/5/2009,,7
A/Mexico City/36/2009(H1N1),2/5/2009,,12
A/Mexico City/37/2009(H1N1),2/5/2009,,7
A/Mexico City/38/2009(H1N1),2/5/2009,,28
A/Mexico City/39/2009(H1N1),2/5/2009,,36
A/Mexico City/4/2009(H1N1),1/5/2009,,32
A/Mexico City/40/2009(H1N1),2/5/2009,,8
A/Mexico City/41/2009(H1N1),2/5/2009,,8
A/Mexico City/42/2009(H1N1),2/5/2009,,56
A/Mexico City/43/2009(H1N1),3/5/2009,,34
A/Mexico City/44/2009(H1N1),3/5/2009,,22
A/Mexico City/45/2009(H1N1),3/5/2009,,10
A/Mexico City/46/2009(H1N1),3/5/2009,,27
A/Mexico City/47/2009(H1N1),3/5/2009,,12
A/Mexico City/48/2009(H1N1),3/5/2009,,15
A/Mexico City/49/2009(H1N1),3/5/2009,,10
A/Mexico City/5/2009(H1N1),1/5/2009,,16
A/Mexico City/50/2009(H1N1),3/5/2009,,3
A/Mexico City/51/2009(H1N1),3/5/2009,,35
A/Mexico City/52/2009(H1N1),3/5/2009,,22
A/Mexico City/53/2009(H1N1),3/5/2009,,27
A/Mexico City/54/2009(H1N1),3/5/2009,,3
A/Mexico City/55/2009(H1N1),3/5/2009,,5
A/Mexico City/56/2009(H1N1),3/5/2009,,5
A/Mexico City/57/2009(H1N1),3/5/2009,,7
A/Mexico City/58/2009(H1N1),3/5/2009,,21
A/Mexico City/59/2009(H1N1),3/5/2009,,19
A/Mexico City/6/2009(H1N1),1/5/2009,,34
A/Mexico City/60/2009(H1N1),3/5/2009,,19
A/Mexico City/61/2009(H1N1),3/5/2009,,30
A/Mexico City/62/2009(H1N1),3/5/2009,,3
A/Mexico City/63/2009(H1N1),3/5/2009,,32
A/Mexico City/64/2009(H1N1),3/5/2009,,5
A/Mexico City/65/2009(H1N1),5/5/2009,,1
A/Mexico City/66/2009(H1N1),5/5/2009,,12
A/Mexico City/67/2009(H1N1),5/5/2009,,39
A/Mexico City/68/2009(H1N1),5/5/2009,,6
A/Mexico City/69/2009(H1N1),4/5/2009,,19
A/Mexico City/7/2009(H1N1),1/5/2009,,59
A/Mexico City/70/2009(H1N1),4/5/2009,,4
A/Mexico City/71/2009(H1N1),4/5/2009,,12
A/Mexico City/72/2009(H1N1),4/5/2009,,15
A/Mexico City/73/2009(H1N1),4/5/2009,,2
A/Mexico City/74/2009(H1N1),5/5/2009,,4
A/Mexico City/75/2009(H1N1),5/5/2009,,4
A/Mexico City/76/2009(H1N1),5/5/2009,,35
A/Mexico City/77/2009(H1N1),5/5/2009,,7
A/Mexico City/78/2009(H1N1),5/5/2009,,8
A/Mexico City/79/2009(H1N1),5/5/2009,,19
A/Mexico City/8/2009(H1N1),1/5/2009,,23
A/Mexico City/80/2009(H1N1),5/5/2009,,13
A/Mexico City/81/2009(H1N1),5/5/2009,,11
A/Mexico City/82/2009(H1N1),5/5/2009,,6
A/Mexico City/83/2009(H1N1),1/5/2009,,18
A/Mexico City/84/2009(H1N1),1/5/2009,,21
A/Mexico City/85/2009(H1N1),2/5/2009,,51
A/Mexico City/86/2009(H1N1),2/5/2009,,51
A/Mexico City/87/2009(H1N1),2/5/2009,,61
A/Mexico City/88/2009(H1N1),2/5/2009,,19
A/Mexico City/89/2009(H1N1),2/5/2009,,10
A/Mexico City/9/2009(H1N1),1/5/2009,,31
A/Mexico City/90/2009(H1N1),2/5/2009,,48
A/Mexico City/91/2009(H1N1),2/5/2009,,40
A/Mexico City/92/2009(H1N1),2/5/2009,,31
A/Mexico City/93/2009(H1N1),2/5/2009,,30
A/Mexico City/94/2009(H1N1),2/5/2009,,26
A/Mexico City/95/2009(H1N1),2/5/2009,,8
A/Mexico City/96/2009(H1N1),2/5/2009,,26
A/Mexico City/97/2009(H1N1),2/5/2009,,8
A/Mexico City/98/2009(H1N1),2/5/2009,,17
A/Mexico City/99/2009(H1N1),2/5/2009,,2
A/Mexico/3955/2009(H1N1),2/4/2009,F,9
A/Mexico/4108/2009(H1N1),3/4/2009,M,4
A/Mexico/4115/2009(H1N1),7/4/2009,F,50
A/Mexico/4176/2009(H1N1),13/4/2009,M,12
A/Mexico/4269/2009(H1N1),15/4/2009,M,3
A/Mexico/4482/2009(H1N1),14/4/2009,F,29
A/Mexico/4486/2009(H1N1),14/4/2009,M,3
A/Mexico/4502/2009(H1N1),17/4/2009,F,3
A/Mexico/4516/2009(H1N1),25/4/2009,M,41
A/Mexico/4575/2009(H1N1),20/4/2009,F,49
A/Mexico/4593/2009(H1N1),20/4/2009,F,13
A/Mexico/4595/2009(H1N1),20/4/2009,F,8
A/Mexico/4603/2009(H1N1),19/4/2009,F,59
A/Mexico/4604/2009(H1N1),19/4/2009,F,52
A/Mexico/4627/2009(H1N1),20/4/2009,M,3
A/Mexico/4635/2009(H1N1),20/4/2009,F,30
A/Mexico/4646/2009(H1N1),20/4/2009,F,24
A/Mexico/47N/2009(H1N1),25/4/2009,M,5
A/Mexico/InDRE4114/2009(H1N1),2009,,
A/Mexico/InDRE4487/2009(H1N1),14/4/2009,,
A/Michigan/02/2009(H1N1),26/4/2009,F,34
A/Milan/UHSR1/2009(H1N1),21/5/2009,F,24
A/Minas Gerais/65/2009(H1N1),27/4/2009,F,29
A/Minnesota/02/2009(H1N1),27/4/2009,F,28
A/Minnesota/03/2009(H1N1),4/2009,F,
A/Missouri/01/2009(H1N1),27/4/2009,F,
A/Missouri/02/2009(H1N1),1/5/2009,M,24
A/Missouri/03/2009(H1N1),4/5/2009,M,4
A/Monterrey/1/2009(H1N1),7/5/2009,M,
A/Monterrey/2/2009(H1N1),8/5/2009,M,
A/Moscow/01/2009(H1N1),21/5/2009,,
A/Moscow/02/2009(H1N1),26/5/2009,,
A/Moscow/03/2009(H1N1),4-Jun-2009,,
A/Moscow/226/2009(H1N1),2009,,
A/Nanjing/1/2009(H1N1),18-Jun-2009,,
A/Narita/1/2009(H1N1),8/5/2009,,
A/Nebraska/02/2009(H1N1),4/2009,M,48
A/Nebraska/03/2009(H1N1),27/4/2009,F,61
A/Netherlands/602/2009(H1N1),29/4/2009,,
A/Nevada/03/2009(H1N1),26/4/2009,F,2
A/Nevada/05/2009(H1N1),29/4/2009,F,38
A/New Hampshire/02/2009(H1N1),28/4/2009,F,51
A/New Jersey/01/2009(H1N1),4/2009,F,22
A/New Jersey/02/2009(H1N1),4/2009,F,22
A/New Jersey/04/2009(H1N1),4/2009,F,22
A/New Mexico/04/2009(H1N1),26/4/2009,M,18
A/New York/04/2009(H1N1),4/2009,F,17
A/New York/05/2009(H1N1),4/2009,F,14
A/New York/06/2009(H1N1),25/4/2009,F,21
A/New York/08/2009(H1N1),25/4/2009,F,14
A/New York/09/2009(H1N1),25/4/2009,F,17
A/New York/10/2009(H1N1),25/4/2009,F,17
A/New York/11/2009(H1N1),25/4/2009,F,16
A/New York/12/2009(H1N1),25/4/2009,F,17
A/New York/13/2009(H1N1),25/4/2009,F,17
A/New York/14/2009(H1N1),4/2009,F,17
A/New York/15/2009(H1N1),25/4/2009,M,15
A/New York/16/2009(H1N1),24/4/2009,F,17
A/New York/1669/2009(H1N1),26/4/2009,,
A/New York/1682/2009(H1N1),27/4/2009,,
A/New York/17/2009(H1N1),4/2009,F,17
A/New York/18/2009(H1N1),25/4/2009,M,15
A/New York/19/2009(H1N1),25/4/2009,F,14
A/New York/20/2009(H1N1),25/4/2009,F,15
A/New York/21/2009(H1N1),24/4/2009,M,14
A/New York/22/2009(H1N1),24/4/2009,M,14
A/New York/23/2009(H1N1),24/4/2009,F,17
A/New York/24/2009(H1N1),24/4/2009,M,14
A/New York/25/2009(H1N1),24/4/2009,M,15
A/New York/26/2009(H1N1),24/4/2009,F,17
A/New York/27/2009(H1N1),4/2009,M,14
A/New York/28/2009(H1N1),4/2009,F,14
A/New York/30/2009(H1N1),4/2009,F,17
A/New York/3002/2009(H1N1),25/4/2009,,52
A/New York/3007/2009(H1N1),27/4/2009,,33
A/New York/3008/2009(H1N1),27/4/2009,,50
A/New York/3012/2009(H1N1),27/4/2009,,39
A/New York/3014/2009(H1N1),27/4/2009,,14
A/New York/3049/2009(H1N1),27/4/2009,,15
A/New York/3099/2009(H1N1),29/4/2009,,9
A/New York/31/2009(H1N1),24/4/2009,F,14
A/New York/3100/2009(H1N1),30/4/2009,,11
A/New York/3149/2009(H1N1),2009,,
A/New York/3166/2009(H1N1),26/4/2009,,16
A/New York/3168/2009(H1N1),26/4/2009,,9
A/New York/3169/2009(H1N1),26/4/2009,,15
A/New York/3170/2009(H1N1),2/5/2009,,24
A/New York/3172/2009(H1N1),27/4/2009,,18
A/New York/3173/2009(H1N1),28/4/2009,,19
A/New York/3176/2009(H1N1),26/4/2009,,15
A/New York/3177/2009(H1N1),2/5/2009,,16
A/New York/3178/2009(H1N1),28/4/2009,,12
A/New York/3181/2009(H1N1),28/4/2009,,58
A/New York/3183/2009(H1N1),28/4/2009,,10
A/New York/3184/2009(H1N1),28/4/2009,,16
A/New York/3185/2009(H1N1),29/4/2009,,17
A/New York/3186/2009(H1N1),26/4/2009,,16
A/New York/3187/2009(H1N1),1/5/2009,,15
A/New York/3188/2009(H1N1),28/4/2009,,14
A/New York/3189/2009(H1N1),29/4/2009,,12
A/New York/3190/2009(H1N1),29/4/2009,,13
A/New York/3191/2009(H1N1),25/4/2009,,15
A/New York/3193/2009(H1N1),28/4/2009,,15
A/New York/3194/2009(H1N1),30/4/2009,,9
A/New York/3195/2009(H1N1),28/4/2009,,18
A/New York/3196/2009(H1N1),28/4/2009,,17
A/New York/3199/2009(H1N1),28/4/2009,,15
A/New York/3201/2009(H1N1),2009,,13
A/New York/3202/2009(H1N1),2009,,15
A/New York/3203/2009(H1N1),27/4/2009,,51
A/New York/3204/2009(H1N1),27/4/2009,,18
A/New York/3205/2009(H1N1),26/4/2009,,14
A/New York/3207/2009(H1N1),26/4/2009,,14
A/New York/3209/2009(H1N1),25/4/2009,,17
A/New York/3210/2009(H1N1),24/4/2009,,18
A/New York/3211/2009(H1N1),28/4/2009,,16
A/New York/3214/2009(H1N1),25/4/2009,,14
A/New York/3215/2009(H1N1),25/4/2009,,15
A/New York/3218/2009(H1N1),2009,,10
A/New York/3219/2009(H1N1),,,
A/New York/3220/2009(H1N1),,,14
A/New York/3221/2009(H1N1),,,15
A/New York/3222/2009(H1N1),,,15
A/New York/3223/2009(H1N1),,,16
A/New York/3225/2009(H1N1),27/4/2009,,15
A/New York/3227/2009(H1N1),28/4/2009,,17
A/New York/3230/2009(H1N1),28/4/2009,,
A/New York/3232/2009(H1N1),30/4/2009,,
A/New York/3234/2009(H1N1),28/4/2009,,18
A/New York/3235/2009(H1N1),28/4/2009,,14
A/New York/3236/2009(H1N1),28/4/2009,,11
A/New York/3237/2009(H1N1),28/4/2009,,16
A/New York/3238/2009(H1N1),28/4/2009,,17
A/New York/3239/2009(H1N1),2009,,18
A/New York/3240/2009(H1N1),2009,,5
A/New York/3242/2009(H1N1),2009,,15
A/New York/3243/2009(H1N1),2009,,14
A/New York/3244/2009(H1N1),2009,,14
A/New York/3245/2009(H1N1),2009,,16
A/New York/3246/2009(H1N1),2009,,17
A/New York/3252/2009(H1N1),2009,,15
A/New York/3253/2009(H1N1),2009,,17
A/New York/3255/2009(H1N1),2009,,17
A/New York/3257/2009(H1N1),2009,,15
A/New York/3258/2009(H1N1),2009,,20
A/New York/3259/2009(H1N1),2009,,15
A/New York/3260/2009(H1N1),27/4/2009,,18
A/New York/3261/2009(H1N1),29/4/2009,,
A/New York/3262/2009(H1N1),27/4/2009,,15
A/New York/3263/2009(H1N1),2009,,
A/New York/3264/2009(H1N1),29/4/2009,,
A/New York/3265/2009(H1N1),29/4/2009,,
A/New York/33/2009(H1N1),25/4/2009,F,14
A/New York/3307/2009(H1N1),1/5/2009,,14
A/New York/3313/2009(H1N1),4/5/2009,,13
A/New York/34/2009(H1N1),25/4/2009,F,14
A/New York/35/2009(H1N1),25/4/2009,F,16
A/New York/37/2009(H1N1),25/4/2009,F,17
A/New York/39/2009(H1N1),25/4/2009,F,25
A/Nonthaburi/102/2009(H1N1),6/5/2009,,
A/Nonthaburi/104/2009(H1N1),10/5/2009,,
A/North Carolina/05/2009(H1N1),28/4/2009,F,32
A/North Carolina/06/2009(H1N1),28/4/2009,M,42
A/North Dakota/04/2009(H1N1),11/5/2009,M,49
A/Norway/1168/2009(H1N1),7/5/2009,M,21
A/Norway/1177/2009(H1N1),8/5/2009,F,20
A/Ohio/07/2009(H1N1),24/4/2009,M,9
A/Ohio/09/2009(H1N1),5/5/2009,M,9
A/Ohio/10/2009(H1N1),30/4/2009,F,41
A/Oklahoma/01/2009(H1N1),28/4/2009,F,28
A/Oklahoma/02/2009(H1N1),29/4/2009,F,9
A/Oregon/04/2009(H1N1),27/4/2009,F,58
A/Oregon/05/2009(H1N1),29/4/2009,F,8
A/Oregon/06/2009(H1N1),28/4/2009,M,55
A/Osaka-C/1/2009(H1N1),16/5/2009,,
A/Osaka-C/2/2009(H1N1),17/5/2009,,
A/Osaka/1/2009(H1N1),16/5/2009,,
A/Osaka/2/2009(H1N1),16/5/2009,,
A/Pais Vasco/GP20/2009(H1N1),26/4/2009,,
A/Paris/2573/2009(H1N1),29/4/2009,F,24
A/Paris/2580/2009(H1N1),30/4/2009,F,24
A/Paris/2590/2009(H1N1),30/4/2009,F,24
A/Paris/2591/2009(H1N1),1/5/2009,M,23
A/Paris/2592/2009(H1N1),1/5/2009,M,23
A/Paris/2604/2009(H1N1),5/5/2009,F,24
A/Paris/2629/2009(H1N1),11/5/2009,M,25
A/Pennsylvania/06/2009(H1N1),29/4/2009,M,23
A/Perth/29/2009(H1N1),26/5/2009,,
A/Philippines/2001/2009(H1N1),20/5/2009,F,10
A/Philippines/2003/2009(H1N1),25/5/2009,F,18
A/Philippines/2006/2009(H1N1),25/5/2009,F,18
A/Philippines/2009/2009(H1N1),23/5/2009,M,13
A/Poland/37/2009(H1N1),5/5/2009,F,58
A/Regensburg/Germany/01/2009(H1N1),27/4/2009,M,37
A/Rhode Island/02/2009(H1N1),28/4/2009,M,29
A/Rio de Janeiro/118/2009(H1N1),5/5/2009,M,21
A/Rio de Janeiro/125/2009(H1N1),6/5/2009,M,19
A/Rio de Janeiro/290/2009(H1N1),24/5/2009,F,24
A/Rio de Janeiro/307/2009(H1N1),27/5/2009,F,25
A/Rio de Janeiro/332/2009(H1N1),30/5/2009,M,48
A/Sakai/1/2009(H1N1),2009,,
A/Sakai/2/2009(H1N1),2009,,
A/Santa Catarina/296/2009(H1N1),25/5/2009,F,
A/Sao Paulo/1454/2009(H1N1),29/4/2009,M,26
A/Shandong/1/2009(H1N1),10/5/2009,,
A/Shanghai/1/2009(H1N1),23/5/2009,M,30
A/Shanghai/37T/2009(H1N1),24/5/2009,,
A/Shanghai/60T/2009(H1N1),28/5/2009,,
A/Shanghai/71T/2009(H1N1),31/5/2009,,
A/Shiga/1/2009(H1N1),2009,,
A/Shiga/2/2009(H1N1),2009,,
A/Shiga/3/2009(H1N1),2009,,
A/Sichuan/1/2009(H1N1),10/5/2009,,
A/South Australia/2001/2009(H1N1),5/2009,,15
A/South Carolina/09/2009(H1N1),26/4/2009,M,19
A/South Carolina/10/2009(H1N1),26/4/2009,F,17
A/South Carolina/11/2009(H1N1),26/4/2009,F,17
A/South Dakota/04/2009(H1N1),5/5/2009,M,4
A/South Dakota/05/2009(H1N1),30/4/2009,M,26
A/Stockholm/28/2009(H1N1),30/4/2009,F,49
A/Stockholm/29/2009(H1N1),8/5/2009,M,25
A/Switzerland/01/2009(H1N1),28/4/2009,,
A/Tennessee/05/2009(H1N1),28/4/2009,M,13
A/Tennessee/1-560/2009(H1N1),1/5/2009,,
A/Texas/04/2009(H1N1),14/4/2009,M,16
A/Texas/05/2009(H1N1),15/4/2009,M,16
A/Texas/06/2009(H1N1),23/4/2009,M,18
A/Texas/07/2009(H1N1),25/4/2009,M,24
A/Texas/08/2009(H1N1),24/4/2009,,7
A/Texas/09/2009(H1N1),25/4/2009,F,3
A/Texas/10/2009(H1N1),23/4/2009,F,6
A/Texas/11/2009(H1N1),23/4/2009,M,9
A/Texas/12/2009(H1N1),24/4/2009,F,12
A/Texas/15/2009(H1N1),15/4/2009,,1
A/Texas/17/2009(H1N1),24/4/2009,M,12
A/Texas/19/2009(H1N1),26/4/2009,F,33
A/Texas/22/2009(H1N1),26/4/2009,,
A/Texas/23/2009(H1N1),27/4/2009,,14
A/Texas/28/2009(H1N1),29/4/2009,M,43
A/Thailand/104/2009(H1N1),6/5/2009,,
A/Tokushima/1/2009(H1N1),2009,,
A/Toronto/3141/2009(H1N1),4/2009,M,28
A/Toronto/3145/2009(H1N1),4/2009,F,22
A/Toronto/3146/2009(H1N1),4/2009,F,22
A/Toronto/3170/2009(H1N1),4/2009,F,22
A/Toronto/3178/2009(H1N1),4/2009,M,29
A/Toronto/3181/2009(H1N1),4/2009,F,24
A/Toronto/3184/2009(H1N1),4/2009,F,22
A/Valencia/GP4/2009(H1N1),26/4/2009,,
A/Vermont/03/2009(H1N1),4/5/2009,F,35
A/Victoria/2001/2009(H1N1),19/5/2009,M,9
A/Victoria/2004/2009(H1N1),21/5/2009,M,25
A/Virginia/04/2009(H1N1),27/4/2009,F,25
A/Washington/07/2009(H1N1),28/4/2009,F,22
A/Washington/09/2009(H1N1),28/4/2009,M,11
A/Washington/11/2009(H1N1),26/4/2009,M,42
A/Washington/12/2009(H1N1),27/4/2009,M,8
A/Wisconsin/08/2009(H1N1),27/4/2009,M,10
A/Wisconsin/09/2009(H1N1),27/4/2009,F,40
A/Wisconsin/10/2009(H1N1),4/5/2009,F,13
A/Wisconsin/11/2009(H1N1),4/5/2009,M,58
A/Yokohama/1/2009(H1N1),2009,,
A/Yuelu/314/2009(H1N1),11/3/2009,,
A/Zhejiang/1/2009(H1N1),23/5/2009,M,20
A/Zhejiang/2/2009(H1N1),31/5/2009,F,39

gsgs · Aug 18, 2010

Re: swine flu sequences (thread from h5n1experts)

-----------posted:2009/06/25 , updated:2009/06/26----------------

CDC- variants: (from 22.May)
http://www.sciencemag.org/cgi/content/full/1176225/DC1

they only look at antigenic differences (amino-acids)
while I think that we should look at genetic differences (nucleotides)
to determine substrains=variants

my substrains

Code:

name (markers) [#30.May,#12.June]   marker1(segment),...
----------------------------------------------------------------
early Mex (0)[6,6]
   Northern (2)[8,9]         A1741C(3),C1118T(5)
      swine (6)[6,6]         A0588G(3),A1741C(3),C0022A(4),C1118T(5),A0283G(6),C0738A(8)
      Jersey (6)[6,8]        G0799A(1),A1741C(3),G0687T(4),A0877G(4),G1173A(4),C1118T(5)
      Hamburg (3)[10,12]     A1577G(1),A1741C(3),C1118T(5)
   Texas (7)[9,9]            G1308A(1),T0450C(2),A0561C(3),G1173A(4),G1563A(4),G0522A(7),A0775G(8)
   early US (3)[4,5]         A1218G(1),G1986T(3),A1044G(6) 
   airplane (1)[6,7]         G0546A(1)
     England (7)[7,9]        G0546A(1),A2030G(1),A0300G(2),A1058G(2),A0008G(3),C0145A(4),C0132T(5)
   Korea (3)[1,2]            G0298A(5),G1143A(5),G0316A(6)
      Japan (9)[9,9]         T1711C(1),G1945A(1),G0636A(2),T2000C(2),G0936A(3),G0298A(5),G1143A(5),G0316A(6),G0659A(8)
      pre-Cancun (5)[11,14]  C1408T(4),G0298A(5),G1143A(5),G0316A(6),A0742G(6)
         Cancun (11)[73,111] G2163A(1),T0658A(4),C1408T(4),G0298A(5),G1143A(5),G1248A(5),G0316A(6),A0742G(6),G0492A(7),G0600A(7),A0367G(8)

their S224P in PA is my T670C(3)
M582L in PA is A1741C(3)
S91P in HA is T298C(4)
S206T in HA is T658A(4)
V323I in HA is G1012A(4)
V100I in NP is G298A(5)
T373I in NP is C1118T(5)
V106I in NA is G316A(6)
N247D in NA is A742G(6)

so their variant i is my "early Mex"
their variant ii is my "Northern"
their varint iii is my "pre-Cancun"
their variant iv is my "Cancun"
their variant v is my "early US" (they don't include Texas/15 here)

gsgs · Aug 18, 2010

Re: swine flu sequences (thread from h5n1experts)

-----------------posted:2009/06/26-----------------
current viruses (~20.June)

Code:

8,airplane
113,Cancun
89,early Mex
8,early US
21,England
11,Hamburg
13,Japan
19,Jersey
17,Korea
29,Northern
68,pre-Cancun
12,swine
12,Texas
--------------
420


subgroup,# matching markers,out of #, # nucleotides available , virus name
airplane 1  1  10987    >A/Paris/2573/2009/04/29
airplane 1  1  11999    >A/Paris/2590/2009/04/30
airplane 1  1  13133    >A/Beijing/4/2009/05/23
airplane 1  1  13133    >A/Sichuan/1/2009/05/10
airplane 1  1  13139    >A/Beijing/01/2009/05/16
airplane 1  1  13139    >A/Narita/1/2009/05/08
airplane 1  1  5290     >A/Alabama/02/2009/04/27
airplane 1  1  8714     >A/Arizona/01/2009/04/22

Cancun 1  11  2301      >A/Nevada/03/2009/04/26
Cancun 1  11  3136      >A/Massachusetts/07/2009/04/26
Cancun 1  11  470       >A/Switzerland/01/2009/04/28
Cancun 1  11  555       >A/Athens/761/2009/05/26
Cancun 1  11  565       >A/Toronto/3141/2009/04/
Cancun 1  11  565       >A/Toronto/3146/2009/04/
Cancun 1  11  582       >A/Toronto/3145/2009/04/
Cancun 1  11  626       >A/Ankara/1/2009//
Cancun 10  11  12394    >A/Ohio/07/2009/04/24
Cancun 10  11  12399    >A/NY/20/2009/04/25
Cancun 11  11  10868    >A/NY/31/2009/04/24
Cancun 11  11  10868    >A/NY/3215/2009/04/25
Cancun 11  11  10991    >A/Georgia/01/2009/04/27
Cancun 11  11  10991    >A/NY/22/2009/04/24
Cancun 11  11  12931    >A/Italy/49/2009/05/27
Cancun 11  11  13033    >A/NY/3238/2009/04/28
Cancun 11  11  13058    >A/Bayern/63/2009//
Cancun 11  11  13124    >A/NY/3049/2009/04/27
Cancun 11  11  13124    >A/NY/3222/2009//
Cancun 11  11  13124    >A/NY/3244/2009//
Cancun 11  11  13127    >A/NY/3189/2009/04/29
Cancun 11  11  13127    >A/NY/3223/2009//
Cancun 11  11  13127    >A/NY/3225/2009/04/27
Cancun 11  11  13127    >A/NY/3242/2009//
Cancun 11  11  13127    >A/NY/3246/2009//
Cancun 11  11  13130    >A/NY/3007/2009/04/27
Cancun 11  11  13130    >A/NY/3008/2009/04/27
Cancun 11  11  13130    >A/NY/3012/2009/04/27
Cancun 11  11  13130    >A/NY/3014/2009/04/27
Cancun 11  11  13130    >A/NY/3191/2009/04/25
Cancun 11  11  13130    >A/NY/3219/2009//
Cancun 11  11  13130    >A/NY/3220/2009//
Cancun 11  11  13130    >A/NY/3234/2009/04/28
Cancun 11  11  13130    >A/NY/3237/2009/04/28
Cancun 11  11  13130    >A/NY/3258/2009//
Cancun 11  11  13130    >A/NY/3260/2009/04/27
Cancun 11  11  13130    >A/NY/3261/2009/04/29
Cancun 11  11  13133    >A/CA/14/2009/04/25
Cancun 11  11  13133    >A/Fujian/1/2009/05/22
Cancun 11  11  13133    >A/Fujian/1/2009/05/22
Cancun 11  11  13133    >A/Guangdong/02/2009/05/27
Cancun 11  11  13133    >A/Guangdong/05/2009/05/29
Cancun 11  11  13133    >A/NY/3202/2009//
Cancun 11  11  13133    >A/NY/3205/2009/04/26
Cancun 11  11  13133    >A/NY/3218/2009//
Cancun 11  11  13133    >A/NY/3221/2009//
Cancun 11  11  13133    >A/NY/3232/2009/04/30
Cancun 11  11  13133    >A/NY/3239/2009//
Cancun 11  11  13133    >A/NY/3262/2009/04/27
Cancun 11  11  13133    >A/Shanghai/37T/2009/05/24
Cancun 11  11  13133    >A/Zhejiang/1/2009/05/23
Cancun 11  11  13135    >A/NY/3185/2009/04/29
Cancun 11  11  13136    >A/NY/3149/2009//
Cancun 11  11  13136    >A/NY/3169/2009/04/26
Cancun 11  11  13136    >A/NY/3187/2009/05/01
Cancun 11  11  13136    >A/NY/3190/2009/04/29
Cancun 11  11  13136    >A/NY/3207/2009/04/26
Cancun 11  11  13136    >A/NY/3214/2009/04/25
Cancun 11  11  13136    >A/NY/3253/2009//
Cancun 11  11  13136    >A/NY/3255/2009//
Cancun 11  11  13136    >A/NY/3259/2009//
Cancun 11  11  13136    >A/NY/3263/2009//
Cancun 11  11  13136    >A/NY/3264/2009/04/29
Cancun 11  11  13139    >A/Canada-AB/RV1532/2009//
Cancun 11  11  13139    >A/Canada-ON/RV1527/2009/04/24
Cancun 11  11  13139    >A/Canada-ON/RV1529/2009//
Cancun 11  11  13139    >A/Moscow/01/2009/05/21
Cancun 11  11  13139    >A/Moscow/02/2009/05/26
Cancun 11  11  13139    >A/NY/06/2009/04/25
Cancun 11  11  13139    >A/NY/10/2009/04/25
Cancun 11  11  13139    >A/NY/11/2009/04/25
Cancun 11  11  13139    >A/NY/18/2009/04/25
Cancun 11  11  13139    >A/NY/23/2009/04/24
Cancun 11  11  13139    >A/NY/3002/2009/04/25
Cancun 11  11  13139    >A/NY/3166/2009/04/26
Cancun 11  11  13139    >A/NY/3168/2009/04/26
Cancun 11  11  13139    >A/NY/3170/2009/05/02
Cancun 11  11  13139    >A/NY/3172/2009/04/27
Cancun 11  11  13139    >A/NY/3173/2009/04/28
Cancun 11  11  13139    >A/NY/3176/2009/04/26
Cancun 11  11  13139    >A/NY/3184/2009/04/28
Cancun 11  11  13139    >A/NY/3186/2009/04/26
Cancun 11  11  13139    >A/NY/3188/2009/04/28
Cancun 11  11  13139    >A/NY/3193/2009/04/28
Cancun 11  11  13139    >A/NY/3194/2009/04/30
Cancun 11  11  13139    >A/NY/3195/2009/04/28
Cancun 11  11  13139    >A/NY/3196/2009/04/28
Cancun 11  11  13139    >A/NY/3199/2009/04/28
Cancun 11  11  13139    >A/NY/3201/2009//
Cancun 11  11  13139    >A/NY/3203/2009/04/27
Cancun 11  11  13139    >A/NY/3204/2009/04/27
Cancun 11  11  13139    >A/NY/3209/2009/04/25
Cancun 11  11  13139    >A/NY/3210/2009/04/24
Cancun 11  11  13139    >A/NY/3211/2009/04/28
Cancun 11  11  13139    >A/NY/3227/2009/04/28
Cancun 11  11  13139    >A/NY/3230/2009/04/28
Cancun 11  11  13139    >A/NY/3235/2009/04/28
Cancun 11  11  13139    >A/NY/3236/2009/04/28
Cancun 11  11  13139    >A/NY/3243/2009//
Cancun 11  11  13139    >A/NY/3245/2009//
Cancun 11  11  13139    >A/NY/3252/2009//
Cancun 11  11  13139    >A/NY/3257/2009//
Cancun 11  11  13139    >A/NY/3265/2009/04/29
Cancun 11  11  13139    >A/NY/3313/2009/05/04
Cancun 11  11  13139    >A/Zhejiang/2/2009/05/31
Cancun 2  11  1584      >A/Athens/793/2009/05/28
Cancun 6  11  8090      >A/NY/25/2009/04/24
Cancun 7  11  10028     >A/Shanghai/60T/2009/05/08
Cancun 7  11  10753     >A/Nebraska/03/2009/04/27
Cancun 7  11  4195      >A/NY/33/2009/04/25
Cancun 7  11  4195      >A/NY/39/2009/04/25
Cancun 7  11  6466      >A/Wash.DC/01/2009/04/27
Cancun 8  11  9497      >A/Zhejiang/2/2009/05/31

early Mex 0  0  1003    >A/Auckland/2/2009/04/24
early Mex 0  0  1003    >A/Mexico/4115-b/2009/04/07
early Mex 0  0  1003    >A/South Carolina/11/2009/04/26
early Mex 0  0  13016   >A/Israel/644/2009/04/
early Mex 0  0  13130   >A/NY/3178/2009/04/28
early Mex 0  0  13139   >A/******/index/2009-02-01
early Mex 0  0  13139   >A/Mexico/4115/2009/04/07
early Mex 0  0  13139   >A/Mexico/InDRE4114/2009//
early Mex 0  0  13139   >A/Mexico/InDRE4487/2009/04/14
early Mex 0  0  1638    >A/Athens/820/2009/05/31
early Mex 0  0  166     >A/Israel/G-640/2009/04/26
early Mex 0  0  166     >A/Israel/G-645/2009/04/27
early Mex 0  0  166     >A/Israel/MF-119/2009/05/02
early Mex 0  0  166     >A/Israel/MF-70/2009/05/01
early Mex 0  0  1708    >A/Philippines/06/2009/05/25
early Mex 0  0  1722    >A/HK/01/2009/04/30
early Mex 0  0  2095    >A/Catalonia/49/2009/04/27
early Mex 0  0  2132    >A/Catalonia/4/2009/04/26
early Mex 0  0  2135    >A/Catalonia/10/2009/04/26
early Mex 0  0  2136    >A/Catalonia/67/2009/04/29
early Mex 0  0  2137    >A/Catalonia/3/2009/04/26
early Mex 0  0  2137    >A/Catalonia/43/2009/04/27
early Mex 0  0  2137    >A/Catalonia/50/2009/04/27
early Mex 0  0  2138    >A/Catalonia/44/2009/04/27
early Mex 0  0  2138    >A/Catalonia/63/2009/04/28
early Mex 0  0  2141    >A/Catalonia/8/2009/04/26
early Mex 0  0  2142    >A/Catalonia/61/2009/04/28
early Mex 0  0  2144    >A/Catalonia/14/2009/04/26
early Mex 0  0  2148    >A/Catalonia/82/2009/04/29
early Mex 0  0  2152    >A/Catalonia/25/2009/04/27
early Mex 0  0  2163    >A/Catalonia/79/2009/04/29
early Mex 0  0  2223    >A/Catalonia/48/2009/04/
early Mex 0  0  2276    >A/Monterrey/1/2009/05/07
early Mex 0  0  228     >A/Italy/02/2009//
early Mex 0  0  2301    >A/Nebraska/02/2009/04/01
early Mex 0  0  235     >A/Italy/01/2009/04/28
early Mex 0  0  2359    >A/Arizona/07/2009/05/07
early Mex 0  0  253     >A/Changsha/01/2009/05/24
early Mex 0  0  2563    >A/Kentucky/05/2009/04/30
early Mex 0  0  265     >A/Italy/03/2009/05/03
early Mex 0  0  2701    >A/Mexico/4646/2009/04/20
early Mex 0  0  2701    >A/Oregon/05/2009/04/29
early Mex 0  0  294     >A/Italy/09/2009/05/08
early Mex 0  0  2970    >A/Catalonia/128/2009/05/01
early Mex 0  0  303     >A/Italy/04/2009/05/03
early Mex 0  0  303     >A/Italy/08/2009/05/05
early Mex 0  0  303     >A/Italy/11/2009/05/20
early Mex 0  0  303     >A/Italy/12/2009/05/20
early Mex 0  0  3101    >A/Perth/29/2009/05/26
early Mex 0  0  3128    >A/Netherlands/602/2009/04/29
early Mex 0  0  3129    >A/Mexico/4176/2009/04/13
early Mex 0  0  3129    >A/Mexico/4269/2009/04/15
early Mex 0  0  3167    >A/Regensburg/GER/01/2009/04/27
early Mex 0  0  330     >A/Bogota/224/2009/04/25
early Mex 0  0  330     >A/Colombia/213/2009/04/30
early Mex 0  0  330     >A/Colombia/450/2009//
early Mex 0  0  3474    >A/Stockholm/28/2009/04/30
early Mex 0  0  3638    >A/Catalonia/127/2009/05/01
early Mex 0  0  3657    >A/Catalonia/53/2009/05/
early Mex 0  0  3674    >A/Catalonia/117/2009/05/01
early Mex 0  0  3684    >A/Catalonia/186/2009/05/
early Mex 0  0  3685    >A/Catalonia/33/2009/04/27
early Mex 0  0  3703    >A/Catalonia/122/2009/05/01
early Mex 0  0  3705    >A/Catalonia/88/2009/04/30
early Mex 0  0  384     >A/Monterrey/2/2009/05/08
early Mex 0  0  4056    >A/Christchurch/2/2009/04/29
early Mex 0  0  4108    >A/Arizona/03/2009/04/26
early Mex 0  0  4108    >A/Arizona/04/2009/04/27
early Mex 0  0  4195    >A/North Carolina/06/2009/04/28
early Mex 0  0  4195    >A/Oregon/06/2009/04/28
early Mex 0  0  484     >A/Toronto/3184/2009/04/
early Mex 0  0  4888    >A/Lisboa/26/2009/04/
early Mex 0  0  4911    >A/Denmark/513/2009/04/29
early Mex 0  0  493     >A/Toronto/3181/2009/04/
early Mex 0  0  499     >A/Toronto/3170/2009/04/
early Mex 0  0  512     >A/Toronto/3178/2009/04/
early Mex 0  0  538     >A/Paris/2604/2009/05/05
early Mex 0  0  582     >A/Athens/728/2009/05/18
early Mex 0  0  609     >A/Rio de Janeiro/125/2009/05/06
early Mex 0  0  615     >A/Malbran/017/2009//
early Mex 0  0  637     >A/Rio de Janeiro/118/2009/05/05
early Mex 0  0  643     >A/Minas Gerais/65/2009/04/27
early Mex 0  0  645     >A/Italy/07/2009//
early Mex 0  0  7612    >A/Tennessee/05/2009/04/28
early Mex 0  0  790     >A/Bogota/176/2009/04/27
early Mex 0  0  826     >A/Dublin/01/2009/05/01
early Mex 0  0  865     >A/Pennsylvania/06/2009/04/29
early Mex 0  0  913     >A/Catalonia/93/2009/04/30
early Mex 0  0  937     >A/Italy/19/2009/05/20
early Mex 0  0  960     >A/Colombia/450/2009/05/06

early US 1  3  2888     >A/Catalonia/154/2009/04/
early US 1  3  3400     >A/CA/09/2009/04/15
early US 2  3  11732    >A/CA/08/2009/04/09
early US 3  3  13133    >A/CA/04/2009/04/01
early US 3  3  13139    >A/CA/07/2009/04/09
early US 3  3  13139    >A/Fukuoka-C/1/2009(H1N1)
early US 3  3  13139    >A/NY/3307/2009/05/01
early US 3  3  13139    >A/Texas/15/2009/04/15

England 1  7  1367      >A/Colombia/08/2009/04/25
England 1  7  2351      >A/Chile/9113/2009/05/19
England 1  7  2910      >A/Catalonia/148/2009/04/
England 1  7  301       >A/Italy/02/2009/04/30
England 1  7  3102      >A/Philippines/01/2009/05/20
England 1  7  3338      >A/Missouri/01/2009/04/27
England 1  7  4108      >A/Kaluga/01/2009/05/22
England 1  7  4108      >A/South Carolina/10/2009/04/26
England 1  7  930       >A/Italy/06/2009/05/
England 2  7  3216      >A/South Dakota/05/2009/04/30
England 2  7  4195      >A/Missouri/03/2009/05/04
England 2  7  4901      >A/CastillaLM/GP9/2009/04/26
England 6  7  10985     >A/South Carolina/09/2009/04/26
England 6  7  12953     >A/Norway/1177/2009/05/08
England 6  7  13023     >A/Norway/1168/2009/05/07
England 7  7  11999     >A/Paris/2592/2009/05/01
England 7  7  13135     >A/Paris/2580/2009/04/30
England 7  7  13139     >A/England/195/2009/04/28
England 7  7  13139     >A/NY/3177/2009/05/02
England 7  7  13139     >A/NY/3181/2009/04/28

Hamburg 3  3  12434     >A/Kansas/03/2009/04/24
Hamburg 3  3  13123     >A/Mexico/4486/2009/04/14
Hamburg 3  3  13129     >A/Hamburg/4/2009//
Hamburg 3  3  13133     >A/Guangdong/1/2009/05/17
Hamburg 3  3  13139     >A/Canada-NS/RV1535/2009/04/24
Hamburg 3  3  13139     >A/Canada-NS/RV1536/2009//
Hamburg 3  3  13139     >A/Canada-NS/RV1538/2009//
Hamburg 3  3  13139     >A/Guangdong/1/2009/05/18
Hamburg 3  3  13139     >A/NY/1669/2009/04/26
Hamburg 3  3  13139     >A/NY/3240/2009//
Hamburg 3  3  8482      >A/Washington/09/2009/04/28

Japan 8  9  13139       >A/Amagasaki/1/2009//
Japan 8  9  13139       >A/Amagasaki/2/2009//
Japan 8  9  13139       >A/Himeji/1/2009
Japan 8  9  13139       >A/Hyogo/1/2009/05/17
Japan 8  9  13139       >A/Hyogo/2/2009/05/17
Japan 8  9  13139       >A/Kobe/1/2009//
Japan 8  9  13139       >A/Osaka-C/1/2009/05/16
Japan 8  9  13139       >A/Osaka-C/2/2009/05/17
Japan 8  9  13139       >A/Osaka/1/2009/05/16
Japan 8  9  13139       >A/Osaka/2/2009/05/16
Japan 8  9  13139       >A/Sakai/1/2009
Japan 8  9  13139       >A/Sakai/2/2009
Japan 8  9  13139       >A/Shiga/2/2009//

Jersey 1  6  1722       >A/Mexico/4627/2009/04/20
Jersey 1  6  3129       >A/Mexico/3955/2009/04/02
Jersey 3  6  2701       >A/Wash.DC/03/2009/04/27
Jersey 3  6  3129       >A/Delaware/05/2009/04/28
Jersey 3  6  3981       >A/Stockholm/29/2009/05/08
Jersey 3  6  4195       >A/Missouri/02/2009/05/01
Jersey 4  6  3216       >A/Delaware/08/2009/04/28
Jersey 4  6  4195       >A/Delaware/04/2009/04/28
Jersey 4  6  4195       >A/Wash.DC/02/2009/04/29
Jersey 4  6  4623       >A/Delaware/02/2009/04/28
Jersey 4  6  4623       >A/Delaware/03/2009/04/28
Jersey 5  6  7750       >A/New Hampshire/02/2009/04/28
Jersey 6  6  10753      >A/Maryland/05/2009/04/29
Jersey 6  6  10868      >A/New Jersey/04/2009/04/
Jersey 6  6  13127      >A/NY/3099/2009/04/29
Jersey 6  6  13136      >A/NY/3183/2009/04/28
Jersey 6  6  13139      >A/NY/1682/2009/04/27
Jersey 6  6  13139      >A/NY/3100/2009/04/30
Jersey 6  6  9889       >A/New Jersey/02/2009/04/

Korea 2  3  11732       >A/Iowa/04/2009/04/24
Korea 2  3  11997       >A/Paris/2591/2009/05/01
Korea 2  3  13135       >A/Italy/05/2009/05/03
Korea 2  3  13139       >A/Mexico/4603/2009/04/19
Korea 2  3  2497        >A/Mexico/4516/2009/04/25
Korea 2  3  3216        >A/NY/35/2009/04/25
Korea 2  3  3216        >A/NY/37/2009/04/25
Korea 2  3  3216        >A/Wisconsin/11/2009/05/04
Korea 2  3  4057        >A/North Dakota/04/2009/05/11
Korea 2  3  4195        >A/Louisiana/03/2009/05/01
Korea 2  3  4195        >A/Texas/19/2009/04/26
Korea 2  3  4195        >A/Wisconsin/10/2009/05/04
Korea 2  3  5036        >A/Wisconsin/08/2009/04/27
Korea 3  3  11441       >A/NY/15/2009/04/25
Korea 3  3  13133       >A/Korea/01/2009/05/02
Korea 3  3  13133       >A/Shanghai/71T/2009/05/31
Korea 3  3  9451        >A/Nonthaburi/102/2009//

Northern 1  2  10150    >A/Arizona/02/2009/04/26
Northern 1  2  10991    >A/Minnesota/03/2009/04/
Northern 1  2  2497     >A/Nevada/05/2009/04/29
Northern 1  2  3216     >A/Arizona/06/2009/04/28
Northern 1  2  3216     >A/CA/13/2009/04/21
Northern 1  2  3216     >A/Ohio/10/2009/04/30
Northern 1  2  3216     >A/Oklahoma/02/2009/04/29
Northern 1  2  3216     >A/Texas/17/2009/04/24
Northern 1  2  4195     >A/Louisiana/04/2009/04/30
Northern 1  2  4195     >A/Ohio/09/2009/05/05
Northern 1  2  4195     >A/South Dakota/04/2009/05/05
Northern 1  2  4195     >A/Texas/28/2009/04/29
Northern 1  2  4195     >A/Washington/07/2009/04/28
Northern 1  2  4195     >A/Washington/12/2009/04/27
Northern 1  2  4195     >A/Wisconsin/09/2009/04/27
Northern 1  2  4636     >A/Mexico/6882/2009/04/26
Northern 1  2  4900     >A/CastillaLM/GP13/2009/04/26
Northern 1  2  4900     >A/Pais Vasco/GP20/2009/04/26
Northern 1  2  4901     >A/Valencia/GP4/2009/04/26
Northern 1  2  5464     >A/New Mexico/04/2009/04/26
Northern 1  2  7735     >A/Illinois/01/2009/04/24
Northern 1  2  9287     >A/Minnesota/02/2009/04/27
Northern 1  2  9584     >A/Texas/07/2009/04/25
Northern 2  2  12298    >A/Florida/04/2009/04/27
Northern 2  2  13123    >A/Mexico/4108/2009/04/03
Northern 2  2  13133    >A/Paris/2629/2009/05/11
Northern 2  2  13139    >A/Indiana/09/2009/04/22
Northern 2  2  13139    >A/Mexico/47N/2009/04/25
Northern 2  2  9889     >A/Arizona/09/2009/05/19

pre-Cancun 1  5  1139   >A/Mexico/1/2009/05/01
pre-Cancun 1  5  1708   >A/Philippines/03/2009/05/25
pre-Cancun 1  5  1722   >A/Mexico/4502/2009/04/17
pre-Cancun 1  5  1722   >A/Mexico/4595/2009/04/20
pre-Cancun 1  5  1722   >A/Mexico/4635/2009/04/20
pre-Cancun 1  5  1722   >A/Milan/UHSR1/2009/05/21
pre-Cancun 1  5  1722   >A/Moscow/03/2009/06/04
pre-Cancun 1  5  1722   >A/NY/04/2009/04/
pre-Cancun 1  5  1722   >A/NY/05/2009/04/
pre-Cancun 1  5  1722   >A/NY/26/2009/04/24
pre-Cancun 1  5  1722   >A/NY/28/2009/04/
pre-Cancun 1  5  1722   >A/NY/30/2009/04/
pre-Cancun 1  5  1722   >A/NY/34/2009/04/25
pre-Cancun 1  5  1722   >A/Oregon/04/2009/04/27
pre-Cancun 1  5  2701   >A/Sao Paulo/1454/2009/04/29
pre-Cancun 2  5  1139   >A/Mexico/73/2009/05/04
pre-Cancun 2  5  2306   >A/Nonthaburi/102/2009/05/06
pre-Cancun 2  5  2335   >A/Nonthaburi/104/2009/05/10
pre-Cancun 2  5  2351   >A/Chile/8886/2009/05/18
pre-Cancun 2  5  2351   >A/Chile/8947/2009/05/17
pre-Cancun 2  5  2351   >A/Chile/8949/2009/05/18
pre-Cancun 2  5  3129   >A/Mexico/4593/2009/04/20
pre-Cancun 2  5  4068   >A/Auckland/4/2009/04/
pre-Cancun 2  5  859    >A/Dublin/02/2009/05/25
pre-Cancun 3  5  2021   >A/Poland/37/2009/05/05
pre-Cancun 3  5  3100   >A/Istanbul/30/2009/05/14
pre-Cancun 3  5  3101   >A/Darwin/01/2009/05/29
pre-Cancun 3  5  3101   >A/Philippines/2009/2009/05/23
pre-Cancun 3  5  3101   >A/Victoria/04/2009/05/21
pre-Cancun 3  5  3106   >A/Victoria/01/2009/05/19
pre-Cancun 3  5  3129   >A/Mexico/4575/2009/04/20
pre-Cancun 3  5  3129   >A/NY/14/2009/04/
pre-Cancun 3  5  3129   >A/NY/17/2009/04/
pre-Cancun 3  5  3129   >A/NY/27/2009/04/
pre-Cancun 3  5  4020   >A/Auckland/3/2009/04/25
pre-Cancun 3  5  4039   >A/Brisbane/17/2009/05/07
pre-Cancun 3  5  4108   >A/NY/08/2009/04/25
pre-Cancun 3  5  4108   >A/NY/16/2009/04/24
pre-Cancun 3  5  4108   >A/NY/24/2009/04/24
pre-Cancun 3  5  4949   >A/Finland/555/2009/05/28
pre-Cancun 3  5  5400   >A/NY/09/2009/04/25
pre-Cancun 3  5  9497   >A/Texas/23/2009/04/27
pre-Cancun 3  5  9798   >A/Tennessee/1-560/2009/05/01
pre-Cancun 4  5  13133  >A/Guangdong/03/2009/05/29
pre-Cancun 5  5  10011  >A/Mexico/4482/2009/04/14
pre-Cancun 5  5  10862  >A/NY/13/2009/04/25
pre-Cancun 5  5  10862  >A/NY/19/2009/04/25
pre-Cancun 5  5  10868  >A/THA/104/2009/05/06
pre-Cancun 5  5  10991  >A/Rhode Island/02/2009/04/28
pre-Cancun 5  5  12005  >A/Auckland/1/2009/04/25
pre-Cancun 5  5  12160  >A/NY/21/2009/04/24
pre-Cancun 5  5  13133  >A/Beijing/3/2009/05/20
pre-Cancun 5  5  13133  >A/Beijing/501/2009/05/21
pre-Cancun 5  5  13133  >A/Michigan/02/2009/04/26
pre-Cancun 5  5  13133  >A/Shandong/1/2009/05/10
pre-Cancun 5  5  13133  >A/Shanghai/1/2009/05/23
pre-Cancun 5  5  13139  >A/Canada-ON/RV1526/2009//
pre-Cancun 5  5  13139  >A/Mexico/4604/2009/04/19
pre-Cancun 5  5  13139  >A/Nonthaburi/102/2009/05/
pre-Cancun 5  5  13139  >A/Shiga/1/2009
pre-Cancun 5  5  4623   >A/Massachusetts/07/2009/04/25
pre-Cancun 5  5  5464   >A/Vermont/03/2009/05/04
pre-Cancun 5  5  6433   >A/Finland/554/2009/05/26
pre-Cancun 5  5  6441   >A/Finland/553/2009/05/10
pre-Cancun 5  5  6771   >A/New Jersey/01/2009/04/
pre-Cancun 5  5  7741   >A/Virginia/04/2009/04/27
pre-Cancun 5  5  8706   >A/NY/12/2009/04/25
pre-Cancun 5  5  8714   >A/Massachusetts/06/2009/04/26

swine 1  6  1722        >A/CA/12/2009/04/22
swine 1  6  1722        >A/CA/17/2009/04/25
swine 1  6  2693        >A/CA/10/2009/04/08
swine 1  6  2701        >A/Washington/11/2009/04/26
swine 2  6  3129        >A/CA/11/2009/04/24
swine 2  6  4108        >A/Colorado/04/2009/04/26
swine 3  6  6900        >A/Idaho/02/2009/04/28
swine 4  6  11319       >A/Colorado/03/2009/04/27
swine 4  6  7729        >A/Nebraska/02/2009/04/
swine 5  6  12298       >A/CA/05/2009/03/30
swine 6  6  13139       >A/CA/06/2009/04/16
swine 6  6  13139       >A/Sw/Alberta/OTH-33-8/2009//

Texas 2  7  3216        >A/Texas/10/2009/04/23
Texas 3  7  2701        >A/Texas/12/2009/04/24
Texas 3  7  4195        >A/Texas/11/2009/04/23
Texas 4  7  6334        >A/Oklahoma/01/2009/04/28
Texas 5  7  10012       >A/Kansas/02/2009/04/24
Texas 5  7  11319       >A/North Carolina/05/2009/04/28
Texas 5  7  8714        >A/Texas/22/2009/04/26
Texas 5  7  8720        >A/Texas/06/2009/04/23
Texas 7  7  13129       >A/Texas/04/2009/04/14
Texas 7  7  13132       >A/Texas/05/2009/04/15
Texas 7  7  13133       >A/Texas/09/2009/04/25
Texas 7  7  13139       >A/Texas/08/2009/04/24

gsgs · Aug 18, 2010

Re: swine flu sequences (thread from h5n1experts)

-------------posted:2009/06/27 , last edited:2009/06/29------------

genoms from Ney York (27.June)

A :early Mex
A,13130, 0000000000000 00 >A/NY/3178/2009/04/28/
A,13139, 0000000000000 00 >A/******/index/2009-02-01

B :Northern

C :swine

D :Jersey
D,13136, 0226210000000 66 >A/NY/3183/2009/04/28/
D,13139, 0226210000000 66 >A/NY/1682/2009/04/27/
D,13139, 0226210000000 66 >A/NY/3100/2009/04/30/

E :Hamburg
E,13139, 0222300000000 33 >A/NY/1669/2009/04/26/
E,13139, 0222300000000 33 >A/NY/3240/2009///
E,13139, 0222300000000 33 >A/NY/3323/2009/05/06/

F :Texas

G :early US
G,13139, 0000003000000 33 >A/NY/3307/2009/05/01/

H :airplane

I :England
I,13139, 0000000170000 77 >A/NY/3177/2009/05/02/
I,13139, 0000000170000 77 >A/NY/3181/2009/04/28/

J :Korea

K :Japan

L

re-Cancun
L,13139, 0000000003355 55 >A/NY/3337/2009/05/04/
L,13139, 0000000003355 55 >A/NY/3348/2009/04/28/
L,13139, 0000000003355 55 >A/NY/3351/2009/05/06/
L,13139, 0000000003355 55 >A/NY/3352/2009/05/06/

M :Cancun
M,13116, 000000000335; ;; >A/NY/20/2009/04/25/
M,13127, 000000000335; ;; >A/NY/3189/2009/04/29/
M,13130, 000000000335; ;; >A/NY/3191/2009/04/25/
M,13130, 000000000335; ;; >A/NY/3258/2009///
M,13130, 000000000335; ;; >A/NY/3261/2009/04/29/
M,13132, 000000000335; ;; >A/NY/3262/2009/04/27/
M,13133, 000000000335; ;; >A/NY/3202/2009///
M,13133, 000000000335; ;; >A/NY/3205/2009/04/26/
M,13133, 000000000335; ;; >A/NY/3218/2009///
M,13133, 000000000335; ;; >A/NY/3232/2009/04/30/
M,13135, 000000000335; ;; >A/NY/3263/2009///
M,13136, 000000000335; ;; >A/NY/3149/2009///
M,13136, 000000000335; ;; >A/NY/3169/2009/04/26/
M,13136, 000000000335; ;; >A/NY/3185/2009/04/29/
M,13136, 000000000335; ;; >A/NY/3187/2009/05/01/
M,13136, 000000000335; ;; >A/NY/3190/2009/04/29/
M,13136, 000000000335; ;; >A/NY/3207/2009/04/26/
M,13136, 000000000335; ;; >A/NY/3214/2009/04/25/
M,13136, 000000000335; ;; >A/NY/3253/2009///
M,13136, 000000000335; ;; >A/NY/3255/2009///
M,13136, 000000000335; ;; >A/NY/3259/2009///
M,13136, 000000000335; ;; >A/NY/3264/2009/04/29/
M,13137, 000000000335; ;; >A/NY/3247/2009/04/29/
M,13138, 000000000335; ;; >A/NY/3245/2009///
M,13139, 000000000335; ;; >A/Cancun/Index/2009-04-15
M,13139, 000000000335; ;; >A/NY/06/2009/04/25/
M,13139, 000000000335; ;; >A/NY/10/2009/04/25/
M,13139, 000000000335; ;; >A/NY/11/2009/04/25/
M,13139, 000000000335; ;; >A/NY/18/2009/04/25/
M,13139, 000000000335; ;; >A/NY/23/2009/04/24/
M,13139, 000000000335; ;; >A/NY/3002/2009/04/25/
M,13139, 000000000335; ;; >A/NY/3166/2009/04/26/
M,13139, 000000000335; ;; >A/NY/3168/2009/04/26/
M,13139, 000000000335; ;; >A/NY/3170/2009/05/02/
M,13139, 000000000335; ;; >A/NY/3172/2009/04/27/
M,13139, 000000000335; ;; >A/NY/3173/2009/04/28/
M,13139, 000000000335; ;; >A/NY/3176/2009/04/26/
M,13139, 000000000335; ;; >A/NY/3184/2009/04/28/
M,13139, 000000000335; ;; >A/NY/3186/2009/04/26/
M,13139, 000000000335; ;; >A/NY/3188/2009/04/28/
M,13139, 000000000335; ;; >A/NY/3193/2009/04/28/
M,13139, 000000000335; ;; >A/NY/3194/2009/04/30/
M,13139, 000000000335; ;; >A/NY/3195/2009/04/28/
M,13139, 000000000335; ;; >A/NY/3196/2009/04/28/
M,13139, 000000000335; ;; >A/NY/3199/2009/04/28/
M,13139, 000000000335; ;; >A/NY/3201/2009///
M,13139, 000000000335; ;; >A/NY/3203/2009/04/27/
M,13139, 000000000335; ;; >A/NY/3204/2009/04/27/
M,13139, 000000000335; ;; >A/NY/3206/2009/04/26/
M,13139, 000000000335; ;; >A/NY/3209/2009/04/25/
M,13139, 000000000335; ;; >A/NY/3210/2009/04/24/
M,13139, 000000000335; ;; >A/NY/3211/2009/04/28/
M,13139, 000000000335; ;; >A/NY/3227/2009/04/28/
M,13139, 000000000335; ;; >A/NY/3230/2009/04/28/
M,13139, 000000000335; ;; >A/NY/3235/2009/04/28/
M,13139, 000000000335; ;; >A/NY/3236/2009/04/28/
M,13139, 000000000335; ;; >A/NY/3243/2009///
M,13139, 000000000335; ;; >A/NY/3252/2009///
M,13139, 000000000335; ;; >A/NY/3257/2009///
M,13139, 000000000335; ;; >A/NY/3260/2009/04/27/
M,13139, 000000000335; ;; >A/NY/3265/2009/04/29/
M,13139, 000000000335; ;; >A/NY/3313/2009/05/04/
M,13139, 000000000335; ;; >A/NY/3354/2009/05/08/
M,13139, 000000000335; ;; >A/NY/3408/2009/05/02/
M,13139, 000000000335; ;; >A/NY/3413/2009/05/11/
M,13139, 000000000335; ;; >A/NY/3463/2009/05/14/
M,13139, 000000000335; ;; >A/NY/3468/2009/05/17/
M,13139, 000000000335; ;; >A/NY/3532/2009/05/16/

gsgs · Aug 18, 2010

Re: swine flu sequences (thread from h5n1experts)

--------posted:2009/06/19 , last edited:2009/11/30---------------
630 viruses, ~27.June with gender,age

Code:

name (markers) [#30.May,#12.June]   marker1(segment),...
----------------------------------------------------------------
A early Mex (0)[6,6]
B    Northern (2)[8,9]         A1741C(3),C1118T(5)
C       swine (6)[6,6]         A0588G(3),A1741C(3),C0022A(4),C1118T(5),A0283G(6),C0738A(8)
D       Jersey (6)[6,8]        G0799A(1),A1741C(3),G0687T(4),A0877G(4),G1173A(4),C1118T(5)
E       Hamburg (3)[10,12]     A1577G(1),A1741C(3),C1118T(5)
F    Texas (7)[9,9]            G1308A(1),T0450C(2),A0561C(3),G1173A(4),G1563A(4),G0522A(7),A0775G(8)
G    early US (3)[4,5]         A1218G(1),G1986T(3),A1044G(6) 
H    airplane (1)[6,7]         G0546A(1)
I      England (7)[7,9]        G0546A(1),A2030G(1),A0300G(2),A1058G(2),A0008G(3),C0145A(4),C0132T(5)
J    Korea (3)[1,2]            G0298A(5),G1143A(5),G0316A(6)
K       Japan (9)[9,9]         T1711C(1),G1945A(1),G0636A(2),T2000C(2),G0936A(3),G0298A(5),G1143A(5),G0316A(6),G0659A(8)
L       pre-Cancun (5)[11,14]  C1408T(4),G0298A(5),G1143A(5),G0316A(6),A0742G(6)
M          Cancun (11)[73,111] G2163A(1),T0658A(4),C1408T(4),G0298A(5),G1143A(5),G1248A(5),G0316A(6),A0742G(6),G0492A(7),G0600A(7),A0367G(8)


enumeration by nucleotides in the coding regions, 
H1N1-enumeration (without the 3bp-deletion in HA)


A :early Mex
B :Northern
C :swine
D :Jersey
E :Hamburg
F :Texas
G :early US
H :airplane
I :England
J :Korea
K :Japan
L :pre-Cancun
M :Cancun



substrain-code
 ,#nucleotides available in the coding regions
       , #markers specific to the 13 substrains (:=10,;=11)
                        best: #markers found - out of
                            virus-name and date,host-gender,-age
-----------------------------------------------------
A,00253,0000000000000,00,Changsha/01/2009/05/24,,
A,02137,0000000000000,00,Catalonia/50/2009/04/27,,
A,01139,0000000000000,00,Mexico City/36/2009/05/02,,12
A,01139,0000000000000,00,Mexico City/59/2009/05/03,,19
A,00610,0000000000000,00,Bethlehem/CBH-70G6/2009/06/08,,,
A,01139,0000000000000,00,Mexico City/28/2009/05/02,,17
A,02701,0000000000000,00,Mexico/4646/2009/04/20,F,24
A,04195,0000000000000,00,Oregon/06/2009/04/28,M,55
A,03686,0000000000000,00,Catalonia/63/2009/04/28,,
A,03672,0000000000000,00,Catalonia/10/2009/04/26,,
A,02138,0000000000000,00,Catalonia/44/2009/04/27,,
A,03638,0000000000000,00,Catalonia/127/2009/05/01,,
A,03685,0000000000000,00,Catalonia/3/2009/04/26,,
A,00166,0000000000000,00,Israel/G-645/2009/04/27,,
A,03674,0000000000000,00,Catalonia/362/2009/06/16,,
A,00166,0000000000000,00,Israel/MF-70/2009/05/01,,
A,00579,0000000000000,00,Mexico City/80/2009/05/05,,13
A,00579,0000000000000,00,Mexico City/83/2009/05/01,,18
A,00579,0000000000000,00,Mexico City/29/2009/05/02,,13
A,00579,0000000000000,00,Mexico City/3/2009/05/01,,59
A,00579,0000000000000,00,Mexico City/43/2009/05/03,,34
A,07612,0000000000000,00,Tennessee/05/2009/04/28,M,13
A,00579,0000000000000,00,Mexico City/84/2009/05/01,,21
A,00579,0000000000000,00,Mexico City/88/2009/05/02,,19
A,00228,0000000000000,00,Italy/02/2009//,,
A,04108,0000000000000,00,Arizona/04/2009/04/27,F,10
A,00609,0000000000000,00,Rio de Janeiro/125/2009/05/06,M,19
A,00900,0000000000000,00,Catalonia/154/2009/05/02,,
A,02152,0000000000000,00,Catalonia/25/2009/04/27,,
A,01722,0000000000000,00,HK/01/2009/04/30,M,25
A,02970,0000000000000,00,Catalonia/128/2009/05/01,,
A,01003,0000000000000,00,Auckland/2/2009/04/24,M,16
A,00294,0000000000000,00,Italy/09/2009/05/08,M,2
A,00166,0000000000000,00,Israel/G-640/2009/04/26,,
A,13139,0000000000000,00,Mexico/InDRE4114/2009//,,
A,00493,0000000000000,00,Toronto/3181/2009/04/,F,24
A,00960,0000000000000,00,Colombia/450/2009/05/06,,
A,00582,0000000000000,00,Athens/728/2009/05/18,M,19
A,00937,0000000000000,00,Italy/19/2009/05/20,,
A,00484,0000000000000,00,Toronto/3184/2009/04/,F,22
A,01139,0000000000000,00,Mexico City/14/2009/05/01,,9
A,01139,0000000000000,00,Mexico City/52/2009/05/03,,22
A,01139,0000000000000,00,Mexico City/72/2009/05/04,,15
A,01139,0000000000000,00,Mexico City/104/2009/05/04,,46
A,01139,0000000000000,00,Mexico City/30/2009/05/02,,13
A,01139,0000000000000,00,Mexico City/68/2009/05/05,,6
A,01139,0000000000000,00,Mexico City/35/2009/05/02,,7
A,01139,0000000000000,00,Mexico City/51/2009/05/03,,35
A,00615,0000000000000,00,Malbran/017/2009//,,
A,00913,0000000000000,00,Catalonia/93/2009/04/30,,
A,01139,0000000000000,00,Mexico City/2/2009/05/01,,8
A,01139,0000000000000,00,Mexico City/62/2009/05/03,,3
A,00584,0000000000000,00,Mexico City/106/2009/05/05,,8
A,03772,0000000000000,00,Catalonia/48/2009/04/,,
A,00303,0000000000000,00,Italy/04/2009/05/03,,
A,00303,0000000000000,00,Italy/08/2009/05/05,M,69
A,01139,0000000000000,00,Mexico City/34/2009/05/02,,29
A,03685,0000000000000,00,Catalonia/33/2009/04/27,,
A,03674,0000000000000,00,Catalonia/117/2009/05/01,,
A,02142,0000000000000,00,Catalonia/61/2009/04/28,,
A,02132,0000000000000,00,Catalonia/4/2009/04/26,,
A,03657,0000000000000,00,Catalonia/53/2009/05/,,
A,02095,0000000000000,00,Catalonia/49/2009/04/27,,
A,00637,0000000000000,00,Rio de Janeiro/118/2009/05/05,M,21
A,00579,0000000000000,00,Mexico City/101/2009/05/02,,28
A,00579,0000000000000,00,Mexico City/10/2009/05/01,,61
A,03101,0000000000000,00,Perth/29/2009/05/26,,
A,04108,0000000000000,00,Texas/34/2009/05/12,,,
A,00579,0000000000000,00,Mexico City/23/2009/05/02,,45
A,00579,0000000000000,00,Mexico City/19/2009/05/01,,56
A,04056,0000000000000,00,Christchurch/2/2009/04/29,M,
A,13130,0000000000000,00,NY/3178/2009/04/28,,12
A,00579,0000000000000,00,Mexico City/95/2009/05/02,,8
A,00579,0000000000000,00,Mexico City/82/2009/05/05,,6
A,13139,0000000000000,00,Mexico/InDRE4487/2009/04/14,,
A,03167,0000000000000,00,Regensburg/GER/01/2009/04/27,M,37
A,03766,0000000000000,00,Arizona/07/2009/05/07,F,49
A,03474,0000000000000,00,Stockholm/28/2009/04/30,F,49
A,02301,0000000000000,00,Nebraska/02/2009/04/01,M,48
A,00303,0000000000000,00,Italy/12/2009/05/20,F,17
A,00384,0000000000000,00,Monterrey/2/2009/05/08,M,
A,02410,0000000000000,00,Georgia/02/2009/05/04,,,
A,01003,0000000000000,00,South Carolina/11/2009/04/26,F,17
A,00538,0000000000000,00,Paris/2604/2009/05/05,F,24
A,02276,0000000000000,00,Monterrey/1/2009/05/07,M,
A,01139,0000000000000,00,Mexico City/24/2009/05/02,,1
A,02701,0000000000000,00,Oregon/05/2009/04/29,F,8
A,01722,0000000000000,00,CA/04/2009/06/05,M,10
A,01139,0000000000000,00,Mexico City/56/2009/05/03,,5
A,01139,0000000000000,00,Mexico City/21/2009/05/02,,8
A,04195,0000000000000,00,North Carolina/06/2009/04/28,M,42
A,01139,0000000000000,00,Mexico City/32/2009/05/02,,10
A,02410,0000000000000,00,Florida/08/2009/04/29,,,
A,01431,0000000000000,00,Texas/30/2009/05/05,,,
A,00645,0000000000000,00,Italy/07/2009//,,
A,01139,0000000000000,00,Mexico City/7/2009/05/01,,59
A,00584,0000000000000,00,Mexico City/25/2009/05/02,,6 months
A,01139,0000000000000,00,Mexico City/22/2009/05/02,,70
A,00624,0000000000000,00,Athens/988/2009/06/15,,,
A,04911,0000000000000,00,Denmark/513/2009/04/29,,
A,03707,0000000000000,00,Catalonia/79/2009/04/29,,
A,02141,0000000000000,00,Catalonia/8/2009/04/26,,
A,03692,0000000000000,00,Catalonia/82/2009/04/29,,
A,04888,0000000000000,00,Lisboa/26/2009/04/,,
A,03691,0000000000000,00,Catalonia/14/2009/04/26,,
A,03682,0000000000000,00,Catalonia/67/2009/04/29,,
A,03684,0000000000000,00,Catalonia/186/2009/05/,,
A,00579,0000000000000,00,Mexico City/102/2009/05/02,,23
A,01139,0000000000000,00,Mexico City/12/2009/05/01,,5
A,00579,0000000000000,00,Mexico City/89/2009/05/02,,10
A,01003,0000000000000,00,Idaho/03/2009/05/05,,,
A,00579,0000000000000,00,Mexico City/91/2009/05/02,,40
A,00579,0000000000000,00,Mexico City/93/2009/05/02,,30
A,03129,0000000000000,00,Michigan/05/2009/05/05,,,
A,00790,0000000000000,00,Bogota/176/2009/04/27,,
A,00330,0000000000000,00,Colombia/450/2009//,,
A,01003,0000000000000,00,Athens/896/2009/06/09,F,28
A,13016,0000000000000,00,Israel/644/2009/04/,,
A,00330,0000000000000,00,Bogota/224/2009/04/25,,
A,03703,0000000000000,00,Catalonia/122/2009/05/01,,
A,03705,0000000000000,00,Catalonia/88/2009/04/30,,
A,03674,0000000000000,00,Catalonia/43/2009/04/27,,
A,03128,0000000000000,00,Netherlands/602/2009/04/29,,
A,00265,0000000000000,00,Italy/03/2009/05/03,,
A,00418,0000000000000,00,Belfast/1/2009//,,
A,00928,0000000000000,00,Catalonia/148/2009/05/02,,
A,01139,0000000000000,00,Mexico City/27/2009/05/02,,7 months
A,04108,0000000000000,00,Arizona/03/2009/04/26,M,12
A,13139,0000000000000,00,Mexico/4115/2009/04/07,F,50
A,01638,0000000000000,00,Athens/820/2009/05/31,M,30
A,01139,0000000000000,00,Mexico City/103/2009/05/04,,5
A,00826,0000000000000,00,Dublin/01/2009/05/01,,
A,01708,0000000000000,00,Philippines/06/2009/05/25,F,18
A,02410,0000000000000,00,Florida/10/2009/04/30,,,
A,00640,0000000000000,00,Santa Catarina/296/2009/05/25,F,
A,00643,0000000000000,00,Minas Gerais/65/2009/04/27,F,29
A,00235,0000000000000,00,Italy/01/2009/04/28,M,50
A,00914,0000000000000,00,Catalonia/20/2009/04/26,,
A,00330,0000000000000,00,Colombia/213/2009/04/30,,
A,03970,0000000000000,00,Kentucky/05/2009/04/30,M,18
A,00579,0000000000000,00,Mexico City/8/2009/05/01,,23
A,00579,0000000000000,00,Mexico City/85/2009/05/02,,51
A,01722,0000000000000,00,Jiangsu/1/2009/06/13,,
A,00499,0000000000000,00,Toronto/3170/2009/04/,F,22
A,02410,0000000000000,00,Georgia/03/2009/05/04,,,
A,00166,0000000000000,00,Israel/MF-119/2009/05/02,,
A,00303,0000000000000,00,Italy/11/2009/05/20,F,24
A,00512,0000000000000,00,Toronto/3178/2009/04/,M,29
A,13139,0000000000000,00,******/index/2009-02-01,,,
B,04195,0111100000000,12,Washington/12/2009/04/27,M,8
B,13139,0222200000000,22,Indiana/09/2009/04/22,F,19
B,04623,0111100000000,12,Texas/17/2009/04/24,M,12
B,03216,0112110000000,12,Mexico/4627/2009/04/20,M,3
B,13123,0223210000000,22,Mexico/4108/2009/04/03,M,4
B,12298,0222200000000,22,Florida/04/2009/04/27,F,18
B,04195,0121100000000,12,Wisconsin/09/2009/04/27,F,40
B,04900,0111100010000,12,CastillaLM/GP13/2009/04/26,,
B,04636,0111100000000,12,Mexico/6882/2009/04/26,,,
B,07735,0111100000000,12,Illinois/01/2009/04/24,M,27
B,09287,0111100000000,12,Minnesota/02/2009/04/27,F,28
B,10991,0111100000000,12,Minnesota/03/2009/04/,F,
B,10991,0111100000000,12,Texas/07/2009/04/25,M,24
B,05602,0111100000000,12,Texas/28/2009/04/29,M,43
B,10150,0111100000000,12,Arizona/02/2009/04/26,F,11
B,05602,0121100010000,12,Louisiana/04/2009/04/30,F,13
B,13139,0232200010000,22,Mexico/47N/2009/04/25,M,5
B,04623,0111100000000,12,Ohio/10/2009/04/30,F,41
B,05602,0111100000000,12,Ohio/09/2009/05/05,M,9
B,13133,0222200000000,22,Paris/2629/2009/05/11,M,25
B,03766,0111100000000,12,Texas/35/2009/05/08,,,
B,04901,0111100010000,12,Valencia/GP4/2009/04/26,,
B,05464,0111100000000,12,Mexico/4176/2009/04/13,M,12
B,04900,0111100000000,12,Pais Vasco/GP20/2009/04/26,,
B,03338,0121100000000,12,Nevada/05/2009/04/29,F,38
B,04195,0111100000000,12,Washington/07/2009/04/28,F,22
B,05464,0111100000000,12,New Mexico/04/2009/04/26,M,18
B,09883,0222200000000,22,Mexico/4269/2009/04/15,M,3
B,09889,0222200000000,22,Arizona/09/2009/05/19,,,
B,03216,0111100000000,12,Oklahoma/02/2009/04/29,F,9
C,03129,0020000000000,26,CA/17/2009/04/25,M,22
C,11319,0141100000000,46,Colorado/03/2009/04/27,M,44
C,04108,0020000000000,26,Colorado/04/2009/04/26,F,38
C,02701,0010000000000,16,Washington/11/2009/04/26,M,42
C,06900,0131100000000,36,Idaho/02/2009/04/28,F,61
C,02693,0010000000000,16,CA/10/2009/04/08,F,
C,03999,0010000000000,16,CA/18/2009/04/30,,,
C,13139,0262200000000,66,CA/06/2009/04/16,F,41
C,04623,0131100000000,36,Arizona/06/2009/04/28,,,
C,04623,0131100000000,36,CA/13/2009/04/21,,
C,01722,0010000000000,16,CA/12/2009/04/22,,
C,07729,0141100000000,46,Nebraska/02/2009/04/,M,48
C,12298,0252200000000,56,CA/05/2009/03/30,F,9
C,03129,0020000000000,26,CA/11/2009/04/24,M,20
C,05602,0131100000000,36,South Dakota/04/2009/05/05,M,4
C,13139,0262200000000,66,swine/Alberta/OTH-33-8/2009,,,
D,03129,0001010000000,16,Mexico/3955/2009/04/02,F,9
D,04195,0113110000000,36,Missouri/02/2009/05/01,M,24
D,03981,0003010000000,36,Stockholm/29/2009/05/08,M,25
D,04195,0114110000000,46,Wash.DC/02/2009/04/29,F,19
D,09889,0226210000000,66,New Jersey/02/2009/04/,F,22
D,04195,0114110000000,46,Delaware/04/2009/04/28,M,21
D,04623,0114110000000,46,Delaware/03/2009/04/28,F,21
D,10868,0226210000000,66,New Jersey/04/2009/04/,F,22
D,04623,0114110000000,46,Delaware/08/2009/04/28,F,21
D,13139,0226210000000,66,NY/1682/2009/04/27,,
D,13127,0226210000000,66,NY/3099/2009/04/29,,9
D,13139,0226210000000,66,NY/3100/2009/04/30,,11
D,13136,0226210000000,66,NY/3183/2009/04/28,,10
D,03129,0003010000000,36,Delaware/05/2009/04/28,M,20
D,07750,0225210000000,56,New Hampshire/02/2009/04/28,F,51
D,02701,0003010000000,36,Wash.DC/03/2009/04/27,F,19
D,12160,0226210000000,66,Maryland/05/2009/04/29,F,40
D,04623,0114110000000,46,Delaware/02/2009/04/28,F,20
D,04108,0002010000000,26,Florida/09/2009/05/01,,,
E,13139,0222300000000,33,NY/1669/2009/04/26,,
E,13139,0222300000000,33,NY/3323/2009/05/06,,,
E,13129,0222300000000,33,Hamburg/4/2009//,,
E,13139,0222300000000,33,Canada-NS/RV1535/2009/04/24,,
E,13139,0222300000000,33,Canada-NS/RV1536/2009//,,
E,13139,0222300000000,33,Canada-NS/RV1538/2009//,,
E,13133,0222300000000,33,GuangzhouSB/01/2009/05/17,M,59
E,13139,0222300000000,33,GuangzhouSB/01/2009/05/18,M,59
E,13085,0222300000000,33,Washington/14/2009/05/07,,,
E,09889,0222300000000,33,Washington/09/2009/04/28,M,11
E,09055,0222300000000,33,Missouri/04/2009/05/10,,,
E,12434,0222300000000,33,Kansas/03/2009/04/24,F,48
E,13116,0222300000011,33,Mexico/4486/2009/04/14,M,3
E,13139,0222300000000,33,NY/3240/2009//,,5
F,13139,0001070000000,77,Texas/08/2009/04/24,,7
F,13139,0001070000000,77,Texas/05/2009/04/15,M,16
F,08720,0001050000000,57,Texas/06/2009/04/23,M,18
F,05602,0001030000000,37,Texas/11/2009/04/23,M,9
F,05602,0001030000000,37,Texas/10/2009/04/23,F,6
F,13127,0001070000000,77,Texas/04/2009/04/14,M,16
F,02701,0001030000000,37,Texas/12/2009/04/24,F,12
F,06334,0001040000000,47,Oklahoma/01/2009/04/28,F,28
F,11319,0001050000000,57,North Carolina/05/2009/04/28,F,32
F,08714,0001050000000,57,Texas/22/2009/04/26,,
F,10012,0001050000000,57,Kansas/02/2009/04/24,M,54
F,13133,0001070000000,77,Texas/09/2009/04/25,F,3
G,11732,0000002000000,23,CA/08/2009/04/09,F,16
G,13139,0000003000000,33,Texas/15/2009/04/15,,1
G,13139,0000003000000,33,Fukuoka-C/1/2009//,,
G,13133,0000003000000,33,CA/04/2009/04/01,M,10
G,13139,0000003000000,33,CA/07/2009/04/09,M,54
G,03400,0000001000000,13,CA/09/2009/04/15,M,7
G,07612,0000001010000,13,Illinois/04/2009/05/23,,,
G,02888,0000001000000,13,Catalonia/154/2009/04/,,
G,01139,0000001000000,13,Mexico City/33/2009/05/02,,40
G,13139,0000003000000,33,NY/3307/2009/05/01,,14
H,13139,0000000120000,11,Beijing/01/2009/05/16,F,18
H,13133,0000000120000,11,Beijing/01/2009/05/15,F,18
H,11999,0000000110000,11,Paris/2590/2009/04/30,F,24
H,09889,0000000120000,11,Arkansas/03/2009/05/07,,,
H,13133,0000000140000,11,Sichuan/1/2009/05/10,,
H,08714,0000000110000,11,Arizona/01/2009/04/22,M,8
H,13133,0000000120000,11,Beijing/4/2009/05/23,M,46
H,13139,0000000120000,11,Narita/1/2009/05/08,,
H,06697,0000000110000,11,Alabama/02/2009/04/27,F,6
H,10987,0000000110000,11,Paris/2573/2009/04/29,F,24
I,04623,0000000020000,27,South Dakota/05/2009/04/30,M,26
I,02910,0000000010000,17,Catalonia/148/2009/04/,,
I,05602,0000000020000,27,Missouri/03/2009/05/04,M,4
I,10985,0000000160000,67,South Carolina/09/2009/04/26,M,19
I,13139,0000000170000,77,England/195/2009/04/28,,
I,13139,0000000170000,77,NY/3181/2009/04/28,,58
I,13135,0000000170000,77,Paris/2580/2009/04/30,F,24
I,13139,0000000170000,77,NY/3177/2009/05/02,,16
I,04745,0000000010000,17,Missouri/01/2009/04/27,F,
I,13023,0000000160000,67,Norway/1168/2009/05/07,M,21
I,04108,0000000010000,17,Kaluga/01/2009/05/22,,
I,02351,0000000010000,17,Chile/9113/2009/05/19,M,24
I,12953,0000000160000,67,Norway/1177/2009/05/08,F,20
I,00301,0000000010000,17,Italy/02/2009/04/30,,
I,11999,0000000170000,77,Paris/2592/2009/05/01,M,23
I,01367,0000000010000,17,Colombia/08/2009/04/25,,
I,00930,0000000010000,17,Italy/06/2009/05/,,
I,03102,0000000010000,17,Philippines/01/2009/05/20,F,10
I,04901,0000000020000,27,CastillaLM/GP9/2009/04/26,,
I,04108,0000000010000,17,South Carolina/10/2009/04/26,F,17
I,01574,0000000010000,17,Catalonia/317/2009/05/28,,
J,13135,0111100002233,23,Italy/05/2009/05/03,M,45
J,11732,0000000002233,23,Iowa/04/2009/04/24,F,35
J,05036,0000000002233,23,Wisconsin/08/2009/04/27,M,10
M,11441,0000000003349,33,NY/15/2009/04/25,M,15
M,13133,0000000003339,33,Shanghai/71T/2009/05/31,,
J,13133,0000000003433,33,Korea/01/2009/05/02,,
M,04057,0000000002236,23,West Virginia/01/2009/05/24,,,
J,05036,0000000002233,23,Texas/19/2009/04/26,F,33
M,09055,0000000002225,23,Michigan/06/2009/05/02,,,
M,01057,0000000001113,13,Italy/20/2009/06/07,M,37
J,11997,0000000002233,23,Paris/2591/2009/05/01,M,23
J,05602,0000000003344,33,Louisiana/03/2009/05/01,F,1
J,09170,0000000003344,33,Nonthaburi/102/2009//,,
M,05036,0001000002223,23,Moscow/226/2009//,,
J,02497,0000000002222,23,Mexico/4516/2009/04/25,M,41
K,13139,0000000003933,99,Kobe/1/2009//,,
K,13139,0000000003933,99,Amagasaki/1/2009//,,
K,13139,0000000003933,99,Osaka-C/1/2009/05/16,,
K,13139,0000000003933,99,Hyogo/2/2009/05/17,,
K,13139,0000000003933,99,Amagasaki/2/2009//,,
K,13139,0000000003933,99,Osaka/2/2009/05/16,,
K,13139,0000000003933,99,Himeji/1/2009//,,
K,13139,0000000003933,99,Sakai/2/2009//,,
K,13139,0000000003933,99,Sakai/1/2009//,,
K,13139,0000000003933,99,Osaka/1/2009/05/16,,
K,13139,0000000003933,99,Osaka-C/2/2009/05/17,,
K,13139,0000000003933,99,Hyogo/1/2009/05/17,,
K,13139,0000000003933,99,Shiga/2/2009//,,
M,03101,0000000001134,35,Victoria/04/2009/05/21,M,25
L,01139,0000000000022,25,Mexico City/13/2009/05/01,,44
L,00584,0000000000011,15,Mexico City/15/2009/05/01,,20
L,01722,0000000000011,15,Texas/31/2009/05/12,,,
L,02272,0000000001122,25,Pennsylvania/06/2009/04/29,M,23
L,01139,0000000000011,15,Mexico City/66/2009/05/05,,12
L,03129,0000000001122,25,Mexico/4593/2009/04/20,F,13
M,02963,0000000001124,25,Athens/992/2009/06/16,,,
L,01139,0000000000011,15,Mexico City/46/2009/05/03,,27
L,01139,0000000000022,25,Mexico City/55/2009/05/03,,5
L,01139,0000000000022,25,Mexico City/26/2009/05/02,,46
L,01139,0000000000022,25,Mexico City/69/2009/05/04,,19
L,01139,0000000000022,25,Mexico City/53/2009/05/03,,27
L,01139,0000000000011,15,Mexico City/54/2009/05/03,,3
M,03676,0000000001136,35,Catalonia/366/2009/06/18,,
M,05602,0000000003359,55,NY/39/2009/04/25,F,25
L,00817,0000000000011,15,Dublin/05/2009/05/31,F,29
M,04623,0000000003357,55,NY/37/2009/04/25,F,17
M,08714,000000000335:,55,Massachusetts/06/2009/04/26,M,9
M,12160,0000000003359,55,Nebraska/03/2009/04/27,F,61
M,08706,000000000335:,55,NY/12/2009/04/25,F,17
M,10862,000000000335:,55,NY/13/2009/04/25,F,17
M,01722,0000000000012,15,NY/05/2009/04/,F,14
M,04108,0000000001136,35,NY/08/2009/04/25,F,14
M,04623,0000000003357,55,NY/35/2009/04/25,F,16
L,01139,0000000000022,25,Mexico City/18/2009/05/01,,2
L,00579,0000000000011,15,Mexico City/42/2009/05/02,,56
L,13139,0000000003355,55,NY/3352/2009/05/06,,,
L,00579,0000000000011,15,Mexico City/71/2009/05/04,,12
L,05464,0000000003355,55,North Dakota/04/2009/05/11,M,49
L,00579,0000000000011,15,Mexico City/90/2009/05/02,,48
L,13139,0000000003355,55,Shiga/1/2009//,,
L,00579,0000000000011,15,Mexico City/41/2009/05/02,,8
L,11952,0000000003355,55,Auckland/1/2009/04/25,M,18
L,00579,0000000000011,15,Mexico City/78/2009/05/05,,8
M,03678,0000000001136,35,Catalonia/308/2009/05/25,,
L,00579,0000000000011,15,Mexico City/79/2009/05/05,,19
L,05602,0000000003355,55,Wisconsin/10/2009/05/04,F,13
L,10858,0000000003355,55,Finland/554/2009/05/26,,
L,13133,0000000003355,55,Beijing/3/2009/05/20,M,19
L,13133,0000010003355,55,Beijing/501/2009/05/21,,
L,13139,0000000002244,45,Mexico/4603/2009/04/19,F,59
L,00579,0000000000011,15,Mexico City/50/2009/05/03,,3
L,00832,0000000000011,15,Dublin/03/2009/05/26,F,21
M,03101,0000000001134,35,Philippines/2009/2009/05/23,,,
L,00579,0000000000011,15,Mexico City/96/2009/05/02,,26
L,00846,0000000001122,25,Dublin/08/2009/06/03,F,31
L,00862,0000000001122,25,Dublin/06/2009/06/01,M,
L,01722,0000000000011,15,Oregon/04/2009/04/27,F,58
L,13139,0000000003355,55,NY/3337/2009/05/04,,,
L,13139,0000000003355,55,NY/3348/2009/04/28,,,
L,00846,0000000001122,25,Dublin/04/2009/05/29,M,38
L,13133,0000000003355,55,Shandong/1/2009/05/10,,
L,00818,0000000000011,15,Dublin/09/2009/06/02,F,26
M,04094,0000000001136,35,South AUS/01/2009/05/,,15
M,03681,0000000001136,35,Catalonia/360/2009/06/15,,
L,00579,0000000000011,15,Mexico City/81/2009/05/05,,11
L,13133,0000000003356,55,Michigan/02/2009/04/26,F,34
L,00579,0000000000011,15,Mexico City/74/2009/05/05,,4
L,04068,0000000000022,25,Auckland/4/2009/04/,M,
L,04020,0000000001133,35,Auckland/3/2009/04/25,M,16
L,00579,0000000000011,15,Mexico City/97/2009/05/02,,8
L,10991,0000000003355,55,Rhode Island/02/2009/04/28,M,29
L,01139,0000000000011,15,Mexico City/45/2009/05/03,,10
L,04840,0000000000011,15,Mexico/4595/2009/04/20,F,8
L,10011,0000000003355,55,Mexico/4482/2009/04/14,F,29
L,00579,0000000000011,15,Mexico City/100/2009/05/02,,55
L,02014,0000000001133,35,Poland/37/2009/05/05,F,58
L,04108,0000000001133,35,Florida/11/2009/04/30,,,
L,09497,0000000001133,35,Texas/23/2009/04/27,,14
L,03129,0000000001133,35,Mexico/4575/2009/04/20,F,49
L,01139,0000000000011,15,Mexico City/67/2009/05/05,,39
M,01722,0000000000012,15,NY/30/2009/04/,F,17
L,01139,0000000000011,15,Mexico City/6/2009/05/01,,34
M,01975,0000001001123,25,Athens/968/2009/06/15,,,
L,00579,0000000000011,15,Mexico City/60/2009/05/03,,19
L,00584,0000000000011,15,Mexico City/47/2009/05/03,,12
L,01139,0000000000022,25,Mexico City/16/2009/05/01,,9
L,01139,0000000000022,25,Mexico City/4/2009/05/01,,32
L,01139,0000000000022,25,Mexico City/39/2009/05/02,,36
L,01139,0000000000022,25,Mexico City/17/2009/05/01,,16
L,04623,0000000003355,55,Wisconsin/11/2009/05/04,M,58
L,04108,0000000001133,35,Maine/03/2009/05/09,,,
L,05464,0000000003355,55,Vermont/03/2009/05/04,F,35
L,04108,0000000001133,35,Rhode Island/03/2009/04/30,,,
L,01139,0000000000022,25,Mexico City/65/2009/05/05,,1
L,01139,0000000000022,25,Mexico City/64/2009/05/03,,5
L,01139,0000000000022,25,Mexico City/73/2009/05/04,,2
L,01139,0000000000022,25,Mexico City/48/2009/05/03,,15
M,01722,0000000000012,15,NY/04/2009/04/,F,17
L,02410,0000000001122,25,Texas/33/2009/05/12,,,
L,01722,0000000000011,15,Nanjing/1/2009/06/18,,
L,03993,0000000000011,15,Mexico/4502/2009/04/17,F,3
L,00579,0000000000011,15,Mexico City/86/2009/05/02,,51
M,03129,0000000001134,35,NY/17/2009/04/,F,17
L,00579,0000000000011,15,Mexico City/38/2009/05/02,,28
M,04623,0000000003357,55,Massachusetts/07/2009/04/25,M,13
L,00579,0000000000011,15,Mexico City/37/2009/05/02,,7
L,00579,0000000000011,15,Mexico City/77/2009/05/05,,7
L,04108,0000000001133,35,Louisiana/05/2009/05/01,,,
M,01722,0000000000012,15,NY/28/2009/04/,F,14
L,00846,0000000001122,25,Dublin/10/2009/06/04,F,49
M,01722,0000000000012,15,NY/26/2009/04/24,F,17
M,13133,0000000002248,45,Guangdong/03/2009/05/29,,
M,04108,0000000001136,35,NY/16/2009/04/24,F,17
L,00579,0000000000011,15,Mexico City/63/2009/05/03,,32
L,13139,0000000003355,55,Mexico/4604/2009/04/19,F,52
L,00579,0000000000011,15,Mexico City/98/2009/05/02,,17
M,12160,0000000003359,55,NY/21/2009/04/24,M,14
M,04108,0000000001136,35,NY/24/2009/04/24,M,14
M,07741,0000000003359,55,Virginia/04/2009/04/27,F,25
M,03100,0000000001135,35,Istanbul/30/2009/05/14,M,26
M,09889,0000000003359,55,Kentucky/07/2009/05/04,,,
L,02701,0000000000011,15,Kentucky/06/2009/05/04,,,
L,00860,0000000001122,25,Dublin/07/2009/06/01,M,
L,01139,0000000000011,15,Mexico City/9/2009/05/01,,31
L,01722,0000000000012,15,Castro/JXP/2009/06/11,F,26
L,03999,0000000000011,15,Mexico/4635/2009/04/20,F,30
L,02410,0000000001122,25,Massachusetts/11/2009/05/11,,,
L,01139,0000000000011,15,Mexico City/20/2009/05/01,,10
L,02410,0000000001122,25,Massachusetts/10/2009/05/03,,,
L,00579,0000000000011,15,Mexico City/92/2009/05/02,,31
M,06771,0000000003357,55,New Jersey/01/2009/04/,F,22
M,04108,0000000001136,35,Texas/32/2009/05/11,,,
L,01722,0000000000012,15,Utah/02/2009/04/28,,,
L,01431,0000000001122,25,Massachusetts/09/2009/05/10,,,
L,00859,0000000001122,25,Dublin/02/2009/05/25,,
L,00579,0000000000011,15,Mexico City/94/2009/05/02,,26
L,01139,0000000000022,25,Mexico City/49/2009/05/03,,10
L,01139,0000000000011,15,Mexico City/75/2009/05/05,,4
L,02701,0000000000011,15,Sao Paulo/1454/2009/04/29,M,26
L,01139,0000000000022,25,Mexico City/40/2009/05/02,,8
L,01139,0000000000022,25,Mexico City/11/2009/05/01,,4
M,01708,0000000000012,15,Philippines/03/2009/05/25,F,18
M,01571,0000000000012,15,Catalonia/331/2009/06/03,,
M,02351,0000000001123,25,Chile/8947/2009/05/17,F,44
M,02351,0000000001123,25,Chile/8886/2009/05/18,M,6
M,04039,0000000001136,35,Brisbane/17/2009/05/07,F,28
M,13133,000000000335:,55,Shanghai/1/2009/05/23,M,30
L,01139,0000000000022,25,Mexico City/31/2009/05/02,,9
L,01139,0000000000022,25,Mexico City/5/2009/05/01,,16
M,09798,0000000001135,35,Tennessee/1-560/2009/05/01,,
M,07873,0000000003359,55,Wash.DC/01/2009/04/27,F,24
L,13139,0000000003355,55,Nonthaburi/102/2009/05/,,
L,01139,0000000000022,25,Mexico City/70/2009/05/04,,4
M,03106,0000000001134,35,Victoria/01/2009/05/19,M,9
L,01139,0000000000022,25,Mexico City/61/2009/05/03,,30
L,01722,0000000000011,15,Milan/UHSR1/2009/05/21,F,24
L,02335,0000000001122,25,Nonthaburi/104/2009/05/10,,
L,02306,0000000001122,25,Nonthaburi/102/2009/05/06,,
M,03129,0000000001134,35,NY/27/2009/04/,M,14
M,03101,0000000001134,35,Darwin/01/2009/05/29,F,28
L,01139,0000000000011,15,Mexico City/1/2009/05/01,,18
L,00584,0000000000011,15,Mexico City/44/2009/05/03,,22
L,01139,0000000000022,25,Mexico City/105/2009/05/04,,21
L,01139,0000000000022,25,Mexico City/57/2009/05/03,,7
L,02701,0000000000011,15,Massachusetts/08/2009/05/07,,,
L,08581,0000000003355,55,Finland/555/2009/05/28,,
L,03579,0000000001122,25,Utah/03/2009/05/15,,,
L,13139,0000000003355,55,Tokushima/1/2009//,,
L,13139,0000000003355,55,THA/104/2009/05/06,,
M,03129,0000000001134,35,NY/34/2009/04/25,F,14
M,01722,0000000000012,15,Moscow/03/2009/06/04,,
M,10862,000000000335:,55,NY/19/2009/04/25,F,14
M,05400,0000000001134,35,NY/09/2009/04/25,F,17
L,00579,0000000000011,15,Mexico City/87/2009/05/02,,61
L,00579,0000000000011,15,Mexico City/99/2009/05/02,,2
L,13139,0000000003355,55,NY/3351/2009/05/06,,,
L,00579,0000000000011,15,Mexico City/76/2009/05/05,,35
M,13139,000000000335:,55,Canada-ON/RV1526/2009//,,
M,02351,0000000001123,25,Chile/8949/2009/05/18,M,11
M,03129,0000000001134,35,NY/14/2009/04/,F,17
L,01139,0000000000022,25,Mexico City/58/2009/05/03,,21
M,01596,0000000000002,2;,Athens/948/2009/06/13,F,20
M,01645,0000000000002,2;,Athens/943/2009/06/12,F,10 month
M,03136,0000000000001,1;,Massachusetts/07/2009/04/26,M,13
M,01623,0000000000002,2;,Athens/924/2009/06/12,M,22
M,00912,0000000000001,1;,Italy/47/2009/06/05,,
M,13139,000000000335;,;;,NY/3265/2009/04/29,,
M,13124,000000000335;,;;,NY/3049/2009/04/27,,15
M,13127,000000000335;,;;,NY/3223/2009//,,16
M,00565,0000000000001,1;,Toronto/3141/2009/04/,M,28
M,13139,000000000335;,;;,Zhejiang/2/2009/05/31,F,39
M,13139,000000000335;,;;,NY/3168/2009/04/26,,9
M,13127,000000000335;,;;,NY/3225/2009/04/27,,15
M,10991,000000000335;,;;,Georgia/01/2009/04/27,F,12
M,13130,000000000335;,;;,NY/3007/2009/04/27,,33
M,10868,000000000335;,;;,NY/3215/2009/04/25,,15
M,13139,000000000335;,;;,Moscow/02/2009/05/26,,
M,13133,000000000335;,;;,Guangdong/02/2009/05/27,M,28
M,13133,000000000335;,;;,Guangdong/05/2009/05/29,,
M,00565,0000000000001,1;,Toronto/3146/2009/04/,F,22
M,01003,0000000000001,1;,Athens/987/2009/06/15,,,
M,10866,000000000335;,;;,Finland/553/2009/05/10,,
M,10028,0000000002227,7;,Shanghai/60T/2009/05/28,,
M,00623,0000000000001,1;,Athens/996/2009/06/16,,,
M,02301,0000000000001,1;,Nevada/03/2009/04/26,F,2
M,08090,0000000000016,6;,NY/25/2009/04/24,M,15
M,00644,0000000000002,2;,Rio de Janeiro/332/2009/05/30,M,48
M,04195,0000000002237,7;,NY/33/2009/04/25,F,14
M,13133,000000000335;,;;,Fuzhou/01/2009/05/28,,
M,13133,000000000335;,;;,Fujian/1/2009/05/22,F,1
M,12933,000000001335;,;;,Italy/49/2009/05/27,F,26
M,13133,000000000335;,;;,CA/14/2009/04/25,M,13
M,13130,000000000335;,;;,NY/3219/2009//,,
M,13139,000000000335;,;;,NY/3235/2009/04/28,,14
M,13139,000000000335;,;;,NY/3252/2009//,,15
M,13130,000000000335;,;;,NY/3220/2009//,,14
M,13116,000000000335;,;;,NY/20/2009/04/25,F,15
M,13139,000000000335;,;;,NY/3468/2009/05/17,,,
M,13130,000000000335;,;;,NY/3012/2009/04/27,,39
M,00912,0000000000002,2;,Catalonia/329/2009/06/03,,
M,13139,000000000335;,;;,NY/11/2009/04/25,F,16
M,10868,000000000335;,;;,NY/31/2009/04/24,F,14
M,13124,000000000335;,;;,NY/3222/2009//,,15
M,13139,000000000335;,;;,NY/3210/2009/04/24,,18
M,13139,000000000335;,;;,NY/3209/2009/04/25,,17
M,13139,000000000335;,;;,NY/3211/2009/04/28,,16
M,13139,000000000335;,;;,Yokohama/1/2009//,,
M,13139,000000000335;,;;,Shiga/3/2009//,,
M,00924,0000000000001,1;,Italy/45/2009/06/05,,
M,00582,0000000000001,1;,Toronto/3145/2009/04/,F,22
M,13136,000000000335;,;;,NY/3207/2009/04/26,,14
M,13127,000000000335;,;;,NY/3231/2009//,,,
M,13139,000000000335;,;;,NY/3176/2009/04/26,,15
M,13130,000000000335;,;;,NY/3014/2009/04/27,,14
M,13139,000000000335;,;;,NY/3188/2009/04/28,,14
M,13136,000000000335;,;;,NY/3187/2009/05/01,,15
M,13139,000000000335;,;;,NY/3260/2009/04/27,,18
M,13139,000000000335;,;;,Canada-ON/RV1529/2009//,,
M,13139,000000000335;,;;,Canada-ON/RV1527/2009/04/24,,
M,10991,000000000335;,;;,NY/22/2009/04/24,M,14
M,13135,000000000335;,;;,NY/3185/2009/04/29,,17
M,13130,000000000335;,;;,NY/3261/2009/04/29,,
M,00735,0000000000001,1;,Italy/60/2009//,,
M,13136,000000000335;,;;,NY/3264/2009/04/29,,
M,00931,0000000000001,1;,Italy/46/2009/06/05,,
M,13139,000000000335;,;;,NY/3203/2009/04/27,,51
M,13139,000000000335;,;;,NY/3184/2009/04/28,,16
M,00671,0000000000001,1;,Athens/939/2009/06/12,F,51
M,13139,000000000335;,;;,NY/3166/2009/04/26,,16
M,13139,000000000335;,;;,NY/3002/2009/04/25,,52
M,13139,000000000335;,;;,NY/3173/2009/04/28,,19
M,13133,000000000335;,;;,NY/3202/2009//,,15
M,13033,000000000335;,;;,NY/3238/2009/04/28,,17
M,13139,000000000335;,;;,NY/3247/2009/04/29,,,
M,13139,000000000335;,;;,Ohio/07/2009/04/24,M,9
M,13139,000000000335;,;;,Canada-AB/RV1532/2009//,,
M,00555,0000000000001,1;,Athens/761/2009/05/26,,
M,00997,0000000000001,1;,Italy/50/2009/06/08,,,
M,01642,0000000000003,3;,Athens/926/2009/06/12,M,8.5m
M,13139,000000000335;,;;,NY/3413/2009/05/11,,,
M,13139,000000000335;,;;,NY/3408/2009/05/02,,,
M,13139,000000000335;,;;,NY/3201/2009//,,13
M,13139,000000000335;,;;,NY/10/2009/04/25,F,17
M,13139,000000000335;,;;,NY/3257/2009//,,15
M,13139,000000000335;,;;,NY/3170/2009/05/02,,24
M,13139,000000000335;,;;,NY/3206/2009/04/26,,,
M,13139,000000000335;,;;,NY/3194/2009/04/30,,9
M,13127,000000000335;,;;,NY/3242/2009//,,15
M,13136,000000000335;,;;,NY/3214/2009/04/25,,14
M,13139,000000000335;,;;,NY/3204/2009/04/27,,18
M,13139,000000000335;,;;,NY/3230/2009/04/28,,
M,13139,000000000335;,;;,NY/3172/2009/04/27,,18
M,13139,000000000335;,;;,NY/3236/2009/04/28,,11
M,13136,000000000335;,;;,NY/3190/2009/04/29,,13
M,13133,000000000335;,;;,NY/3205/2009/04/26,,14
M,13133,000000000335;,;;,Shanghai/37T/2009/05/24,,
M,00680,0000000000001,1;,Athens/920/2009/06/11,F,18
M,13139,000000000335;,;;,NY/3245/2009//,,16
M,13127,000000000335;,;;,NY/3246/2009//,,17
M,00681,0000000000001,1;,Athens/919/2009/06/11,M,46
M,13139,000000000335;,;;,NY/3463/2009/05/14,,,
M,00927,0000000000001,1;,Italy/43/2009/06/03,,
M,13139,000000000335;,;;,NY/3193/2009/04/28,,15
M,13139,000000000335;,;;,NY/18/2009/04/25,M,15
M,00627,0000000000002,2;,Rio de Janeiro/307/2009/05/27,F,25
M,00470,0000000000001,1;,Switzerland/01/2009/04/28,,
M,01003,0000000000001,1;,Larisa/1001/2009/06/14,,,
M,01646,0000000000002,2;,Athens/893/2009/06/09,M,24
M,00677,0000000000001,1;,Athens/940/2009/06/12,F,18
M,00644,0000000000002,2;,Rio de Janeiro/290/2009/05/24,F,24
M,00626,0000000000001,1;,Ankara/1/2009//,,
M,00924,0000000000001,1;,Italy/48/2009/06/05,,
M,13130,000000000335;,;;,NY/3008/2009/04/27,,50
M,13133,000000000335;,;;,NY/3232/2009/04/30,,
M,13139,000000000335;,;;,NY/3196/2009/04/28,,17
M,13139,000000000335;,;;,NY/06/2009/04/25,F,21
M,13139,000000000335;,;;,NY/3227/2009/04/28,,17
M,13130,000000000335;,;;,NY/3237/2009/04/28,,16
M,13136,000000000335;,;;,NY/3255/2009//,,17
M,13130,000000000335;,;;,NY/3258/2009//,,20
M,13133,000000000335;,;;,Moscow/01/2009/05/21,,
M,13139,000000000335;,;;,NY/3354/2009/05/08,,,
M,13136,000000000335;,;;,NY/3253/2009//,,17
M,13133,000000000335;,;;,NY/3239/2009//,,18
M,13133,000000000335;,;;,NY/3218/2009//,,10
M,13139,000000000335;,;;,NY/3186/2009/04/26,,16
M,13130,000000000335;,;;,NY/3191/2009/04/25,,15
M,13139,000000000335;,;;,NY/3313/2009/05/04,,13
M,13136,000000000335;,;;,NY/3169/2009/04/26,,15
M,13133,000000000335;,;;,NY/3221/2009//,,15
M,13136,000000000335;,;;,NY/3149/2009//,,
M,13139,000000000335;,;;,NY/23/2009/04/24,F,17
M,13124,000000000335;,;;,NY/3244/2009//,,14
M,13130,000000000335;,;;,NY/3234/2009/04/28,,18
M,13136,000000000335;,;;,NY/3259/2009//,,15
M,13139,000000000335;,;;,NY/3243/2009//,,14
M,13139,000000000335;,;;,NY/3195/2009/04/28,,18
M,13139,000000000335;,;;,NY/3199/2009/04/28,,15
M,13139,000000000335;,;;,NY/3532/2009/05/16,,,
M,13136,000000000335;,;;,NY/3263/2009//,,
M,13058,000000000335;,;;,Bayern/63/2009//,,
M,13127,000000000335;,;;,NY/3189/2009/04/29,,12
M,00600,0000000000001,1;,Athens/918/2009/06/11,F,33
M,13133,000000000335;,;;,Zhejiang/1/2009/05/23,M,20
M,00621,0000000000001,1;,Italy/44/2009//,,
M,13133,000000000335;,;;,NY/3262/2009/04/27,,15
M,01556,0000000000003,3;,Larisa/1002/2009/06/14,,,
M,01584,0000000000002,2;,Athens/793/2009/05/28,,
M,13139,000000000335;,;;,******/Cancun-NY/Index/2009-04-15,,,

---------------------------------------------------
new list of ****** substrains, extracted from 833 full genomes per Nov.25.2009 :

Code:

28
early Mex,0
 Northern,2,A1741C,3,C1118T,5
  Houston,5,A1741C,3,C1118T,5,G0571A,2,C0145A,4,A0283G,6
  Sask,11,A1741C,3,C1118T,5,A0541G,2,C1332T,2,A1603G,2,G0797A,3,C1945T,3,T1354C,4,T0480C,5,C1389A,5,T0711C,6
  swine,6,A0588G,3,A1741C,3,C0022A,4,C1118T,5,A0283G,6,C0738A,8
  Jersey,6,G0799A,1,A1741C,3,G0687T,4,A0877G,4,G1173A,4,C1118T,5
  Nova Scotia,3,A1577G,1,A1741C,3,C1118T,5
  Hamburg,7,A1577G,1,A1741C,3,C1118T,5,G0786A,6,C0397A,5,T0267C,5,G0037A,4
 Texas,7,G1308A,1,T0450C,2,A0561C,3,G1173A,4,G1563A,4,G0522A,7,A0775G,8
 early US,3,A1218G,1,G1986T,3,A1044G,6 
  CAFuk,8,A1218G,1,G1986T,3,A1044G,6,T1872C,1,T0670C,3,T0298C,4,G0891A,4,G1012A,4
 airplane,1,G0546A,1
  Wisconsin3,5,G0546A,1,C0547A,1,G0037A,4,A0723G,4,C0896T,4
  airmany,4,G0546A,1,A1058G,2,A0300G,2,C0145A,4
   StoDomingo,13,G0546A,1,A1058G,2,A0300G,2,C0145A,4,A0273G,1,T1854C,1,T1275C,2,T0435A,3,A0456G,3,C0870T,4,A1429G,4,G0165A,7,C0717A,7
   England,7,G0546A,1,A2030G,1,A0300G,2,A1058G,2,A0008G,3,C0145A,4,C0132T,5
 Korea,3,G0298A,5,G1143A,5,G0316A,6
  Japan,9,T1711C,1,G1945A,1,G0636A,2,T2000C,2,G0936A,3,G0298A,5,G1143A,5,G0316A,6,G0659A,8
  pre-Cancun,5,C1408T,4,G0298A,5,G1143A,5,G0316A,6,A0742G,6
   Wisconsin1,8,C1408T,4,G0298A,5,G1143A,5,G0316A,6,A0742G,6,C0696T,7,G0892A,7,C0954T,6
   Wisconsin2,13,C1408T,4,G0298A,5,G1143A,5,G0316A,6,A0742G,6,C0696T,7,G0892A,7,C0954T,6,A1051G,1,T1150C,2,G1680A,2,G0576A,4,C0148T,4
   Manitoba,10,C1408T,4,G0298A,5,G1143A,5,G0316A,6,A0742G,6,C0888T,1,G0603A,2,C2076T,2,A0004G,4,G0930T,4
   Cancun,11,G2163A,1,T0658A,4,C1408T,4,G0298A,5,G1143A,5,G1248A,5,G0316A,6,A0742G,6,G0492A,7,G0600A,7,A0367G,8
    TexDen,15,G2163A,1,T0658A,4,C1408T,4,G0298A,5,G1143A,5,G1248A,5,G0316A,6,A0742G,6,G0492A,7,G0600A,7,A0367G,8,A0177T,1,T2189C,2,G0624A,5,G0279A,8
    Singapore,14,G2163A,1,T0658A,4,C1408T,4,G0298A,5,G1143A,5,G1248A,5,G0316A,6,A0742G,6,G0492A,7,G0600A,7,A0367G,8,T1899C,1,A1979G,1,G0477A,3
    NY47,28,G2163A,1,T0658A,4,C1408T,4,G0298A,5,G1143A,5,G1248A,5,G0316A,6,A0742G,6,G0492A,7,G0600A,7,A0367G,8,C0334T,1,G0480A,1,T0774C,1,T1626C,1,C1332T,2,A1467T,2,A1920G,2,G2091A,2,T1335C,3,T1527C,3,T0717C,4,A0898G,4,C1140T,4,G0201A,5,A0923G,6,C0163A,8,A0208G,8
    Zhejiang,24,G2163A,1,T0658A,4,C1408T,4,G0298A,5,G1143A,5,G1248A,5,G0316A,6,A0742G,6,G0492A,7,G0600A,7,A0367G,8,G0282A,1,G1438A,1,G0705A,2,T1857C,2,G1163A,3,C1263T,3,A1845G,3,G2019A,3,G1968A,3,G0268T,4,C0259T,4,A0716G,4,T0933C,4
    MexWR,24,G2163A,1,T0658A,4,C1408T,4,G0298A,5,G1143A,5,G1248A,5,G0316A,6,A0742G,6,G0492A,7,G0600A,7,A0367G,8,G0110C,1,A1381G,1,A1674G,1,A0366G,2,T1760G,2,T2241C,2,C0480T,3,T1305C,3,C1434T,5,G1097A,6,A0189G,8,C0643T,8,G0724A,8

more substrains i.e. in Catalonia, but no full genomes are available

0,2,5,11,6,6,3,7,7,3,8,5,1,4,13,7,3,9,5,8,13,10,11,15,14,28,24,24 markers for the 28 groups
11,15,7,5,15,6,18,10,9,3,7,10,20,19,12,12,5,14,25,164,7,40,316,8,61,6,3,5 viruses in the 28 groups

picture: http://magictour.free.fr/panflu/MXFLEB9b.GIF

gsgs · Aug 18, 2010

Re: swine flu sequences (thread from h5n1experts)

----------posted:2009/07/10 -------------

mutates like crazy in these Alberta-swine
or the lab "produces" these mutations ?

Code:

                                             00001111 0111122 001122 0000000000000000000000111111 000011 00000000000000000000111111111 0000000000000000000000 000 
                                             45793568 9145902 562701 0000233455666677788999022377 166711 01112233333455678899001112223 0223344444555667888999 347 
                                             87492511 2323615 711652 1556814699467724438456803457 314166 94566700189734100647260381372 0151202458567491178122 326 
                                             04171772 7316083 328529 8140278429125921814566496816 199038 60444637883266998401050203341 1180135069377404474529 764 
-codon-position------------------------------ 1 11     22 12     1 2      2 21222 12 1 2 2 1  12  211221  212   1 1 12 111 12  2111 21 11 1 122  1 12  112 12 1 2 
---Index-------------------------------------TCGACCTC ACTTACC CAAAGT AGCTTCACGATGTTAGAGTAAACAAACC TGATCG ATAATGAGTCTAATAATTAAATGTTAAAA ATGATTAATCATTAAAGTCGAG TTC 
  1 >A/swine/Alberta/OTH-33-7/2009/05/05/    -------- ------- ------ .AA...G..GC..............C.. ------ ......G....GG.G...T........G. G...A....T...........A ---       46     46 ,     16     16      1:>A/swine/Alberta/OTH-33-7/2009/05/05/    
  2 >A/swine/Alberta/OTH-33-25/2009/05/02/   -------- ------- ------ ---------------------------- ------ ......G...................... .C...................A ---       61     61 ,      3      3      2:>A/swine/Alberta/OTH-33-25/2009/05/02/   
  3 >A/swine/Alberta/OTH-33-1/2009/05/03/    -------- ------- ------ .AA.C.............CG........ ------ ......G.........CC.G......... ...G...........G...... ---       41     41 ,     11     11      3:>A/swine/Alberta/OTH-33-1/2009/05/03/    
  4 >A/swine/Alberta/OTH-33-23/2009/05/03/   -------- ------- ------ .AA....A................G... ------ ....A.G..............CA...... ..A.....C.......A..... ---       41     41 ,     11     11      4:>A/swine/Alberta/OTH-33-23/2009/05/03/   
  5 >A/swine/Alberta/OTH-33-24/2009/05/03/   -------- ------- ------ .AA........T..GA............ ------ G..G..G...C.................. .......G...C.......A.. ---       42     42 ,     12     12      5:>A/swine/Alberta/OTH-33-24/2009/05/03/   
  6 >A/swine/Alberta/OTH-33-21/2009/05/05/   -------- ------- ------ .AA.C........CGA.....G...... ------ ..G...G.................C.... ...................... ---       40     40 ,     10     10      6:>A/swine/Alberta/OTH-33-21/2009/05/05/   
  7 >A/swine/Alberta/OTH-33-22/2009/05/05/   -------- ------- ------ ---------------------------- ------ ......G......C..............G ..........G.C......... ---       63     63 ,      5      5      7:>A/swine/Alberta/OTH-33-22/2009/05/05/   
  8 >A/swine/Alberta/OTH-33-3/2009/05/03/    -------- ------- ------ .AAC.T..A.......TA.....G.... ------ .....AG...................... .....C.......G.G...... ---       43     43 ,     13     13      8:>A/swine/Alberta/OTH-33-3/2009/05/03/    
  9 >A/swine/Alberta/OTH-33-14/2009/05/05/   -------- ------- ------ ---------------------------- ------ ......G...................G.. ....................G. ---       61     61 ,      3      3      9:>A/swine/Alberta/OTH-33-14/2009/05/05/   
 11 >A/swine/Alberta/OTH-33-2/2009/05/03/    -------- ------- ------ CAA.........A.......G.T...TA ------ .C....G........C.......C.G... ......G..........C.... ---       45     45 ,     15     15     11:>A/swine/Alberta/OTH-33-2/2009/05/03/    
 12 >A/swine/Alberta/OTH-33-8/2009///        ATTCTTCT GGCCGTT AGGCAC CAA.........A.......G.T...TA CAGCTT ......GACT..........T........ ..............G...T... CAA       45     45 ,     45     45     12:>A/swine/Alberta/OTH-33-8/2009///        
 10 >A/******/index/2009-02-01               ........ ....... ...... -.........................-- ...... ............................. -..................... ...        4      4 ,      0      0     10:>A/******/index/2009-02-01               
                                                                                                                                                                  
---Index-------------------------------------TCGACCTC ACTTACC CAAAGT AGCTTCACGATGTTAGAGTAAACAAACC TGATCG ATAATGAGTCTAATAATTAAATGTTAAAA ATGATTAATCATTAAAGTCGAG TTC 
-codon-position------------------------------ 1 11     22 12     1 2      2 21222 12 1 2 2 1  12  211221  212   1 1 12 111 12  2111 21 11 1 122  1 12  112 12 1 2 
                                             00001111 0111122 001122 0000000000000000000000111111 000011 00000000000000000000111111111 0000000000000000000000 000 
                                             45793568 9145902 562701 0000233455666677788999022377 166711 01112233333455678899001112223 0223344444555667888999 347 
                                             87492511 2323615 711652 1556814699467724438456803457 314166 94566700189734100647260381372 0151202458567491178122 326 
                                             04171772 7316083 328529 8140278429125921814566496816 199038 60444637883266998401050203341 1180135069377404474529 764

compare with the human viruses from the Japan-subgroup:

Code:

                                 1122 00111122 001 00011 011 00 0 000 
                                 7911 16159900 592 35914 213 36 4 567 
                                 1445 93870103 531 20865 947 15 6 356 
                                 1523 66611001 264 75615 831 61 4 299 
-codon-position------------------11 2 1 12222    2  12   1   1  2 121 
---Index-------------------------TGCA CGCGATTA TGG AGTTC GGC GG C GGT 
  1 >K /Shiga/2/2009//           CA.. .AA...C. CA. ..... AAT A. . .A.       12     12 ,     12     12      1:>K /Shiga/2/2009//           
  2 >K /Himeji/1/2009//          CA.. .A....C. .A. ..... AA. A. . .A.        9      9 ,      9      9      2:>K /Himeji/1/2009//          
  3 >K /Osaka/1/2009/05/16       CA.. .A..G.C. .A. .A... AA. A. . .A.       11     11 ,     11     11      3:>K /Osaka/1/2009/05/16       
  4 >K /Amagasaki/1/2009//       CA.. .A....CT .A. ...A. AA. A. . .A.       11     11 ,     11     11      4:>K /Amagasaki/1/2009//       
  5 >K /Sakai/1/2009//           CA.. .A....C. .AT ...A. AA. A. . .A.       11     11 ,     11     11      5:>K /Sakai/1/2009//           
  6 >K /Osaka-C/2/2009/05/17     CA.. .A....C. .A. ..... AA. A. . .A.        9      9 ,      9      9      6:>K /Osaka-C/2/2009/05/17     
  7 >K /Osaka/2/2009/05/16       CA.. .A....C. .A. ....T AA. A. . .A.       10     10 ,     10     10      7:>K /Osaka/2/2009/05/16       
  8 >K /Hyogo/1/2009/05/17       CA.. .A....C. .A. ..... AA. AA . .AC       11     11 ,     11     11      8:>K /Hyogo/1/2009/05/17       
  9 >K /Sakai/2/2009//           CA.. AA.T..C. .AT C.CA. AA. A. . .A.       15     15 ,     15     15      9:>K /Sakai/2/2009//           
 10 >K /Amagasaki/2/2009//       CA.. .A....C. .A. ..... AA. A. . .A.        9      9 ,      9      9     10:>K /Amagasaki/2/2009//       
 11 >K /Osaka-C/1/2009/05/16     CA.. .A...CC. .A. ..... AA. A. . .A.       10     10 ,     10     10     11:>K /Osaka-C/1/2009/05/16     
 12 >K /Kobe/1/2009//            CA.G .A....C. .A. ..... AA. A. . AA.       11     11 ,     11     11     12:>K /Kobe/1/2009//            
 13 >K /Hyogo/2/2009/05/17       CAA. .A....C. .A. ..... AA. A. T .A.       11     11 ,     11     11     13:>K /Hyogo/2/2009/05/17       
 14 >A/******/index/2009-02-01   .... ........ ... ..... ... .. . ...        0      0 ,      0      0     14:>A/******/index/2009-02-01   
                                                                      
---Index-------------------------TGCA CGCGATTA TGG AGTTC GGC GG C GGT 
-codon-position------------------11 2 1 12222    2  12   1   1  2 121 
                                 1122 00111122 001 00011 011 00 0 000 
                                 7911 16159900 592 35914 213 36 4 567 
                                 1445 93870103 531 20865 947 15 6 356 
                                 1523 66611001 264 75615 831 61 4 299

gsgs · Aug 18, 2010

Re: swine flu sequences (thread from h5n1experts)

-----------posted:2009/07/24--------------------

A :early Mex
B :Northern
C :swine
D :Jersey
E :Hamburg
F :Texas
G :early US
H :airplane
I :England
J :Korea
K :Japan
L

re-Cancun
M :Cancun

substrain
number of available nucleotides
matches with the markers of the 13 substrains
matches with the original nucleotides there
maximum maches - out of
virus-name

Code:

A,13139, 0000000000000  026637317395;  00  >A ******/index/2009-02-01
A,00397, 0000000000000  0000000000000  00  >A Belfast/1/2009//
A,00309, 0000000000000  0002000000001  00  >A Colombia/450/2009//
A,00207, 0000000000000  0000000000000  00  >A Italy/02/2009//
A,00594, 0000000000000  0000010000002  00  >A Malbran/017/2009//
A,02274, 0000000000000  0000010020200  00  >A New Jersey/04/2009//
A,00491, 0000000000000  0000000010000  00  >A Toronto/3178/2009/04/
A,00472, 0000000000000  0000000010000  00  >A Toronto/3181/2009/04/
A,00982, 0000000000000  0000010000002  00  >A Auckland/2/2009/04/24
A,00309, 0000000000000  0002000000001  00  >A Bogota/224/2009/04/25
A,04093, 0000000000000  0023031011136  00  >A Arizona/03/2009/04/26
A,00893, 0000000000000  0000010000002  00  >A Catalonia/20/2009/04/26
A,00145, 0000000000000  0000000000000  00  >A Israel/G-640/2009/04/26
A,00982, 0000000000000  0000010000002  00  >A South Carolina/11/2009/04/26
A,00772, 0000000000000  0002001000001  00  >A Bogota/176/2009/04/27
A,00145, 0000000000000  0000000000000  00  >A Israel/G-645/2009/04/27
A,00214, 0000000000000  0000000000000  00  >A Italy/01/2009/04/28
A,01825, 0000000000000  0010020000103  00  >A Aragon/GP221/2009/04/29
A,00892, 0000000000000  0000010000002  00  >A Catalonia/93/2009/04/30
A,00309, 0000000000000  0002000000001  00  >A Colombia/213/2009/04/30
A,00805, 0000000000000  0000001000011  00  >A Dublin/01/2009/05/01
A,02445, 0000000000000  0010021000114  00  >A Extremadura/GP360/2009/05/01
A,00145, 0000000000000  0000000000000  00  >A Israel/MF-70/2009/05/01
A,00558, 0000000000000  0001020000011  00  >A Mexico City/10/2009/05/01
A,00558, 0000000000000  0001020000011  00  >A Mexico City/19/2009/05/01
A,00558, 0000000000000  0001020000011  00  >A Mexico City/3/2009/05/01
A,00558, 0000000000000  0001020000011  00  >A Mexico City/8/2009/05/01
A,00558, 0000000000000  0001020000011  00  >A Mexico City/83/2009/05/01
A,00558, 0000000000000  0001020000011  00  >A Mexico City/84/2009/05/01
A,01410, 0000000000000  0010001001122  00  >A South Carolina/13/2009/05/01
A,00907, 0000000000000  0000010000002  00  >A Catalonia/148/2009/05/02
A,00145, 0000000000000  0000000000000  00  >A Israel/MF-119/2009/05/02
A,00558, 0000000000000  0001020000011  00  >A Mexico City/101/2009/05/02
A,00558, 0000000000000  0001020000011  00  >A Mexico City/23/2009/05/02
A,00558, 0000000000000  0001020000011  00  >A Mexico City/29/2009/05/02
A,00558, 0000000000000  0001020000011  00  >A Mexico City/85/2009/05/02
A,00558, 0000000000000  0001020000011  00  >A Mexico City/88/2009/05/02
A,00558, 0000000000000  0001020000011  00  >A Mexico City/89/2009/05/02
A,00558, 0000000000000  0001020000011  00  >A Mexico City/91/2009/05/02
A,00558, 0000000000000  0001020000011  00  >A Mexico City/93/2009/05/02
A,00558, 0000000000000  0001020000011  00  >A Mexico City/95/2009/05/02
A,00558, 0000000000000  0001020000011  00  >A Mexico City/43/2009/05/03
A,00982, 0000000000000  0000010000002  00  >A Idaho/03/2009/05/05
A,00558, 0000000000000  0001020000011  00  >A Mexico City/80/2009/05/05
A,00558, 0000000000000  0001020000011  00  >A Mexico City/82/2009/05/05
A,00942, 0000000000000  0000001010000  00  >A Colombia/450/2009/05/06
A,00561, 0000000000000  0001000000001  00  >A Athens/728/2009/05/18
A,00282, 0000000000000  0000000010000  00  >A Italy/11/2009/05/20
A,00282, 0000000000000  0000000010000  00  >A Italy/12/2009/05/20
A,00916, 0000000000000  0002000010001  00  >A Italy/19/2009/05/20
A,00232, 0000000000000  0000000000000  00  >A Changsha/01/2009/05/24
A,01620, 0000000000000  0001010000003  00  >A Athens/820/2009/05/31
A,00982, 0000000000000  0000010000002  00  >A Athens/896/2009/06/09
A,00603, 0000000000000  0001000000001  00  >A Athens/988/2009/06/15
A,02433, 0000000000000  0003030010014  00  >A Catalonia/375/2009/06/22
A,00455, 0000000000000  0000010000001  00  >A Catalonia/434/2009/07/01
A,00455, 0000000000000  0000010000001  00  >A Catalonia/446/2009/07/01
A,00457, 0000000000000  0000010000001  00  >A Catalonia/562/2009/07/04
A,00454, 0000000000000  0000010000001  00  >A Catalonia/563/2009/07/04
A,00455, 0000000000000  0000010000001  00  >A Catalonia/571/2009/07/04
A,00457, 0000000000000  0000010000001  00  >A Catalonia/572/2009/07/04
A,00470, 0000000000000  0000010000002  00  >A Catalonia/580/2009/07/05
A,00459, 0000000000000  0000010000001  00  >A Catalonia/586/2009/07/05
A,00457, 0000000000000  0000010000001  00  >A Catalonia/594/2009/07/06
A,00455, 0000000000000  0000010000001  00  >A Catalonia/596/2009/07/06
A,00457, 0000000000000  0000010000001  00  >A Catalonia/597/2009/07/06
A,00332, 0000000000000  0000010000001  00  >A Catalonia/598/2009/07/06
A,00461, 0000000000000  0000010000001  00  >A Catalonia/600/2009/07/06
A,00456, 0000000000000  0000010000001  00  >A Catalonia/607/2009/07/06
A,00457, 0000000000000  0000010000001  00  >A Catalonia/627/2009/07/07
A,13139, 0000000000000  026637317395;  00  >A Mexico/InDRE4115/2009//
A,13139, 0000000000000  026637317395;  00  >A Mexico/4115/2009/04/07
A,13139, 0000000000000  026637317395;  00  >A Mexico/InDRE4487/2009/04/14
A,03657, 0000000000000  0013031011136  00  >A Catalonia/10/2009/04/26
A,03676, 0000000000000  0013031011136  00  >A Catalonia/14/2009/04/26
A,03670, 0000000000000  0013031011136  00  >A Catalonia/3/2009/04/26
A,02114, 0000000000000  0010011001124  00  >A Catalonia/4/2009/04/26
A,02123, 0000000000000  0010011001124  00  >A Catalonia/8/2009/04/26
A,03670, 0000000000000  0013031011136  00  >A Catalonia/33/2009/04/27
A,03659, 0000000000000  0013031011136  00  >A Catalonia/43/2009/04/27
A,02120, 0000000000000  0010011001124  00  >A Catalonia/44/2009/04/27
A,02077, 0000000000000  0010011001124  00  >A Catalonia/49/2009/04/27
A,02551, 0000000000000  0002011010014  00  >A Andalucia/GP151/2009/04/28
A,03394, 0000000000000  0012021010115  00  >A Valencia/GP153/2009/04/28
A,03667, 0000000000000  0013031011136  00  >A Catalonia/67/2009/04/29
A,04899, 0000000000000  0033041011237  00  >A Denmark/513/2009/04/29
A,03691, 0000000000000  0013031011136  00  >A Catalonia/88/2009/04/30
A,02955, 0000000000000  0012011011125  00  >A Catalonia/128/2009/05/01
A,04876, 0000000000000  0023041011237  00  >A Lisboa/26/2009/04/
A,03671, 0000000000000  0013031011136  00  >A Catalonia/63/2009/04/28
A,02134, 0000000000000  0010011001124  00  >A Catalonia/25/2009/04/27
A,02124, 0000000000000  0010011001124  00  >A Catalonia/61/2009/04/28
A,03692, 0000000000000  0013031011136  00  >A Catalonia/79/2009/04/29
A,03677, 0000000000000  0013031011136  00  >A Catalonia/82/2009/04/29
A,00982, 0000000000000  0000010000002  00  >A Mexico/3955/2009/04/03
A,02280, 0000000000000  0001111120201  00  >A Nebraska/02/2009/04/01
A,02392, 0000000000000  0010011001124  00  >A Florida/08/2009/04/29
A,03152, 0000000000000  0013031011136  00  >A Regensburg/GER/01/2009/04/27
A,01410, 0000000000000  0010001001122  00  >A Illinois/03/2009/04/27
A,04093, 0000000000000  0023031011136  00  >A Washington/08/2009/04/27
A,01410, 0000000000000  0010001001122  00  >A Washington/10/2009/04/28
A,04093, 0000000000000  0023031011136  00  >A Oregon/07/2009/04/29
A,03111, 0000000000000  0023021011134  00  >A Washington/18/2009/04/30
A,04041, 0000000000000  0023031011136  00  >A Christchurch/2/2009/04/29
A,02392, 0000000000000  0010011001124  00  >A Florida/10/2009/04/30
A,04180, 0000000000000  0124130022237  00  >A North Carolina/06/2009/04/28
A,04180, 0000000000000  0124130022237  00  >A Oregon/06/2009/04/28
A,01701, 0000000000000  0013020010012  00  >A Jiangsu/1/2009/06/13
A,04093, 0000000000000  0023031011136  00  >A Nevada/04/2009/04/29
A,02683, 0000000000000  0013030010014  00  >A Michigan/04/2009/04/24
A,02230, 0000000000000  0020011001223  00  >A Stockholm/40/2009/06/09
A,01410, 0000000000000  0010001001122  00  >A Texas/29/2009/05/02
A,01121, 0000000000000  0001021000022  00  >A Mexico City/12/2009/05/01
A,01121, 0000000000000  0001021000022  00  >A Mexico City/14/2009/05/01
A,01121, 0000000000000  0001021000022  00  >A Mexico City/2/2009/05/01
A,01121, 0000000000000  0001021000022  00  >A Mexico City/7/2009/05/01
A,01121, 0000000000000  0001021000022  00  >A Mexico City/21/2009/05/02
A,00563, 0000000000000  0000001000011  00  >A Mexico City/25/2009/05/02
A,01121, 0000000000000  0001021000022  00  >A Mexico City/27/2009/05/02
A,01121, 0000000000000  0001021000022  00  >A Mexico City/30/2009/05/02
A,01121, 0000000000000  0001021000022  00  >A Mexico City/32/2009/05/02
A,01121, 0000000000000  0001021000022  00  >A Mexico City/35/2009/05/02
A,01121, 0000000000000  0001021000022  00  >A Mexico City/36/2009/05/02
A,01121, 0000000000000  0001021000022  00  >A Mexico City/51/2009/05/03
A,01121, 0000000000000  0001021000022  00  >A Mexico City/52/2009/05/03
A,01121, 0000000000000  0001021000022  00  >A Mexico City/56/2009/05/03
A,01121, 0000000000000  0001021000022  00  >A Mexico City/62/2009/05/03
A,01121, 0000000000000  0001021000022  00  >A Mexico City/103/2009/05/04
A,01121, 0000000000000  0001021000022  00  >A Mexico City/104/2009/05/04
A,01121, 0000000000000  0001021000022  00  >A Mexico City/72/2009/05/04
A,00563, 0000000000000  0000001000011  00  >A Mexico City/106/2009/05/05
A,01121, 0000000000000  0001021000022  00  >A Mexico City/68/2009/05/05
A,00844, 0000000000000  0010010000101  00  >A Stockholm/34/2009/05/29
A,00916, 0000000000000  0002000010001  00  >A Italy/56/2009/06/
A,01687, 0000000000000  0013020010012  00  >A Philippines/06/2009/05/25
A,00879, 0000000000000  0000010000002  00  >A Catalonia/154/2009/05/02
A,00589, 0000000000000  0002000000001  00  >A Bethlehem/CBH-70G6/2009/06/08
A,04093, 0000000000000  0023031011136  00  >A Arizona/04/2009/04/27
A,02392, 0000000000000  0010011001124  00  >A Tennessee/06/2009/04/27
A,02392, 0000000000000  0010011001124  00  >A Georgia/02/2009/05/04
A,02392, 0000000000000  0010011001124  00  >A Georgia/03/2009/05/04
A,02683, 0000000000000  0013030010014  00  >A Oregon/05/2009/04/29
A,00724, 0000000000000  0002000000001  00  >A Italy/145/2009//
A,02446, 0000000000000  0010021000114  00  >A Andalucia/GP286/2009/04/29
A,02446, 0000000000000  0010021000114  00  >A Andalucia/GP327/2009/05/01
A,01928, 0000000000000  0002010010003  00  >A Madrid/GP65/2009/04/26
A,04093, 0000000000000  0023031011136  00  >A Texas/37/2009/04/26
A,04093, 0000000000000  0023031011136  00  >A Texas/20/2009/04/25
A,02119, 0000000000000  0010011001124  00  >A Catalonia/50/2009/04/27
A,03669, 0000000000000  0013031011136  00  >A Catalonia/186/2009/05/
A,03642, 0000000000000  0013031011136  00  >A Catalonia/53/2009/05/
A,03659, 0000000000000  0013031011136  00  >A Catalonia/117/2009/05/01
A,03623, 0000000000000  0013031011136  00  >A Catalonia/127/2009/05/01
A,03688, 0000000000000  0013031011136  00  >A Catalonia/122/2009/05/01
A,03757, 0000000000000  0013031011136  00  >A Catalonia/48/2009/04/
A,03672, 0000000000000  0013031011136  00  >A Catalonia/385/2009/06/25
A,01690, 0000000000000  0010011001123  00  >A Catalonia/403/2009/06/30
A,01701, 0000000000000  0010011001123  00  >A Catalonia/458/2009/07/01
A,01688, 0000000000000  0010011001123  00  >A Catalonia/478/2009/07/02
A,01687, 0000000000000  0010011001123  00  >A Catalonia/479/2009/07/02
A,01699, 0000000000000  0010011001123  00  >A Catalonia/480/2009/07/02
A,01690, 0000000000000  0010011001123  00  >A Catalonia/518/2009/07/03
A,01693, 0000000000000  0010011001123  00  >A Catalonia/519/2009/07/03
A,01692, 0000000000000  0010011001123  00  >A Catalonia/521/2009/07/03
A,01690, 0000000000000  0010011001123  00  >A Catalonia/523/2009/07/03
A,03698, 0000000000000  0013031011136  00  >A Catalonia/386/2009/06/26
A,03666, 0000000000000  0013031011136  00  >A Catalonia/390/2009/06/29
A,01694, 0000000000000  0010011001123  00  >A Catalonia/522/2009/07/03
A,04093, 0000000000000  0023031011136  00  >A Texas/36/2009/04/29
A,00363, 0000000000000  0000000000000  00  >A Monterrey/2/2009/05/08
A,03751, 0000000000000  0131111013446  00  >A Arizona/07/2009/05/07
A,04093, 0000000000000  0023031011136  00  >A Texas/34/2009/05/12
A,13139, 0000000000000  026637317395;  00  >A Mexico/InDRE4114/2009//
A,13016, 0000000000000  025637317395;  00  >A Israel/644/2009/04/
A,06374, 0000000000000  0011141140504  00  >A Shanghai/143T/2009//
A,00624, 0000000000000  0002000000001  00  >A Italy/07/2009//
A,03111, 0000000000000  0023021011134  00  >A Virginia/05/2009/05/06
A,03459, 0000000000000  0022011011125  00  >A Stockholm/28/2009/04/30
A,01410, 0000000000000  0010001001122  00  >A Washington/17/2009/05/04
A,00558, 0000000000000  0001020000011  00  >A Mexico City/102/2009/05/02
A,03111, 0000000000000  0023021011134  00  >A Tennessee/07/2009/04/30
A,01121, 0000000000000  0001021000022  00  >A Mexico City/24/2009/05/02
A,01121, 0000000000000  0001021000022  00  >A Mexico City/28/2009/05/02
A,01121, 0000000000000  0001021000022  00  >A Mexico City/34/2009/05/02
A,01067, 0000000000000  0000010011113  00  >A Italy/54/2009/06/22
A,00514, 0000000000000  0000000000000  00  >A Paris/2604/2009/05/05
A,00461, 0000000000000  0000010000001  00  >A Catalonia/432/2009/07/01
A,01689, 0000000000000  0010011001123  00  >A Catalonia/408/2009/07/01
A,01689, 0000000000000  0010011001123  00  >A Catalonia/410/2009/07/01
A,01691, 0000000000000  0010011001123  00  >A Catalonia/496/2009/07/03
A,01689, 0000000000000  0010011001123  00  >A Catalonia/497/2009/07/03
A,03659, 0000000000000  0013031011136  00  >A Catalonia/362/2009/06/16
A,13139, 0000000000000  026637317395;  00  >A Mexico/InDRE13494/2009/04/29
A,01690, 0000000000000  0010011001123  00  >A Catalonia/423/2009/07/01
A,01690, 0000000000000  0010011001123  00  >A Catalonia/443/2009/07/01
A,01689, 0000000000000  0010011001123  00  >A Catalonia/456/2009/07/01
A,01691, 0000000000000  0010011001123  00  >A Catalonia/470/2009/07/01
A,01690, 0000000000000  0010011001123  00  >A Catalonia/405/2009/06/30
A,01703, 0000000000000  0010011001124  00  >A Catalonia/412/2009/07/01
A,01233, 0000000000000  0010001001122  00  >A Catalonia/414/2009/07/01
A,03677, 0000000000000  0013031011136  00  >A Catalonia/398/2009/06/29
A,01689, 0000000000000  0010011001123  00  >A Catalonia/551/2009/07/03
A,03111, 0000000000000  0023021011134  00  >A Michigan/05/2009/05/05
A,13128, 0000000000000  026637317395;  00  >A NY/3178/2009/04/28
A,03110, 0000000000000  0023021011134  00  >A Netherlands/602/2009/04/29
A,01701, 0000000000000  0013020010012  00  >A HK/01/2009/04/30
A,03083, 0000000000000  0023021011134  00  >A Perth/29/2009/05/26
A,01701, 0000000000000  0013020010012  00  >A CA/04/2009/06/05
A,00282, 0000000000000  0000000010000  00  >A Italy/08/2009/05/05
A,00273, 0000000000000  0000000010000  00  >A Italy/09/2009/05/08
A,00244, 0000000000000  0000000010000  00  >A Italy/03/2009/05/03
A,00463, 0000000000000  0000000010000  00  >A Toronto/3184/2009/04/
A,01121, 0000000000000  0001021000022  00  >A Mexico City/22/2009/05/02
A,01121, 0000000000000  0001020000022  00  >A Mexico City/59/2009/05/03
A,00616, 0000000000000  0000010000002  00  >A Rio de Janeiro/118/2009/05/05
A,00588, 0000000000000  0000010000002  00  >A Rio de Janeiro/125/2009/05/06
A,00622, 0000000000000  0000010000002  00  >A Minas Gerais/65/2009/04/27
A,00619, 0000000000000  0000010000002  00  >A Santa Catarina/296/2009/05/25
A,00478, 0000000000000  0000000010000  00  >A Toronto/3170/2009/04/
A,01410, 0000000000000  0010001001122  00  >A Texas/30/2009/05/05
A,02258, 0000000000000  0003030010014  00  >A Monterrey/1/2009/05/07
A,01694, 0000000000000  0010011001123  00  >A Catalonia/490/2009/07/03
A,01689, 0000000000000  0010011001123  00  >A Catalonia/417/2009/07/01
A,00282, 0000000000000  0000000010000  00  >A Italy/04/2009/05/03
B,03942, 0111100000000  0010021012337  12  >B Galicia/GP224/2009/04/29
B,04180, 0111100000000  0013030022237  12  >B Washington/07/2009/04/28
B,05590, 0111100000000  0023031023359  12  >B Ohio/09/2009/05/05
B,04608, 0111100000000  0023021023357  12  >B Ohio/10/2009/04/30
B,09877, 0222200000000  0043052053758  22  >B Mexico/4176/2009/04/13
B,04180, 0111100000000  0013030022237  12  >B Washington/12/2009/04/27
B,07726, 0111100000000  0033041043658  12  >B Illinois/01/2009/04/24
B,04891, 0111100000000  0012021022338  12  >B Valencia/GP154/2009/04/28
B,04891, 0111100000000  0012021022338  12  >B Andalucia/GP251/2009/04/29
B,01497, 0111100000000  0000000012223  12  >B Hawaii/08/2009/04/28
B,13123, 0223210000000  004316317395;  22  >B Mexico/4108/2009/04/02
B,04891, 0111100010000  0012021012338  12  >B CastillaLM/GP13/2009/04/26
B,04892, 0111100010000  0012021012338  12  >B Valencia/GP4/2009/04/26
B,05590, 0121100010000  0013031013359  12  >B Louisiana/04/2009/04/30
B,03198, 0112110000000  0012010022235  12  >B Mexico/4627/2009/04/20
B,03943, 0111100000000  0010021012337  12  >B CastillaLaMancha/GP369/2009/05/01
B,04278, 0111100000000  0012020022327  12  >B Madrid/GP62/2009/04/26
B,09883, 0222200000000  0044153153759  22  >B New Mexico/04/2009/04/26
B,04621, 0111100000000  0011121132525  12  >B Mexico/6882/2009/04/26
B,04180, 0121100000000  0003030022237  12  >B Washington/11/2009/04/26
B,04180, 0121100000000  0003030022237  12  >B Wisconsin/09/2009/04/27
B,04891, 0111100000000  0012021022338  12  >B Pais Vasco/GP20/2009/04/26
B,05590, 0111100000000  0023031023359  12  >B Texas/17/2009/04/24
B,05590, 0111100000000  0023031023359  12  >B Texas/28/2009/04/29
B,10988, 0111100000000  003416216385;  12  >B Minnesota/03/2009/04/
B,10982, 0111100000000  003416216385;  12  >B Minnesota/02/2009/04/27
B,10988, 0111100000000  003416216385;  12  >B Texas/07/2009/04/25
B,03751, 0111100000000  0020011013446  12  >B Texas/35/2009/05/08
B,05452, 0111100000000  0033031023458  12  >B Kentucky/05/2009/04/30
B,04180, 0111100000000  0013030022237  12  >B Oklahoma/02/2009/04/29
B,07870, 0111100000000  002414214355:  12  >B Mexico/4646/2009/04/20
B,13139, 0232200010000  003417316395;  22  >B Canada-QC/RV1595/2009//
B,13139, 0232200010000  003417316395;  22  >B Mexico/47N/2009/04/25
B,12295, 0222200000000  003416317385:  22  >B Florida/04/2009/04/27
B,10144, 0111100000000  002415216375:  12  >B Arizona/02/2009/04/26
B,13133, 0222200000000  004417317395;  22  >B Paris/2629/2009/05/11
B,09883, 0222200000000  0044153153759  22  >B Arizona/09/2009/05/19
B,13139, 0222200000000  004417317395;  22  >B Canada-SK/RV1798/2009//
B,13139, 0222200000000  004417317395;  22  >B Canada-SK/RV1793/2009//
B,03323, 0121100000000  0000020012326  12  >B Nevada/05/2009/04/29
B,13139, 0222200000000  004417317395;  22  >B Indiana/09/2009/04/22
C,02675, 0010000000000  0003030010014  16  >C CA/10/2009/04/08
C,01410, 0010000000000  0000001001122  16  >C Pennsylvania/08/2009/05/02
C,04093, 0010000010000  0013031001136  16  >C Louisiana/02/2009/04/29
C,02392, 0010000000000  0000011001124  16  >C Louisiana/01/2009/04/28
C,03981, 0010000000000  0004131130213  16  >C CA/18/2009/04/30
C,03111, 0020000000000  0003021011134  26  >C CA/11/2009/04/24
C,03111, 0020000000000  0003021011134  26  >C CA/20/2009/05/01
C,04608, 0131100000000  0003021023357  36  >C Arizona/06/2009/04/28
C,12295, 0252200000000  000416317385:  56  >C CA/05/2009/03/30
C,04093, 0020000000000  0003031011136  26  >C Colorado/04/2009/04/26
C,04093, 0020000000000  0003031011136  26  >C Hawaii/09/2009/04/30
C,12157, 0151100000000  0115263173959  56  >C Colorado/03/2009/04/27
C,07720, 0141100000000  0003041043658  46  >C Nebraska/02/2009/04/
C,06888, 0131100000000  0004132143558  36  >C Idaho/02/2009/04/28
C,05590, 0131100000000  0003031023359  36  >C South Dakota/04/2009/05/05
C,02392, 0010000000000  0000011001124  16  >C Sw/Alberta/OTH-33-25/2009/05/02
C,13139, 0262200000000  000417317395;  66  >C CA/06/2009/04/16
C,02392, 0010000000000  0000011001124  16  >C Sw/Alberta/OTH-33-14/2009/05/05
C,03111, 0010000010000  0013021001134  16  >C CA/19/2009/04/30
C,09485, 0030000000000  0004162151638  36  >C Paris/2650/2009/05/17
C,04093, 0020000000000  0003031011136  26  >C CA/12/2009/04/22
C,03111, 0020000000000  0003021011134  26  >C CA/17/2009/04/25
C,04608, 0131100000000  0003021023357  36  >C CA/13/2009/04/21
C,02392, 0010000000000  0000011001124  16  >C Sw/Alberta/OTH-33-22/2009/05/05
C,13139, 0262200000000  000417317395;  66  >C Sw/Alberta/OTH-33-8/2009//
C,04093, 0020000000000  0003031011136  26  >C Sw/Alberta/OTH-33-2/2009/05/03
C,04093, 0020000000000  0003031011136  26  >C Sw/Alberta/OTH-33-21/2009/05/05
C,04093, 0020000000000  0003031011136  26  >C Sw/Alberta/OTH-33-24/2009/05/03
C,04093, 0020000000000  0003031011136  26  >C Sw/Alberta/OTH-33-1/2009/05/03
C,04092, 0020000000000  0003031011136  26  >C Sw/Alberta/OTH-33-23/2009/05/03
C,04093, 0020000000000  0003031011136  26  >C Sw/Alberta/OTH-33-3/2009/05/03
C,04093, 0020000000000  0003031011136  26  >C Sw/Alberta/OTH-33-7/2009/05/05
D,09491, 0001010000000  0033152151638  16  >D Mexico/4108/2009/04/03
D,13139, 0226210000000  004016317395;  66  >D Maryland/05/2009/04/29
D,04093, 0003010000000  0020021011136  36  >D New Jersey/03/2009//
D,13139, 0226210000000  004016317395;  66  >D NY/1682/2009/04/27
D,04180, 0114110000000  0010020022237  46  >D Delaware/04/2009/04/28
D,04180, 0114110000000  0010020022237  46  >D Wash.DC/02/2009/04/29
D,13139, 0226210000000  004016317395;  66  >D NY/3100/2009/04/30
D,04180, 0114110000000  0010020022237  46  >D Wash.DC/03/2009/04/27
D,06882, 0114110000000  0020021043557  46  >D Delaware/03/2009/04/28
D,04608, 0114110000000  0020011023357  46  >D Delaware/08/2009/04/28
D,09883, 0226210000000  0040143153759  66  >D New Jersey/02/2009/04/
D,10865, 0226210000000  004015315375;  66  >D New Jersey/04/2009/04/
D,04093, 0003010000000  0020021011136  36  >D Delaware/06/2009/04/28
D,09162, 0115110000000  0020132163758  56  >D Delaware/02/2009/04/28
D,04093, 0003010000000  0020021011136  36  >D Delaware/07/2009/04/28
D,12295, 0226210000000  003015317385:  66  >D New Hampshire/02/2009/04/28
D,03111, 0003010000000  0020011011134  36  >D Delaware/05/2009/04/28
D,05590, 0113110000000  0021021023359  36  >D Missouri/02/2009/05/01
D,04093, 0002010000000  0021021011136  26  >D Oklahoma/03/2009/05/01
D,04093, 0002010000000  0021021011136  26  >D Florida/09/2009/05/01
D,03966, 0003010000000  0020021011136  36  >D Stockholm/29/2009/05/08
D,13131, 0226210000000  004016317395;  66  >D NY/3183/2009/04/28
D,13121, 0226210000000  004016317395;  66  >D NY/3099/2009/04/29
D,03111, 0001010000000  0022011011134  16  >D Mexico/3955/2009/04/02
E,13139, 0222300000000  004407317395;  33  >E NY/1669/2009/04/26
E,13129, 0222300000000  004407317395;  33  >E Hamburg/4/2009//
E,12998, 0222300000000  004407317395;  33  >E Brandenburg/19/2009/05/02
E,13139, 0222300000000  004407317395;  33  >E NY/3323/2009/05/06
E,12434, 0222300000000  004305317394:  33  >E Kansas/03/2009/04/24
E,09883, 0222300000000  0044053153759  33  >E Washington/09/2009/04/28
E,13085, 0222300000000  004407317395;  33  >E Washington/14/2009/05/07
E,13133, 0222300000000  004407317395;  33  >E GuangzhouSB/01/2009/05/17
E,13139, 0222300000000  004407317395;  33  >E GuangzhouSB/01/2009/05/18
E,13139, 0222300000000  004407317395;  33  >E Canada--S/RV1535/2009/04/24
E,13139, 0222300000000  004407317395;  33  >E Canada--S/RV1536/2009//
E,13139, 0222300000000  004407317395;  33  >E Canada--S/RV1538/2009//
E,12157, 0222300000000  0044063173959  33  >E Mexico/4269/2009/04/15
E,13139, 0222300000000  004407317395;  33  >E NY/3240/2009//
E,13116, 0222300000011  004407317394:  33  >E Mexico/4486/2009/04/14
E,13135, 0222300000000  004407317395;  33  >E Toronto/3141/2009/04/24
E,09046, 0222300000000  0021042162825  33  >E Missouri/04/2009/05/10
F,04180, 0001030000000  0123100022237  37  >F Texas/12/2009/04/24
F,05590, 0001030000000  0133101023359  37  >F Texas/10/2009/04/23
F,05590, 0001030000000  0133101023359  37  >F Texas/11/2009/04/23
F,13139, 0001070000000  026530317395;  77  >F Texas/05/2009/04/15
F,13139, 0001070000000  026530317395;  77  >F Texas/08/2009/04/24
F,13129, 0001070000000  026530317395;  77  >F Texas/04/2009/04/14
F,10988, 0001060000000  014420216385;  67  >F Texas/06/2009/04/23
F,11313, 0001050000000  0255303173858  57  >F North Carolina/05/2009/04/28
F,12157, 0001060000000  0265303173959  67  >F Kansas/02/2009/04/24
F,13133, 0001070000000  026530317395;  77  >F Texas/09/2009/04/25
F,10988, 0001060000000  014420216385;  67  >F Texas/22/2009/04/26
F,06322, 0001040000000  0134201142537  47  >F Oklahoma/01/2009/04/28
G,02870, 0000001000000  0013020011134  13  >G Catalonia/154/2009/04/
G,13139, 0000003000000  026637017395;  33  >G CA/07/2009/04/09
G,13139, 0000003000000  026637017395;  33  >G CA/08/2009/04/09
G,13133, 0000003000000  026637017395;  33  >G CA/04/2009/04/01
G,03385, 0000001000000  0022010011125  13  >G CA/09/2009/04/15
G,04093, 0000001000000  0023030011136  13  >G Pennsylvania/09/2009/04/30
G,13139, 0000003000000  026637017395;  33  >G Fukuoka-C/3/2009//
G,13139, 0000003000000  026637017395;  33  >G Fukuoka-C/2/2009//
G,13139, 0000003000000  026637017395;  33  >G Fukuoka-C/1/2009//
G,13139, 0000003000000  026637017395;  33  >G Kagoshima/1/2009//
G,13139, 0000003000000  026637017395;  33  >G Texas/15/2009/04/15
G,13139, 0000003000000  026637017395;  33  >G NY/3307/2009/05/01
G,01121, 0000001000000  0001020000022  13  >G Mexico City/33/2009/05/02
G,07603, 0000001010000  0265241023558  13  >G Illinois/04/2009/05/23
H,13139, 0000000120000  026637305395;  11  >H Beijing/01/2009/05/16
H,13133, 0000000120000  026637305395;  11  >H Beijing/01/2009/05/15
H,12157, 0000000120000  0266363053959  11  >H Tennessee/05/2009/04/28
H,13139, 0000000120000  026637305395;  11  >H Narita/1/2009/05/08
H,13133, 0000000120000  026637305395;  11  >H Beijing/4/2009/05/23
H,12904, 0111100140000  015526302395;  11  >H Bayern/62/2009/04/29
H,13139, 0000000110001  026637306395:  11  >H Canada-SK/RV1767/2009//
H,13139, 0000000110001  026637306395:  11  >H Canada-MB/RV1975/2009//
H,13139, 0000000110001  026637306395:  11  >H Canada-MB/RV2018/2009//
H,13133, 0000000110000  026637306395;  11  >H Arizona/01/2009/04/22
H,13139, 0000000110000  026637306395;  11  >H Mexico/InDRE13495/2009/04/29
H,09883, 0000000120000  0266353033759  11  >H Arkansas/03/2009/05/07
H,13133, 0000000140000  026637303395;  11  >H Sichuan/1/2009/05/10
H,13133, 0000000130000  026637304395;  11  >H Zhejiang/DTID-ZJU01/2009/06/
H,13136, 0000000140000  026637303395;  11  >H Santo Domingo/572N/2009/05/24
H,13136, 0000000140000  026637303395;  11  >H Santo Domingo/0573N/2009/05/24
H,13135, 0000000120000  026637305395;  11  >H Toronto/0462/2009/05/26
H,13135, 0000000110000  026637306395;  11  >H Paris/2573/2009/04/29
H,11993, 0000000110000  0256372062839  11  >H Paris/2590/2009/04/30
H,06685, 0000000110000  0142233021524  11  >H Alabama/02/2009/04/27
I,01251, 0000000010000  0002001000001  17  >I Colombia/08/2009/04/25
I,04733, 0000000010000  0131121003448  17  >I Missouri/01/2009/04/27
I,03942, 0000000010000  0121121002337  17  >I Madrid/GP193/2009/04/28
I,04892, 0000000020000  0123121002338  27  >I CastillaLM/GP9/2009/04/26
I,01930, 0000000010000  0002010000003  17  >I CastillaLaMancha/GP181/2009/04/28
I,03393, 0000000010000  0012021000115  17  >I Andalucia/GP230/2009/04/29
I,03494, 0000000010001  0023040000114  17  >I Israel/277/2009/04/
I,02893, 0000000010000  0013021001134  17  >I Catalonia/148/2009/04/
I,04608, 0000000020000  0134121003357  27  >I South Dakota/05/2009/04/30
I,02774, 0000000010001  0012020000103  17  >I Baleares/GP500/2009/05/08
I,05590, 0000000020000  0134131003359  27  >I Missouri/03/2009/05/04
I,00916, 0000000010001  0002000000000  17  >I Italy/106/2009/06/24
I,13139, 0000000170000  026637300395;  77  >I England/195/2009/04/28
I,13139, 0000000170000  026637300395;  77  >I NY/3181/2009/04/28
I,13135, 0000000170000  026637300395;  77  >I Paris/2580/2009/04/30
I,13139, 0000000170000  026637300395;  77  >I NY/3177/2009/05/02
I,10982, 0000000160000  014526200385;  67  >I South Carolina/09/2009/04/26
I,13119, 0111100150000  015527302395;  57  >I Regensburg/D6/2009//
I,00909, 0000000010000  0002000000001  17  >I Italy/06/2009/05/
I,04093, 0000000010000  0023031001136  17  >I South Carolina/10/2009/04/26
I,04892, 0000000020000  0123121002338  27  >I Murcia/GP78/2009/04/27
I,04891, 0000000020000  0123121002338  27  >I CastillaLaMancha/GP248/2009/04/29
I,13020, 0000000160000  026637300395;  67  >I Norway/1168/2009/05/07
I,03111, 0000000010000  0023021001134  17  >I Pennsylvania/10/2009/04/28
I,04093, 0000000010000  0023031001136  17  >I Indiana/12/2009/04/29
I,03084, 0000000010000  0023021001134  17  >I Philippines/01/2009/05/20
I,12953, 0000000160000  025637300395;  67  >I Norway/1177/2009/05/08
I,11993, 0000000170000  0256372002839  77  >I Paris/2592/2009/05/01
I,11723, 0000000150001  0256372022838  57  >I Paris/2709/2009/06/02
I,02462, 0000000010000  0003030000014  17  >I Catalonia/317/2009/05/28
I,02333, 0000000010000  0022001001123  17  >I Chile/9113/2009/05/19
I,04093, 0000000010000  0023031001136  17  >I Kaluga/01/2009/05/22
I,00280, 0000000010000  0000000000000  17  >I Italy/02/2009/04/30
J,01497, 0000000002223  0111100010000  23  >J Connecticut/01/2009/04/27
J,09046, 0000000002225  0243342160600  23  >J Michigan/06/2009/05/02
J,11438, 0000000003349  0253353160600  33  >J NY/15/2009/04/25
J,01039, 0000000001113  0000010010000  13  >J Italy/20/2009/06/07
J,03198, 0000000002233  0124120020002  23  >J Oregon/04/2009/04/27
J,06193, 0000000002233  0255241030203  23  >J Mexico/4283/2009/04/15
J,03751, 0000000003344  0131111010102  33  >J Pennsylvania/06/2009/04/29
J,13133, 0000000003339  0266373170622  33  >J Shanghai/71T/2009/05/31
J,03942, 0000000002236  0121121010101  23  >J Madrid/GP523/2009/05/13
J,04042, 0000000002236  0134130020100  23  >J West Virginia/01/2009/05/24
J,05024, 0000000002233  0134140020105  23  >J Wisconsin/08/2009/04/27
J,05024, 0000000002233  0134140020105  23  >J Texas/19/2009/04/26
J,02479, 0000000002222  0111110010003  23  >J Mexico/4516/2009/04/25
J,09448, 0000000003344  0254343140405  33  >J Nonthaburi/102/2009//
J,03942, 0000000002233  0121121010104  23  >J Valencia/GP278/2009/04/29
J,11312, 0000000003344  0256353170503  33  >J Mexico/4635/2009/04/20
J,05590, 0000000003344  0134131020015  33  >J Louisiana/03/2009/05/01
J,05024, 0001000002223  0133140020115  23  >J Moscow/226/2009//
J,13133, 0000000003433  0266373170528  33  >J Korea/01/2009/05/02
J,13139, 0000000003344  0266373170617  33  >J Italy/127/2009/06/17
J,03943, 0000000002236  0121121010101  23  >J Valencia/GP272/2009/04/29
J,13057, 0000100033347  0266263140614  33  >J Israel/276/2009/04/
J,11991, 0000000002233  0256372170606  23  >J Paris/2591/2009/05/01
J,13139, 0000000001111  026637317284:  13  >J Mexico/InDRE13547/2009/04/27
J,13134, 0111100002233  0155273171728  23  >J Italy/05/2009/05/03
K,13139, 0000000003933  0266373170028  99  >K Amagasaki/2/2009//
K,13139, 0000000003933  0266373170028  99  >K Himeji/1/2009//
K,13139, 0000000003933  0266373170028  99  >K Osaka-C/1/2009/05/16
K,13139, 0000000003933  0266373170028  99  >K Osaka-C/2/2009/05/17
K,13139, 0000000003933  0266373170028  99  >K Osaka/2/2009/05/16
K,13139, 0000000003933  0266373170028  99  >K Amagasaki/1/2009//
K,13139, 0000000003933  0266373170028  99  >K Sakai/1/2009//
K,13139, 0000000003933  0266373170028  99  >K Sakai/2/2009//
K,13139, 0000000003933  0266373170028  99  >K Shiga/2/2009//
K,13139, 0000000003933  0266373170028  99  >K Hyogo/1/2009/05/17
K,13139, 0000000003933  0266373170028  99  >K Osaka/1/2009/05/16
K,13139, 0000000003933  0266373170028  99  >K Osaka/180/2009//
K,13139, 0000000003933  0266373170028  99  >K Hyogo/2/2009/05/17
K,13139, 0000000003933  0266373170028  99  >K Kobe/1/2009//
L,01121, 0000000000011  0001021000011  15  >L Mexico City/1/2009/05/01
L,01121, 0000000000011  0001021000011  15  >L Mexico City/9/2009/05/01
L,00563, 0000000000011  0000001000000  15  >L Mexico City/44/2009/05/03
L,01121, 0000000000011  0001021000011  15  >L Mexico City/45/2009/05/03
L,01121, 0000000000011  0001021000011  15  >L Mexico City/66/2009/05/05
L,01121, 0000000000022  0001021000000  25  >L Mexico City/16/2009/05/01
L,01121, 0000000000022  0001021000000  25  >L Mexico City/17/2009/05/01
L,01121, 0000000000022  0001021000000  25  >L Mexico City/4/2009/05/01
L,00558, 0000000000011  0001020000000  15  >L Mexico City/100/2009/05/02
L,01121, 0000000000022  0001021000000  25  >L Mexico City/26/2009/05/02
L,00558, 0000000000011  0001020000000  15  >L Mexico City/37/2009/05/02
L,00558, 0000000000011  0001020000000  15  >L Mexico City/38/2009/05/02
L,01121, 0000000000022  0001021000000  25  >L Mexico City/39/2009/05/02
L,00558, 0000000000011  0001020000000  15  >L Mexico City/41/2009/05/02
L,00558, 0000000000011  0001020000000  15  >L Mexico City/42/2009/05/02
L,00558, 0000000000011  0001020000000  15  >L Mexico City/86/2009/05/02
L,00558, 0000000000011  0001020000000  15  >L Mexico City/87/2009/05/02
L,00558, 0000000000011  0001020000000  15  >L Mexico City/90/2009/05/02
L,00558, 0000000000011  0001020000000  15  >L Mexico City/92/2009/05/02
L,00558, 0000000000011  0001020000000  15  >L Mexico City/94/2009/05/02
L,00558, 0000000000011  0001020000000  15  >L Mexico City/96/2009/05/02
L,00558, 0000000000011  0001020000000  15  >L Mexico City/97/2009/05/02
L,00558, 0000000000011  0001020000000  15  >L Mexico City/98/2009/05/02
L,00558, 0000000000011  0001020000000  15  >L Mexico City/99/2009/05/02
L,01121, 0000000000022  0001021000000  25  >L Mexico City/48/2009/05/03
L,00558, 0000000000011  0001020000000  15  >L Mexico City/50/2009/05/03
L,01121, 0000000000022  0001021000000  25  >L Mexico City/53/2009/05/03
L,01121, 0000000000022  0001021000000  25  >L Mexico City/55/2009/05/03
L,00558, 0000000000011  0001020000000  15  >L Mexico City/63/2009/05/03
L,01121, 0000000000022  0001021000000  25  >L Mexico City/64/2009/05/03
L,01121, 0000000000022  0001021000000  25  >L Mexico City/105/2009/05/04
L,01121, 0000000000022  0001021000000  25  >L Mexico City/69/2009/05/04
L,00558, 0000000000011  0001020000000  15  >L Mexico City/71/2009/05/04
L,01121, 0000000000022  0001021000000  25  >L Mexico City/73/2009/05/04
L,01121, 0000000000022  0001021000000  25  >L Mexico City/65/2009/05/05
L,00558, 0000000000011  0001020000000  15  >L Mexico City/74/2009/05/05
L,00558, 0000000000011  0001020000000  15  >L Mexico City/76/2009/05/05
L,00558, 0000000000011  0001020000000  15  >L Mexico City/77/2009/05/05
L,00558, 0000000000011  0001020000000  15  >L Mexico City/78/2009/05/05
L,00558, 0000000000011  0001020000000  15  >L Mexico City/79/2009/05/05
L,00558, 0000000000011  0001020000000  15  >L Mexico City/81/2009/05/05
L,01121, 0000000000022  0001021000000  25  >L Mexico City/11/2009/05/01
L,00563, 0000000000011  0000001000000  15  >L Mexico City/15/2009/05/01
L,01121, 0000000000022  0001021000000  25  >L Mexico City/13/2009/05/01
L,01701, 0000000000012  0013020010000  15  >L NY/30/2009/04/
L,01701, 0000000000012  0013020010000  15  >L NY/26/2009/04/24
L,01701, 0000000000012  0013020010000  15  >L Utah/02/2009/04/28
L,01687, 0000000000012  0013020010000  15  >L Philippines/03/2009/05/25
L,01701, 0000000000012  0013020010000  15  >L Moscow/03/2009/06/04
L,01701, 0000000000012  0013020010000  15  >L NY/04/2009/04/
L,01121, 0000000000011  0001021000011  15  >L Mexico City/75/2009/05/05
L,00811, 0000000000011  0000001000000  15  >L Dublin/03/2009/05/26
L,00796, 0000000000011  0000001000000  15  >L Dublin/05/2009/05/31
L,00797, 0000000000011  0000001000000  15  >L Dublin/09/2009/06/02
L,03561, 0000000001122  0131112010100  25  >L Utah/03/2009/05/15
L,01410, 0000000001122  0010001000000  25  >L Shanghai/60T/2009//
L,01410, 0000000001122  0010001000000  25  >L Ohio/11/2009/04/
L,01410, 0000000001122  0010001000000  25  >L Massachusetts/09/2009/05/10
L,00838, 0000000001122  0000001000000  25  >L Dublin/02/2009/05/25
L,00825, 0000000001122  0000001000000  25  >L Dublin/04/2009/05/29
L,01235, 0000000001122  0010001000000  25  >L Catalonia/482/2009/07/03
L,01235, 0000000001122  0010001000000  25  >L Catalonia/483/2009/07/03
L,02333, 0000000001123  0022001010000  25  >L Chile/8947/2009/05/17
L,02333, 0000000001123  0022001010000  25  >L Chile/8886/2009/05/18
L,02333, 0000000001123  0022001010000  25  >L Chile/8949/2009/05/18
L,01957, 0000001001123  0011000000000  25  >L Athens/968/2009/06/15
L,09789, 0000000001135  0145253160500  35  >L Tennessee/1-560/2009/05/01
L,03111, 0000000001134  0023021010000  35  >L Texas/39/2009/05/22
L,03111, 0000000001134  0023021010000  35  >L Utah/10/2009/06/05
L,03111, 0000000001134  0023021010000  35  >L Firenze/10/2009/06/06
L,03111, 0000000001134  0023021010000  35  >L NY/14/2009/04/
L,01701, 0000000000012  0013020010000  15  >L NY/05/2009/04/
L,11313, 0000000003358  0256353170500  55  >L New Jersey/01/2009/04/
L,10006, 0000000003359  0145252160500  55  >L NY/09/2009/04/25
L,04608, 0000000003357  0134121020000  55  >L Massachusetts/07/2009/04/25
L,05452, 0000000003358  0144131020100  55  >L Montana/07/2009/05/04
L,02254, 0000000001123  0020011000100  25  >L Stockholm/30/2009/05/26
L,02254, 0000000001123  0020011000100  25  >L Stockholm/42/2009/06/06
L,02254, 0000000001123  0020011000100  25  >L Stockholm/38/2009/06/09
L,04608, 0000000003357  0134121020000  55  >L NY/37/2009/04/25
L,04093, 0000000001136  0023031010000  35  >L NY/24/2009/04/24
L,10859, 000000000335:  0265262050400  55  >L NY/19/2009/04/25
L,05590, 0000000003359  0134131020000  55  >L NY/39/2009/04/25
L,02392, 0000000001124  0010011000000  25  >L Arizona/05/2009/04/26
L,03661, 0000000001136  0013031010000  35  >L Catalonia/366/2009/06/18
L,01689, 0000000001123  0010011000000  25  >L Catalonia/467/2009/07/01
L,01691, 0000000001123  0010011000000  25  >L Catalonia/475/2009/07/02
L,01687, 0000000001123  0010011000000  25  >L Catalonia/498/2009/07/03
L,01688, 0000000001123  0010011000000  25  >L Catalonia/503/2009/07/03
L,01687, 0000000001123  0010011000000  25  >L Catalonia/510/2009/07/03
L,03111, 0000000001134  0023021010000  35  >L Distrito Federal/2611/2009/06/05
L,07864, 0000000003359  0134141040200  55  >L Wash.DC/01/2009/04/27
L,03085, 0000000001135  0013031000001  35  >L Istanbul/30/2009/05/14
L,01701, 0000000000012  0013020010000  15  >L CA/24/2009/05/29
L,04093, 0000000001136  0023031010000  35  >L NY/08/2009/04/25
L,04093, 0000000001136  0023031010000  35  >L NY/45/2009/04/25
L,03669, 0000000001136  0013031010000  35  >L Catalonia/394/2009/06/29
L,04093, 0000000001136  0023031010000  35  >L Ohio/08/2009/04/27
L,04024, 0000000001136  0023031010000  35  >L Brisbane/17/2009/05/07
L,03111, 0000000001134  0023021010000  35  >L NY/57/2009/05/08
L,13139, 000000000335:  0266373170600  55  >L Canada-ON/RV1526/2009//
L,03111, 0000000001133  0023021010001  35  >L Mexico/4575/2009/04/20
L,03111, 0000000001133  0023021010001  35  >L Wisconsin/07/2009/04/27
L,01410, 0000000001122  0010001000000  25  >L Illinois/02/2009/04/30
L,03111, 0000000001133  0023021010001  35  >L Wisconsin/12/2009/05/07
L,04608, 0000000003355  0134121020002  55  >L Wisconsin/11/2009/05/04
L,01701, 0000000000011  0013020010001  15  >L Texas/31/2009/05/12
L,03111, 0000000001134  0023021010000  35  >L NY/34/2009/04/25
L,01692, 0000000001123  0010011000000  25  >L Catalonia/442/2009/07/01
L,01690, 0000000001123  0010011000000  25  >L Catalonia/502/2009/07/03
L,01689, 0000000001123  0010011000000  25  >L Catalonia/517/2009/07/03
L,01690, 0000000001123  0010011000000  25  >L Catalonia/476/2009/07/02
L,03083, 0000000001134  0023021010000  35  >L Victoria/04/2009/05/21
L,01701, 0000000000012  0013020010000  15  >L NY/28/2009/04/
L,04093, 0000000001136  0023031010000  35  >L NY/16/2009/04/24
L,01701, 0000000000012  0013020010000  15  >L Moscow/02/2009/05/26
L,13133, 0000000002248  0266373171713  45  >L Guangdong/03/2009/05/29
L,13133, 000000000335:  0266373170600  55  >L Shanghai/1/2009/05/23
L,01696, 0000000001123  0010011000000  25  >L Catalonia/481/2009/07/03
L,05590, 0000000003359  0134131020000  55  >L NY/33/2009/04/25
L,01688, 0000000001123  0010011000000  25  >L Catalonia/500/2009/07/03
L,04608, 0000000003357  0134121020000  55  >L Utah/04/2009/05/31
L,01688, 0000000001123  0010011000000  25  >L Catalonia/508/2009/07/03
L,01410, 0000000001122  0010001000000  25  >L Michigan/10/2009/06/03
L,00841, 0000000001122  0000001000000  25  >L Dublin/06/2009/06/01
L,00839, 0000000001122  0000001000000  25  >L Dublin/07/2009/06/01
L,00825, 0000000001122  0000001000000  25  >L Dublin/08/2009/06/03
L,00825, 0000000001122  0000001000000  25  >L Dublin/10/2009/06/04
L,12157, 0000000003359  0266363170600  55  >L Nebraska/03/2009/04/27
L,03111, 0000000001134  0023021010000  35  >L Yamaguchi/22/2009//
L,04093, 0000000001136  0023031010000  35  >L Texas/32/2009/05/11
L,03975, 0000000000011  0013030030201  15  >L Mexico/4502/2009/04/17
L,03111, 0000000001122  0023021010012  25  >L Mexico/4593/2009/04/20
L,03111, 0000000001134  0023021010000  35  >L NY/17/2009/04/
L,03111, 0000000001134  0023021010000  35  >L NY/27/2009/04/
L,07732, 0000000003359  0145242140300  55  >L Virginia/04/2009/04/27
L,03650, 0000000001136  0013031000000  35  >L Catalonia/387/2009/06/26
L,06244, 0000000001136  0144142020100  35  >L Rhode Island/04/2009/06/01
L,03662, 0000000001136  0013031010000  35  >L Catalonia/399/2009/06/29
L,04608, 0000000003357  0134121020000  55  >L NY/58/2009/05/23
L,03083, 0000000001134  0023021010000  35  >L Philippines/2009/2009/05/23
L,03083, 0000000001134  0023021010000  35  >L Darwin/01/2009/05/29
L,04079, 0000000001136  0023031010000  35  >L South AUS/01/2009/05/
L,02948, 0000000001124  0011011000001  25  >L Athens/992/2009/06/16
L,02392, 0000000001122  0010011000002  25  >L Massachusetts/10/2009/05/03
L,03111, 0000000001134  0023021010000  35  >L Mato Grosso/2329/2009/05/28
L,03666, 0000000001136  0013031010000  35  >L Catalonia/360/2009/06/15
L,03663, 0000000001136  0013031010000  35  >L Catalonia/308/2009/05/25
L,00558, 0000000000011  0001020000000  15  >L Mexico City/60/2009/05/03
L,09883, 0000000003359  0266353150400  55  >L Kentucky/07/2009/05/04
L,04608, 0000000003357  0134121020000  55  >L NY/35/2009/04/25
L,06234, 0000000001133  0034142130303  35  >L Mexico/4595/2009/04/20
L,04092, 0000000001133  0023031010003  35  >L Sao Paulo/1454/2009/04/29
L,04093, 0000000001133  0023031010003  35  >L Florida/11/2009/04/30
L,04005, 0000000001133  0023031010003  35  >L Auckland/3/2009/04/25
L,02683, 0000000000011  0013030010003  15  >L Massachusetts/08/2009/05/07
L,01701, 0000000000011  0013020010001  15  >L Sao Paulo/2233/2009/05/27
L,04093, 0000000001133  0023031010003  35  >L Rhode Island/03/2009/04/30
L,04093, 0000000001133  0023031010003  35  >L Maine/03/2009/05/09
L,05452, 0000000003355  0144131020103  55  >L Vermont/03/2009/05/04
L,08575, 0000000003355  0265252030205  55  >L Finland/555/2009/05/28
L,02392, 0000000001122  0010011000002  25  >L Massachusetts/11/2009/05/11
L,10855, 0000000003355  0266363150406  55  >L Finland/554/2009/05/26
L,04093, 0000000001133  0023031010003  35  >L Sao Paulo/2303/2009/06/01
L,05590, 0000000003355  0134131020004  55  >L Wisconsin/10/2009/05/04
L,04608, 0000000003355  0134121020002  55  >L Alaska/04/2009/05/
L,13139, 0000000003355  0266373170606  55  >L THA/104/2009/05/06
L,13139, 0000000003355  0266373170606  55  >L Nonthaburi/102/2009/05/
L,02317, 0000000001122  0013011000001  25  >L Nonthaburi/104/2009/05/10
L,10849, 0000000003355  0265262050405  55  >L Mexico/4482/2009/04/14
L,13138, 0000000002244  0266373170606  45  >L Mexico/4603/2009/04/19
L,13139, 0000000003355  0266373170606  55  >L Mexico/4604/2009/04/19
L,13139, 0000000003355  0266373170606  55  >L Canada-QC/RV1954/2009//
L,02683, 0000000000011  0013030010003  15  >L Kentucky/06/2009/05/04
L,13133, 0000000003355  0266373170606  55  >L Beijing/3/2009/05/20
L,13123, 0000000002244  0266373171717  45  >L Beijing/502/2009/05/20
L,13133, 0000010003355  0266363170606  55  >L Beijing/501/2009/05/21
L,13139, 0000000003355  0266373170606  55  >L Utsunomiya/1/2009//
L,13139, 0000000003355  0266373170606  55  >L Utsunomiya/2/2009//
L,04093, 0000000001133  0023031010003  35  >L Louisiana/05/2009/05/01
L,05452, 0000000003355  0144131020103  55  >L North Dakota/04/2009/05/11
L,13139, 0000000003355  0266373170606  55  >L Mexico/InDRE13551/2009/04/28
L,04053, 0000000000022  0023031011114  25  >L Auckland/4/2009/04/
L,13139, 0000000003355  0266373170606  55  >L Mexico/InDRE13555/2009/04/29
L,04895, 0000000001133  0033041010104  35  >L Israel/70/2009/04/
L,02391, 0000000001122  0010011000002  25  >L Texas/33/2009/05/12
L,03454, 0000000000011  0013021011125  15  >L Catalonia/397/2009/06/29
L,13139, 0000000003355  0266373170606  55  >L Rhode Island/02/2009/04/28
L,13139, 0000000003355  0266373170606  55  >L NY/3337/2009/05/04
L,13139, 0000000003355  0266373170606  55  >L Canada-MB/RV2013/2009//
L,13139, 0000000003355  0266373170606  55  >L Canada-MB/RV1977/2009//
L,13139, 0000000003355  0266373170606  55  >L Canada-MB/RV2020/2009//
L,13139, 0000000003355  0266373170606  55  >L Canada-MB/RV1964/2009//
L,13133, 0000000003355  0266373170606  55  >L Shandong/1/2009/05/10
L,13139, 0000000003355  0266373170606  55  >L Canada-MB/RV1982/2009//
L,13139, 0000000003355  0266373170606  55  >L Canada-MB/RV2023/2009//
L,08075, 0000000000011  0024161150505  15  >L Paris/2722/2009/06/02
L,13139, 0000000003355  0266373170606  55  >L NY/3348/2009/04/28
L,13139, 0000000003355  0266373170606  55  >L NY/3352/2009/05/06
L,13139, 0000000003355  0266373170606  55  >L Tokushima/1/2009//
L,13139, 0000000003355  0266373170606  55  >L Iowa/04/2009/04/24
L,13133, 0000000003356  0266373170605  55  >L Michigan/02/2009/04/26
L,10988, 0000000003355  0145262160506  55  >L Texas/23/2009/04/27
L,01701, 0000000000012  0013020010000  15  >L Puerto Montt/Bio87/2009/06/19
L,01121, 0000000000022  0001021000000  25  >L Mexico City/18/2009/05/01
L,01121, 0000000000022  0001021000000  25  >L Mexico City/5/2009/05/01
L,01121, 0000000000022  0001021000000  25  >L Mexico City/31/2009/05/02
L,01121, 0000000000022  0001021000000  25  >L Mexico City/40/2009/05/02
L,01121, 0000000000011  0001021000011  15  >L Mexico City/46/2009/05/03
L,01121, 0000000000011  0001021000011  15  >L Mexico City/6/2009/05/01
L,01121, 0000000000011  0001021000011  15  >L Mexico City/67/2009/05/05
L,01121, 0000000000022  0001021000000  25  >L Mexico City/49/2009/05/03
L,01121, 0000000000022  0001021000000  25  >L Mexico City/57/2009/05/03
L,01121, 0000000000022  0001021000000  25  >L Mexico City/58/2009/05/03
L,01121, 0000000000022  0001021000000  25  >L Mexico City/61/2009/05/03
L,02231, 0000000001123  0020011000100  25  >L Stockholm/37/2009/06/06
L,01701, 0000000000011  0013020010001  15  >L Nanjing/1/2009/06/18
L,12060, 0000000003355  0256363170505  55  >L Auckland/1/2009/04/25
L,03975, 0000000000012  0013030030200  15  >L Castro/JXP/2009/06/11
L,13138, 0000000003355  0266373170606  55  >L Shiga/1/2009//
L,13139, 0000000003355  0266373170606  55  >L NY/3351/2009/05/06
L,01701, 0000000000011  0013020010001  15  >L Milan/UHSR1/2009/05/21
L,01121, 0000000000011  0000011000011  15  >L Mexico City/20/2009/05/01
L,01121, 0000000000011  0001021000011  15  >L Mexico City/54/2009/05/03
L,00563, 0000000000011  0000001000000  15  >L Mexico City/47/2009/05/03
L,01121, 0000000000022  0001021000000  25  >L Mexico City/70/2009/05/04
L,03855, 0000000001135  0033031010100  35  >L Stockholm/35/2009/06/01
L,04063, 0000000001136  0023031010000  35  >L HK/2369/2009/06/11
L,02003, 0000000001133  0011021000000  35  >L Poland/37/2009/05/05
L,00805, 0000000000011  0000001000000  15  >L Dublin/11/2009/06/29
L,00825, 0000000001122  0000001000000  25  >L Dublin/12/2009/06/30
L,01701, 0000000000011  0013020010001  15  >L Singapore/TLL01/2009/06/30
L,02288, 0000000001122  0013011000001  25  >L Nonthaburi/102/2009/05/06
L,03090, 0000000001134  0023021010000  35  >L Victoria/01/2009/05/19
M,06705, 0000000000001  0122232150500  1;  >M Nevada/03/2009/04/26
M,00654, 0000000000001  0002000000000  1;  >M Italy/209/2009//
M,00600, 0000000000001  0002000000000  1;  >M Italy/44/2009//
M,00714, 0000000000001  0002000000000  1;  >M Italy/60/2009//
M,00561, 0000000000001  0002000000000  1;  >M Toronto/3145/2009/04/
M,00544, 0000000000001  0002000000000  1;  >M Toronto/3146/2009/04/
M,00579, 0000000000001  0001000000000  1;  >M Athens/918/2009/06/11
M,00660, 0000000000001  0001000000000  1;  >M Athens/919/2009/06/11
M,00650, 0000000000001  0001000000000  1;  >M Athens/939/2009/06/12
M,00602, 0000000000001  0001000000000  1;  >M Athens/996/2009/06/16
M,00763, 0000000000001  0002000000000  1;  >M Italy/104/2009/06/24
M,00913, 0000000000001  0002000010000  1;  >M Italy/83/2009/06/
M,00908, 0000000000001  0002000010000  1;  >M Italy/82/2009/06/
M,00906, 0000000000001  0002000010000  1;  >M Italy/43/2009/06/03
M,00903, 0000000000001  0002000010000  1;  >M Italy/45/2009/06/05
M,00891, 0000000000001  0002000010000  1;  >M Italy/47/2009/06/05
M,00903, 0000000000001  0002000010000  1;  >M Italy/48/2009/06/05
M,00976, 0000000000001  0002000010000  1;  >M Italy/50/2009/06/08
M,00659, 0000000000001  0001000010000  1;  >M Athens/920/2009/06/11
M,00926, 0000000000001  0002000010000  1;  >M Italy/126/2009/06/30
M,13136, 000000000335;  0266373170600  ;;  >M NY/3149/2009//
M,13139, 000000000335;  0266373170600  ;;  >M NY/3201/2009//
M,13133, 000000000335;  0266373170600  ;;  >M NY/3218/2009//
M,13130, 000000000335;  0266373170600  ;;  >M NY/3220/2009//
M,13130, 000000000335;  0266373170600  ;;  >M NY/3219/2009//
M,13133, 000000000335;  0266373170600  ;;  >M NY/3221/2009//
M,13124, 000000000335;  0266373170600  ;;  >M NY/3222/2009//
M,13127, 000000000335;  0266373170600  ;;  >M NY/3231/2009//
M,13127, 000000000335;  0266373170600  ;;  >M NY/3242/2009//
M,13139, 000000000335;  0266373170600  ;;  >M NY/3243/2009//
M,13136, 000000000335;  0266373170600  ;;  >M NY/3255/2009//
M,13139, 000000000335;  0266373170600  ;;  >M NY/3252/2009//
M,13139, 000000000335;  0266373170600  ;;  >M NY/3257/2009//
M,13136, 000000000335;  0266373170600  ;;  >M NY/3253/2009//
M,13139, 000000000335;  0266373170600  ;;  >M NY/22/2009/04/24
M,13139, 000000000335;  0266373170600  ;;  >M NY/31/2009/04/24
M,13139, 000000000335;  0266373170600  ;;  >M NY/3209/2009/04/25
M,13139, 000000000335;  0266373170600  ;;  >M NY/3210/2009/04/24
M,10865, 000000000335;  0266363150400  ;;  >M NY/3215/2009/04/25
M,13133, 000000000335;  0266373170600  ;;  >M CA/14/2009/04/25
M,13139, 000000000335;  0266373170600  ;;  >M NY/06/2009/04/25
M,13139, 000000000335;  0266373170600  ;;  >M NY/3186/2009/04/26
M,13139, 000000000335;  0266373170600  ;;  >M NY/10/2009/04/25
M,13139, 000000000335;  0266373170600  ;;  >M NY/3206/2009/04/26
M,13139, 000000000335;  0266373170600  ;;  >M NY/3002/2009/04/25
M,13133, 000000000335;  0266373170600  ;;  >M NY/3202/2009//
M,00891, 0000000000002  0000010000000  2;  >M Catalonia/329/2009/06/03
M,00558, 0000000000002  0000010000000  2;  >M Stockholm/45/2009/06/11
M,01538, 0000000000003  0001010000000  3;  >M Larisa/1002/2009/06/14
M,01801, 0000000001114  0002010010000  4;  >M Italy/52/2009/06/17
M,00892, 0000000000002  0000010000000  2;  >M Catalonia/377/2009/06/23
M,00899, 0000000000002  0000010000000  2;  >M Catalonia/379/2009/06/23
M,00892, 0000000000002  0000010000000  2;  >M Catalonia/382/2009/06/23
M,00455, 0000000000001  0000010000000  1;  >M Catalonia/554/2009/07/04
M,00456, 0000000000001  0000010000000  1;  >M Catalonia/565/2009/07/04
M,00469, 0000000000001  0000010000000  1;  >M Catalonia/569/2009/07/04
M,00457, 0000000000001  0000010000000  1;  >M Catalonia/570/2009/07/04
M,00454, 0000000000001  0000010000000  1;  >M Catalonia/604/2009/07/06
M,00454, 0000000000001  0000010000000  1;  >M Catalonia/635/2009/07/07
M,13139, 000000000335;  0266373170600  ;;  >M NY/3166/2009/04/26
M,13130, 000000000335;  0266373170600  ;;  >M NY/3008/2009/04/27
M,13130, 000000000335;  0266373170600  ;;  >M NY/3191/2009/04/25
M,13139, 000000000335;  0266373170600  ;;  >M NY/3204/2009/04/27
M,13139, 000000000335;  0266373170600  ;;  >M NY/3168/2009/04/26
M,13127, 000000000335;  0266373170600  ;;  >M NY/3225/2009/04/27
M,13139, 000000000335;  0266373170600  ;;  >M NY/3176/2009/04/26
M,13139, 000000000335;  0266373170600  ;;  >M NY/3260/2009/04/27
M,13136, 000000000335;  0266373170600  ;;  >M NY/3207/2009/04/26
M,13139, 000000000335;  0266373170600  ;;  >M NY/21/2009/04/24
M,03236, 0000000001125  0020021000100  5;  >M Stockholm/32/2009/05/30
M,02814, 0000000001125  0020021000100  5;  >M Stockholm/44/2009/06/08
M,02713, 0000000001125  0020021000100  5;  >M Stockholm/39/2009/06/09
M,02581, 0000000001125  0010011000000  5;  >M Stockholm/43/2009/06/09
M,02811, 0000000001125  0020021000100  5;  >M Stockholm/41/2009/06/11
M,13139, 000000000335;  0266373170600  ;;  >M NY/3173/2009/04/28
M,13130, 000000000335;  0266373170600  ;;  >M NY/3014/2009/04/27
M,13139, 000000000335;  0266373170600  ;;  >M NY/3188/2009/04/28
M,13139, 000000000335;  0266373170600  ;;  >M NY/3196/2009/04/28
M,13139, 000000000335;  0266373170600  ;;  >M NY/3211/2009/04/28
M,13139, 000000000335;  0266373170600  ;;  >M NY/3227/2009/04/28
M,13139, 000000000335;  0266373170600  ;;  >M NY/3230/2009/04/28
M,13130, 000000000335;  0266373170600  ;;  >M NY/3234/2009/04/28
M,13139, 000000000335;  0266373170600  ;;  >M NY/3235/2009/04/28
M,13139, 000000000335;  0266373170600  ;;  >M NY/3236/2009/04/28
M,13130, 000000000335;  0266373170600  ;;  >M NY/3237/2009/04/28
M,13139, 000000000335;  0266373170600  ;;  >M NY/3313/2009/05/04
M,13139, 000000000335;  0266373170600  ;;  >M NY/3194/2009/04/30
M,13139, 000000000335;  0266373170600  ;;  >M NY/3354/2009/05/08
M,13133, 000000000335;  0266373170600  ;;  >M NY/3232/2009/04/30
M,13139, 000000000335;  0266373170600  ;;  >M ******/Cancun-NY/Index/2009-04-15
M,13139, 000000000335;  0266373170600  ;;  >M NY/3170/2009/05/02
M,13139, 000000000335;  0266373170600  ;;  >M NY/3408/2009/05/02
M,13139, 000000000335;  0266373170600  ;;  >M Iwate/1/2009//
M,13139, 000000000335;  0266373170600  ;;  >M Shiga/3/2009//
M,13139, 000000000335;  0266373170600  ;;  >M Yokohama/1/2009//
M,13139, 000000000335;  0266373170600  ;;  >M Shizuoka/759/2009/06/02
M,13139, 000000000335;  0266373170600  ;;  >M Akita/1/2009/06/11
M,13139, 000000000335;  0266373170600  ;;  >M NY/3413/2009/05/11
M,05795, 0000000000015  0023050030300  5;  >M Rennes/2671/2009/05/23
M,00910, 0000000000001  0002000010000  1;  >M Italy/46/2009/06/05
M,03394, 0000000000015  0012021010100  5;  >M Madrid/GP575/2009/05/19
M,10980, 000000000335;  0145262160500  ;;  >M NY/12/2009/04/25
M,06373, 0000000001137  0024142130200  7;  >M NY/59/2009/05/18
M,00982, 0000000000001  0000010000001  1;  >M Larisa/1001/2009/06/14
M,00982, 0000000000001  0000010000001  1;  >M Athens/987/2009/06/15
M,13139, 000000000335;  0266373170600  ;;  >M Canada-ON/RV1529/2009//
M,13139, 000000000335;  0266373170600  ;;  >M Canada-ON/RV1527/2009/04/24
M,13139, 000000000335;  0266373170600  ;;  >M Canada-AB/RV1532/2009//
M,13130, 000000000335;  0266373170600  ;;  >M NY/3258/2009//
M,10988, 000000000335;  0145262160500  ;;  >M NY/25/2009/04/24
M,13139, 000000000335;  0266373170600  ;;  >M NY/13/2009/04/25
M,13139, 000000000335;  0266373170600  ;;  >M NY/18/2009/04/25
M,13139, 000000000335;  0266373170600  ;;  >M NY/3193/2009/04/28
M,13139, 000000000335;  0266373170600  ;;  >M NY/23/2009/04/24
M,13136, 000000000335;  0266373170600  ;;  >M NY/3214/2009/04/25
M,12399, 000000000334:  0255353170600  :;  >M NY/20/2009/04/25
M,13139, 000000000335;  0266373170600  ;;  >M NY/3172/2009/04/27
M,13139, 000000000335;  0266373170600  ;;  >M NY/3203/2009/04/27
M,13130, 000000000335;  0266373170600  ;;  >M NY/3007/2009/04/27
M,13038, 000000000335;  0266373160600  ;;  >M Brandenburg/20/2009/05/04
M,13058, 000000000335;  0266373170600  ;;  >M Bayern/63/2009//
M,13139, 000000000335;  0266373170600  ;;  >M Ohio/07/2009/04/24
M,10988, 000000000335;  0145262160500  ;;  >M Georgia/01/2009/04/27
M,11636, 0000000001138  0155273150600  8;  >M Strasbourg/2609/2009/05/06
M,13139, 000000000335;  0266373170600  ;;  >M NY/3468/2009/05/17
M,13130, 000000000335;  0266373170600  ;;  >M NY/3012/2009/04/27
M,13133, 000000000335;  0266373170600  ;;  >M Moscow/01/2009/05/21
M,13139, 000000000335;  0266373170600  ;;  >M Moscow/IIV01/2009/05/21
M,13139, 000000000335;  0266373170600  ;;  >M NY/3184/2009/04/28
M,13139, 000000001335;  0266373160600  ;;  >M Italy/49/2009/05/27
M,04937, 0000000001137  0033041010100  7;  >M Stockholm/33/2009/05/30
M,13127, 000000000335;  0266373170600  ;;  >M NY/3189/2009/04/29
M,13136, 000000000335;  0266373170600  ;;  >M NY/3190/2009/04/29
M,02441, 0000000000014  0003030010000  4;  >M Catalonia/331/2009/06/03
M,13139, 000000000335;  0266373170600  ;;  >M NY/3265/2009/04/29
M,13139, 000000000335;  0266373170600  ;;  >M Moscow/03/2009/05/26
M,13139, 000000000335;  0266373170600  ;;  >M Moscow/IIV02/2009/05/26
M,13133, 000000000335;  0266373170600  ;;  >M Guangdong/02/2009/05/27
M,13133, 000000000335;  0266373170600  ;;  >M Guangdong/05/2009/05/29
M,01566, 0000000000002  0001010000001  2;  >M Athens/793/2009/05/28
M,10022, 0000000002227  0243352160600  7;  >M Shanghai/60T/2009/05/28
M,13133, 000000000335;  0266373170600  ;;  >M Shanghai/37T/2009/05/24
M,01624, 0000000000003  0001010000000  3;  >M Athens/926/2009/06/12
M,07205, 0000000001137  0033051030300  7;  >M Strasbourg/2611/2009/05/06
M,03118, 0000000000001  0010020020300  1;  >M Massachusetts/07/2009/04/26
M,13139, 000000000335;  0266373170600  ;;  >M Massachusetts/06/2009/04/26
M,13139, 000000000335;  0266373170600  ;;  >M Moscow/IIV03/2009/06/03
M,13133, 000000000335;  0266373170600  ;;  >M NY/3205/2009/04/26
M,13128, 000000000335;  0266373170600  ;;  >M NY/3239/2009//
M,13134, 000000000335;  0266373170600  ;;  >M NY/3245/2009//
M,13131, 000000000335;  0266373170600  ;;  >M NY/3259/2009//
M,13131, 000000000335;  0266373170600  ;;  >M NY/3169/2009/04/26
M,13131, 000000000335;  0266373170600  ;;  >M NY/3185/2009/04/29
M,13131, 000000000335;  0266373170600  ;;  >M NY/3264/2009/04/29
M,13122, 000000000335;  0266373170600  ;;  >M NY/3246/2009//
M,13129, 000000000335;  0266373170600  ;;  >M NY/3262/2009/04/27
M,13131, 000000000335;  0266373170600  ;;  >M NY/3187/2009/05/01
M,09356, 0000000001137  0154162040400  7;  >M Caen/2716/2009/06/02
M,13034, 000000000335;  0266373160600  ;;  >M NY/3238/2009/04/28
M,13133, 000000000335;  0266373170600  ;;  >M Fujian/1/2009/05/22
M,13133, 000000000335;  0266373170600  ;;  >M Fuzhou/01/2009/05/28
M,13139, 000000000335;  0266373170600  ;;  >M NY/11/2009/04/25
M,01628, 0000000000002  0001010000001  2;  >M Athens/893/2009/06/09
M,13139, 000000000335;  0266373170600  ;;  >M NY/3195/2009/04/28
M,13139, 000000000335;  0266373170600  ;;  >M NY/3199/2009/04/28
M,13136, 000000000335;  0266373170600  ;;  >M NY/3247/2009/04/29
M,13126, 000000000335;  0266373170600  ;;  >M NY/3261/2009/04/29
M,13114, 000000000335;  0266373170600  ;;  >M NY/3244/2009//
M,13111, 000000000335;  0266373170600  ;;  >M NY/3049/2009/04/27
M,13125, 000000000335;  0266373170600  ;;  >M NY/3263/2009//
M,00638, 0000000000002  0000010000000  2;  >M Italy/84/2009/06/27
M,13139, 000000000335;  0266373170600  ;;  >M NY/3532/2009/05/16
M,03236, 0000000001125  0020021000100  5;  >M Stockholm/36/2009/05/29
M,13139, 000000000335;  0266373170600  ;;  >M Italy/85/2009/06/14
M,13139, 000000000335;  0266373170600  ;;  >M NY/3463/2009/05/14
M,13139, 000000000335;  0266373170600  ;;  >M Fukushima/1/2009//
M,13133, 000000000335;  0266373170600  ;;  >M Zhejiang/1/2009/05/23
M,12957, 000000000335;  0266373170600  ;;  >M Luxembourg/43/2009/06/01
M,13127, 000000000335;  0266373170600  ;;  >M NY/3223/2009//
M,00959, 0000000000001  0002000010000  1;  >M Italy/86/2009/06/18
M,13139, 000000000335;  0266373170600  ;;  >M Iwate/2/2009//
M,10863, 000000000335;  0266363150400  ;;  >M Finland/553/2009/05/10
M,09485, 0000000001138  0034162150500  8;  >M Paris/2670/2009/05/22
M,01627, 0000000000002  0001010000001  2;  >M Athens/943/2009/06/12
M,01578, 0000000000002  0001010000001  2;  >M Athens/948/2009/06/13
M,13139, 000000000335;  0266373170600  ;;  >M Moscow/IIV04/2009/07/09
M,13139, 000000000335;  0266373170600  ;;  >M Canada-QC/RV1759/2009//
M,00666, 0000000000001  0002000000000  1;  >M Italy/210/2009//
M,13139, 000000000335;  0266373170600  ;;  >M Sapporo/1/2009//
M,00456, 0000000000001  0000010000000  1;  >M Catalonia/401/2009/06/30
M,00449, 0000000000001  0000010000000  1;  >M Switzerland/01/2009/04/28
M,00534, 0000000000001  0001000000000  1;  >M Athens/761/2009/05/26
M,13139, 000000000335;  0266373170600  ;;  >M Zhejiang/2/2009/05/31
M,04937, 0000000001137  0033041010100  7;  >M Stockholm/31/2009/05/29
M,00708, 0000000000001  0002000000000  1;  >M Italy/172/2009//
M,02420, 0000000000014  0003030000000  4;  >M Catalonia/378/2009/06/23
M,01839, 0000000001114  0002010010000  4;  >M Italy/51/2009/06/21
M,01791, 0000000001114  0002010010000  4;  >M Italy/53/2009/06/21
M,01605, 0000000000002  0001010000001  2;  >M Athens/924/2009/06/12
M,00623, 0000000000002  0000010000000  2;  >M Rio de Janeiro/290/2009/05/24
M,00606, 0000000000002  0000010000000  2;  >M Rio de Janeiro/307/2009/05/27
M,00623, 0000000000002  0000010000000  2;  >M Rio de Janeiro/332/2009/05/30
M,00605, 0000000000001  0002000000000  1;  >M Ankara/1/2009//
M,00656, 0000000000001  0001000000000  1;  >M Athens/940/2009/06/12
M,02828, 0000000001125  0010011000000  5;  >M Changsha/05/2009/06/22

gsgs · Aug 18, 2010

Re: swine flu sequences (thread from h5n1experts)

-----------posted:2009/07/28 , last edited:2009/10/28-----------

Now I have 197 viruses from New York, 175 of these are full genomes.
Some (~20 sements in total , most from segment 1) sequences
have many mutations in the first ~12 nucleotides
of a segment, I assume these are lab-errors and I removed them.

mutation table here:
Listing only positions where a mutation was seen at least twice
among those 197 (as usual)
---------edit---------------
list replaced on 01.Oct.2009 with the updated version
with 225 viruses from New York

Code:

                                     0000000111222 00000111111222 000001111 00000000000000011111 0000000011111 000000000011 000 000000000 
                                     2445578569001 23467001689000 044580379 00112246667889912245 1223377711223 001347778912 346 122233345 
                                     1784898739356 80408586026379 015003144 03470145585372378806 3695927814040 444164684432 890 017903645 
                                     0106098799043 80739891442364 886466714 47589954875771031286 2783767383688 560682866211 720 235476746 
-codon-position----------------------    11 21122       2  2  2   21  21 1  11112 1 1 2 1    11    121   2      121 1             2 1 1 1 
---Index-----------------------------GGGGCGCAGGAGG AACGCAGGTACGCA ATAGGCAAT AGCAGCGGTGAAACGGAGCG CTGGCAGGCGCGG GAAGAACGTAGT CGG TGAGTAAGG 
   1 >A/Index/******/2009/02/01      ............. .............. ......... .................... ............. ............ ... .........        0      0 ,      0      0       1:>A/Index/******/2009/02/01      
   2 >A/NY/3307/2009/05/01/u/14/Bx   ............. .............. ......... .................... ............. ............ ... .........       14      0 ,     14      0       2:>A/NY/3307/2009/05/01/u/14/Bx   
   3 >A/NY/3178/2009/04/28/u/12/--   ............. .............. ......... .................... ............. ............ ... .........        9      0 ,      9      0       3:>A/NY/3178/2009/04/28/u/12/--   
   4 >A/NY/3240/2009/00/00/u/05/--   .......G..... .............. .......C. .................... ........T.... ............ ... .........        9      3 ,      9      3       4:>A/NY/3240/2009/00/00/u/05/--   
   5 >A/NY/3460/2009/05/04/ /  /--   .......G..... .............. .G.....C. .....T.............. ........T.... ............ ... ....C....        7      6 ,      7      6       5:>A/NY/3460/2009/05/04/ /  /--   
   6 >A/NY/3443/2009/05/01/ /  /--   .......G..... ........C..... .G.....C. .....T.............. ........T.... ............ ... ....C....        8      7 ,      8      7       6:>A/NY/3443/2009/05/01/ /  /--   
   7 >A/NY/3074/2009/04/29/u/11/We   .......G..... .............. .......C. .................... ........T.... ............ ... .........       11      3 ,     11      3       7:>A/NY/3074/2009/04/29/u/11/We   
   8 >A/NY/1669/2009/04/26/u/00/--   .......G..... .............. .......C. .................... .C..A...T.... .......A.... ... .........        7      6 ,      7      6       8:>A/NY/1669/2009/04/26/u/00/--   
   9 >A/NY/3455/2009/05/11/ /  /--   .......G..... .............. ..G....C. .A.................. .C..A...T.T.. .......A.... ... .........        9      9 ,      9      9       9:>A/NY/3455/2009/05/11/ /  /--   
  10 >A/NY/3454/2009/05/11/ /  /--   .......G..... .............. ..G....C. .A.................. .C..A...T.T.. .......A.... ... .........        9      9 ,      9      9      10:>A/NY/3454/2009/05/11/ /  /--   
  11 >A/NY/3574/2009/05/17/u/48/Er   .......G..... .............. .......C. .A.................. .C..A...T.T.. .......A.... ... .........        9      8 ,      9      8      11:>A/NY/3574/2009/05/17/u/48/Er   
  12 >A/NY/3323/2009/05/06/u/11/Er   .......G..... .............. .......C. .A.................. .C..A...T.T.. .......A.... ... .........        8      8 ,      8      8      12:>A/NY/3323/2009/05/06/u/11/Er   
  13 >A/NY/3183/2009/04/28/u/10/--   .....A....... .............. .......C. .........T..G..A.... ........T.... ............ ... .........        8      6 ,      8      6      13:>A/NY/3183/2009/04/28/u/10/--   
  14 >A/NY/3099/2009/04/29/u/09/Sf   .....A....... .............. .......C. .........T..G..A.... ........T.... ............ ... .........        8      6 ,      8      6      14:>A/NY/3099/2009/04/29/u/09/Sf   
  15 >A/NY/3100/2009/04/30/u/11/Sf   .....A....... .............. .......C. .........T..G..A.... ........T.... ......T..... ... .........        8      7 ,      8      7      15:>A/NY/3100/2009/04/30/u/11/Sf   
  16 >A/NY/1682/2009/04/27/u/00/--   .....A....... .............. .......C. .........T..G..A.... ........T.... ......T..... ... .........        7      7 ,      7      7      16:>A/NY/1682/2009/04/27/u/00/--   
  17 >A/NY/3709/2009/05/28/u/50/Li   ...A......G.. .G...G........ G........ ..A................. T............ ............ ... .........       10      7 ,     10      7      17:>A/NY/3709/2009/05/28/u/50/Li   
  18 >A/NY/3577/2009/05/19/u/60/Na   ...A......G.. .G...G........ G........ ..A................. T............ ............ ... .........       14      7 ,     14      7      18:>A/NY/3577/2009/05/19/u/60/Na   
  19 >A/NY/3177/2009/05/02/u/16/--   .A.A......G.. .G...G........ G........ ..A................. T............ ............ ... .........        9      8 ,      9      8      19:>A/NY/3177/2009/05/02/u/16/--   
  20 >A/NY/3967/2009/06/09/u/11/Ti   .A.A......G.. .G...G........ G........ ..A................. T............ ............ ... .........       14      8 ,     14      8      20:>A/NY/3967/2009/06/09/u/11/Ti   
  21 >A/NY/3181/2009/04/28/u/05/--   ...A......G.. .G...G........ G........ ..A................. T............ ............ ... .........        7      7 ,      7      7      21:>A/NY/3181/2009/04/28/u/05/--   
  22 >A/NY/3338/2009/05/04/u/10/Na   A.....T...... ...A........T. ......... G.............T...T. ..A......A... ...A.G...... ... .........       12     11 ,     12     11      22:>A/NY/3338/2009/05/04/u/10/Na   
  23 >A/NY/3751/2009/06/01/u/11/Pu   A.....T...... ...A........T. ......... G.............T...T. ..A......A... ...A.G...... ... .........       16     11 ,     16     11      23:>A/NY/3751/2009/06/01/u/11/Pu   
  24 >A/NY/3449/2009/05/13/u/08/We   A.....T...... ...A........T. ......... G.............T...T. ..A......A... ...A.G...... ... .........       11     11 ,     11     11      24:>A/NY/3449/2009/05/13/u/08/We   
  25 >A/NY/3337/2009/05/04/u/12/Na   A.....T...... ...A........T. ......... G.............T...T. ..A......A... ...A.G...... ... .........       13     11 ,     13     11      25:>A/NY/3337/2009/05/04/u/12/Na   
  26 >A/NY/3576/2009/05/21/ /  /--   A.....T...... ...A........TG ......... G.....A.......T...T. ..A......A... ...A.G...... ... ........A       14     14 ,     14     14      26:>A/NY/3576/2009/05/21/ /  /--   
  27 >A/NY/3573/2009/05/21/u/19/Sc   A.....T...... ...A........TG ......... G.....A.......T...T. ..A......A... ...A.G...... ... ........A       14     14 ,     14     14      27:>A/NY/3573/2009/05/21/u/19/Sc   
  28 >A/NY/4014/2009/06/10/u/12/Bm   A.....T...... ...A........TG ......... G.....A.......T...T. ..A......A... ...A.G...... ... ........A       14     14 ,     14     14      28:>A/NY/4014/2009/06/10/u/12/Bm   
  29 >A/NY/3654/2009/05/26/ /  /--   A.....T...... ...A........TG ......... G.....A.......T...T. ..A......A... ...A.G...... ... .........       19     13 ,     19     13      29:>A/NY/3654/2009/05/26/ /  /--   
  30 >A/NY/3389/2009/05/08/ /  /--   A.....T...... ...A........T. ......... G.............T...T. ..A......A... ...A.G...... ... .........       13     11 ,     13     11      30:>A/NY/3389/2009/05/08/ /  /--   
  31 >A/NY/3753/2009/06/01/u/09/Pu   A.....T...... ...A........T. ......... G.............T...T. ..A......A... ...A.G...... ... .A.......       14     12 ,     14     12      31:>A/NY/3753/2009/06/01/u/09/Pu   
  32 >A/NY/3653/2009/05/21/u/56/Du   ......T...... ...A........T. ......... G.............T...T. ..A......A... ...A.G...... ... .........       12     10 ,     12     10      32:>A/NY/3653/2009/05/21/u/56/Du   
  33 >A/NY/3514/2009/05/14/u/09/Na   ......T...... ...A........T. ......... G.............T...T. ..A......A... ...A.G...... ... .........       10     10 ,     10     10      33:>A/NY/3514/2009/05/14/u/09/Na   
  34 >A/NY/4197/2009/06/17/u/13/Sa   ......T...... ...A........T. ......... G.............T...T. ..A...A..A... ...A.G...... ... .........       15     11 ,     15     11      34:>A/NY/4197/2009/06/17/u/13/Sa   
  35 >A/NY/3348/2009/04/28/u/17/Bx   ......T...... ...A........T. ......... G.............T...T. ..A...A..A... ...A.G...... ... .........       15     11 ,     15     11      35:>A/NY/3348/2009/04/28/u/17/Bx   
  36 >A/NY/3499/2009/05/16/ /  /--   ......T...... ...A........T. ......... G.............T...T. ..A......A... ...A.G...... ... .........       10     10 ,     10     10      36:>A/NY/3499/2009/05/16/ /  /--   
  37 >A/NY/3498/2009/05/12/ /  /--   ......T...... ...A........T. ......... G.............T...T. ..A......A... ...A.G...... ... .........       10     10 ,     10     10      37:>A/NY/3498/2009/05/12/ /  /--   
  38 >A/NY/3352/2009/05/06/u/12/Ki   ......T...... ...A........T. ......... G.............T...T. ..A......A... ...A.G...... ... .........       14     10 ,     14     10      38:>A/NY/3352/2009/05/06/u/12/Ki   
  39 >A/NY/3324/2009/05/06/u/16/Wa   ......T...... ...A........T. ......... G.............T...T. ..A......A... ...A.G...... ... .........       14     10 ,     14     10      39:>A/NY/3324/2009/05/06/u/16/Wa   
  40 >A/NY/3351/2009/05/06/u/09/Qu   ............. .............. ......T.. ..................T. ..A......A... ...A.G...... ... .........       16      6 ,     16      6      40:>A/NY/3351/2009/05/06/u/09/Qu   
  41 >A/NY/  23/2009/04/24/F/17/--   ............A .............. ......... ........A.........T. ..A......A.A. ...A.G...... .AA ......G..       13     11 ,     13     11      41:>A/NY/  23/2009/04/24/F/17/--   
  42 >A/NY/3258/2009/00/00/u/20/Qu   ............A ....Y......... ......... ........A.........T. ..A......A.A. ...A.G...... .AA ......G..       12     12 ,     12     12      42:>A/NY/3258/2009/00/00/u/20/Qu   
  43 >A/NY/3263/2009/00/00/u/00/--   ............A .............. ......... ........A.........T. ..A......A.A. ...A.G...... .AA ......G..       14     11 ,     14     11      43:>A/NY/3263/2009/00/00/u/00/--   
  44 >A/NY/3262/2009/04/27/u/15/Qu   ............A .............. ......... ........A.........T. ..A......A.A. ...A.G...... .AA ......G..       11     11 ,     11     11      44:>A/NY/3262/2009/04/27/u/15/Qu   
  45 >A/NY/3205/2009/04/26/u/14/Qu   ............A .............. ......... ........A.........TT ..A......A.A. ...A.G...... .AA ......G..       15     12 ,     15     12      45:>A/NY/3205/2009/04/26/u/14/Qu   
  46 >A/NY/4099/2009/06/13/u/05/Al   ............A .............. ......... ........A.........T. ..A......A.A. ...A.G...... .AA ......G..       17     11 ,     17     11      46:>A/NY/4099/2009/06/13/u/05/Al   
  47 >A/NY/3532/2009/05/16/u/72/Gr   ............A .............. ......... ........A.........T. ..A......A.A. ...A.G...... .AA ......G..       15     11 ,     15     11      47:>A/NY/3532/2009/05/16/u/72/Gr   
  48 >A/NY/3172/2009/04/27/u/18/Ot   ............A .............. ......... ........A.........T. ..A......A.A. .T.A.G...... .AA ......G..       13     12 ,     13     12      48:>A/NY/3172/2009/04/27/u/18/Ot   
  49 >A/NY/3253/2009/00/00/u/17/Na   ............A .............. ......... ........A.........T. ..A......A.A. .T.A.G...... .AA ......G..       12     12 ,     12     12      49:>A/NY/3253/2009/00/00/u/17/Na   
  50 >A/NY/3313/2009/05/04/u/13/Oo   ............A .............. ......... ........A.........T. ..A......A.A. ...A.G...... .AA ......G..       11     11 ,     11     11      50:>A/NY/3313/2009/05/04/u/13/Oo   
  51 >A/NY/3516/2009/05/17/u/53/Al   ............A T............. ......... ........A.........T. ..A......A.A. ...A.G...... .AA ......G..       12     12 ,     12     12      51:>A/NY/3516/2009/05/17/u/53/Al   
  52 >A/NY/3740/2009/05/18/u/uu/Ny   ............A T............. ......... ........A.........T. ..A......A.A. ...A.G...... .AA ......G..       14     12 ,     14     12      52:>A/NY/3740/2009/05/18/u/uu/Ny   
  53 >A/NY/3611/2009/05/21/u/23/Sc   ............A .............. ......... ........A.........T. ..A......A.A. ...A.G...... .AA ......G..       14     11 ,     14     11      53:>A/NY/3611/2009/05/21/u/23/Sc   
  54 >A/NY/  21/2009/04/24/M/14/--   ............A .............. ......... ........A.........T. ..A....A.A.A. ...A.G...... .AA ......G..       12     12 ,     12     12      54:>A/NY/  21/2009/04/24/M/14/--   
  55 >A/NY/3207/2009/04/26/u/14/Qu   ............A .............. ......... ........A.........T. ..A....A.A.A. ...A.G...... .AA ......G..       12     12 ,     12     12      55:>A/NY/3207/2009/04/26/u/14/Qu   
  56 >A/NY/3534/2009/05/17/u/12/Sf   ............A .............. ......... ........A.........T. ..A......A.A. ...A.G...... .AA ......G..       11     11 ,     11     11      56:>A/NY/3534/2009/05/17/u/12/Sf   
  57 >A/NY/3176/2009/04/26/u/15/--   ............A .............. ......... ........A.........T. ..A......A.A. ...A.G...... .AA ......G..       12     11 ,     12     11      57:>A/NY/3176/2009/04/26/u/15/--   
  58 >A/NY/  09/2009/04/25/F/17/--   ............A .............. ......... ........A.........T. ..A......A.A. ...A.G...... .AA ......G..       11     11 ,     11     11      58:>A/NY/  09/2009/04/25/F/17/--   
  59 >A/NY/3237/2009/04/28/u/16/Qu   ............A .............. ......... ........A.........T. ..A......A.A. ...A.G...... .AA ......G..       12     11 ,     12     11      59:>A/NY/3237/2009/04/28/u/16/Qu   
  60 >A/NY/3173/2009/04/28/u/19/Qu   ............A .............. ......... ........A.........T. ..A......A.A. ...A.G...... .AA ......G..       11     11 ,     11     11      60:>A/NY/3173/2009/04/28/u/19/Qu   
  61 >A/NY/  11/2009/04/25/F/16/--   ............A .............. ......... ........A.........T. ..A......A.A. ...A.G...... .AA ......G..       14     11 ,     14     11      61:>A/NY/  11/2009/04/25/F/16/--   
  62 >A/NY/  37/2009/04/25/F/17/--   ------------- -------------- --------- -------------------- ------------- ...A.G...... .AA ---------      344     82 ,      4      4      62:>A/NY/  37/2009/04/25/F/17/--   
  63 >A/NY/  58/2009/05/23/M/34/--   ------------- -------------- --------- ........A.........T. ..A......A.A. ...A.G...... --- ---------      264     55 ,     10      7      63:>A/NY/  58/2009/05/23/M/34/--   
  64 >A/NY/  30/2009/04/00/F/17/--   ------------- -------------- --------- -------------------- ------------- ...A.G...... .AA ---------      344     82 ,      4      4      64:>A/NY/  30/2009/04/00/F/17/--   
  65 >A/NY/4072/2009/06/12/u/27/Al   ............A .............. ....A.... ........A.........T. ..A......A.A. ...A.G...... .AA .....GG..       17     13 ,     17     13      65:>A/NY/4072/2009/06/12/u/27/Al   
  66 >A/NY/3545/2009/05/16/u/49/Ro   ............A .............. ....A.... ........A.........T. ..A......A.A. ...A.G...... .AA .....GG..       13     13 ,     13     13      66:>A/NY/3545/2009/05/16/u/49/Ro   
  67 >A/NY/3012/2009/04/27/u/39/Or   ............A .............. ......... ........A.........T. ..A......A.A. ...A.G...... .AA ......G..       14     11 ,     14     11      67:>A/NY/3012/2009/04/27/u/39/Or   
  68 >A/NY/3623/2009/05/20/u/13/Er   ............A .............. ......... ........A.........T. ..A......A.A. ...A.G...... .AA ......G..       13     11 ,     13     11      68:>A/NY/3623/2009/05/20/u/13/Er   
  69 >A/NY/3188/2009/04/28/u/14/--   ............A .............. ......... ........A.........T. ..A......A.A. ...A.G...... .AA ......G..       11     11 ,     11     11      69:>A/NY/3188/2009/04/28/u/14/--   
  70 >A/NY/3488/2009/05/12/ /  /--   ............A ..T........... ......... ........A.........T. ..A......A.A. ...A.G...... .AA ......G..       12     12 ,     12     12      70:>A/NY/3488/2009/05/12/ /  /--   
  71 >A/NY/3420/2009/05/13/u/08/Cl   ............A ..T........... ......... ........A.........T. ..A......A.A. ...A.G...... .AA ......G..       14     12 ,     14     12      71:>A/NY/3420/2009/05/13/u/08/Cl   
  72 >A/NY/  59/2009/05/18/ /  /--   ............A -------------- --------- ........A.........T. ------------- ...A.G...... .AA ---------      215     52 ,      7      7      72:>A/NY/  59/2009/05/18/ /  /--   
  73 >A/NY/3265/2009/04/29/u/00/--   ............A .............. ......... ........A.........T. ..A......A.A. ...A.G...... .AA ......G..       14     11 ,     14     11      73:>A/NY/3265/2009/04/29/u/00/--   
  74 >A/NY/  16/2009/04/24/F/17/--   ------------- -------------- --------- ........A.........T. ------------- ...A.G...... .AA ---------      282     64 ,      6      6      74:>A/NY/  16/2009/04/24/F/17/--   
  75 >A/NY/  28/2009/04/00/F/14/--   ------------- -------------- --------- ........A.........T. ------------- ------------ --- ---------      342     75 ,      2      2      75:>A/NY/  28/2009/04/00/F/14/--   
  76 >A/NY/4006/2009/06/10/u/00/Or   ............A .............. ......... ........A.........T. ..A......A.A. ...A.G...... .AA ......G..       17     11 ,     17     11      76:>A/NY/4006/2009/06/10/u/00/Or   
  77 >A/NY/  30/2009/04/00/F/17/--   ------------- -------------- --------- ........A.........T. ------------- ------------ --- ---------      342     75 ,      2      2      77:>A/NY/  30/2009/04/00/F/17/--   
  78 >A/NY/  35/2009/04/25/F/16/--   ------------- -------------- --------- ........A.........T. ..A......A.A. ...ACG...... --- ---------      263     56 ,      9      8      78:>A/NY/  35/2009/04/25/F/16/--   
  79 >A/NY/  04/2009/04/00/F/17/--   ------------- -------------- --------- ........A.........T. ------------- ------------ --- ---------      343     75 ,      3      2      79:>A/NY/  04/2009/04/00/F/17/--   
  80 >A/NY/  35/2009/04/25/F/16/--   ------------- -------------- --------- -------------------- ------------- ...ACG...... .AA ---------      345     83 ,      5      5      80:>A/NY/  35/2009/04/25/F/16/--   
  81 >A/NY/  05/2009/04/00/F/14/--   ------------- -------------- --------- ........A.........T. ------------- ------------ --- ---------      342     75 ,      2      2      81:>A/NY/  05/2009/04/00/F/14/--   
  82 >A/NY/  33/2009/04/25/F/14/--   ------------- -------------- --------- ........A.........T. ..A......A.A. ...A.G...... .AA ---------      242     54 ,     10      9      82:>A/NY/  33/2009/04/25/F/14/--   
  83 >A/NY/  08/2009/04/25/F/14/--   ------------- -------------- --------- ........A.........T. ------------- ...A.G...... .AA ---------      282     64 ,      6      6      83:>A/NY/  08/2009/04/25/F/14/--   
  84 >A/NY/  25/2009/04/24/M/15/--   ............A ....T......... --------- ........A.........T. ..A......A.A. ...A.G...... .AA ......G..       76     21 ,     12     12      84:>A/NY/  25/2009/04/24/M/15/--   
  85 >A/NY/  18/2009/04/25/M/15/--   ------------- -------------- --------- ........A.........T. ------------- ...A.G...... .AA ---------      282     64 ,      6      6      85:>A/NY/  18/2009/04/25/M/15/--   
  86 >A/NY/3812/2009/05/31/u/43/Ul   ............A .............. ......... ........A.........T. ..A......A.A. ...A.G...... .AA ......G..       17     11 ,     17     11      86:>A/NY/3812/2009/05/31/u/43/Ul   
  87 >A/NY/  34/2009/04/25/F/14/--   ------------- -------------- --------- ........A.........T. ------------- ...A.G...... --- ---------      303     65 ,      5      4      87:>A/NY/  34/2009/04/25/F/14/--   
  88 >A/NY/3625/2009/05/26/u/18/Oo   ............A .............. ......... ........A.........T. ..A......A.A. ...A.G...... .AA ......G..       14     11 ,     14     11      88:>A/NY/3625/2009/05/26/u/18/Oo   
  89 >A/NY/  45/2009/04/25/ /  /--   ------------- -------------- --------- ........A.........T. ------------- ...A.G...... .AA ---------      282     64 ,      6      6      89:>A/NY/  45/2009/04/25/ /  /--   
  90 >A/NY/4074/2009/06/10/u/10/Oe   ............A .............. ......C.. ........A.........T. ..AA.....A.A. ...A.G...... .AA ......G..       15     13 ,     15     13      90:>A/NY/4074/2009/06/10/u/10/Oe   
  91 >A/NY/3819/2009/06/02/u/08/Le   ............A .............. ......C.. ........A.........T. ..AA.....A.A. ...A.G...... .AA ......G..       13     13 ,     13     13      91:>A/NY/3819/2009/06/02/u/08/Le   
  92 >A/NY/3528/2009/05/19/u/11/Oo   ............A .............. ......C.. ........A.........T. ..AA.....A.A. ...A.G...... .AA ......G..       13     13 ,     13     13      92:>A/NY/3528/2009/05/19/u/11/Oo   
  93 >A/NY/3613/2009/05/19/u/19/Oo   ............A .............. ......C.. ........A.........T. ..AA.....A.A. ...A.G...... .AA ......G..       15     13 ,     15     13      93:>A/NY/3613/2009/05/19/u/19/Oo   
  94 >A/NY/3014/2009/04/27/u/14/Ct   ............A .............. ......... ........A.........T. ..A......A.A. ...A.G...... .AA ......G..       12     11 ,     12     11      94:>A/NY/3014/2009/04/27/u/14/Ct   
  95 >A/NY/3236/2009/04/28/u/11/Qu   ............A .............. ......... ........A.........T. ..A......A.A. ...A.G...... .AA ......G..       11     11 ,     11     11      95:>A/NY/3236/2009/04/28/u/11/Qu   
  96 >A/NY/3651/2009/05/25/u/22/Je   ............A .............. ......... ........A.........T. ..A......A.A. ...A.G...... .AA ......G..       17     11 ,     17     11      96:>A/NY/3651/2009/05/25/u/22/Je   
  97 >A/NY/3239/2009/00/00/u/18/Qu   ............A .............. ......... ........A.........T. ..A......A.A. ...A.G...... .AA ......G..       11     11 ,     11     11      97:>A/NY/3239/2009/00/00/u/18/Qu   
  98 >A/NY/3247/2009/04/29/u/00/--   ............A .............. ......... ........A.........T. ..A......A.A. ...A.G...... .AA ......G..       11     11 ,     11     11      98:>A/NY/3247/2009/04/29/u/00/--   
  99 >A/NY/3244/2009/00/00/u/14/Qu   ............A .............. ......... ........A.........T. ..A......A.A. ...A.G...... .AA ......G..       12     11 ,     12     11      99:>A/NY/3244/2009/00/00/u/14/Qu   
 100 >A/NY/3261/2009/04/29/u/00/--   ............A .............. ......... ........A.........T. ..A......A.A. ...A.G...... .AA ......G..       12     11 ,     12     11     100:>A/NY/3261/2009/04/29/u/00/--   
 101 >A/NY/3049/2009/04/27/u/15/Or   ............A ..........T... ......... ........A.........T. ..A......A.A. ...A.G...... .AA C.....G..       13     13 ,     13     13     101:>A/NY/3049/2009/04/27/u/15/Or   
 102 >A/NY/3463/2009/05/14/u/23/Sl   ............A ..........T... ......... ........A.........T. ..A......A.A. ...A.G...... .AA C.....G..       16     13 ,     16     13     102:>A/NY/3463/2009/05/14/u/23/Sl   
 103 >A/NY/  37/2009/04/25/F/17/--   ------------- -------------- --------- ........A.........T. ..A......A.A. ...A.G...... --- ---------      261     55 ,      7      7     103:>A/NY/  37/2009/04/25/F/17/--   
 104 >A/NY/3580/2009/05/19/u/06/Mr   ............A .............. ......... ........A.........T. ..A......A.A. ...A.G...... .AA ......G..       14     11 ,     14     11     104:>A/NY/3580/2009/05/19/u/06/Mr   
 105 >A/NY/  14/2009/04/00/F/17/--   ------------- -------------- --------- ........A.........T. ------------- ...A.G...... --- ---------      303     65 ,      5      4     105:>A/NY/  14/2009/04/00/F/17/--   
 106 >A/NY/3509/2009/05/16/u/13/Na   ............A .............. ......... ........A.........T. ..A......A.A. ...A.G...... .AA ......G..       15     11 ,     15     11     106:>A/NY/3509/2009/05/16/u/13/Na   
 107 >A/NY/  80/2009/// /  /--       ------------- -------------- --------- ........A.........T. ------------- ...A.G...... --- ---------      305     65 ,      7      4     107:>A/NY/  80/2009/// /  /--       
 108 >A/NY/3190/2009/04/29/u/13/--   ............A ........C..... ......... ........A.........T. ..A......A.A. ...A.G...... .AA ......G..       14     12 ,     14     12     108:>A/NY/3190/2009/04/29/u/13/--   
 109 >A/NY/3568/2009/05/19/u/25/Du   ............A .............. ......... ........A..G......T. ..A......A.A. ...A.G...... TAA ......G..       13     13 ,     13     13     109:>A/NY/3568/2009/05/19/u/25/Du   
 110 >A/NY/3567/2009/05/20/u/16/Du   ............A .............. ......... ........A..G......T. ..A......A.A. ...A.G...... TAA ......G..       14     13 ,     14     13     110:>A/NY/3567/2009/05/20/u/16/Du   
 111 >A/NY/3225/2009/04/27/u/15/Na   ............A .............. ......... ........A.........T. ..A......A.A. ...A.G...... .AA ......G..       11     11 ,     11     11     111:>A/NY/3225/2009/04/27/u/15/Na   
 112 >A/NY/3202/2009/00/00/u/15/Qu   ............A .............. ......... ........A.........T. ..A......A.A. ...A.G....A. .AA ......G..       12     12 ,     12     12     112:>A/NY/3202/2009/00/00/u/15/Qu   
 113 >A/NY/  17/2009/04// /  /--     ------------- -------------- --------- ........A.........T. ------------- ...A.G....A. --- ---------      303     66 ,      5      5     113:>A/NY/  17/2009/04// /  /--     
 114 >A/NY/3166/2009/04/26/u/16/Qu   ............A ....T......... ......... ........A.........T. ..A......A.A. ...A.G....A. .AA ......G..       13     13 ,     13     13     114:>A/NY/3166/2009/04/26/u/16/Qu   
 115 >A/NY/3002/2009/04/25/u/52/Na   ............A .............. ......... ........A.........T. ..A......A.A. ...A.G....A. .AA ......G..       12     12 ,     12     12     115:>A/NY/3002/2009/04/25/u/52/Na   
 116 >A/NY/3195/2009/04/28/u/18/Na   ........A...A ......A....... ......... ....A...A.........T. ..A......A.A. ...A.G....A. .AA ......G..       15     15 ,     15     15     116:>A/NY/3195/2009/04/28/u/18/Na   
 117 >A/NY/3199/2009/04/28/u/15/--   ........A...A ......A....... ......... ....A...A.........T. ..A......A.A. ...A.G....A. .AA ......G..       15     15 ,     15     15     117:>A/NY/3199/2009/04/28/u/15/--   
 118 >A/NY/3238/2009/04/28/ /  /--   ............A .............. -........ -.......A.........T. ..A......A.A. ...A.G....A. .AA ......G..       19     14 ,     13     12     118:>A/NY/3238/2009/04/28/ /  /--   
 119 >A/NY/  10/2009/04/25/F/17/--   ............A .............. ......... ........A.........T. ..A......A.A. ...A.G...... .AA ......G..       12     11 ,     12     11     119:>A/NY/  10/2009/04/25/F/17/--   
 120 >A/NY/3364/2009/05/06/u/14/Oo   ............A .............. ......... ........A.........T. ..A......A.A. ...A.G...... .AA ......G..       11     11 ,     11     11     120:>A/NY/3364/2009/05/06/u/14/Oo   
 121 >A/NY/3502/2009/05/16/u/13/Na   ............A .............. ......... ........A.........T. ..A......A.A. ...A.G...... .AA ......G..       14     11 ,     14     11     121:>A/NY/3502/2009/05/16/u/13/Na   
 122 >A/NY/3614/2009/05/22/u/24/Na   ............A .............. ......... ........A.........T. ..A......A.A. ...A.G...... .AA ......G..       13     11 ,     13     11     122:>A/NY/3614/2009/05/22/u/24/Na   
 123 >A/NY/3959/2009/06/01/u/13/Cn   .........A..A .............. ......... .......AA.........T. ..A..G...A.A. ...A.G...... .AA ......G..       14     14 ,     14     14     123:>A/NY/3959/2009/06/01/u/13/Cn   
 124 >A/NY/4052/2009/06/09/u/49/Le   .........A..A .............. ......... .......AA.........T. ..A..G...A.A. ...A.G...... .AA ......G..       17     14 ,     17     14     124:>A/NY/4052/2009/06/09/u/49/Le   
 125 >A/NY/3960/2009/05/31/u/03/Cn   .........A..A .............. ......... .......AA.........T. ..A..G...A.A. ...A.G...... .AA ......G..       14     14 ,     14     14     125:>A/NY/3960/2009/05/31/u/03/Cn   
 126 >A/NY/3201/2009/00/00/u/13/--   ............A .............. ......... ........A.........T. ..A......A.A. ...A.G...... .AA ......G..       11     11 ,     11     11     126:>A/NY/3201/2009/00/00/u/13/--   
 127 >A/NY/3252/2009/00/00/u/15/Qu   ............A .............. ......... ........A.........T. ..A......A.A. ...A.G...... .AA ......G..       12     11 ,     12     11     127:>A/NY/3252/2009/00/00/u/15/Qu   
 128 >A/NY/3196/2009/04/28/u/17/--   ............A .............. ......... ........A.........T. ..A......A.A. ...A.G...... .AA ......G..       11     11 ,     11     11     128:>A/NY/3196/2009/04/28/u/17/--   
 129 >A/NY/3715/2009/05/29/u/45/Du   ............A .............. ......... ........A.......G.T. ..A......A.A. ...A.G.....C .AA ......G..       16     13 ,     16     13     129:>A/NY/3715/2009/05/29/u/45/Du   
 130 >A/NY/3828/2009/06/02/u/16/Re   ............A .............. ......... ........A.......G.T. ..A......A.A. ...A.G.....C .AA ......G..       16     13 ,     16     13     130:>A/NY/3828/2009/06/02/u/16/Re   
 131 >A/NY/3702/2009/05/26/u/06/Ny   ............A .............. ......... ........A.......G.T. ..A......A.A. ...A.G.....C .AA ......G..       17     13 ,     17     13     131:>A/NY/3702/2009/05/26/u/06/Ny   
 132 >A/NY/3222/2009/00/00/u/15/Qu   ............A .............. ......... ........A.........T. ..A......A.A. ...A.G...... .AA ......G..       11     11 ,     11     11     132:>A/NY/3222/2009/00/00/u/15/Qu   
 133 >A/NY/3191/2009/04/25/u/15/Qu   ............A .............. ......... ........A.........T. ..A......A.A. ...A.G...... .AA ......G..       12     11 ,     12     11     133:>A/NY/3191/2009/04/25/u/15/Qu   
 134 >A/NY/3898/2009/06/05/u/16/Sl   ............A .............. ......... ........A.........T. ..A......A.A. ...A.G...... .AA ......G..       15     11 ,     15     11     134:>A/NY/3898/2009/06/05/u/16/Sl   
 135 >A/NY/  26/2009/04/24/F/17/--   ------------- -------------- --------- ........A.........T. ------------- ------------ --- ---------      342     75 ,      2      2     135:>A/NY/  26/2009/04/24/F/17/--   
 136 >A/NY/4057/2009/06/08/u/11/Oo   ............A .............. ......... ........A.........T. ..A......A.A. ...A.G...... .AA ......G..       15     11 ,     15     11     136:>A/NY/4057/2009/06/08/u/11/Oo   
 137 >A/NY/3219/2009/00/00/u/00/--   ............A .............. ......... ........A.........T. ..A......A.A. ...A.G...... .AA ......G..       12     11 ,     12     11     137:>A/NY/3219/2009/00/00/u/00/--   
 138 >A/NY/3209/2009/04/25/u/17/Qu   ............A .............. ......... ........A.........T. ..A......A.A. ...A.G...... .AA ......G..       11     11 ,     11     11     138:>A/NY/3209/2009/04/25/u/17/Qu   
 139 >A/NY/  22/2009/04/24/M/14/--   ............A .............. ......... ........A.........T. ..A......A.A. ...A.G...... .AA ......G..       12     11 ,     12     11     139:>A/NY/  22/2009/04/24/M/14/--   
 140 >A/NY/4100/2009/06/13/u/02/Je   ............A .............. ......... ........A.........T. ..A......A.A. A..A.G...... .AA ......G..       19     12 ,     19     12     140:>A/NY/4100/2009/06/13/u/02/Je   
 141 >A/NY/3168/2009/04/26/u/09/Qu   ............A .............. ......... ........A.........T. ..A......A.A. ...A.G...... .AA ......G..       12     11 ,     12     11     141:>A/NY/3168/2009/04/26/u/09/Qu   
 142 >A/NY/3260/2009/04/27/u/18/--   ............A .............. ......... ........A.........T. ..A......A.A. ...A.G...... .AA ......G..       11     11 ,     11     11     142:>A/NY/3260/2009/04/27/u/18/--   
 143 >A/NY/3345/2009/05/01/u/45/Qu   ............A .............. ......... ........A.........T. ..A......A.A. ...A.G...... .AA ......G..       12     11 ,     12     11     143:>A/NY/3345/2009/05/01/u/45/Qu   
 144 >A/NY/3259/2009/00/00/u/15/Qu   ............A .............. ......... ........A.........T. ..A......A.A. ...A.G...... .AA ......G..       11     11 ,     11     11     144:>A/NY/3259/2009/00/00/u/15/Qu   
 145 >A/NY/3245/2009/00/00/u/16/Qu   ............A .............. ......... ........A.........T. ..A......A.A. ...A.G...... .AA ......G..       11     11 ,     11     11     145:>A/NY/3245/2009/00/00/u/16/Qu   
 146 >A/NY/3246/2009/00/00/u/17/Na   ............A .............. ......... ........A.........T. ..A......A.A. ...A.G...... .AA ......G..       13     11 ,     13     11     146:>A/NY/3246/2009/00/00/u/17/Na   
 147 >A/NY/3230/2009/04/28/u/00/--   ............A .............. ......... ........A.........T. ..A......A.A. ...A.G...... .AA ......G..       11     11 ,     11     11     147:>A/NY/3230/2009/04/28/u/00/--   
 148 >A/NY/3243/2009/00/00/u/14/Qu   ............A .............. ......... ........A.........T. ..A......A.A. ...A.G...... .AA ......G..       12     11 ,     12     11     148:>A/NY/3243/2009/00/00/u/14/Qu   
 149 >A/NY/3617/2009/05/25/u/24/To   ............A .............. ......... ........A....A....T. ..A......A.A. ...A.G..C... .AA ......G..       15     13 ,     15     13     149:>A/NY/3617/2009/05/25/u/24/To   
 150 >A/NY/3741/2009/05/19/u/00/Ki   ............A .............. ......... ........A....A....T. ..A......A.A. ...A.G..C... .AA .A....G..       14     14 ,     14     14     150:>A/NY/3741/2009/05/19/u/00/Ki   
 151 >A/NY/  27/2009/04/00/M/14/--   ------------- -------------- --------- ........A....A....T. ------------- ...A.G..C... .AA ---------      284     66 ,      8      8     151:>A/NY/  27/2009/04/00/M/14/--   
 152 >A/NY/3223/2009/00/00/u/16/Qu   ....A.......A .............. ......... ........A.........T. ..A......A.A. ...A.G...... .AA ..G...G..       14     13 ,     14     13     152:>A/NY/3223/2009/00/00/u/16/Qu   
 153 >A/NY/3184/2009/04/28/u/16/--   ....A.......A .............. ......... ........A.........T. ..A......A.A. ...A.G...... .AA ..G...G..       14     13 ,     14     13     153:>A/NY/3184/2009/04/28/u/16/--   
 154 >A/NY/  24/2009/04/24/M/14/--   ------------- -------------- --------- ........A.........T. ------------- ...A.G...... .AA ---------      282     64 ,      6      6     154:>A/NY/  24/2009/04/24/M/14/--   
 155 >A/NY/3612/2009/05/18/u/06/Oo   ............A .............. ......... ........A.........T. ..A......A.AA ...A.G...... .AA ......G..       15     12 ,     15     12     155:>A/NY/3612/2009/05/18/u/06/Oo   
 156 >A/NY/3796/2009/06/02/u/10/Ma   ............A .............. ......... ........A.G.......T. ..A......A.AA ..GA.G...... .AA ...A..G..       15     15 ,     15     15     156:>A/NY/3796/2009/06/02/u/10/Ma   
 157 >A/NY/3795/2009/06/01/u/08/Ma   ............A .............. ......... ........A.G.......T. ..A......A.AA ..GA.G...... .AA ...A..G..       15     15 ,     15     15     157:>A/NY/3795/2009/06/01/u/08/Ma   
 158 >A/NY/3655/2009/05/26/u/12/Oo   ...........TA .............. ......... ........A.........T. ..A......A.AA A..A.G...... .AA ......G..       17     14 ,     17     14     158:>A/NY/3655/2009/05/26/u/12/Oo   
 159 >A/NY/3418/2009/05/12/u/11/Oo   ...........TA .............. ......... ........A.........T. ..A......A.AA ...A.G...... .AA ......G..       13     13 ,     13     13     159:>A/NY/3418/2009/05/12/u/11/Oo   
 160 >A/NY/  15/2009/04/25/M/15/--   ............A .............. ......... ........A.........T. ..A......A.A. ...A.G...... .AA ......G..       11     11 ,     11     11     160:>A/NY/  15/2009/04/25/M/15/--   
 161 >A/NY/4048/2009/06/10/u/23/Mt   ............A .............. ......... ........A.........T. ..A......A.A. ...A.G...... .AA ......G..       16     11 ,     16     11     161:>A/NY/4048/2009/06/10/u/23/Mt   
 162 >A/NY/3529/2009/05/19/u/11/Oo   ............A .............. ......... ........A.........T. ..A......A.A. ...A.G...... .AA ......G..       11     11 ,     11     11     162:>A/NY/3529/2009/05/19/u/11/Oo   
 163 >A/NY/  06/2009/04/25/F/21/--   ............A .............. ......... ........A.........T. ..A......A.A. ...A.G...... .AA ......G..       12     11 ,     12     11     163:>A/NY/  06/2009/04/25/F/21/--   
 164 >A/NY/3185/2009/04/29/u/17/--   ............A .............. ......... ........A.........T. ..A......A.A. ...A.G...... .AA ......G..       11     11 ,     11     11     164:>A/NY/3185/2009/04/29/u/17/--   
 165 >A/NY/  13/2009/04/25/F/17/--   ............A .............. ......... ........A.........T. ..A......A.A. ...A.G...... .AA ......G..       11     11 ,     11     11     165:>A/NY/  13/2009/04/25/F/17/--   
 166 >A/NY/3726/2009/05/31/u/50/Sf   ............A .............. ...A..... ........A.........TT ..A......A.A. ...A.G...... .AA ......G..       14     13 ,     14     13     166:>A/NY/3726/2009/05/31/u/50/Sf   
 167 >A/NY/3992/2009/06/10/u/28/Ca   ..A.........A .............. ...A..... ...C....A.........T. ..A......A.A. ...A.G...... .AA ......G..       16     14 ,     16     14     167:>A/NY/3992/2009/06/10/u/28/Ca   
 168 >A/NY/3744/2009/05/15/u/16/Qu   ..A.........A .............. ......... ...C....A.........T. ..A......A.A. ...A.G...... .AA ......G..       15     13 ,     15     13     168:>A/NY/3744/2009/05/15/u/16/Qu   
 169 >A/NY/3803/2009/06/02/u/17/Je   ............A .............. ......... ........A.........T. ..A......A.A. ...A.G...... .AA ......G..       13     11 ,     13     11     169:>A/NY/3803/2009/06/02/u/17/Je   
 170 >A/NY/3204/2009/04/27/u/18/Qu   ............A .............. ......... ........A.........T. ..A......A.A. ...A.G...... .AA ......G..       11     11 ,     11     11     170:>A/NY/3204/2009/04/27/u/18/Qu   
 171 >A/NY/3501/2009/05/17/u/07/Na   ............A .............. ......... ........A.........T. ..A......A.A. ...A.G...... .AA ......G..       12     11 ,     12     11     171:>A/NY/3501/2009/05/17/u/07/Na   
 172 >A/NY/3242/2009/00/00/u/15/Qu   ............A .............. ......... ........A.........T. ..A......A.A. ...A.G...... .AA ......G..       11     11 ,     11     11     172:>A/NY/3242/2009/00/00/u/15/Qu   
 173 >A/NY/3203/2009/04/27/u/51/Sf   ............A .............. ......... ........A.........T. ..A......A.A. ...A.G...... .AA ......G..       13     11 ,     13     11     173:>A/NY/3203/2009/04/27/u/51/Sf   
 174 >A/NY/3206/2009/04/26/u/14/Qu   ............A .............. ......... ........A.........T. ..A......A.A. ...A.G...... .AA ......G..       11     11 ,     11     11     174:>A/NY/3206/2009/04/26/u/14/Qu   
 175 >A/NY/3193/2009/04/28/u/15/Qu   ............A ...........A.. ......... ........A.........T. ..A......A.A. ...A.G...... .AA ......GA.       13     13 ,     13     13     175:>A/NY/3193/2009/04/28/u/15/Qu   
 176 >A/NY/  18/2009/04/25/M/15/--   ............A ...........A.. ......... ........A.........T. ..A......A.A. ...A.G...... .AA ......GA.       13     13 ,     13     13     176:>A/NY/  18/2009/04/25/M/15/--   
 177 >A/NY/3189/2009/04/29/u/12/Sf   ............A .............. ......... ........A.........T. ..A......A.A. ...A.G...... .AA ......G..       15     11 ,     14     11     177:>A/NY/3189/2009/04/29/u/12/Sf   
 178 >A/NY/3231/2009/00/00/u/17/--   ............A .............. ......... ........A.........T. ..A......A.A. ...A.G...... .AA ......G..       11     11 ,     11     11     178:>A/NY/3231/2009/00/00/u/17/--   
 179 >A/NY/3563/2009/05/19/u/02/Sf   ............A .............. ......... ........A.........T. ..A......A.A. ...A.G...... .AA ......G..       12     11 ,     12     11     179:>A/NY/3563/2009/05/19/u/02/Sf   
 180 >A/NY/3221/2009/00/00/u/15/Qu   ............A .............. ......... ........A.........T. ..A......A.A. ...A.G...... .AA ......G..       11     11 ,     11     11     180:>A/NY/3221/2009/00/00/u/15/Qu   
 181 >A/NY/3234/2009/04/28/u/18/--   ............A .............. ......... ........A.........T. ..A......A.A. ...A.G...... .AA ......G..       12     11 ,     12     11     181:>A/NY/3234/2009/04/28/u/18/--   
 182 >A/NY/3354/2009/05/08/M/09/Oo   ............A .............. ......... ........A.........T. ..A......A.A. ...A.G...... .AA ......G..       11     11 ,     11     11     182:>A/NY/3354/2009/05/08/M/09/Oo   
 183 >A/NY/3264/2009/04/29/u/00/--   ............A .............. ......... ........A.........T. ..A......A.A. ...A.G...... .AA ......G..       12     11 ,     12     11     183:>A/NY/3264/2009/04/29/u/00/--   
 184 >A/NY/3186/2009/04/26/u/16/--   ............A .............. ......... ........A.........T. ..A......A.A. ...A.G...... .AA ......G..       11     11 ,     11     11     184:>A/NY/3186/2009/04/26/u/16/--   
 185 >A/NY/3413/2009/05/11/u/04/Sf   ............A .............. ........C ........A.........T. ..A......A.A. ...A.G...... .AA ......G..       14     12 ,     14     12     185:>A/NY/3413/2009/05/11/u/04/Sf   
 186 >A/NY/3408/2009/05/02/u/26/We   ............A .............. ........C ........A.........T. ..A......A.A. ...A.G...... .AA ......G..       12     12 ,     12     12     186:>A/NY/3408/2009/05/02/u/26/We   
 187 >A/NY/  19/2009/04/25/F/14/--   ............A .............. ......... ........A.........T. ..A......A.A. ...A.G...... .AA ......G..       11     11 ,     11     11     187:>A/NY/  19/2009/04/25/F/14/--   
 188 >A/NY/3214/2009/04/25/u/14/Qu   ............A .............. ......... ........A.........T. ..A......A.A. ...A.G...... .AA ......G..       12     11 ,     12     11     188:>A/NY/3214/2009/04/25/u/14/Qu   
 189 >A/NY/3167/2009/04/28/u/19/Qu   ............A .............. ......... ........A.........T. ..A......A.A. ...A.G...... .AA ......G..       11     11 ,     11     11     189:>A/NY/3167/2009/04/28/u/19/Qu   
 190 >A/NY/3211/2009/04/28/u/16/Qu   ............A .............. ......... ........A.........T. ..A......A.A. ...A.G...... .AA ......G..       12     11 ,     12     11     190:>A/NY/3211/2009/04/28/u/16/Qu   
 191 >A/NY/3255/2009/00/00/u/17/Qu   ............A .............. ......... ........A.........T. ..A......A.A. ...A.G...... .AA ......G..       11     11 ,     11     11     191:>A/NY/3255/2009/00/00/u/17/Qu   
 192 >A/NY/3232/2009/04/30/u/00/--   ............A .............. ......... G.......A.........T. ..A......A.A. ...A.G...... .AA ......G..       12     12 ,     12     12     192:>A/NY/3232/2009/04/30/u/00/--   
 193 >A/NY/3257/2009/00/00/u/15/Qu   ............A .............. ......... ........A.........T. ..A......A.A. ...A.G...... .AA ......G..       11     11 ,     11     11     193:>A/NY/3257/2009/00/00/u/15/Qu   
 194 >A/NY/3169/2009/04/26/u/15/Qu   ............A .............. ......... ........A.........T. ..A......A.A. ...A.G...... .AA ......G..       11     11 ,     11     11     194:>A/NY/3169/2009/04/26/u/15/Qu   
 195 >A/NY/3124/2009/04/28/u/12/Oo   ............A .............. ......... ........A.........T. ..A......A.A. ...A.G...... .AA ......G..       11     11 ,     11     11     195:>A/NY/3124/2009/04/28/u/12/Oo   
 196 >A/NY/3571/2009/05/20/u/04/Oo   ............A .........G.... ......... ........A.........T. ..A......A.A. ...A.G...... .AA ......G..       12     12 ,     12     12     196:>A/NY/3571/2009/05/20/u/04/Oo   
 197 >A/NY/3552/2009/05/20/u/09/Oo   ............A .........G.... ......... ........A.........T. ..A......A.A. ...A.G...... .AA ......G..       13     12 ,     13     12     197:>A/NY/3552/2009/05/20/u/09/Oo   
 198 >A/NY/3627/2009/05/22/u/08/Oo   ............A .........G.... ......... ........A.........T. ..A......A.A. ...A.G...... .AA ......G..       12     12 ,     12     12     198:>A/NY/3627/2009/05/22/u/08/Oo   
 199 >A/NY/3008/2009/04/27/u/50/Sf   ............A .............. ......... ........A.........T. ..A......A.A. ...A.G...... .AA ......G..       11     11 ,     11     11     199:>A/NY/3008/2009/04/27/u/50/Sf   
 200 >A/NY/3818/2009/06/02/u/04/St   ..A.........A .............. ......... ........A.........T. ..A......A.A. ...A.G...... .AA ......G..       14     12 ,     14     12     200:>A/NY/3818/2009/06/02/u/04/St   
 201 >A/NY/3629/2009/05/24/u/20/Sf   ..A.........A .............. ......... ........A.........T. ..A......A.A. ...A.G...... .AA ......G..       15     12 ,     15     12     201:>A/NY/3629/2009/05/24/u/20/Sf   
 202 >A/NY/3469/2009/05/16/ /  /--   ............A .............. ......... ........A.........T. ..A......A.A. ...A.G...T.. .AA ......G..       12     12 ,     12     12     202:>A/NY/3469/2009/05/16/ /  /--   
 203 >A/NY/3551/2009/05/20/u/26/Ro   ............A .............. .....A... ........A.........T. ..A......A.A. ...A.G...T.. .AA ......G..       15     13 ,     15     13     203:>A/NY/3551/2009/05/20/u/26/Ro   
 204 >A/NY/3582/2009/05/20/u/21/Bm   ............A .............. .....A... ........A.........T. ..A......A.A. ...A.G...T.. .AA ......G..       13     13 ,     13     13     204:>A/NY/3582/2009/05/20/u/21/Bm   
 205 >A/NY/3468/2009/05/17/u/04/Ro   ............A .............. .....A... ........A.........T. ..A......A.A. ...A.G...T.. .AA ......G..       13     13 ,     13     13     205:>A/NY/3468/2009/05/17/u/04/Ro   
 206 >A/NY/3007/2009/04/27/u/33/Mr   ............A .......A...... ......... ........A........AT. ..A......A.A. ...A.G...... .AA ......G..       14     13 ,     14     13     206:>A/NY/3007/2009/04/27/u/33/Mr   
 207 >A/NY/  57/2009/05/08/M/09/--   ------------- -------------- --------- ........A........AT. ------------- ...A.G...... --- ---------      303     66 ,      5      5     207:>A/NY/  57/2009/05/08/M/09/--   
 208 >A/NY/3895/2009/06/03/u/12/Sf   ............A .......A...... ......... ........A........AT. ..A......A.A. ...A.G...... .AA ......G..       20     13 ,     20     13     208:>A/NY/3895/2009/06/03/u/12/Sf   
 209 >A/NY/  39/2009/04/25/F/25/--   ------------- -------------- --------- ........A.........T. ..A......A.A. ...A.G...... .AA ---------      241     54 ,      9      9     209:>A/NY/  39/2009/04/25/F/25/--   
 210 >A/NY/4290/2009/06/19/u/25/Ge   ....A.......A .............. ......... ........A.........T. ..A......A.A. ...A.G...... .AA ......G..       17     12 ,     17     12     210:>A/NY/4290/2009/06/19/u/25/Ge   
 211 >A/NY/3187/2009/05/01/u/15/--   ....A.......A .............. ......... ........A.........T. ..A......A.A. ...A.G...... .AA ......G..       13     12 ,     13     12     211:>A/NY/3187/2009/05/01/u/15/--   
 212 >A/NY/3365/2009/04/30/u/19/Qu   ............A .............. ......... ........A.........T. ..A......A.A. ...A.G...... .AA ......G..       11     11 ,     11     11     212:>A/NY/3365/2009/04/30/u/19/Qu   
 213 >A/NY/3170/2009/05/02/u/24/Qu   ............A .............. ......... ........A.........T. ..A......A.A. ...A.G...... .AA ......G..       12     11 ,     12     11     213:>A/NY/3170/2009/05/02/u/24/Qu   
 214 >A/NY/3215/2009/04/25/u/15/Qu   ............A .............. ......... ........A.........T. ..A......A.A. ...A.G...... .AA ......G..       11     11 ,     11     11     214:>A/NY/3215/2009/04/25/u/15/Qu   
 215 >A/NY/  31/2009/04/24/F/14/--   ............A .............. ......... ........A.........T. ..A......A.A. ...A.G...... .AA ......G..       12     11 ,     12     11     215:>A/NY/  31/2009/04/24/F/14/--   
 216 >A/NY/3227/2009/04/28/u/17/Qu   ............A .............. ......... ........A.........T. ..A......A.A. ...A.G...... .AA ......G..       11     11 ,     11     11     216:>A/NY/3227/2009/04/28/u/17/Qu   
 217 >A/NY/3194/2009/04/30/u/09/--   ............A .............. ......... ........A.........T. ..A......A.A. ...A.G...... .AA ......G..       12     11 ,     12     11     217:>A/NY/3194/2009/04/30/u/09/--   
 218 >A/NY/3220/2009/00/00/u/14/--   ............A .............. ......... ........A.........T. ..A......A.A. ...A.G...... .AA ......G..       11     11 ,     11     11     218:>A/NY/3220/2009/00/00/u/14/--   
 219 >A/NY/3210/2009/04/24/u/18/Qu   ............A .............. ......... ........A.........T. ..A......A.A. ...A.G...... .AA ......G..       12     11 ,     12     11     219:>A/NY/3210/2009/04/24/u/18/Qu   
 220 >A/NY/3235/2009/04/28/u/14/Qu   ............A .............. ......... ........A.........T. ..A......A.A. ...A.G...... .AA ......G..       11     11 ,     11     11     220:>A/NY/3235/2009/04/28/u/14/Qu   
 221 >A/NY/3218/2009/00/00/u/10/--   ............A .............. ......... ........A.........T. ..A......A.A. ...A.G...... .AA ......G..       12     11 ,     12     11     221:>A/NY/3218/2009/00/00/u/10/--   
 222 >A/NY/3149/2009/00/00/u/00/Qu   ............A .............. ......... ........A.........T. ..A......A.A. ...A.G...... .AA ......G..       11     11 ,     11     11     222:>A/NY/3149/2009/00/00/u/00/Qu   
 223 >A/NY/  12/2009/04/25/F/17/--   ............A .............. ......... ........A.........T. ..A......A.A. ...A.G...... .AA ......G..       12     11 ,     12     11     223:>A/NY/  12/2009/04/25/F/17/--   
 224 >A/NY/3566/2009/05/20/M/21/Sf   ............A .............. ......... ........A.........T. ..A......A.A. ...A.G...... .AA ......G..       15     11 ,     15     11     224:>A/NY/3566/2009/05/20/M/21/Sf   
 225 >A/NY/  20/2009/04/25/F/15/--   ............A .............. ......... -.......A......----- ..A......A.A. ...A.G...... .AA ......G..       30     16 ,     10     10     225:>A/NY/  20/2009/04/25/F/15/--   
 226 >A/NY/3747/2009/05/16/u/00/Qu   ............A .............. ......... ........A.........T. ..A......A.A. ...A.G...... .AA ......G..       13     11 ,     13     11     226:>A/NY/3747/2009/05/16/u/00/Qu   
 227 >A/Index/Cancun/2009/04/15      ............A .............. ......... ........A.........T. ..A......A.A. ...A.G...... .AA ......G..       11     11 ,     11     11     227:>A/Index/Cancun/2009/04/15      
                                                                                                                                          
---Index-----------------------------GGGGCGCAGGAGG AACGCAGGTACGCA ATAGGCAAT AGCAGCGGTGAAACGGAGCG CTGGCAGGCGCGG GAAGAACGTAGT CGG TGAGTAAGG 
-codon-position----------------------    11 21122       2  2  2   21  21 1  11112 1 1 2 1    11    121   2      121 1             2 1 1 1 
                                     0000000111222 00000111111222 000001111 00000000000000011111 0000000011111 000000000011 000 000000000 
                                     2445578569001 23467001689000 044580379 00112246667889912245 1223377711223 001347778912 346 122233345 
                                     1784898739356 80408586026379 015003144 03470145585372378806 3695927814040 444164684432 890 017903645 
                                     0106098799043 80739891442364 886466714 47589954875771031286 2783767383688 560682866211 720 235476746

gsgs · Aug 18, 2010

Re: swine flu sequences (thread from h5n1experts)

--------------posted:2009/10/29--------------

Code:

                                           000000000000000000000000000000000000011111111111111111111111111111111111111111222222222 0000000000000000000000000000000000000111111111111111111111111111111111111112222222222       
                                           000111222222223334444445555556777889900001111222223333334444455556667777888999000001122 0011111222333344444444555666677788999001112233344445666666777777788888999990000001122       
                                           247127012477880274566783445583129785713560799001890135571133825673681278579479133576968 1255679589045845666788447034908927567585685703613661004899024566711259015690134792800       
                                           822037702538263091004105670209479481530103324798168481372728382979501805429599008403770 9869210287054170257069191365659556793890151582399142348026183805358475918250630644923       
-codon-position----------------------------1  2     2 2 1 21  12  1 11 1  111   21112 1 1       1  2111111 21  1      121 212  12  11    1           22  1 1           12 1      1 2   121  1    21     21 2  2 2    2 1       
---Index-----------------------------------CCTGGAGGAAACGGGGCACCGGGTGCGACTGAGGCGTTGAAGGAAGAAACGCCATACAAGGAGAAGGGTACCTTTGAGGAGGCGTTG CCGAGACAACAAGGCTCACCGAACGGGAGGCGCTGAAAGTGTGTCCAGAAGTATTGAAAATGTCACTATTATACCTTGGCAGTGA       
   1 >A/******/index/2009/02/01            ....................................................................................... .....................................................................................  0, 0, 0, 0 ******/index/2009/02/01            
   2 >A/Wisconsin/629-D01529/2009/04/30    ....................................................................................... .....................................................................................  0, 0, 0, 0 Wisconsin/629-D01529/2009/04/30    
   3 >A/Wisconsin/629-D01642/2009/04/29    ....................................................................................... .....................................................................................  0, 0, 0, 0 Wisconsin/629-D01642/2009/04/29    
   4 >A/Wisconsin/629-D00869/2009/05/03    ....................................................................................... .....................................................................................  0, 0, 0, 0 Wisconsin/629-D00869/2009/05/03    
   5 >A/Mexico/4603/2009/04/19             ....................................................................................... .....................................................................................  0, 0, 0, 0 Mexico/4603/2009/04/19             
   6 >A/Wisconsin/629-D01839/2009/05/15    ....................................................................................... .....................................................................................  0, 0, 0, 0 Wisconsin/629-D01839/2009/05/15    
   7 >A/Wisconsin/629-D01773/2009/04/30    ....................................................................................... .....................................................................................  0, 0, 0, 0 Wisconsin/629-D01773/2009/04/30    
   8 >A/Wisconsin/629-D00677/2009/05/01    ....................................................................................... .....................................................................................  0, 0, 0, 0 Wisconsin/629-D00677/2009/05/01    
   9 >A/Wisconsin/629-D01735/2009/05/02    ....................................................................................... .....................................................................................  0, 0, 0, 0 Wisconsin/629-D01735/2009/05/02    
  10 >A/Wisconsin/629-D02298/2009/05/22    ....................................................................................... .....................................................................................  0, 0, 0, 0 Wisconsin/629-D02298/2009/05/22    
  11 >A/Bethesda/SP508/2009/06/18          ....................................................................................... .....................................................................................  0, 0, 0, 0 Bethesda/SP508/2009/06/18          
  12 >A/Korea/01/2009/05/02                ....................................................................................... .....................................................................................  0, 0, 0, 0 Korea/01/2009/05/02                
  13 >A/Wisconsin/629-D01919/2009/05/09    ....................................................................................... .....................................................................................  0, 0, 0, 0 Wisconsin/629-D01919/2009/05/09    
  14 >A/Wisconsin/629-D00084/2009/05/19    ....................................................................................... .....................................................................................  0, 0, 0, 0 Wisconsin/629-D00084/2009/05/19    
  15 >A/Wisconsin/629-D00498/2009/05/03    ....................................................................................... .....................................................................................  0, 0, 0, 0 Wisconsin/629-D00498/2009/05/03    
  16 >A/Wisconsin/629-D00434/2009/05/16    ....................................................................................... .....................................................................................  0, 0, 0, 0 Wisconsin/629-D00434/2009/05/16    
  17 >A/Wisconsin/629-D00015/2009/04/30    ....................................................................................... .....................................................................................  0, 0, 0, 0 Wisconsin/629-D00015/2009/04/30    
  18 >A/Wisconsin/629-D01486/2009/04/29    ....................................................................................... .....................................................................................  0, 0, 0, 0 Wisconsin/629-D01486/2009/04/29    
  19 >A/Wisconsin/629-D01558/2009/04/30    ....................................................................................... .....................................................................................  0, 0, 0, 0 Wisconsin/629-D01558/2009/04/30    
  20 >A/Mexico/4108/2009/04/03             ....................................................................................... .....................................................................................  0, 0, 0, 0 Mexico/4108/2009/04/03             
  21 >A/Wisconsin/629-D00378/2009/05/04    ....................................................................................... .....................................................................................  0, 0, 0, 0 Wisconsin/629-D00378/2009/05/04    
  22 >A/Wisconsin/629-D02432/2009/05/04    ....................................................................................... .....................................................................................  0, 0, 0, 0 Wisconsin/629-D02432/2009/05/04    
  23 >A/Wisconsin/629-D02028/2009/05/01    ....................................................................................... .....................................................................................  0, 0, 0, 0 Wisconsin/629-D02028/2009/05/01    
  24 >A/Wisconsin/629-D00698/2009/05/27    ....................................................................................... .....................................................................................  0, 0, 0, 0 Wisconsin/629-D00698/2009/05/27    
  25 >A/Wisconsin/629-D01189/2009/05/02    ....................................................................................... .....................................................................................  0, 0, 0, 0 Wisconsin/629-D01189/2009/05/02    
  26 >A/Beijing/501/2009/05/21             ....................................................................................... .....................................................................................  0, 0, 0, 0 Beijing/501/2009/05/21             
  27 >A/Wisconsin/629-D01505/2009/04/28    ....................................................................................... .....................................................................................  0, 0, 0, 0 Wisconsin/629-D01505/2009/04/28    
  28 >A/Mexico/4604/2009/04/19             ....................................................................................... .....................................................................................  0, 0, 0, 0 Mexico/4604/2009/04/19             
  29 >A/Wisconsin/629-D00829/2009/05/28    ....................................................................................... .....................................................................................  0, 0, 0, 0 Wisconsin/629-D00829/2009/05/28    
  30 >A/Wisconsin/629-D02455/2009/05/02    ....................................................................................... .....................................................................................  0, 0, 0, 0 Wisconsin/629-D02455/2009/05/02    
  31 >A/Wisconsin/629-D00905/2009/05/08    ....................................................................................... .....................................................................................  0, 0, 0, 0 Wisconsin/629-D00905/2009/05/08    
  32 >A/Wisconsin/629-D00447/2009/04/30    ....................................................................................... .....................................................................................  0, 0, 0, 0 Wisconsin/629-D00447/2009/04/30    
  33 >A/Wisconsin/629-D00349/2009/05/04    ....................................................................................... .....................................................................................  0, 0, 0, 0 Wisconsin/629-D00349/2009/05/04    
  34 >A/Wisconsin/629-D02144/2009/05/28    ....................................................................................... .....................................................................................  0, 0, 0, 0 Wisconsin/629-D02144/2009/05/28    
  35 >A/Wisconsin/629-D00978/2009/05/14    ....................................................................................... .....................................................................................  0, 0, 0, 0 Wisconsin/629-D00978/2009/05/14    
  36 >A/Wisconsin/629-D01521/2009/05/20    ....................................................................................... .....................................................................................  0, 0, 0, 0 Wisconsin/629-D01521/2009/05/20    
  37 >A/Wisconsin/629-D00179/2009/05/10    ....................................................................................... .....................................................................................  0, 0, 0, 0 Wisconsin/629-D00179/2009/05/10    
  38 >A/Wisconsin/629-D00396/2009/05/04    ....................................................................................... .....................................................................................  0, 0, 0, 0 Wisconsin/629-D00396/2009/05/04    
  39 >A/Wisconsin/629-D01817/2009/05/01    ....................................................................................... .....................................................................................  0, 0, 0, 0 Wisconsin/629-D01817/2009/05/01    
  40 >A/Wisconsin/629-D00228/2009/05/06    ....................................................................................... .....................................................................................  0, 0, 0, 0 Wisconsin/629-D00228/2009/05/06    
  41 >A/Guangdong/03/2009/05/29            ....................................................................................... .....................................................................................  0, 0, 0, 0 Guangdong/03/2009/05/29            
  42 >A/Wisconsin/629-D01764/2009/05/04    ....................................................................................... .....................................................................................  1, 0, 1, 0 Wisconsin/629-D01764/2009/05/04    
  43 >A/Minnesota/03/2009/04/              ....................................................................................... ..........................................................................T..........  1, 1, 1, 1 Minnesota/03/2009/04/              
  44 >A/Mexico/4646/2009/04/20             ....................................................................................... ..........................................................................T..........  1, 1, 1, 1 Mexico/4646/2009/04/20             
  45 >A/Minnesota/02/2009/04/27            ....................................................................................... ..........................................................................T..........  2, 1, 2, 1 Minnesota/02/2009/04/27            
  46 >A/Mexico/InDRE4487/2009/04/14        .........G............................................................................. .....................................................................................  1, 1, 1, 1 Mexico/InDRE4487/2009/04/14        
  47 >A/Mexico/InDRE4115/2009//            .........G............................................................................. .....................................................................................  1, 1, 1, 1 Mexico/InDRE4115/2009//            
  48 >A/Mexico/4115/2009/04/07             .........G............................................................................. .....................................................................................  1, 1, 1, 1 Mexico/4115/2009/04/07             
  49 >A/Wisconsin/629-D01837/2009/05/14    ....................................................................................... .................................................T...................................  1, 1, 1, 1 Wisconsin/629-D01837/2009/05/14    
  50 >A/Wisconsin/629-D02427/2009/05/20    ....................................................................................... ............A....................................T...................................  3, 2, 3, 2 Wisconsin/629-D02427/2009/05/20    
  51 >A/NY/3099/2009/04/29                 ................................A...................................................... .....................................................................................  2, 1, 1, 1 NY/3099/2009/04/29                 
  52 >A/Maryland/05/2009/04/29             ................................A...................................................... .....................................................................................  1, 1, 1, 1 Maryland/05/2009/04/29             
  53 >A/NY/1682/2009/04/27                 ................................A...................................................... .....................................................................................  1, 1, 1, 1 NY/1682/2009/04/27                 
  54 >A/NY/3100/2009/04/30                 ................................A...................................................... .....................................................................................  1, 1, 1, 1 NY/3100/2009/04/30                 
  55 >A/NY/3183/2009/04/28                 ................................A...................................................... .........................................C...........................................  2, 2, 2, 2 NY/3183/2009/04/28                 
  56 >A/Wisconsin/629-D01083/2009/05/28    ....................................................................................... .....................................................................................  1, 0, 1, 0 Wisconsin/629-D01083/2009/05/28    
  57 >A/Wisconsin/629-D00750/2009/04/30    ....................................................................................... .....................................................................................  1, 0, 1, 0 Wisconsin/629-D00750/2009/04/30    
  58 >A/Mexico/47N/2009/04/25              ....................................................................................... ........................A............................................................  1, 1, 1, 1 Mexico/47N/2009/04/25              
  59 >A/Mexico/48N/2009/04/25              ....................................................................................... ........................A............................................................  1, 1, 1, 1 Mexico/48N/2009/04/25              
  60 >A/Wisconsin/629-D01962/2009/05/04    ....................................................................................... .....................................................................................  1, 0, 1, 0 Wisconsin/629-D01962/2009/05/04    
  61 >A/Israel/644/2009/04/                ....................................................................................... .....................................................................................  1, 0, 1, 0 Israel/644/2009/04/                
  62 >A/Wisconsin/629-D01883/2009/05/27    ....................................................................................... .....................................................................................  1, 0, 1, 0 Wisconsin/629-D01883/2009/05/27    
  63 >A/Beijing/502/2009/05/20             ..............................................................................A........ .....................................................................................  1, 1, 1, 1 Beijing/502/2009/05/20             
  64 >A/Colorado/03/2009/04/27             ....................................................................................... ................................A....................................................  1, 1, 1, 1 Colorado/03/2009/04/27             
  65 >A/CA/05/2009/03/30                   ....................................................................................... ................................A....................................................  1, 1, 1, 1 CA/05/2009/03/30                   
  66 >A/Wisconsin/629-D01861/2009/05/01    ....................................................................................... .....................................................................................  1, 0, 1, 0 Wisconsin/629-D01861/2009/05/01    
  67 >A/NY/3351/2009/05/06                 ....................................................................................... .....................................................................................  1, 0, 1, 0 NY/3351/2009/05/06                 
  68 >A/Wisconsin/629-D02425/2009/05/04    ....................................................................................... ...................................C.................................................  1, 1, 1, 1 Wisconsin/629-D02425/2009/05/04    
  69 >A/Wisconsin/629-D00487/2009/05/07    ....................................................................................... ...................................C.................................................  1, 1, 1, 1 Wisconsin/629-D00487/2009/05/07    
  70 >A/Wisconsin/629-D01017/2009/05/03    ....................................................................................... ...................................C.................................................  1, 1, 1, 1 Wisconsin/629-D01017/2009/05/03    
  71 >A/Wisconsin/629-D01880/2009/05/04    ....................................................................................... ...................................C.................................................  1, 1, 1, 1 Wisconsin/629-D01880/2009/05/04    
  72 >A/Wisconsin/629-D01980/2009/05/02    ....................................................................................... ...................................C.................................................  1, 1, 1, 1 Wisconsin/629-D01980/2009/05/02    
  73 >A/Wisconsin/629-D01810/2009/05/04    ....................................................................................... ...................................C.................................................  1, 1, 1, 1 Wisconsin/629-D01810/2009/05/04    
  74 >A/Wisconsin/629-D01909/2009/05/08    .T..................................................................................... ...................................C.................................................  2, 2, 2, 2 Wisconsin/629-D01909/2009/05/08    
  75 >A/Wisconsin/629-D01296/2009/05/03    ....................................................................................... ...................................C.................................................  2, 1, 2, 1 Wisconsin/629-D01296/2009/05/03    
  76 >A/Wisconsin/629-D01026/2009/05/28    ....................................................................................... .....................................................................................  1, 0, 1, 0 Wisconsin/629-D01026/2009/05/28    
  77 >A/Wisconsin/629-D01308/2009/05/01    ....................................................................................... .....................................................................................  1, 0, 1, 0 Wisconsin/629-D01308/2009/05/01    
  78 >A/Brawley/40082/2009/04/21           ....................................................................................... .....................................................................................  1, 0, 1, 0 Brawley/40082/2009/04/21           
  79 >A/Wisconsin/629-D00714/2009/05/04    ....................................................................................... ...............................A.....................................................  1, 1, 1, 1 Wisconsin/629-D00714/2009/05/04    
  80 >A/Wisconsin/629-D00997/2009/05/14    ....................................................................................... ...............................A.....................................................  2, 1, 2, 1 Wisconsin/629-D00997/2009/05/14    
  81 >A/Wisconsin/629-D00575/2009/05/16    ....................................................................................... ...............................A.....................................................  1, 1, 1, 1 Wisconsin/629-D00575/2009/05/16    
  82 >A/Brandenburg/19/2009/05/02          ................................................................G.....................- .....................................................................................  7, 2, 1, 1 Brandenburg/19/2009/05/02          
  83 >A/NY/3454/2009/05/11                 ................................................................G...................... .....................................................................................  1, 1, 1, 1 NY/3454/2009/05/11                 
  84 >A/NY/3455/2009/05/11                 ................................................................G...................... .....................................................................................  1, 1, 1, 1 NY/3455/2009/05/11                 
  85 >A/Toronto/3184/2009/04/              ................................................................G...................... .....................................................................................  1, 1, 1, 1 Toronto/3184/2009/04/              
  86 >A/Hamburg/4/2009//                   ................................................................G...................... .....................................................................................  1, 1, 1, 1 Hamburg/4/2009//                   
  87 >A/NY/3460/2009/05/04                 ................................................................G...................... .....................................................................................  1, 1, 1, 1 NY/3460/2009/05/04                 
  88 >A/NY/3323/2009/05/06                 ................................................................G...................... .....................................................................................  1, 1, 1, 1 NY/3323/2009/05/06                 
  89 >A/NY/3574/2009/05/17                 ................................................................G...................... .....................................................................................  2, 1, 2, 1 NY/3574/2009/05/17                 
  90 >A/Toronto/3141/2009/04/24            ................................................................G...................... .....................................................................................  2, 1, 2, 1 Toronto/3141/2009/04/24            
  91 >A/Canada-NS/RV1551/2009/04/29        ................................................................G...................... ..............................................................C......................  2, 2, 2, 2 Canada-NS/RV1551/2009/04/29        
  92 >A/Canada-NS/RV1538/2009//            ................................................................G...................... ..............................................................C......................  3, 2, 3, 2 Canada-NS/RV1538/2009//            
  93 >A/Canada-NS/RV1535/2009/04/24        ................................................................G...................... ...................T..........................................C......................  3, 3, 3, 3 Canada-NS/RV1535/2009/04/24        
  94 >A/Canada-NS/RV1554/2009/04/29        ................................................................G...................... ...................T..........................................C......................  3, 3, 3, 3 Canada-NS/RV1554/2009/04/29        
  95 >A/Canada-NS/RV1565/2009/04/30        ................................................................G...................... ...................T..........................................C......................  3, 3, 3, 3 Canada-NS/RV1565/2009/04/30        
  96 >A/Canada-NS/RV1536/2009//            ................................................................G...................... ...................T..........................................C......................  4, 3, 4, 3 Canada-NS/RV1536/2009//            
  97 >A/Kansas/03/2009/04/24               ................................................................G...................... .........T...........................................................................  2, 2, 2, 2 Kansas/03/2009/04/24               
  98 >A/NY/1669/2009/04/26                 ................................................................G...................... .....................................................................................  2, 1, 2, 1 NY/1669/2009/04/26                 
  99 >A/NY/3443/2009/05/01                 ................................................................G...................... ..................................................T..C...............................  3, 3, 3, 3 NY/3443/2009/05/01                 
 100 >A/Mexico/4486/2009/04/14             ................................................................G...................... .....................................................................................  7, 1, 3, 1 Mexico/4486/2009/04/14             
 101 >A/Catalonia/63/2009//                ................................................................G...................... .....................................................................................  4, 1, 4, 1 Catalonia/63/2009//                
 102 >A/Wisconsin/629-D00244/2009/05/02    ................................................................G...................... .....C...............................................................................  3, 2, 3, 2 Wisconsin/629-D00244/2009/05/02    
 103 >A/Mexico/4269/2009/04/15             ................................................................G...................... .....C...............................................................................  3, 2, 3, 2 Mexico/4269/2009/04/15             
 104 >A/Wisconsin/629-D00967/2009/05/16    ..............................................................A........................ .....................................................................................  1, 1, 1, 1 Wisconsin/629-D00967/2009/05/16    
 105 >A/Wisconsin/629-D00064/2009/05/14    ..............................................................A........................ .....................................................................................  1, 1, 1, 1 Wisconsin/629-D00064/2009/05/14    
 106 >A/Wisconsin/629-D02141/2009/04/30    ....................................................................................... .....................................................................................  1, 0, 1, 0 Wisconsin/629-D02141/2009/04/30    
 107 >A/Wisconsin/629-D00767/2009/04/30    ...............................T....................................................... .....................................................................................  1, 1, 1, 1 Wisconsin/629-D00767/2009/04/30    
 108 >A/Wisconsin/629-D02272/2009/05/04    ...............................T....................................................... .....................................................................................  2, 1, 2, 1 Wisconsin/629-D02272/2009/05/04    
 109 >A/Wisconsin/629-D00160/2009/05/19    ....................A..........T....................................................... .....................................................................................  3, 2, 3, 2 Wisconsin/629-D00160/2009/05/19    
 110 >A/Wisconsin/629-D00807/2009/05/04    ....................A..........T....................................................... .....................................................................................  3, 2, 3, 2 Wisconsin/629-D00807/2009/05/04    
 111 >A/Hunan/SWL3/2009/06/13              ....................A..........T...........G........................................... .....................................................................................  4, 3, 4, 3 Hunan/SWL3/2009/06/13              
 112 >A/Niigata/700/2009/06/22             ...........................................G.........................................C. .................................................................T...................  3, 3, 3, 3 Niigata/700/2009/06/22             
 113 >A/Utsunomiya/2/2009/06/16            ...........................................G.........................................C. ...............................................................T.T...................  4, 4, 4, 4 Utsunomiya/2/2009/06/16            
 114 >A/Utsunomiya/1/2009/06/16            ...........................................G.........................................C. ...............................................................T.T...................  4, 4, 4, 4 Utsunomiya/1/2009/06/16            
 115 >A/Canada-QC/RV1954/2009/05/17        ....................................................................................... ...........................................................G.........................  1, 1, 1, 1 Canada-QC/RV1954/2009/05/17        
 116 >A/Mexico/4635/2009/04/20             ....................................................................................... .......G.............................................................................  1, 1, 1, 1 Mexico/4635/2009/04/20             
 117 >A/Wisconsin/629-D02262/2009/05/02    ....................................................................................... .....................................................................................  1, 0, 1, 0 Wisconsin/629-D02262/2009/05/02    
 118 >A/Netherlands/602/2009/04/29         ....................................................................................... .....................................................................................  1, 0, 1, 0 Netherlands/602/2009/04/29         
 119 >A/Wisconsin/629-D02361/2009/04/30    ....................................................................................... .....................................................................................  1, 0, 1, 0 Wisconsin/629-D02361/2009/04/30    
 120 >A/Wisconsin/629-D01251/2009/05/04    ....................................................................................... ................................................G....................................  1, 1, 1, 1 Wisconsin/629-D01251/2009/05/04    
 121 >A/Wisconsin/629-D00183/2009/05/04    ....................................................................................... ................................................G....................................  2, 1, 2, 1 Wisconsin/629-D00183/2009/05/04    
 122 >A/Wisconsin/629-D01415/2009/05/04    ......................................A................................................ ................................................G....................................  2, 2, 2, 2 Wisconsin/629-D01415/2009/05/04    
 123 >A/Arizona/01/2009/04/22              ........................A.............................................................. ................................................G....................................  3, 2, 3, 2 Arizona/01/2009/04/22              
 124 >A/Narita/1/2009/05/08                ........................A.............................................................. .....................................G...............................................  2, 2, 2, 2 Narita/1/2009/05/08                
 125 >A/Beijing/01/2009/05/16              ........................A.............................................................. .....................................G...............................................  2, 2, 2, 2 Beijing/01/2009/05/16              
 126 >A/Beijing/02/2009/05/16              ........................A.............................................................. .....................................G...............................................  2, 2, 2, 2 Beijing/02/2009/05/16              
 127 >A/Toronto/C2781/2009/05/09           ........................A.............................................................. .....................................G...............................................  3, 2, 3, 2 Toronto/C2781/2009/05/09           
 128 >A/Tennessee/05/2009/04/28            ........................A................................G............................. .....................................G...............................................  3, 3, 3, 3 Tennessee/05/2009/04/28            
 129 >A/Beijing/01/2009/05/15              ........................A.............................................................. .....................................G.........................................T.....  3, 3, 3, 3 Beijing/01/2009/05/15              
 130 >A/Bayern/62/2009/04/29               ........................A......................................................G.....-- ..........G..........................G...............................................  9, 6, 4, 4 Bayern/62/2009/04/29               
 131 >A/Regensburg/D6/2009//               ........................A......................................................G......- ..........G..........................G...............................................  6, 5, 4, 4 Regensburg/D6/2009//               
 132 >A/England/195/2009/04/28             ........................A......................................................G....... ..........G..........................G...............................................  4, 4, 4, 4 England/195/2009/04/28             
 133 >A/NY/3709/2009/05/28                 ........................A......................................................G....... ..........G..........................G...............................................  4, 4, 4, 4 NY/3709/2009/05/28                 
 134 >A/NY/3181/2009/04/28                 ........................A......................................................G....... ..........G..........................G...............................................  4, 4, 4, 4 NY/3181/2009/04/28                 
 135 >A/Canada-PQ/RV1586/2009/04/26        ........................A......................................................G....... ..........G..........................G...............................................  4, 4, 4, 4 Canada-PQ/RV1586/2009/04/26        
 136 >A/NY/3177/2009/05/02                 .....................A..A......................................................G....... ..........G..........................G...............................................  5, 5, 5, 5 NY/3177/2009/05/02                 
 137 >A/NY/3967/2009/06/09                 .....................A..A......................................................G....... ..........G..........................G...............................................  7, 5, 7, 5 NY/3967/2009/06/09                 
 138 >A/Paris/2592/2009/05/01              ........................A......................................................G....... T.........G..........................G...............................................  5, 5, 5, 5 Paris/2592/2009/05/01              
 139 >A/Paris/2580/2009/04/30              ........................A......................................................G....... T.........G..........................G...............................................  6, 5, 6, 5 Paris/2580/2009/04/30              
 140 >A/South Carolina/09/2009/04/26       ........................A..........A...........................................G....... ..........G..........................G...............................................  5, 5, 5, 5 South Carolina/09/2009/04/26       
 141 >A/NY/3577/2009/05/19                 ........................A......................................................G....... ..........G..........................G...............................................  6, 4, 6, 4 NY/3577/2009/05/19                 
 142 >A/Wisconsin/629-D01313/2009/05/08    ........................A...............................T.............................. ..........G..........................G...................G...........................  5, 5, 5, 5 Wisconsin/629-D01313/2009/05/08    
 143 >A/Sichuan/1/2009/05/10               ........................A...............................T.............................. ..........G..........................G...................G...........................  5, 5, 5, 5 Sichuan/1/2009/05/10               
 144 >A/Vladivostok/IIV17/2009/07/22       ........................A...............................T...........................C.. ..........G......G...................G...................G...........................  7, 7, 7, 7 Vladivostok/IIV17/2009/07/22       
 145 >A/Vladivostok/IIV18/2009/07/24       ........................A...............................T...........................C.. ..........G......G...................G...................G...........................  7, 7, 7, 7 Vladivostok/IIV18/2009/07/24       
 146 >A/Nanjing/2/2009/06/17               ........................A...............................T.............................. ..........G..........................G............T......G...........................  8, 6, 8, 6 Nanjing/2/2009/06/17               
 147 >A/Wisconsin/629-D02013/2009/05/30    ........................A...............................T.............................. ..........G..........................G...................G...........................  8, 5, 8, 5 Wisconsin/629-D02013/2009/05/30    
 148 >A/Zhejiang/DTID-ZJU01/2009/06/       ........................A.............................................................. ..........G..............................................G...........................  4, 3, 4, 3 Zhejiang/DTID-ZJU01/2009/06/       
 149 >A/Wisconsin/629-D00790/2009/05/04    ........................AA............................................................. .....................................................................................  2, 2, 2, 2 Wisconsin/629-D00790/2009/05/04    
 150 >A/Wisconsin/629-D01226/2009/05/04    ........................AA............................................................. .....................................................................................  2, 2, 2, 2 Wisconsin/629-D01226/2009/05/04    
 151 >A/Wisconsin/629-D00722/2009/05/19    ........................AA............................................................. .....................................................................................  2, 2, 2, 2 Wisconsin/629-D00722/2009/05/19    
 152 >A/Wisconsin/629-D02312/2009/05/02    ........................AA............................................................. .....................................................................................  3, 2, 3, 2 Wisconsin/629-D02312/2009/05/02    
 153 >A/Wisconsin/629-D01606/2009/05/03    ........................AA............................................................. .....................................................................................  3, 2, 3, 2 Wisconsin/629-D01606/2009/05/03    
 154 >A/Paris/2573/2009/04/29              ........................AA............................................................. T....................................................................................  3, 3, 3, 3 Paris/2573/2009/04/29              
 155 >A/Wisconsin/629-D02452/2009/05/08    ........................AA............................................................. .....................................................................................  4, 2, 4, 2 Wisconsin/629-D02452/2009/05/08    
 156 >A/Wisconsin/629-D01787/2009/05/20    ....................................................................................... .....................................................................................  1, 0, 1, 0 Wisconsin/629-D01787/2009/05/20    
 157 >A/Canada-PQ/RV1758/2009/05/08        ....................................................................................... .....................................................................................  1, 0, 1, 0 Canada-PQ/RV1758/2009/05/08        
 158 >A/Wisconsin/629-D02064/2009/05/22    ....................................................................................... .....................................................................................  1, 0, 1, 0 Wisconsin/629-D02064/2009/05/22    
 159 >A/Wisconsin/629-D01894/2009/05/26    ....................................................................................... .....................................................................................  1, 0, 1, 0 Wisconsin/629-D01894/2009/05/26    
 160 >A/Wisconsin/629-D00933/2009/05/02    .............................................A......................................... .....................................................................................  1, 1, 1, 1 Wisconsin/629-D00933/2009/05/02    
 161 >A/Wisconsin/629-D02408/2009/05/02    .............................................A......................................... .....................................................................................  1, 1, 1, 1 Wisconsin/629-D02408/2009/05/02    
 162 >A/Wisconsin/629-D01793/2009/05/01    .............................................A......................................... .....................................................................................  1, 1, 1, 1 Wisconsin/629-D01793/2009/05/01    
 163 >A/Wisconsin/629-D01482/2009/05/10    ....................................................................................... .....................................................................................  0, 0, 0, 0 Wisconsin/629-D01482/2009/05/10    
 164 >A/Wisconsin/629-D00752/2009/05/19    ................A...................................................................... .....................................................................................  1, 1, 1, 1 Wisconsin/629-D00752/2009/05/19    
 165 >A/Wisconsin/629-D01705/2009/05/03    ....................................................................................... .....................................................................................  1, 0, 1, 0 Wisconsin/629-D01705/2009/05/03    
 166 >A/Shiga/1/2009/05/22                 ....................................................................................... .................................................................................A...  1, 1, 1, 1 Shiga/1/2009/05/22                 
 167 >A/Texas/04/2009/04/14                ..................................................A.................................... ...............C.....................................................................  2, 2, 2, 2 Texas/04/2009/04/14                
 168 >A/Texas/08/2009/04/24                ..................................................A.................................... ...............C.....................................................................  2, 2, 2, 2 Texas/08/2009/04/24                
 169 >A/North Carolina/05/2009/04/28       ..................................................A.................................... ...............C.....................................................................  2, 2, 2, 2 North Carolina/05/2009/04/28       
 170 >A/San Antonio/PR922/2009/04/15       ..................................................A.................................... ...............C.....................................................................  2, 2, 2, 2 San Antonio/PR922/2009/04/15       
 171 >A/Texas/06/2009/04/23                ..................................................A.................................... ...............C.....................................................................  2, 2, 2, 2 Texas/06/2009/04/23                
 172 >A/San Antonio/PR923/2009/04/23       ...C..............................................A.................................... ...............C.....................................................................  3, 3, 3, 3 San Antonio/PR923/2009/04/23       
 173 >A/San Antonio/PR921/2009/04/14       ...C..............................................A.................................... ...............C.....................................................................  3, 3, 3, 3 San Antonio/PR921/2009/04/14       
 174 >A/Kansas/02/2009/04/24               ..C...............................................A.................................... ...............C.....................................................................  3, 3, 3, 3 Kansas/02/2009/04/24               
 175 >A/Texas/22/2009/04/26                ..C...............................................A.................................... ...............C.....................................................................  3, 3, 3, 3 Texas/22/2009/04/26                
 176 >A/Texas/09/2009/04/25                ..C...............................................A.................................... ...............C.....................................................................  3, 3, 3, 3 Texas/09/2009/04/25                
 177 >A/Texas/05/2009/04/15                ..................................................A..................................-- ...............C.....................................................................  7, 4, 3, 2 Texas/05/2009/04/15                
 178 >A/Beijing/3/2009/05/20               ..........................................A............................................ .....................................................................................  2, 1, 2, 1 Beijing/3/2009/05/20               
 179 >A/Wisconsin/629-D02276/2009/05/27    ....................................................................................... .....................................................................................  2, 0, 2, 0 Wisconsin/629-D02276/2009/05/27    
 180 >A/Iowa/04/2009/04/24                 ..........................................................G............................ .....................................................................................  2, 1, 2, 1 Iowa/04/2009/04/24                 
 181 >A/Beijing/4/2009/05/23               ........................A.................................G............................ .....................................G...............................................  4, 3, 4, 3 Beijing/4/2009/05/23               
 182 >A/Kanagawa/140/2009/06/18            ........................A.................................G............................ .....................................G...............................................  5, 3, 5, 3 Kanagawa/140/2009/06/18            
 183 >A/Toronto/0462/2009/05/26            .............A..........A.............................................T................ .....................................G...............................................  4, 4, 4, 4 Toronto/0462/2009/05/26            
 184 >A/CA/08/2009/04/09                   ...............................................G.........................C............. .....................................................................................  2, 2, 2, 2 CA/08/2009/04/09                   
 185 >A/CA/07/2009/04/09                   ...............................................G.........................C............. .....................................................................................  2, 2, 2, 2 CA/07/2009/04/09                   
 186 >A/CA/04/2009/04/01                   ...............................................G.........................C............. .............................................................A.......................  3, 3, 3, 3 CA/04/2009/04/01                   
 187 >A/Fukuoka-C/3/2009/06/07             .........................................A.....G.........................C............. .............................................................A.......................  4, 4, 4, 4 Fukuoka-C/3/2009/06/07             
 188 >A/Kagoshima/1/2009/06/13             .........................................A.....G.........................C............. .............................................................A.......................  4, 4, 4, 4 Kagoshima/1/2009/06/13             
 189 >A/Fukuoka-C/2/2009/06/07             .........................................A.....G.........................C............. .............................................................A..........G............  5, 5, 5, 5 Fukuoka-C/2/2009/06/07             
 190 >A/Fukuoka-C/1/2009/06/07             .........................................A.....G.........................C............. .............................................................A..........G............  5, 5, 5, 5 Fukuoka-C/1/2009/06/07             
 191 >A/Texas/15/2009/04/15                ...................................A...........G....................................... .....................................................................................  2, 2, 2, 2 Texas/15/2009/04/15                
 192 >A/NY/3307/2009/05/01                 ...............................................G....................................... .....................................................................................  3, 1, 3, 1 NY/3307/2009/05/01                 
 193 >A/Brawley/40081/2009/04/22           ....................................................................................... ..................T..................................................................  2, 1, 2, 1 Brawley/40081/2009/04/22           
 194 >A/Sachsen-Anhalt/101/2009/05/04      ...........T..................................G..............G......................... ..................T..................................................................  4, 4, 4, 4 Sachsen-Anhalt/101/2009/05/04      
 195 >A/Sachsen-Anhalt/97/2009/05/06       ...........T..................................G..............G........................- ..................T.................................................................. 10, 5, 4, 4 Sachsen-Anhalt/97/2009/05/06       
 196 >A/NY/3498/2009/05/12                 ..................................T.................................................... .........................A.....................................................T.....  3, 3, 3, 3 NY/3498/2009/05/12                 
 197 >A/Taiwan/T1773/2009/05/28            ..................................T.................................................... .........................A.....................................................T.....  3, 3, 3, 3 Taiwan/T1773/2009/05/28            
 198 >A/NY/3514/2009/05/14                 ..................................T.................................................... .........................A.....................................................T.....  3, 3, 3, 3 NY/3514/2009/05/14                 
 199 >A/NY/3499/2009/05/16                 ..................................T.................................................... .........................A.....................................................T.....  3, 3, 3, 3 NY/3499/2009/05/16                 
 200 >A/Canada-MB/RV2023/2009/05/24        ..................................T.................................................... ................T........A.....................................................T.....  4, 4, 4, 4 Canada-MB/RV2023/2009/05/24        
 201 >A/Toronto/T5362/2009/06/09           ..................................T.................................................... ................T........A.....................................................T.....  4, 4, 4, 4 Toronto/T5362/2009/06/09           
 202 >A/Toronto/T9842/2009/06/17           ..................................T.................................................... ................T........A.....................................................T.....  5, 4, 5, 4 Toronto/T9842/2009/06/17           
 203 >A/NY/4197/2009/06/17                 ..................................T.................................................... .........................A.....................................................T.....  4, 3, 4, 3 NY/4197/2009/06/17                 
 204 >A/Shanghai/143T/2009//               ..................................T.................................................... .........................A.............................................C.......T.....  4, 4, 4, 4 Shanghai/143T/2009//               
 205 >A/NY/3337/2009/05/04                 .......A..........................T.................................................... .........................A.....................................................T.....  4, 4, 4, 4 NY/3337/2009/05/04                 
 206 >A/NY/3449/2009/05/13                 .......A..........................T.................................................... .........................A.....................................................T.....  4, 4, 4, 4 NY/3449/2009/05/13                 
 207 >A/NY/3338/2009/05/04                 .......A..........................T.................................................... .........................A.....................................................T.....  5, 4, 5, 4 NY/3338/2009/05/04                 
 208 >A/NY/4014/2009/06/10                 .......A..........................T.................................................... .........................A.....................................................TG....  5, 5, 5, 5 NY/4014/2009/06/10                 
 209 >A/NY/3576/2009/05/21                 .......A..........................T.................................................... .........................A.....................................................TG....  5, 5, 5, 5 NY/3576/2009/05/21                 
 210 >A/NY/3573/2009/05/21                 .......A..........................T.................................................... .........................A.....................................................TG....  5, 5, 5, 5 NY/3573/2009/05/21                 
 211 >A/NY/3654/2009/05/26                 .......A..........................T.................................................... .........................A.....................................................TG....  6, 5, 6, 5 NY/3654/2009/05/26                 
 212 >A/Tokushima/1/2009/06/02             .......A..........................T.................................................... .........................A.....................................................TG....  7, 5, 7, 5 Tokushima/1/2009/06/02             
 213 >A/NY/3389/2009/05/08                 ...A...A..........................T.................................................... .........................A.....................................................T.....  5, 5, 5, 5 NY/3389/2009/05/08                 
 214 >A/Paris/2722/2009/06/02              ..................................T.................................................... .........................A.....................................................T.....  4, 3, 4, 3 Paris/2722/2009/06/02              
 215 >A/NY/3653/2009/05/21                 ..................................T.................................................... .........................A.....................................................T.....  4, 3, 4, 3 NY/3653/2009/05/21                 
 216 >A/Canada-MB/RV2013/2009/05/28        ..................................T.................................................... .........................A.....................................................T.....  4, 3, 4, 3 Canada-MB/RV2013/2009/05/28        
 217 >A/Rhode Island/02/2009/04/28         ..................................T.................................................... .........................A.....................................................T.....  4, 3, 4, 3 Rhode Island/02/2009/04/28         
 218 >A/NY/3348/2009/04/28                 ..................................T.................................................... .........................A.....................................................T.....  4, 3, 4, 3 NY/3348/2009/04/28                 
 219 >A/Shizuoka/793/2009/06/15            ..................................T.................................................... .........................A.....................................................T.....  4, 3, 4, 3 Shizuoka/793/2009/06/15            
 220 >A/Rhode Island/07/2009//             ..................T...............T.................................................... .........................A.....................................................T.....  5, 4, 5, 4 Rhode Island/07/2009//             
 221 >A/Italy/127/2009/06/17               ..................................T.................................................... .........................A.....................................................T.....  5, 3, 5, 3 Italy/127/2009/06/17               
 222 >A/NY/3352/2009/05/06                 ..................................T.................................................... ...T.....................A.....................................................T.....  5, 4, 5, 4 NY/3352/2009/05/06                 
 223 >A/NY/3753/2009/06/01                 .......A..........................T.................................................... .........................A.....................................................T.....  6, 4, 6, 4 NY/3753/2009/06/01                 
 224 >A/NY/3751/2009/06/01                 .......A..........................T.................................................... .........................A.....................................................T.....  7, 4, 7, 4 NY/3751/2009/06/01                 
 225 >A/Shandong/1/2009/05/10              ..................................T........................A........................... ................T........A.....................................................T....G  6, 6, 6, 6 Shandong/1/2009/05/10              
 226 >A/Canada-MB/RV1982/2009/05/21        ..................................T........................A........................... ................T........A.....................................................T....G  7, 6, 7, 6 Canada-MB/RV1982/2009/05/21        
 227 >A/Canada-MB/RV2020/2009/05/30        T.................................T........................A........................... ................T........A.....................................................T.....  6, 6, 6, 6 Canada-MB/RV2020/2009/05/30        
 228 >A/Canada-MB/RV1977/2009/05/22        T.................................T........................A........................... ................T........A.....................................................T.....  6, 6, 6, 6 Canada-MB/RV1977/2009/05/22        
 229 >A/Canada-MB/RV1964/2009/05/20        T.................................T........................A........................... ................T........A.....................................................T.....  6, 6, 6, 6 Canada-MB/RV1964/2009/05/20        
 230 >A/Canada-SK/RV2486/2009/07/01        ..................................T.................................................... ................T........A.....................................................T.....  6, 4, 6, 4 Canada-SK/RV2486/2009/07/01        
 231 >A/NY/3324/2009/05/06                 ..................................T.................................................... .........................A.............................................C....C..T.....  6, 5, 6, 5 NY/3324/2009/05/06                 
 232 >A/Silver Spring/SP509/2009/06/18     ...........................G......T.................................................... .........................A...........................................G.........A.....  5, 5, 5, 5 Silver Spring/SP509/2009/06/18     
 233 >A/Silver Spring/SP510/2009/06/18     ...C.......................G......T.................................................... .........................A...........................................G.........A.....  6, 6, 6, 6 Silver Spring/SP510/2009/06/18     
 234 >A/Wisconsin/629-D01305/2009/05/13    .......................................G............................................... .......................................C...............A.............................  3, 3, 3, 3 Wisconsin/629-D01305/2009/05/13    
 235 >A/Wisconsin/629-D01055/2009/05/09    .......................................G............................................... .......................................C..............CA.............................  4, 4, 4, 4 Wisconsin/629-D01055/2009/05/09    
 236 >A/Wisconsin/629-D02227/2009/05/16    .......................................G............................................... .......................................C..............CA.............................  5, 4, 5, 4 Wisconsin/629-D02227/2009/05/16    
 237 >A/Wisconsin/629-D01092/2009/05/03    .......................................G............................................... .......................................C...............A.............................  4, 3, 4, 3 Wisconsin/629-D01092/2009/05/03    
 238 >A/Mexico/InDRE4114/2009//            ............A.......................................................................... ..........................................................G..........................  3, 2, 3, 2 Mexico/InDRE4114/2009//            
 239 >A/Delaware/03/2009/04/28             ..........................A.....A...................................................... ............................A........................................................  3, 3, 3, 3 Delaware/03/2009/04/28             
 240 >A/Delaware/02/2009/04/28             ........G.................A.....A...................................................... ............................A........................................................  4, 4, 4, 4 Delaware/02/2009/04/28             
 241 >A/New Hampshire/02/2009/04/28        ........G.................A.....A...................................................... ............................A..................................................T.....  5, 5, 5, 5 New Hampshire/02/2009/04/28        
 242 >A/Michigan/02/2009/04/26             ........G.......T...................................................................... ..........................................................................T..........  4, 3, 4, 3 Michigan/02/2009/04/26             
 243 >A/Texas/07/2009/04/25                ...................................................................C................... ..........................................................................T..........  4, 2, 4, 2 Texas/07/2009/04/25                
 244 >A/Mexico/InDRE13551/2009/04/28       ....................................................................................... .....................................................................................  3, 0, 3, 0 Mexico/InDRE13551/2009/04/28       
 245 >A/Mexico/InDRE13547/2009/04/27       ....................................................................................... .....................................................................................  3, 0, 3, 0 Mexico/InDRE13547/2009/04/27       
 246 >A/Paris/2629/2009/05/11              ....................................................................................... ...................................................................................A.  3, 1, 3, 1 Paris/2629/2009/05/11              
 247 >A/Florida/04/2009/04/27              .T..................................................................................... ...................................................................................A.  3, 2, 3, 2 Florida/04/2009/04/27              
 248 >A/Arizona/02/2009/04/26              ..................................................................R..G................. .....................G.............................................................A.  5, 4, 5, 4 Arizona/02/2009/04/26              
 249 >A/Nanjing/1/2009/06/18               ....................................................................................... .....................................................................................  3, 0, 3, 0 Nanjing/1/2009/06/18               
 250 >A/Canada-SK/RV1794/2009/05/07        ....................................................................................... ......................G......................T......G................................  3, 3, 3, 3 Canada-SK/RV1794/2009/05/07        
 251 >A/Canada-SK/RV1797/2009/05/07        ....................................................................................... ......................G......................T......G................................  3, 3, 3, 3 Canada-SK/RV1797/2009/05/07        
 252 >A/Canada-SK/RV1788/2009/04/30        ....................................................................................... ......................G......................T......G................................  3, 3, 3, 3 Canada-SK/RV1788/2009/04/30        
 253 >A/Canada-SK/RV1793/2009/05/08        .....................R................................................................. ......................G......................T......G................................  4, 4, 4, 4 Canada-SK/RV1793/2009/05/08        
 254 >A/Canada-SK/RV1798/2009/05/06        ............................................................A.......................... ......................G......................T......G................................  4, 4, 4, 4 Canada-SK/RV1798/2009/05/06        
 255 >A/Italy/05/2009/05/03                ....................................................................................... .............................................................A.......................  3, 1, 3, 1 Italy/05/2009/05/03                
 256 >A/THA/104/2009/05/06                 ........................................G............G................................. ....................................G................................................  3, 3, 3, 3 THA/104/2009/05/06                 
 257 >A/Nonthaburi/102/2009/05/            ........................................G............G................................. ....................................G................................................  4, 3, 4, 3 Nonthaburi/102/2009/05/            
 258 >A/Wisconsin/629-D00223/2009/05/30    ....................................................................................... .....................................................................................  3, 0, 3, 0 Wisconsin/629-D00223/2009/05/30    
 259 >A/Wisconsin/629-D02473/2009/05/03    ....................................................................................... ................................................................G....................  4, 1, 4, 1 Wisconsin/629-D02473/2009/05/03    
 260 >A/Canada-QC/RV1595/2009/04/16        ...............A....................................................................... ........................A............................................................  4, 2, 4, 2 Canada-QC/RV1595/2009/04/16        
 261 >A/Paris/2591/2009/05/01              ...................................................................T................... ........................................................G............................  4, 2, 4, 2 Paris/2591/2009/05/01              
 262 >A/Niigata/690/2009/06/15             ...............................................................G....................... .....................................................................................  4, 1, 4, 1 Niigata/690/2009/06/15             
 263 >A/Himeji/1/2009/05/18                ....................................................................C......A........... ..........................A................................................C.........  4, 4, 4, 4 Himeji/1/2009/05/18                
 264 >A/Amagasaki/2/2009//                 ....................................................................C......A........... ..........................A................................................C.........  4, 4, 4, 4 Amagasaki/2/2009//                 
 265 >A/Osaka-C/2/2009/05/17               ....................................................................C......A........... ..........................A................................................C.........  4, 4, 4, 4 Osaka-C/2/2009/05/17               
 266 >A/Hyogo/1/2009/05/17                 ....................................................................C......A........... ..........................A................................................C.........  4, 4, 4, 4 Hyogo/1/2009/05/17                 
 267 >A/Sakai/1/2009/05/21                 ....................................................................C......A........... ..........................A................................................C.........  4, 4, 4, 4 Sakai/1/2009/05/21                 
 268 >A/Osaka/2/2009/05/16                 ....................................................................C......A........... ..........................A................................................C.........  4, 4, 4, 4 Osaka/2/2009/05/16                 
 269 >A/Shiga/2/2009/05/19                 ....................................................................C......A........... ..........................A................................................C.........  5, 4, 5, 4 Shiga/2/2009/05/19                 
 270 >A/Amagasaki/1/2009//                 ....................................................................C......A........... ..........................A................................................C.........  5, 4, 5, 4 Amagasaki/1/2009//                 
 271 >A/Kobe/1/2009//                      ....................................................................C......A........... ..........................A................................................C.........  5, 4, 5, 4 Kobe/1/2009//                      
 272 >A/Osaka/1/2009/05/16                 ....................................................................C......A........... ..........................A................................................C.........  5, 4, 5, 4 Osaka/1/2009/05/16                 
 273 >A/Osaka/180/2009//                   ....................................................................C......A........... ..........................A................................................C.........  5, 4, 5, 4 Osaka/180/2009//                   
 274 >A/Osaka-C/1/2009/05/16               ....................................................................C......A........... ..........................A................................................C.........  5, 4, 5, 4 Osaka-C/1/2009/05/16               
 275 >A/Hyogo/2/2009/05/17                 ....................................................................C......A........... ..........................A................................................C.........  5, 4, 5, 4 Hyogo/2/2009/05/17                 
 276 >A/Sakai/2/2009/05/21                 ....................................................................C......A........... ..........................A................................................C.........  6, 4, 6, 4 Sakai/2/2009/05/21                 
 277 >A/NY/3074/2009/04/29                 ................................................................G...................... .....................................................................................  4, 1, 4, 1 NY/3074/2009/04/29                 
 278 >A/GuangzhouSB/01/2009/05/18          ......................................................CG........G...................... ......................................A..............................................  4, 4, 4, 4 GuangzhouSB/01/2009/05/18          
 279 >A/Washington/14/2009/05/07           ......................................................CG........G....................-- ......................................A..............................................  8, 6, 4, 4 Washington/14/2009/05/07           
 280 >A/GuangzhouSB/01/2009/05/17          ...................................................T..CG........G...................... ......................................A..............................................  6, 5, 6, 5 GuangzhouSB/01/2009/05/17          
 281 >A/Washington/28/2009//               ......................................................CG........G...................... ......................................A..............................................  7, 4, 7, 4 Washington/28/2009//               
 282 >A/Washington/29/2009//               ......................................................CG........G...........G.......... ......................................A..............................................  7, 5, 7, 5 Washington/29/2009//               
 283 >A/NY/3240/2009//                     ................................................................G...................... ......................................................C..............................  4, 2, 4, 2 NY/3240/2009//                     
 284 >A/Missouri/04/2009/05/10             ................................................................G...................... .........................................C...........................................  6, 2, 6, 2 Missouri/04/2009/05/10             
 285 >A/Jiangsu/1/2009/06/15               ....................................................T...........G...................... ..A...........................................................C......................  6, 4, 6, 4 Jiangsu/1/2009/06/15               
 286 >A/Auckland/1/2009/04/25              ......A...............................................................................- .....................................................................................  6, 2, 4, 1 Auckland/1/2009/04/25              
 287 >A/NY/3178/2009/04/28                 ....................................................................................... .........T...........................................................................  4, 1, 4, 1 NY/3178/2009/04/28                 
 288 >A/Paris/2650/2009/05/17              .........................T....T........................................T............... ..............................................G....C.................................  5, 5, 5, 5 Paris/2650/2009/05/17              
 289 >A/Canada-AB/RV1644/2009/05/01        .........................T....T........................................T............... ..............................................G....C.................................  5, 5, 5, 5 Canada-AB/RV1644/2009/05/01        
 290 >A/Mexico/InDRE13555/2009/04/29       ....................................................................................... ..................................A...................................G..............  5, 2, 5, 2 Mexico/InDRE13555/2009/04/29       
 291 >A/Indiana/09/2009/04/22              ..................................................................A.................... .........................A................................................T..........  5, 3, 5, 3 Indiana/09/2009/04/22              
 292 >A/Alabama/02/2009/04/27              ........................A................................G............................. .....................................G....A..........................................  6, 4, 6, 4 Alabama/02/2009/04/27              
 293 >A/Paris/2709/2009/06/02              ..........G.............A...............................................C.............. ..........G..........................G.....C.....................T...................  7, 7, 7, 7 Paris/2709/2009/06/02              
 294 >A/Santo Domingo/568T/2009/05/26      ..........G.............A...............................................C.............. ..........G..........................G.....C.....................T...................  8, 7, 8, 7 Santo Domingo/568T/2009/05/26      
 295 >A/Santo Domingo/565T/2009/05/26      ...C......G.............A...............................................C.............. ..........G..........................G.....C.....................T...................  8, 8, 8, 8 Santo Domingo/565T/2009/05/26      
 296 >A/Santo Domingo/572N/2009/05/24      ...C......G.............A...............................................C.............. ..........G..........................G.....C.....................T...................  9, 8, 9, 8 Santo Domingo/572N/2009/05/24      
 297 >A/Santo Domingo/0573N/2009/05/24     ...C......G.............A...............................................C.............. ..........G..........................G.....C.....................T..............G.... 10, 9,10, 9 Santo Domingo/0573N/2009/05/24     
 298 >A/Managua/0536N/2009/06/26           ...............................................G....................................... ..........G..........................G...............................................  6, 3, 6, 3 Managua/0536N/2009/06/26           
 299 >A/Norway/1168/2009/05/07             ........................A............C.........................................G....... ..AGA.....G..........................G............................................... 11, 8, 8, 8 Norway/1168/2009/05/07             
 300 >A/Norway/1177/2009/05/08             ........................A............C.........................................G....... --AGA.....G..........................G............................................... 22,10,10, 8 Norway/1177/2009/05/08             
 301 >A/Toronto/R8564/2009/07/06           .......................GA.................................G............................ .....................................G...............................................  7, 4, 7, 4 Toronto/R8564/2009/07/06           
 302 >A/Shizuoka-C/97/2009/05/26           ....................................................................................... .....................................................................................  6, 0, 6, 0 Shizuoka-C/97/2009/05/26           
 303 >A/Texas/23/2009/04/27                ....................................................T.................................. .............A.......................................................................  6, 2, 6, 2 Texas/23/2009/04/27                
 304 >A/Wakayama/57/2009/07/13             ..................................T.................................................... .......................T................A............................................  6, 3, 6, 3 Wakayama/57/2009/07/13             
 305 >A/THA/CU-B5/2009/06/13               ..................................T.................................................... .....................G...A.....................................................T.....  8, 4, 8, 4 THA/CU-B5/2009/06/13               
 306 >A/Mexico/InDRE13494/2009/04/29       ....................................................................................... ............................................................................C........  6, 1, 6, 1 Mexico/InDRE13494/2009/04/29       
 307 >A/CA/06/2009/04/16                   ..................................................................................T.... ..........................................................G..........................  7, 2, 7, 2 CA/06/2009/04/16                   
 308 >A/Paris/2590/2009/04/30              ........................AA............................................................. TT...................................................................................  7, 4, 7, 4 Paris/2590/2009/04/30              
 309 >A/Mexico/InDRE13495/2009/04/29       ........................A.............................................................. ..........................................A................G.........................  8, 3, 8, 3 Mexico/InDRE13495/2009/04/29       
 310 >A/Sw/Alberta/OTH-33-8/2009//         .........................T....T........................................T............... ...................................................C................................. 15, 4,15, 4 Sw/Alberta/OTH-33-8/2009//         
 311 >A/NY/3501/2009/05/17                 ...................................................................................A... .....................................................................................  1, 1, 1, 1 NY/3501/2009/05/17                 
 312 >A/NY/3796/2009/06/02                 ...................................................................................A... .....................................................................................  1, 1, 1, 1 NY/3796/2009/06/02                 
 313 >A/NY/3215/2009/04/25                 ...................................................................................A... .....................................................................................  1, 1, 1, 1 NY/3215/2009/04/25                 
 314 >A/NY/3617/2009/05/25                 ...................................................................................A... .....................................................................................  1, 1, 1, 1 NY/3617/2009/05/25                 
 315 >A/NY/3220/2009//                     ...................................................................................A... .....................................................................................  1, 1, 1, 1 NY/3220/2009//                     
 316 >A/Wisconsin/629-D01445/2009/05/24    ...................................................................................A... .....................................................................................  1, 1, 1, 1 Wisconsin/629-D01445/2009/05/24    
 317 >A/NY/3747/2009/05/16                 ...................................................................................A... .....................................................................................  1, 1, 1, 1 NY/3747/2009/05/16                 
 318 >A/NY/3218/2009//                     ...................................................................................A... .....................................................................................  1, 1, 1, 1 NY/3218/2009//                     
 319 >A/Michigan/06/2009/05/02             ...................................................................................A... .....................................................................................  1, 1, 1, 1 Michigan/06/2009/05/02             
 320 >A/NY/3188/2009/04/28                 ...................................................................................A... .....................................................................................  1, 1, 1, 1 NY/3188/2009/04/28                 
 321 >A/NY/3255/2009//                     ...................................................................................A... .....................................................................................  1, 1, 1, 1 NY/3255/2009//                     
 322 >A/NY/3201/2009//                     ...................................................................................A... .....................................................................................  1, 1, 1, 1 NY/3201/2009//                     
 323 >A/NY/3207/2009/04/26                 ...................................................................................A... .....................................................................................  1, 1, 1, 1 NY/3207/2009/04/26                 
 324 >A/NY/3828/2009/06/02                 ...................................................................................A... .....................................................................................  1, 1, 1, 1 NY/3828/2009/06/02                 
 325 >A/Italy/85/2009/06/14                ...................................................................................A... .....................................................................................  1, 1, 1, 1 Italy/85/2009/06/14                
 326 >A/NY/3819/2009/06/02                 ...................................................................................A... .....................................................................................  1, 1, 1, 1 NY/3819/2009/06/02                 
 327 >A/NY/3242/2009//                     ...................................................................................A... .....................................................................................  1, 1, 1, 1 NY/3242/2009//                     
 328 >A/NY/4072/2009/06/12                 ...................................................................................A... .....................................................................................  1, 1, 1, 1 NY/4072/2009/06/12                 
 329 >A/Hiroshima/200/2009/06/13           ...................................................................................A... .....................................................................................  1, 1, 1, 1 Hiroshima/200/2009/06/13           
 330 >A/NY/3227/2009/04/28                 ...................................................................................A... .....................................................................................  1, 1, 1, 1 NY/3227/2009/04/28                 
 331 >A/NY/3354/2009/05/08                 ...................................................................................A... .....................................................................................  1, 1, 1, 1 NY/3354/2009/05/08                 
 332 >A/NY/09/2009/04/25                   ...................................................................................A... .....................................................................................  1, 1, 1, 1 NY/09/2009/04/25                   
 333 >A/NY/19/2009/04/25                   ...................................................................................A... .....................................................................................  1, 1, 1, 1 NY/19/2009/04/25                   
 334 >A/NY/12/2009/04/25                   ...................................................................................A... .....................................................................................  1, 1, 1, 1 NY/12/2009/04/25                   
 335 >A/Bethesda/SP506/2009/06/16          ...................................................................................A... .....................................................................................  1, 1, 1, 1 Bethesda/SP506/2009/06/16          
 336 >A/NY/3252/2009//                     ...................................................................................A... .....................................................................................  1, 1, 1, 1 NY/3252/2009//                     
 337 >A/NY/3611/2009/05/21                 ...................................................................................A... .....................................................................................  1, 1, 1, 1 NY/3611/2009/05/21                 
 338 >A/NY/3231/2009//                     ...................................................................................A... .....................................................................................  1, 1, 1, 1 NY/3231/2009//                     
 339 >A/NY/3225/2009/04/27                 ...................................................................................A... .....................................................................................  1, 1, 1, 1 NY/3225/2009/04/27                 
 340 >A/NY/3176/2009/04/26                 ...................................................................................A... .....................................................................................  1, 1, 1, 1 NY/3176/2009/04/26                 
 341 >A/NY/3795/2009/06/01                 ...................................................................................A... .....................................................................................  1, 1, 1, 1 NY/3795/2009/06/01                 
 342 >A/Guangdong/05/2009/05/29            ...................................................................................A... .....................................................................................  1, 1, 1, 1 Guangdong/05/2009/05/29            
 343 >A/NY/3468/2009/05/17                 ...................................................................................A... .....................................................................................  1, 1, 1, 1 NY/3468/2009/05/17                 
 344 >A/NY/3243/2009//                     ...................................................................................A... .....................................................................................  1, 1, 1, 1 NY/3243/2009//                     
 345 >A/Quebec/147365/2009//               ...................................................................................A... .....................................................................................  1, 1, 1, 1 Quebec/147365/2009//               
 346 >A/NY/3313/2009/05/04                 ...................................................................................A... .....................................................................................  1, 1, 1, 1 NY/3313/2009/05/04                 
 347 >A/NY/3408/2009/05/02                 ...................................................................................A... .....................................................................................  1, 1, 1, 1 NY/3408/2009/05/02                 
 348 >A/NY/3365/2009/04/30                 ...................................................................................A... .....................................................................................  1, 1, 1, 1 NY/3365/2009/04/30                 
 349 >A/Canada-AB/RV1531/2009/04/28        ...................................................................................A... .....................................................................................  1, 1, 1, 1 Canada-AB/RV1531/2009/04/28        
 350 >A/NY/3237/2009/04/28                 ...................................................................................A... .....................................................................................  1, 1, 1, 1 NY/3237/2009/04/28                 
 351 >A/NY/3232/2009/04/30                 ...................................................................................A... .....................................................................................  1, 1, 1, 1 NY/3232/2009/04/30                 
 352 >A/NY/3230/2009/04/28                 ...................................................................................A... .....................................................................................  1, 1, 1, 1 NY/3230/2009/04/28                 
 353 >A/NY/31/2009/04/24                   ...................................................................................A... .....................................................................................  1, 1, 1, 1 NY/31/2009/04/24                   
 354 >A/NY/4057/2009/06/08                 ...................................................................................A... .....................................................................................  1, 1, 1, 1 NY/4057/2009/06/08                 
 355 >A/NY/3002/2009/04/25                 ...................................................................................A... .....................................................................................  1, 1, 1, 1 NY/3002/2009/04/25                 
 356 >A/NY/3235/2009/04/28                 ...................................................................................A... .....................................................................................  1, 1, 1, 1 NY/3235/2009/04/28                 
 357 >A/NY/3219/2009//                     ...................................................................................A... .....................................................................................  1, 1, 1, 1 NY/3219/2009//                     
 358 >A/Guangdong/02/2009/05/27            ...................................................................................A... .....................................................................................  1, 1, 1, 1 Guangdong/02/2009/05/27            
 359 >A/Taiwan/T0724/2009/05/19            ...................................................................................A... .....................................................................................  1, 1, 1, 1 Taiwan/T0724/2009/05/19            
 360 >A/NY/3210/2009/04/24                 ...................................................................................A... .....................................................................................  1, 1, 1, 1 NY/3210/2009/04/24                 
 361 >A/NY/3196/2009/04/28                 ...................................................................................A... .....................................................................................  1, 1, 1, 1 NY/3196/2009/04/28                 
 362 >A/NY/3741/2009/05/19                 ...................................................................................A... .....................................................................................  1, 1, 1, 1 NY/3741/2009/05/19                 
 363 >A/Quebec/147023/2009//               ...................................................................................A... .....................................................................................  1, 1, 1, 1 Quebec/147023/2009//               
 364 >A/NY/3345/2009/05/01                 ...................................................................................A... .....................................................................................  1, 1, 1, 1 NY/3345/2009/05/01                 
 365 >A/NY/3236/2009/04/28                 ...................................................................................A... .....................................................................................  1, 1, 1, 1 NY/3236/2009/04/28                 
 366 >A/NY/23/2009/04/24                   ...................................................................................A... .....................................................................................  1, 1, 1, 1 NY/23/2009/04/24                   
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 422 >A/NY/3149/2009//                     ...................................................................................A... .....................................................................................  1, 1, 1, 1 NY/3149/2009//                     
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 430 >A/NY/25/2009/04/24                   ...................................................................................A... ..............................T......................................................  2, 2, 2, 2 NY/25/2009/04/24                   
 431 >A/NY/3166/2009/04/26                 ...................................................................................A... ..............................T......................................................  2, 2, 2, 2 NY/3166/2009/04/26                 
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 433 >A/Saitama/85/2009/06/29              ...................................................................................A... .....................................................................................  2, 1, 2, 1 Saitama/85/2009/06/29              
 434 >A/Fuzhou/01/2009/05/28               ...................................................................................A... ..............................................................................A......  2, 2, 2, 2 Fuzhou/01/2009/05/28               
 435 >A/Fujian/1/2009/05/22                ...................................................................................A... ..............................................................................A......  2, 2, 2, 2 Fujian/1/2009/05/22                
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 438 >A/NY/3960/2009/05/31                 .............................................................................A.....A... .....................................................................................  2, 2, 2, 2 NY/3960/2009/05/31                 
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 443 >A/Moscow/IIV01/2009/05/21            ......A............................................................................A... .....................................................................................  2, 2, 2, 2 Moscow/IIV01/2009/05/21            
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 445 >A/NY/3613/2009/05/19                 ...................................................................................A... .................................................................................A...  2, 2, 2, 2 NY/3613/2009/05/19                 
 446 >A/NY/3740/2009/05/18                 ...................................................................................A... ........T............................................................................  2, 2, 2, 2 NY/3740/2009/05/18                 
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 448 >A/NY/3552/2009/05/20                 ...................................................................................A... ...................................................................G.................  2, 2, 2, 2 NY/3552/2009/05/20                 
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 450 >A/NY/3627/2009/05/22                 ...................................................................................A... ...................................................................G.................  2, 2, 2, 2 NY/3627/2009/05/22                 
 451 >A/Canada-ON/RV1526/2009//            ...................................................................................A... ........................................A............................................  2, 2, 2, 2 Canada-ON/RV1526/2009//            
 452 >A/Hiroshima/230/2009/06/25           ...................................................................................A... ........................................A............................................  2, 2, 2, 2 Hiroshima/230/2009/06/25           
 453 >A/Ohio/07/2009/04/24                 ...................................................................................A... ........................................A............................................  2, 2, 2, 2 Ohio/07/2009/04/24                 
 454 >A/Georgia/01/2009/04/27              ...................................................................................A... ........................................A............................................  3, 2, 3, 2 Georgia/01/2009/04/27              
 455 >A/NY/3007/2009/04/27                 ...................................................................................A... ........................................A............................................  3, 2, 3, 2 NY/3007/2009/04/27                 
 456 >A/Shanghai/71T/2009/05/31            ...................................................................................A... ........................................A............................................  3, 2, 3, 2 Shanghai/71T/2009/05/31            
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 464 >A/Brandenburg/20/2009/05/04          ...................................................................................A..- --......................................A............................................  9, 5, 3, 2 Brandenburg/20/2009/05/04          
 465 >A/Bayern/63/2009//                   ...................................................................................A.-- ........................................A............................................ 11, 4, 4, 2 Bayern/63/2009//                   
 466 >A/NY/3203/2009/04/27                 ...................................................................................A... .....................................................................................  2, 1, 2, 1 NY/3203/2009/04/27                 
 467 >A/NY/3726/2009/05/31                 ...................................................................................A... .....................................................................................  2, 1, 2, 1 NY/3726/2009/05/31                 
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 469 >A/NY/3551/2009/05/20                 ...................................................................................A... .....................................................................................  2, 1, 2, 1 NY/3551/2009/05/20                 
 470 >A/NY/3049/2009/04/27                 ...................................................................................A... .........................................................................T...........  3, 2, 2, 2 NY/3049/2009/04/27                 
 471 >A/NY/3463/2009/05/14                 ...................................................................................A... .........................................................................T...........  3, 2, 3, 2 NY/3463/2009/05/14                 
 472 >A/NY/3172/2009/04/27                 ...................................................................................A... .....................................................................................  2, 1, 2, 1 NY/3172/2009/04/27                 
 473 >A/Yamaguchi/21/2009/06/03            .....................................................................G.............A... .....................................................................................  2, 2, 2, 2 Yamaguchi/21/2009/06/03            
 474 >A/Iwate/1/2009/06/09                 .....................................................................G.............A... .....................................................................................  2, 2, 2, 2 Iwate/1/2009/06/09                 
 475 >A/Kanagawa/137/2009/06/12            .....................................................................G.............A... .....................................................................................  2, 2, 2, 2 Kanagawa/137/2009/06/12            
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 477 >A/Akita/1/2009/06/11                 .....................................................................G.............A... .....................................................................................  2, 2, 2, 2 Akita/1/2009/06/11                 
 478 >A/Yamaguchi/22/2009//                .....................................................................G.............A... .....................................................................................  2, 2, 2, 2 Yamaguchi/22/2009//                
 479 >A/Chiba-C/48/2009/06/02              .....................................................................G.............A..- .....................................................................................  3, 3, 2, 2 Chiba-C/48/2009/06/02              
 480 >A/Yokohama/1/2009/06/09              .....................................................................G.............A... .....................................................................................  2, 2, 2, 2 Yokohama/1/2009/06/09              
 481 >A/Shiga/3/2009/06/06                 .....................................................................G.............A... .....................................................................................  3, 2, 3, 2 Shiga/3/2009/06/06                 
 482 >A/Bogota/0466N/2009/06/25            ...................................................................................A... .....................................................................................  2, 1, 2, 1 Bogota/0466N/2009/06/25            
 483 >A/NY/18/2009/04/25                   ...................................................................................A... .............................................................................A.......  2, 2, 2, 2 NY/18/2009/04/25                   
 484 >A/NY/3193/2009/04/28                 ...................................................................................A... .............................................................................A.......  2, 2, 2, 2 NY/3193/2009/04/28                 
 485 >A/NY/3189/2009/04/29                 ...................................................................................A... .....................................................................................  2, 1, 2, 1 NY/3189/2009/04/29                 
 486 >A/NY/3488/2009/05/12                 ...................................................................................A... ..............T......................................................................  2, 2, 2, 2 NY/3488/2009/05/12                 
 487 >A/NY/3420/2009/05/13                 ...................................................................................A... ..............T......................................................................  2, 2, 2, 2 NY/3420/2009/05/13                 
 488 >A/Moscow/IIV02/2009/05/26            ...................................................................................A... .....................................................................................  2, 1, 2, 1 Moscow/IIV02/2009/05/26            
 489 >A/NY/3014/2009/04/27                 ...................................................................................A... .....................................................................................  2, 1, 2, 1 NY/3014/2009/04/27                 
 490 >A/Zhejiang/1/2009/05/23              ...................................................................................A... ............................................................C........................  2, 2, 2, 2 Zhejiang/1/2009/05/23              
 491 >A/NY/3187/2009/05/01                 ............................A......................................................A... .....................................................................................  2, 2, 2, 2 NY/3187/2009/05/01                 
 492 >A/NY/3223/2009//                     ............................A......................................................A... .....................................................................................  2, 2, 2, 2 NY/3223/2009//                     
 493 >A/NY/3184/2009/04/28                 ............................A......................................................A... .....................................................................................  3, 2, 3, 2 NY/3184/2009/04/28                 
 494 >A/NY/3655/2009/05/26                 .................................................................................T.A... .....................................................................................  2, 2, 2, 2 NY/3655/2009/05/26                 
 495 >A/NY/3418/2009/05/12                 .................................................................................T.A... .....................................................................................  2, 2, 2, 2 NY/3418/2009/05/12                 
 496 >A/NY/3614/2009/05/22                 ...................................................................................A... .....................................................................................  2, 1, 2, 1 NY/3614/2009/05/22                 
 497 >A/NY/3202/2009//                     ...................................................................................A... .....................................................................................  1, 1, 1, 1 NY/3202/2009//                     
 498 >A/Malaysia/820/2009/05/15            ..............A....................................................................A... .....................................................................................  2, 2, 2, 2 Malaysia/820/2009/05/15            
 499 >A/Moscow/IIV04/2009/07/09            ..............A....................................................................A... ..................................A..................................................  4, 3, 4, 3 Moscow/IIV04/2009/07/09            
 500 >A/NY/3246/2009//                     ...................................................................................A... .....................................................................................  2, 1, 2, 1 NY/3246/2009//                     
 501 >A/CA/14/2009/04/25                   ...................................................................................A..A .....................................................................................  2, 2, 2, 2 CA/14/2009/04/25                   
 502 >A/NY/06/2009/04/25                   ...................................................................................A..A .....................................................................................  2, 2, 2, 2 NY/06/2009/04/25                   
 503 >A/NY/3744/2009/05/15                 ......................A............................................................A... .....................................................................................  2, 2, 2, 2 NY/3744/2009/05/15                 
 504 >A/NY/3629/2009/05/24                 ......................A............................................................A... .....................................................................................  2, 2, 2, 2 NY/3629/2009/05/24                 
 505 >A/Taiwan/126/2009/06/                ......................A............................................................A... .....................................................................................  3, 2, 3, 2 Taiwan/126/2009/06/                
 506 >A/NY/3818/2009/06/02                 ......................A............................................................A... .....................................................................................  3, 2, 3, 2 NY/3818/2009/06/02                 
 507 >A/NY/3992/2009/06/10                 ......................A............................................................A... .....................................................................................  4, 2, 4, 2 NY/3992/2009/06/10                 
 508 >A/Toronto/C0270/2009/05/24           ........................A..........................................................A... ................................................G....................................  3, 3, 3, 3 Toronto/C0270/2009/05/24           
 509 >A/Toronto/T5294/2009/05/30           ........................A...........C..............................................A... ................................................G....................................  4, 4, 4, 4 Toronto/T5294/2009/05/30           
 510 >A/Canada-SK/RV1767/2009/05/04        ........................A..........................................................A... ................................................G....................................  4, 3, 4, 3 Canada-SK/RV1767/2009/05/04        
 511 >A/Canada-MB/RV1975/2009/05/24        ........................A..........................................................A... ...........G....................................G....................................  5, 4, 5, 4 Canada-MB/RV1975/2009/05/24        
 512 >A/Canada-MB/RV2018/2009/05/29        ........................A..........................................................A... ...........G....................................G....................................  5, 4, 5, 4 Canada-MB/RV2018/2009/05/29        
 513 >A/Toronto/T5308/2009/06/03           ........................A...........C..............................................A... ................T...............................G....................................  6, 5, 6, 5 Toronto/T5308/2009/06/03           
 514 >A/NY/4074/2009/06/10                 ...................................................................................A... .....................................................................................  3, 1, 3, 1 NY/4074/2009/06/10                 
 515 >A/Malaysia/854/2009/05/16            ...................................................................................A... .....................................................................................  3, 1, 3, 1 Malaysia/854/2009/05/16            
 516 >A/NY/3205/2009/04/26                 ...................................................................................A... .....................................................................................  3, 1, 3, 1 NY/3205/2009/04/26                 
 517 >A/Paris/2670/2009/05/22              ...................................................................................A... .....................................................................................  3, 1, 3, 1 Paris/2670/2009/05/22              
 518 >A/Chiba-C/51/2009/06/18              ...................................................................................A... .....................................................................................  3, 1, 3, 1 Chiba-C/51/2009/06/18              
 519 >A/Yamaguchi/23/2009/06/22            ...................................................................................A... .....................................................................................  3, 1, 3, 1 Yamaguchi/23/2009/06/22            
 520 >A/NY/3195/2009/04/28                 .................................................................A.................A... ......................................A..............................................  3, 3, 3, 3 NY/3195/2009/04/28                 
 521 >A/NY/3199/2009/04/28                 .................................................................A.................A... ......................................A..............................................  3, 3, 3, 3 NY/3199/2009/04/28                 
 522 >A/NY/3898/2009/06/05                 ...................................................................................A... .....................................................................................  3, 1, 3, 1 NY/3898/2009/06/05                 
 523 >A/NY/3625/2009/05/26                 ...................................................................................A... .....................................................................................  3, 1, 3, 1 NY/3625/2009/05/26                 
 524 >A/Taiwan/T1339/2009/05/22            ...C...............................................................................A... .....................................................................................  3, 2, 3, 2 Taiwan/T1339/2009/05/22            
 525 >A/Taiwan/T1821/2009/05/30            ...C...............................................................................A... .....................................................................................  3, 2, 3, 2 Taiwan/T1821/2009/05/30            
 526 >A/Toronto/R8557/2009/07/03           .............A.....................................................................A... .....................................................................................  3, 2, 3, 2 Toronto/R8557/2009/07/03           
 527 >A/NY/3265/2009/04/29                 ...................................................................................A... ......................................................................G..............  3, 2, 3, 2 NY/3265/2009/04/29                 
 528 >A/NY/3612/2009/05/18                 ...................................................................................A... .....................................................................................  3, 1, 3, 1 NY/3612/2009/05/18                 
 529 >A/NY/3651/2009/05/25                 ...................................................................................A... .....................................................................................  3, 1, 3, 1 NY/3651/2009/05/25                 
 530 >A/NY/3715/2009/05/29                 ...................................................................................A... .....................................................................................  3, 1, 3, 1 NY/3715/2009/05/29                 
 531 >A/Iwate/3/2009/06/24                 ...................................................................................A... .................................C................................C..................  3, 3, 3, 3 Iwate/3/2009/06/24                 
 532 >A/Iwate/2/2009/06/18                 ...................................................................................A... .................................C................................C..................  3, 3, 3, 3 Iwate/2/2009/06/18                 
 533 >A/Aichi/198/2009/06/15               ...................................................................................A... .................................C................................C..................  4, 3, 4, 3 Aichi/198/2009/06/15               
 534 >A/Tokushima/2/2009/07/18             ...................................................................................A... .............A....................................................C..................  3, 3, 3, 3 Tokushima/2/2009/07/18             
 535 >A/NY/11/2009/04/25                   ...................................................................................A... .....................................................................................  3, 1, 3, 1 NY/11/2009/04/25                   
 536 >A/Canada-AB/RV1532/2009//            ...................................................................................A... .....................................................................................  3, 1, 3, 1 Canada-AB/RV1532/2009//            
 537 >A/Nebraska/03/2009/04/27             ...................................................................................A... .....................................................................................  2, 1, 2, 1 Nebraska/03/2009/04/27             
 538 >A/Fukushima/1/2009/06/23             ...................................................................................A... .....................................................................................  3, 1, 3, 1 Fukushima/1/2009/06/23             
 539 >A/NY/3190/2009/04/29                 ................T..................................................................A... .....................................................C...............................  3, 3, 3, 3 NY/3190/2009/04/29                 
 540 >A/Taiwan/137/2009/06/                .................................................T..........A......................A... .....................................................................................  3, 3, 3, 3 Taiwan/137/2009/06/                
 541 >A/THA/CU-H106/2009/07/               -................................................T..........A......................A... ................T........A.....................................................T.....  9, 7, 6, 6 THA/CU-H106/2009/07/               
 542 >A/THA/CU-B938/2009/08/               .....G...........G.................................................................A..- ................T........A.....................................................T.....  7, 7, 6, 6 THA/CU-B938/2009/08/               
 543 >A/THA/CU-H340/2009/08/               ...................................................................................R..- .....................G...A.....................................................T.....  8, 5, 4, 4 THA/CU-H340/2009/08/               
 544 >A/NY/3532/2009/05/16                 ...................................................................................A... .....................................................................................  3, 1, 3, 1 NY/3532/2009/05/16                 
 545 >A/Massachusetts/06/2009/04/26        ...................................................................C...............A... .....................................................................................  4, 2, 4, 2 Massachusetts/06/2009/04/26        
 546 >A/Taiwan/T1338/2009/05/22            ...................................................................................A... .....................................................................................  4, 1, 4, 1 Taiwan/T1338/2009/05/22            
 547 >A/NY/3812/2009/05/31                 .........G.........................................................................A... .....................................................................................  4, 2, 4, 2 NY/3812/2009/05/31                 
 548 >A/Quebec/144147/2009//               ...................................................................................A... ............A........................................................................  4, 2, 4, 2 Quebec/144147/2009//               
 549 >A/Canada-QC/RV1759/2009/05/07        ...................................................................................A... .....................................................................................  4, 1, 4, 1 Canada-QC/RV1759/2009/05/07        
 550 >A/NY/3566/2009/05/20                 ..............................A....................................................A... .....................................................................................  4, 2, 4, 2 NY/3566/2009/05/20                 
 551 >A/Denmark/524/2009/06/04             .....T.............................................................................A... ...........................G......................................................C..  7, 4, 4, 4 Denmark/524/2009/06/04             
 552 >A/Denmark/528/2009/06/09             .....T.............................................................................A... ...........................G......................................................C..  4, 4, 4, 4 Denmark/528/2009/06/09             
 553 >A/Denmark/523/2009/06/04             .....T..............A..............................................................A... ...........................G......................................................C..  5, 5, 5, 5 Denmark/523/2009/06/04             
 554 >A/NY/3580/2009/05/19                 ...................................................................................A... .....................................................................................  4, 1, 4, 1 NY/3580/2009/05/19                 
 555 >A/Rhode Island/08/2009//             ...................................................................................A... .....................................................................................  4, 1, 4, 1 Rhode Island/08/2009//             
 556 >A/Myanmar/JP90/2009/07/08            ...................................................................................A... ..............T......................................................................  4, 2, 4, 2 Myanmar/JP90/2009/07/08            
 557 >A/Gifu-C/67/2009/07/07               ..........................................A........................................A... ..............T..........A...........................................................  6, 4, 6, 4 Gifu-C/67/2009/07/07               
 558 >A/Toronto/T0106/2009/07/07           ...................................................................................A... ....A...........................................................G....................  4, 3, 4, 3 Toronto/T0106/2009/07/07           
 559 >A/Italy/49/2009/05/27                ............................A......................................................A... .....................................................................................  4, 2, 4, 2 Italy/49/2009/05/27                
 560 >A/Luxembourg/43/2009/06/01           .......................G....A......................................................A... .....................................................................................  5, 3, 5, 3 Luxembourg/43/2009/06/01           
 561 >A/NY/4290/2009/06/19                 ............................A......................................................A... .....................................................................................  5, 2, 5, 2 NY/4290/2009/06/19                 
 562 >A/Zhejiang-Yiwu/11/2009/09/06        ............A..............................................A.......................A... .............................A......................................C................  5, 5, 5, 5 Zhejiang-Yiwu/11/2009/09/06        
 563 >A/Zhejiang/DTID-ZJU02/2009/09/07     ............A...........A..................................A.......................A... .............................A......................................C................  8, 6, 8, 6 Zhejiang/DTID-ZJU02/2009/09/07     
 564 >A/Utah/11/2009/06/14                 ...................A.........C.....................................................A... ............................................T...........G............................  5, 5, 5, 5 Utah/11/2009/06/14                 
 565 >A/Niigata/749/2009/07/07             ...................A.........C.....................................................A... .......................T....................T...........G............................  6, 6, 6, 6 Niigata/749/2009/07/07             
 566 >A/Utah/05/2009/06/14                 ...................A.........C....................................A................A... ............................................T...........G............................  7, 6, 7, 6 Utah/05/2009/06/14                 
 567 >A/NY/4006/2009/06/10                 ...................................................................................A... .....................................................................................  5, 1, 5, 1 NY/4006/2009/06/10                 
 568 >A/Hiroshima/207/2009/07/01           ....A............G....................................................T............A... .....................................................................................  5, 4, 5, 4 Hiroshima/207/2009/07/01           
 569 >A/Hiroshima/220/2009/07/03           ....A............G....................................................T............A... .....................................................................................  7, 4, 7, 4 Hiroshima/220/2009/07/03           
 570 >A/Bayern/66/2009//                   ....A............G.................................................................A... .....................................................................................  5, 3, 5, 3 Bayern/66/2009//                   
 571 >A/Aichi/202/2009/06/16               ....A............GT................................................................A... ......T........................................A.....................................  6, 6, 6, 6 Aichi/202/2009/06/16               
 572 >A/Mie/52/2009/07/21                  ....A............GT............................................G...................A... ......T........................................A.....................................  9, 7, 9, 7 Mie/52/2009/07/21                  
 573 >A/Tk/Chile/28317-6504-3/2009/08/17   ...................................................T...............................A... ....................A.........................................C......................  5, 4, 5, 4 Tk/Chile/28317-6504-3/2009/08/17   
 574 >A/Niigata/717/2009/06/23             ......................................................................T............A... ............A.......A...................A............................................  7, 5, 7, 5 Niigata/717/2009/06/23             
 575 >A/NY/3895/2009/06/03                 ..............................................................A....................A... ........................................A............................................  6, 3, 6, 3 NY/3895/2009/06/03                 
 576 >A/Hiroshima/216/2009/06/30           ..........................................................................C.G......A... .....................................................................................  5, 3, 5, 3 Hiroshima/216/2009/06/30           
 577 >A/Myanmar/60/2009/06/26              .................................A........................................C.G......A... .....................................................................................  5, 4, 5, 4 Myanmar/60/2009/06/26              
 578 >A/Myanmar/JP101/2009/07/14           .................................A........................................C.G......A... .....................................................................................  5, 4, 5, 4 Myanmar/JP101/2009/07/14           
 579 >A/Taiwan/526/2009/07/                ..........................................................................C.G......A... ............................................................C........................  5, 4, 5, 4 Taiwan/526/2009/07/                
 580 >A/NY/4100/2009/06/13                 ......................................A............................................A... .T...................................................................................  5, 3, 5, 3 NY/4100/2009/06/13                 
 581 >A/Hiroshima/201/2009/06/17           ..............................................................................A...TA... .....................................................................................  6, 3, 6, 3 Hiroshima/201/2009/06/17           
 582 >A/Sapporo/1/2009/06/11               ...............A...................................................................A... .....................................................................................  6, 2, 6, 2 Sapporo/1/2009/06/11               
 583 >A/Moscow/IIV05/2009/06/20            ...................................................................................A... .....................................................................................  6, 1, 6, 1 Moscow/IIV05/2009/06/20            
 584 >A/THA/CU-H276/2009/07/               .................R..............................R..................................A... ................T........A...........................................................  8, 5, 6, 5 THA/CU-H276/2009/07/               
 585 >A/Mie/41/2009/07/11                  ...................................................................................A... .....................................................................................  7, 1, 7, 1 Mie/41/2009/07/11                  
 586 >A/Israel/276/2009/04/                ................................................................G..................A... ..AGA.....G..........................G...............................................  9, 7, 9, 7 Israel/276/2009/04/                
 587 >A/Zhejiang/2/2009/05/31              .................G.................................................................A... .......G................................A............................................ 10, 4,10, 4 Zhejiang/2/2009/05/31              
 588 >A/Cancun-NY/Index/2009/04/15         ...................................................................................A... .....................................................................................  1, 1, 1, 1 Cancun-NY/Index/2009/04/15         
                                                                                                                                                                                                                               
---Index-----------------------------------CCTGGAGGAAACGGGGCACCGGGTGCGACTGAGGCGTTGAAGGAAGAAACGCCATACAAGGAGAAGGGTACCTTTGAGGAGGCGTTG CCGAGACAACAAGGCTCACCGAACGGGAGGCGCTGAAAGTGTGTCCAGAAGTATTGAAAATGTCACTATTATACCTTGGCAGTGA       
-codon-position----------------------------1  2     2 2 1 21  12  1 11 1  111   21112 1 1       1  2111111 21  1      121 212  12  11    1           22  1 1           12 1      1 2   121  1    21     21 2  2 2    2 1       
                                           000000000000000000000000000000000000011111111111111111111111111111111111111111222222222 0000000000000000000000000000000000000111111111111111111111111111111111111112222222222       
                                           000111222222223334444445555556777889900001111222223333334444455556667777888999000001122 0011111222333344444444555666677788999001112233344445666666777777788888999990000001122       
                                           247127012477880274566783445583129785713560799001890135571133825673681278579479133576968 1255679589045845666788447034908927567585685703613661004899024566711259015690134792800       
                                           822037702538263091004105670209479481530103324798168481372728382979501805429599008403770 9869210287054170257069191365659556793890151582399142348026183805358475918250630644923

gsgs · Aug 18, 2010

Re: swine flu sequences (thread from h5n1experts)

---------------posted:2009/11/15---------------

******-mutations at the receptor binding domain (RBD) in HA

Code:

                                     111111111111112222222222222222222222222222
                                     004455556667990000000000113333333333444444
                                     898901237890890123456789010123456789012345
                                     Y GVTAA WLV HPSTSADQQSLYQ EIAIRPKVRDQEGRM 
                                     ------------------------------------------
>A/Lishui/01/2009/07                 - ..... ... ............. ..........R.... 
>A/Ekaterinburg/01/2009/             . ..... ... ............. ..........R.... 
>A/Omsk/01/2009/                     . ..... ... ............. ..........R.... 
>A/Finland/553/2009/05/10            . ..... ... ............. ..........R.... 
>A/Irkutsk/02/2009/                  . ..... ... ............. ..........R.... 
>A/Mexico/InDRE4487/2009/04/14       . ..... ... ............. ..........R.... 
>A/Mexico/4603/2009/04/19            . ..... ... ............. ..........R.... 
>A/Texas/17/2009/04/24               . ..... ... ............. ..........R.... 
>A/Zhejiang/DTID-ZJU01/2009/06       . ..... ... ............. ..........R.... 
>A/Singapore/TLL51/2009/06/14        . ..... ... ............. ..........R.... 
>A/Singapore/TLL10/2009/07/27        . ..... ... ............. ..........R.... 
>A/New York/05/2009/04               . ..... ... ............. ..........X.... 
>A/New York/25/2009/04/24            . ..... ... ............. ..........X.... 
>A/New York/08/2009/04/25            . ..... ... ............. ..........X.... 
>A/New York/13/2009/04/25            . ..... ... ............. ..........X.... 
>A/New York/34/2009/04/25            . ..... ... ............. ..........X.... 
>A/New York/33/2009/04/25            . ..... ... ............. ..........X.... 
>A/New York/18/2009/04/25            . ..... ... ............. ..........X.... 
>A/Delaware/05/2009/04/28            . ..... ... ............. ..........X.... 
>A/Texas/08/2009/04/24               . ..... ... ............. ..........X.... 
>A/Texas/20/2009/04/25               . ..... ... ............. ..........X.... 
>A/Mexico/4108/2009/04/02            . ..... ... ............. ..........X.... 
>A/California/12/2009/04/22          . ..... ... ............. ..........X.... 
>A/Singapore/ON903/2009/07/04        . ..... ... ............. ..........X.... 


>A/Arizona/04/2009/04/27             . ..... ... ............. .........B..... 
>A/South Carolina/09/2009/04/26      . ..... ... ............. .........B..... 

>A/Italy/172/2009/                   - ..... ... ............. .........E..... 
>A/Catalonia/387/2009/06/26          . ..... ... ............. .........E..... 
>A/Athens/893/2009/06/09             . ..... ... ............. .........E..... 
>A/Catalonia/S1120/2009/07/20        . ..... ... ............. .........E..... 
>A/Catalonia/S1165/2009/07/30        . ..... ... ............. .........E..... 
>A/Catalonia/S1209/2009/08/05        . ..... ... ............. .........E..... 
>A/Catalonia/S1205/2009/08/05        . ..... ... ............. .........E..... 
>A/Catalonia/S1199/2009/08/06        . ..... ... ............. .........E..... 
>A/Catalonia/S1222/2009/08/10        . ..... ... ............. .........E..... 
>A/Catalonia/S1227/2009/08/10        . ..... ... ............. .........E..... 
>A/Catalonia/S1215/2009/08/12        . ..... ... ............. .........E..... 
>A/Catalonia/S1249/2009/08/18        . ..... ... ............. .........E..... 
>A/Catalonia/S1260/2009/08/19        . ..... ... ............. .........E..... 
>A/Catalonia/S1265/2009/08/24        . ..... ... ............. .........E..... 
>A/Catalonia/S1269/2009/08/24        . ..... ... ............. .........E..... 
>A/Catalonia/S1272/2009/08/25        . ..... ... ............. .........E..... 
>A/Catalonia/S1273/2009/08/25        . ..... ... ............. .........E..... 
>A/Catalonia/S1300/2009/08/28        . ..... ... ............. .........E..... 
>A/Catalonia/S1304/2009/08/28        . ..... ... ............. .........E..... 
>A/Catalonia/S1333/2009/09/01        . ..... ... ............. .........E..... 
>A/Catalonia/S1331/2009/09/03        . ..... ... ............. .........E..... 
>A/Catalonia/S1350/2009/09/09        . ..... ... ............. .........E..... 
>A/Catalonia/S1379/2009/09/16        . ..... ... ............. .........E..... 
>A/Catalonia/S1453/2009/09/30        . ..... ... ............. .........E..... 
>A/Catalonia/S1490/2009/10/07        . ..... ... ............. .........E..... 
>A/Catalonia/S1545/2009/10/19        . ..... ... ............. .........E..... 
>A/Catalonia/S1592/2009/10/21        . ..... ... ............. .........E..... 
>A/Catalonia/S1606/2009/10/26        . ..... ... ............. .........E..... 
>A/Catalonia/S1637/2009/10/28        . ..... ... ............. .........E..... 
>A/Catalonia/S1641/2009/10/28        . ..... ... ............. .........E..... 
>A/Catalonia/378/2009/06/23          . ..... ... ............. .........E..... 
>A/Milan/83/2009/07/15               . ..... ... ............. .........E..... 
>A/Milan/80/2009/07/08               . ..... ... ............. .........E..... 
>A/Catalonia/S1183/2009/07/28        . ..... ... ............. .........E..... 
>A/Catalonia/S1182/2009/07/29        . ..... ... ............. .........E..... 
>A/Catalonia/S1254/2009/08/19        . ..... ... ............. .........E..... 
>A/Catalonia/S1286/2009/08/25        . ..... ... ............. .........E..... 
>A/Catalonia/S1237/2009/08/13        . ..... ... ............. .........E..... 
>A/Catalonia/S1248/2009/08/18        . ..... ... ............. .........E..... 
>A/Catalonia/S1479/2009/10/05        . ..... ... ............. .........E..... 
>A/Catalonia/S1605/2009/10/26        . ..... ... ............. .........E..... 
>A/Catalonia/S1236/2009/08/13        . ..... ... ............. .........E..... 
>A/Catalonia/S1478/2009/10/05        . ..... ... ............. .........E..... 
>A/Catalonia/S1587/2009/10/22        . ..... ... ............. .........E..... 
>A/Catalonia/S1436/2009/09/28        . ..... ... ............. .........E..... 
>A/Almati/01/2009/                   . ..... ... ............. .........E..... 
>A/New Jersey/01/2009/04             . ..... ... ............. .........E..... 
>A/Sapporo/1/2009/06/11              . ..... ... ............. .........E..... 
>A/Paris/2591/2009/05/01             . ..... ... ............. .........E..... 
>A/Hong Kong/2369/2009/06/11         . ..... ... ............. .........E..... 
>A/California/25/2009/06/15          . ..... ... ............. .........E..... 
>A/Nagasaki/HA-44/2009/08/20         . ..... ... ............. .........E..... 
>A/Changsha/78/2009/06/29            . ..... ... ............. .........E..... 
>A/Ancona/05/2009/07/12              . ..... ... ............. .........E..... 
>A/Catalonia/S1632/2009/10/28        . ..... ... ............. .........E..... 
>A/Catalonia/S1161/2009/07/28        . ..... ... ............. .........E..... 
>A/Catalonia/S1604/2009/10/26        . ..... ... ............. .........E..... 

>A/Catalonia/NS2001/2009/08/03       - ----- ... ............. .........G..... 
>A/Catalonia/NS1706/2009/07/29       . ..... ... ............. .........G..... 
>A/Catalonia/NS2008/2009/08/03       . ..... ... ............. .........G..... 
>A/Texas/05/2009/04/15               . ..... ... ............. .........G..... 
>A/Texas/11/2009/04/23               . ..... ... ............. .........G..... 
>A/Mexico/InDRE4114/2009/            . ..... ... ............. .........G..... 
>A/Mexico/InDRE4114/2009/            . ..... ... ............. .........G..... 
>A/New York/04/2009/04               . ..... ... ............. .........G..... 
>A/Sao Paulo/53206/2009/07/19        . ..... ... ............. .........G..... 
>A/Sao Paulo/53225/2009/08/01        . ..... ... ............. .........G..... 
>A/Georgia/01/2009/04/27             . ..... ... ............. .........G..... 
>A/Zhejiang-Yiwu/11/2009/09/06       . ..... ... ............. .........G..... 
>A/Zhejiang/DTID-ZJU02/2009/09/07    . ..... ... ............. .........G..... 
>A/Zhejiang/DTID-ZJU03/2009/09/07    . ..... ... ............. .........G..... 
>A/Mexico/3955/2009/04/02            . ..... ... ............. .........G..... 

>A/New York/4099/2009/06/13          . ..... ... ............. .........N..... 
>A/New York/4576/2009/07/08          . ..... ... ............. .........N..... 
>A/Sao Paulo/53845/2009/08/02        . ..... ... ............. .........N..... 
>A/Sao Paulo/53838/2009/08/01        . ..... ... ............. .........N..... 

>A/Nebraska/02/2009/04               . ..... ... ............. .........X..... 
>A/California/13/2009/04/21          . ..... ... ............. .........X..... 
>A/Texas/10/2009/04/23               . ..... ... ............. .........X..... 
>A/New York/31/2009/04/24            . ..... ... ............. .........X..... 
>A/Texas/04/2009/04/14               . ..... ... ............. .........XX.... 
>A/California/07/2009/04/09          . ..... ... ............. .........XX.... 
>A/Singapore/GP2312/2009/07/31       . ..... ... ............. .........XXXX.. 

>A/Singapore/ON141/2009/06/02        . ..... ... ............. ........G...... 
>A/Singapore/ON1118/2009/07/09       . ..... ... ............. ........X...... 
>A/Singapore/GP2695/2009/08/06       . ..... ... ............. ........X...... 
>A/Singapore/GP2687/2009/08/06       . ..... ... ............. ........X....X. 
>A/Singapore/ON2081/2009/09/13       . ..... ... ............. ........X..XXX. 
>A/Singapore/ON1187/2009/07/15       . ..... ... ............. ........XX.X.X. 
>A/Singapore/GP2641/2009/08/05       . ..... ... ............. .......XXX.XX.. 
>A/Singapore/GP2651/2009/08/05       . ..... ... ............. .......XXX.XX.. 
>A/Sto Domingo/WR1057N/2009/07/02    . ..... ... ............. ..T............ 
>A/Hiroshima/201/2009/06/17          . ..... ... ............. ..T......G..... 
>A/Pennsylvania/14/2009/             . ..... ... ............. ..X............ 
>A/Auckland/1/2009/04/25             . ..... ... ..........I.. ............... 
>A/California/04/2009/06/05          . ..... ... ..........I.. ............... 
>A/Singapore/TLL38/2009/08/06        . ..... ... ..........I.. ............... 
>A/Singapore/TLL40/2009/08/08        . ..... ... ..........I.. ............... 
>A/Singapore/TLL42/2009/08/08        . ..... ... ..........I.. ............... 
>A/New York/35/2009/04/25            . ..... ... ..........J.. ............... 
>A/South Carolina/10/2009/04/26      . ..... ... ..........J.. ............... 
>A/Hiroshima/230/2009/06/25          . ..... ... ..........J.. ............... 
>A/New York/11/2009/04/25            . ..... ... ..........J.. .........X..... 
>A/Catalonia/S1384/2009/09/17        . ..... ... .........G... ............... 
>A/Chengdu/18/2009/07/26             . ..... ... .......R..... ............... 
>A/Singapore/ON1138/2009/07/13       . ..... ... ......G...... ............... 
>A/Sao Paulo/53823/2009/08/01        . ..... ... ....I........ ............... 
>A/New York/3502/2009/05/16          . ..... ... ....N........ ............... 
>A/Utsunomiya/2/2009/06/16           . ..... ... ....N........ ............... 
>A/Utsunomiya/1/2009/06/16           . ..... ... ....N........ ............... 
>A/Niigata/700/2009/06/22            . ..... ... ....N........ ............... 
>A/Catalonia/S1369/2009/09/15        . ..... ... ....N........ .........E..... 
>A/Catalonia/S1187/2009/07/30        . ..... ... ....N........ .........E..... 
>A/swine/Singapore-Q/M168/2009/      . ..... ... ...N......... ............... 
>A/New York/28/2009/04               . ..... ... ...X......... ............... 
>A/Kansas/03/2009/04/24              . ..... ... ..X.......... ............... 
>A/New York/17/2009/04               . ..... ... ..X.......... ............... 
>A/New York/27/2009/04               . ..... ... ..X.......... ............... 
>A/New York/18/2009/                 . ..... ... ..X.......... ..........X.... 
>A/Singapore/ON313/2009/06/19        . ..... ... X.....X...... ............... 
>A/Colombia/08/2009/04/25            . ..... ... XXXXXXXXXXXXX ............... 
>A/Osaka/180/2009/                   . ..... ..I ............. ............... 
>A/Osaka/1/2009/05/16                . ..... ..I ............. ............... 
>A/Singapore/ON1163/2009/07/14       . ..... ..I ............. ............... 
>A/Michigan/06/2009/                 . ...T. ... ............. ............... 
>A/Wisconsin/629-D01445/2009/05/24   . ...T. ... ............. ............... 
>A/Italy/128/2009/06/20              . ...T. ... ............. ............... 
>A/Toronto/T0106/2009/07/07          . ...T. ... ............. ............... 
>A/Shanghai/60T/2009/05/28           . ...T. ... ............. ............... 
>A/Ancona/04/2009/07/01              . ...T. ... ............. ...T........... 
>A/Catalonia/S1169/2009/07/28        . ...T. ... ............. ...T........... 
>A/New York/12/2009/04/25            . ...V. ... ............. ............... 
>A/New York/12/2009/04/25            . ...X. ... ............. ............... 
>A/Wisconsin/629-D02064/2009/05/22   . .A... ... ............. ............... 
>A/Indiana/09/2009/04/22             . .I... ... ............. ............... 
>A/Michigan/04/2009/04/24            . .I... ... ............. ............... 
>A/Michigan/05/2009/05/05            . .I... ... ............. ............... 
>A/New York/3573/2009/05/21          . .I... ... ............. ............... 
>A/New York/3576/2009/05/21          . .I... ... ............. ............... 
>A/New York/3654/2009/05/26          . .I... ... ............. ............... 
>A/Tokushima/1/2009/06/02            . .I... ... ............. ............... 
>A/New York/4014/2009/06/10          . .I... ... ............. ............... 
>A/Singapore/GP2316/2009/07/31       . X.... .X. ..........X.. .X..........XX. 
>A/Sw/Alberta/OTH-33-24/2009/05/03   . ..... ... ............H .......M....... 
>A/Sw/Alberta/OTH-33-21/2009/05/05   . ..... ... ............. .......M....... 
>A/Sw/Alberta/OTH-33-3/2009/05/03    . ..... ... ............. .........V..... 
                                     ------------------------------------------
                                     Y GVTAA WLV HPSTSADQQSLYQ EIAIRPKVRDQEGRM 
                                     111111111111112222222222222222222222222222
                                     004455556667990000000000113333333333444444
                                     898901237890890123456789010123456789012345

Code:

receptor binding domain of influenza-A viruses  (Nov. 2006)

positions 98,134-138,153-155,184-196,216-230 in hemagglutinin
(H3-numbering)


count,species-serotype,amino-acids at these positions,representative sequence
-----------------------------------------------------------------------------------------------------
                 Y GVTAA WIT HPPTTSEQQSLYQ EIAARPKVRGQAGRM
   9 A-H1N1:     Y GVTAA WIT HPPTTSEQQSLYQ EIAARPKVRGQAGRM     A/turkey/Minnesota/1661/81(H1N1)
   4 A-H1N1:     . ..... ... .....N....... ...............    A/pintail duck/Alberta/210/2002(H1N1)

                .....S.S..L.....NIGD.RA..H....K.....D.E..I
 325 H-H1N1:     Y GVSAS WLT HPPNIGDQRALYH EIAKRPKVRDQEGRI     A/Wyoming/4/2003(H1N1)
  64 H-H1N1:     . ..T.. ... ..S.......I.. ...............    A/Switzerland/5389/95 (H1N1)
  44 H-H1N1:     . ..... ... ......N...... ...............    A/Yokohama/62/2002(H1N1)
  35 H-H1N2:     . ..... ... .........T... ..T............    A/Scotland/15/02(H1N2)
  26 H-H1N1:     . ..T.. ... ..S..E..KTI.R .........N.....    A/Ohio/201/1983(H1N1)
  22 H-H1N1:     . ..... ... ........K.... ...............    A/New York/4/2006(H1N1)
  17 H-H1N1:     . ..T.. ... ..S..E..KTI.R ...E.....G.A...    A/USSR/92/77(H1N1)
  16 H-H1N1:     . ..T.. ... ..S.......I.. .........G.....    A/Taiwan/01/1986(H1N1)
  13 H-H1N1:     . ..T.. ... ..S.M.....I.. ...............    A/Yokohama/24/2000(H1N1)
  12 H-H1N2:     . ..... ... ......N..T... ..T............    A/Switzerland/3100/2002(H1N2)
   8 H-H1N1:     . ..T.. ... ..S.......I.. ..T............    A/New York/694/1995(H1N1)
   8 H-H1N2:     . ..... ... ......N..T..N ...............    A/Wisconsin/12/2001(H1N2)
   7 H-H1N1:     . ..... ... ..S...V...I.. .........G.....    A/Nanchang/9/1996(H1N1)
   7 H-H1N1:     . ..T.. ... ..S..R....I.. ...............    A/Suita/1/89/(R)(H1N1)
   7 H-H1N1:     . ..T.. ... ..S.M.....I.. ...R...........    A/South Australia/64/2000(H1N1)
   7 H-H1N2:     . ..... ... .........T..N ...............    A/Yokohama/47/2002(H1N2)
   5 H-H1N1:     . ..... ... ......B...... ...............    A/Wellington/18/2000(H1N1)
   5 H-H1N1:     . ..... ... ..S.......I.. ...............    A/Singapore/15/96(H1N1)
   5 H-H1N1:     . ..T.. ... ..S..E..KTI.R ...............    A/Memphis/7/1980(H1N1)
   4 H-H1N1:     - ..... ... ............. ...............    A/Shiraz/22/2005(H1N1)
   4 H-H1N1:     . ..... ... ............. .........N.....    A/South Canterbury/35/2000(H1N1)
   4 H-H1N1:     . ..... ... ..S...V...I.. ...............    A/Nanchang/17/1996(H1N1)
   4 H-H1N1:     . ..T.A ... ....SKE.QN..Q ...E.......A..M    A/Puerto Rico/8/34(H1N1)
   4 H-H1N1:     . ..T.A ... ..S.SK..QNI.Q ...E.......A..M    A/PR/8/34(HON1)
   4 H-H1N1:     . ..T.. ... ..S..E..KTI.R .........G.....    A/Fiji/15899/83)]

                ....AT.A..IV....TSN..QS..Q....A.....G.A..M
  11 S-H1N1:     Y GATAA WIV HPPTSNDQQSLYQ EIAARPKVRGQAGRM     A/swine/Nederweert/13O/96(H1N1)
  11 S-H1N1:     . .V... .L. .....T....... ...............    A/swine/Wisconsin/1/61(H1N1)
  10 S-H1N1:     . ..... ... ....N........ ...............    A/Swine/Netherlands/477/93(H1N1)
   6 S-H1N1:     . .V... .L. .....T....... ...T...........    A/Swine/Indiana/1726/1988(H1N1)
   6 S-H1N2:     . .V... .L. ..S..A....... ...T.....D.....    A/Swine/Ohio/891/01(H1N2)
   5 S-H1N1:     . .V... .L. .....T....... ...S...........    A/Swine/Wisconsin/457/98(H1N1)
   4 S-H1N1:     . ..... ... .....S....... ...........T...    A/swine/Best/5R/96(H1N1)
   4 S-H1N1:     . .I... ... ....TS....... ........K......    A/Swine/Netherlands/12/85(H1N1)
   4 S-H1N1:     . .T.S. ... ....N........ ...............    A/swine/Someren/14M/96(H1N1)
   4 S-H1N2:     - .V... .L. .....A....... ...T.....D.....    A/SW/OH/7802/00(H1N2)

                ....GSR...LT...NDDTE.RT.......T....N..G...
  11 A-H2N3:     Y GGSRA WLT HPNDDTEQRTLYQ EIATRPKVNGQGGRM     A/Pintail duck/Alberta/293/77 (H2N3)
   6 A-H2N2:     . ..... ... ....E........ ...............    A/mallard/Potsdam/178-4/83 (H2N2)
   6 A-H2N5:     - ----- ... ....E....A... ......E....R...    A/tern/Australia/91/2004(H2N5)
   5 A-H2N3:     . ..... ... .....A....... ...............    A/Silky chicken/PA/9600897/96 (H2N3)
   4 A-H2N2:     . ..... ... .....A....... ...............    A/guinea/NJ/3070/91 (H2N2)
   4 A-H2N9:     . ..... ... ............. ...............    A/teal/Alberta/16/97(H2N9)

                ......K..........EA...A.......A......L.S..
   5 H-H2N2:     Y GGSKA WLT HPNDEAEQRALYQ EIAARPKVNGLGSRM     A/Taiwan/1/67(H2N2)
   4 H-H2N2:     . ...M. ... ............. ...............    A/Taiwan/1964(H2N2)
   4 H-H2N2:     . ...R. ... .....T...T... ...T........G..    A/Japan/305/1957(H2N2)
   4 H-H2N2:     . ...R. ... .....T...T... ...T...........    A/Victoria/15681/59 (H2N2)
   4 H-H2N2:     . ...R. ... .....T...T... ...T......Q.G..    A/Leningrad/134/57 (H2N2)

                ......N........STNQ..TN..V.N.GS..W.R.QSG.I
  13 A-H3N8:     Y GGSNA WLT HPSTNQEQTNLYV NIGSRPWVRGQSGRI     A/pintail duck/ALB/169/1980(H3N8)
   6 A-H3N2:     . ..... ... ............. ...............    A/pintail duck/ALB/86/1976(H3N2)
   5 A-H3N2:     . ...G. ... .........T... ......L........    A/duck/Korea/S9/03(H3N2)
   4 A-H3N8:     . ...S. ... ............. ...............    A/mallard/Alberta/127/00(H3N8)

                ....R.G.........S.....K..I.......L........
   3 C-H3N8:     Y GRSGA WLT HPSSNQEQTKLYI NIGSRPLVRGQSGRI     A/canine/Texas/1/2004(H3N8)

                .................................W........
  16 E-H3N8:     Y GRSGA WLT HPSSNQEQTKLYI NIGSRPWVRGQSGRI     A/equine/Wisconsin/1/03(H3N8)
  15 E-H3N8:     . ..... ... .....K....... ...............    A/equine/Suffolk/89(H3N8)
   8 E-H3N8:     . ..... ... .....N....... ...............    A/Equine/LaPlata/1/93(H3N8)
   8 E-H3N8:     . ..... ... ......Q..E... ...............    A/equine/Oklahoma/2000(H3N8)

                ....T.S........GTDSD.IS..A.......R..DV.S..
 347 H-H3N2:     Y GTSSA WLT HPGTDSDQISLYA NIGSRPRVRDVSSRI     A/Western Australia/50/2003(H3N2)
 300 H-H3N2:     . ..... ..H ..S.......... ......W..G.....    A/Western Australia/9/2000(H3N2)
 223 H-H3N2:     . ..... ... .....N....... ..........IP...    A/Zhejiang/546/04(H3N2)
 197 H-H3N2:     . ..... ..H ............. ......W..G.....    A/Western Australia/36/2002(H3N2)
 122 H-H3N2:     . ...Y. ..H ..S.....T.... ......W..G.....    A/Wellington/3/97(H3N2)
 116 H-H3N2:     . ...Y. ..H ..S.....T...V ......W..G.....    A/Yokohama/68/96(H3N2)
 108 H-H3N2:     . .K.Y. ..H ..S.....T...V ......W..GI....    A/West_Virginia/1/95(H3N2)
  81 H-H3N2:     . ..... ..H ..S.....T.... ......W..G.....    A/zhejiang/06/99(H3N2)
  65 H-H3N2:     . .K.Y. ..H ..S.....T...V ......W..GL....    A/Texas/57/93(H3N2)
  65 H-H3N2:     . ..... ... ....YN....... ..........IP...    A/Western Australia/78/2005(H3N2)
  64 H-H3N2:     . .E.Y. ..H ..S..RE.T...V ......W..GL....    A/Victoria/2/90(H3N2)
  58 H-H3N2:     . ..... ... .....N....... ...........P...    A/Zhejiang/95/03(H3N2)
  57 H-H3N2:     . ..... ... .....N...F... .........NIP...    A/Zhejiang/209/05(H3N2)
  53 H-H3N2:     . .K.Y. ..H ..S.....T...V ...F..W..GL....    A/New York/752/1993(H3N2)
  45 H-H3N2:     . .K.Y. ..H ..S.....T...V D..Y..W..GL....    A/Texas/5/94(H3N2)
  44 H-H3N2:     . ..... ... ....NN....... ..........IP...    A/Whanganui/69/2004(H3N2)
  43 H-H3N2:     . .G.Y. ..Y ..S..KE.TN..V ......W..GL....    A/Wellington/4/85(H3N2)
  36 H-H3N2:     . .G.Y. ..H ..S..RE.TN..V ......W..GL....    A/Wellington/5/89(H3N2)
  34 H-H3N2:     . .G.Y. ..H ..S.....T...V ......W..GQ....    A/Yokohama/73/92(H3N2)
  33 H-H3N2:     . ..... ..H ............. ...............    A/zhejiang/8/2002(H3N2)
  30 H-H3N2:     . .G.Y. ..H ..S.....T...V ......W..GL....    A/Stockholm/12/92(H3N2)
  28 H-H3N2:     . ..... ..H ............. ....G.W..G.....    A/New York/97/2002(H3N2)
  25 H-H3N2:     . ...F. ..H ..S.....T.... ......W..G.....    A/Zhejiang/18/98(H3N2)
  25 H-H3N2:     . ...Y. ..H ..S.....T...V ......W..GI....    A/Washington/5/96(H3N2)
  23 H-H3N2:     . .D.Y. ..H ..S..RE.T...I ......W..GL....    A/Wellington/66/92(H3N2)
  22 H-H3N2:     . .G.N. ... ..S.NQE.T...V ......W..GL....    A/Northern Territory/1960(H3N2)
  21 H-H3N2:     . .G.N. ..Y ..S..QE.T...V ......W..GL....    A/Udorn/72(H3N2)
  17 H-H3N2:     . .G.Y. ..H ..I..RE.TN..V ......W..GL....    A/Tokyo/1276/(H3N2)
  15 H-H3N2:     . ..... ..H ..S.......... ......W..G...I.    A/Taiwan/0275/2000 (H3N2)
  15 H-H3N2:     . ..... ... ............. ..........I....    A/Western Australia/58/2004(H3N2)
  14 H-H3N2:     . .G.Y. ..H ..S..R..T...V ......W..GQ....    A/Shanghai/24/90(H3N2)
  13 H-H3N2:     - ..... ..H ..S.......... ......W..G.....    A/Zaragoza/RR658/00(H3N2)
  13 H-H3N2:     . .G.Y. ..Y ..S..KE.TN..V ...P..W..GL....    A/Stockholm/4/(H3N2)
  13 H-H3N2:     . ..... ... .........N... ...........P...    A/Zhejiang/80/03(H3N2)
  13 H-H3N2:     . ...Y. ..H ..S.....T...V ......W..G...I.    A/Wisconsin/3/96(H3N2)
  12 H-H3N2:     . .G... ..Y ..S..KE.TD..V .V....W..GL...V    A/Rotterdam/5828/77(H3N2)
  12 H-H3N2:     . ..... ... ............. ...........P...    A/Zhejiang/92/03(H3N2)
  11 H-H3N2:     . .G.Y. ..Y ..S..KE.TN..V .V....W..GL....    A/Texas/1/77(H3N2)
  11 H-H3N2:     . .K.Y. ..H ..S.....T...V ......W..GQ....    A/Wuzhou/1/94(H3N2)
  11 H-H3N2:     . ..... ..H ............. ..........I....    A/StaCatarina/327/02(H3N2)
  10 H-H3N2:     - ...Y. ..H ..S.....T...V ......W..G.....    A/Madrid/SO1747/98(H3N2)
  10 H-H3N2:     . ..... ... .....N....... ...............    A/Waikato/108/2003(H3N2)
   9 H-H3N2:     . .E.Y. ..H ..I..RE.T...V ......W..GL....    A/Washington/15/91(H3N2)
   9 H-H3N2:     . .G.N. ..Y ..S..QE.TN..V ......W..GL....    A/Port Chalmers/73(H3N2)
   9 H-H3N2:     . ..... ... .....N..T.... ..........IP...    A/Waikato/2/2005(H3N2)
   8 H-H3N2:     - ...Y. ..H ..S.....T.... ......W..G.....    A/San Sebastian/RR390/98(H3N2)
   8 H-H3N2:     . .E.Y. ..H ..S..RE.T...I ......W..GL....    A/Stockholm/20/91(H3N2)
   8 H-H3N2:     . ..... ..H ............. ......W..G...K.    A/Western Australia/35/2002(H3N2)
   8 H-H3N2:     . ..... ... ............. ..........X....    A/New York/473/2003(H3N2)
   7 H-H3N2:     . .K.YS ..H ..S.....T...V D..Y..W..GL....    A/Spain/378/95(H3N2)
   7 H-H3N2:     . ...F. ..H ........T.... ......W..G.....    A/Virginia/21817/99(H3N2)
   7 H-H3N2:     . ..... ..H ..S.......... ......W..G...K.    A/South Australia/147/99(H3N2)
   7 H-H3N2:     . ..... ..H ..S.....T.... ......W..GI....    A/Neuquen/V690/98(H3N2)
   7 H-H3N2:     . ..... ... .....N....... ..........I....    A/Zhejiang/550/04(H3N2)
   7 H-H3N2:     . ..... ... .....N....... S......I...P...    A/Turkey/2108/2005(H3N2)
   7 H-H3N2:     . ...Y. ..H ..S.....T.I.V ......W..GI....    A/zhejiang/10/98(H3N2)
   6 H-H3N2:     . .K.Y. ..H ..S.....T...V ...F..W..GQ....    A/Vermont/3/94(H3N2)
   6 H-H3N2:     . ..... ..H ............. ......W..G...I.    A/United Kingdom/C4-13/2003(H3N2)
   6 H-H3N2:     . ..... ..H ..S.......... ....G.W..G.....    A/South Australia/71/2000(H3N2)
   6 H-H3N2:     . ..... ... .....N...F... S........NIP...    A/Sri Lanka/146/2005(H3N2)
   6 H-H3N2:     . ...Y. ..H ..S.....T.I.V ......W..G.....    A/Wuzhou/19/96(H3N2)
   5 H-H3N2:     - ..... ... ............. ...............    A/Yilan/566/04(H3N2)
   5 H-H3N2:     . .G.Y. ..Y ..S.EKE.TN..V ......W..GL....    A/Stockholm/10/85(H3N2)
   5 H-H3N2:     . .K.Y. ..H ..S.....T...V D..Y..W..GQ....    A/Paris/363/95(H3N2)
   5 H-H3N2:     . .K.YS ..H ..S.....T...V ......W..GL....    A/Stockholm/1/93(H3N2)
   5 H-H3N2:     . .K.YT ..H ..S.....T...V ......W..GL....    A/Wyoming/1/93(H3N2)
   4 H-H3N2:     . .E.Y. ..H ..S..RE.TK..V ......W..GL....    A/Beijing/353/89(H3N2)
   4 H-H3N2:     . .G.Y. ..H ..S..RE.TK..V ......W..GL....    A/Colorado/2/(H3N2)
   4 H-H3N2:     . .G.Y. ..H ..S..RE.TN..V ......W..GQ....    A/Czechoslovakia/19/89(H3N2)
   4 H-H3N2:     . .G.Y. ..Y ..I.EKE.TN..V ......W..GL....    A/Stockholm/8/(H3N2)
   4 H-H3N2:     . .G.YT ..Y ..S..KE.TN..V ......W..GL....    A/Memphis/7/85(H3N2)
   4 H-H3N2:     . .K.Y. ..H ..S.....T...V ...F..W..GL..G.    A/Pennsylvania/9/93(H3N2)
   4 H-H3N2:     . .K.Y. ..H ..S.....T...V ...Y..W..GL....    A/Washington/26/93(H3N2)
   4 H-H3N2:     . .K.YS ..H ..S.....T...V ...F..W..GL....    A/Washington/41/93(H3N2)
   4 H-H3N2:     . .K.YS ..H ..S.....T...V ......W..GI....    A/New York/635/1996(H3N2)
   4 H-H3N2:     . .K.YX ..H ..S.....T...V ......W..GL....    A/New York/772/1993(H3N2)
   4 H-H3N2:     . ..... ... .....N....... ..........XP...    A/Finland/484/2004 (H3N2)
   4 H-H3N2:     . ..... ... ............. ......K...I....    A/Stockholm/26/2002(H3N2)
   4 H-H3N2:     . ..... ... ............. .......I.......    A/South Korea/C5-4/2002(H3N2)
   4 H-H3N2:     . ..... ... ........T...V ......W..G.....    A/Kyongbuk/320/2002(H3N2)
   4 H-H3N2:     . ....S ..H ............. ......W..G.....    A/New York/216/2003(H3N2)
   4 H-H3N2:     . ...Y. ..H ..S.....TR..V ......W..GI....    A/Guangzhou/6/96(H3N2)
   4 H-H3N2:     . ...Y. ..H ..S.....T.... ......W..G...I.    A/Sydney/05/97-like(H3N2)
   4 H-H3N2:     . ...Y. ..H ..S...V.T...V ......W..GI....    A/Nanchang/933/95(H3N2)
   4 H-H3N2:     . ...Y. ..H ..S...V.T...V ......W..G.....    A/thailand/94/96(H3N2)
   4 H-H3N2:     . ...Y. ..H ..S.N...T.... ......W..G.....    A/Seoul/69/97(H3N2)

                ....G.N....Y...S..RE..N..V..V....W..GL....
   8 S-H3N2:     Y GGSNA WLY HPSTDREQINLYV NVGSRPWVRGLSSRI     A/Swine/Netherlands/L2/93(H3N2)
   6 S-H3N2:     . ...S. ... ............. ...............    A/Swine/Spain/39139/2002(H3N2)
   6 S-H3N2:     . ...YS ..H .....S..TS... .I........I....    A/Swine/Texas/4199-2/98(H3N2)
   6 S-H3N2:     . .S.Y. ..H ..G...D.T.... .I........V..I.    A/swine/Quebec/Biovet1/05(H3N2)
   4 S-H3N2:     . .T.S. ..H .....SD..SV.A .I........I....    A/swine/Guangdong/5/2003(H3N2)
   4 S-H3N2:     . .T.Y. ..H .....SD.TS... .I........V..I.    A/Swine/Wisconsin/14094/99(H3N2)

                ....K.G....K......T..T...K..I........Q.G..
  27 A-H4N6:     Y GKSGA WLK HPSTDTEQTNLYK NIGSRPWVRGQSGRI     A/pintail/Alberta/269/2001(H4N6)
  10 A-H4N2:     . ..... ... ............. ...............    A/pintail duck/ALB/599/1979(H4N2)
  10 A-H4N8:     . ..... ... ............. ...............    A/pintail duck/ALB/220/1977(H4N8)

                .....................................L.S..
   2 S-H4N6:     Y GKSGA WLK HPSTDTEQTNLYK NIGSRPWVRGLSSRI     A/Swine/Ontario/01911-2/99 (H4N6)

                ....V.S....I..SNDAA...K..Q.K.AT.SK.N.Q.G.M
 249 A-H5N1:     Y GVSSA WLI HSNDAAEQTKLYQ KIATRSKVNGQSGRM     A/white-backed munia/Hong Kong/2469/2006(H5N1)
 203 A-H5N1:     . ..... ... .P........... R..............    A/white peafowl/Bangkok/Thailand/CU-29/04(H5N1)
 201 A-H5N1:     . ..... ... .P.......R... ...............    A/wild duck/Shanghai/59/04(H5N1)
 115 A-H5N1:     . ..... ... .P........... ...............    A/tree sparrow/Henan/4/2004(H5N1)
  40 A-H5N1:     . ..... ... .P.NE....R... ...............    A/grey heron/Hong Kong/837/2004(H5N1)
  38 A-H5N1:     . ..... ... .P........... E....P.........    A/Silky Chicken/Hong Kong/p17/97 (H5N1)
  30 A-H5N1:     . ..... ... .P......I.... ...............    A/tree sparrow/Henan/3/2004(H5N1)
  30 A-H5N2:     . ..... ... .P......I.... E....P.........    A/chicken/Taiwan/1209/03(H5N2)
  30 A-H5N2:     . ..... ... .P........... E....P.........    A/wigeon/Ohio/379/1988(H5N2)
  25 A-H5N3:     . ..... ... .P........... E....P.........    A/teal/Italy/3812/2005(H5N3)
  22 A-H5N1:     . ..... ... .P..E....R... ...............    A/Quail/Shantou/911/05(H5N1)
  13 A-H5N1:     . ..... ... .P......I.... T..............    A/goose/Guiyang/337/2006(H5N1)
  11 A-H5N1:     . ..... ... .P.......RI.. ...............    A/Duck/Hunan/191/05(H5N1)
  10 A-H5N1:     . ..... ... .P.NE........ ...............    A/goose/Guangxi/3714/2005(H5N1)
  10 A-H5N9:     . ..... ... .P........... E....P.........    A/mallard/Sweden/80/02(H5N9)
   9 A-H5N1:     - ..... ... ............. ...............    A/goose/Yunnan/3359/2006(H5N1)
   7 A-H5N1:     - ..... ... .P.......R... ...............    A/turkey/Suzdalka/Nov-01/05(H5N1)
   7 A-H5N1:     . ...A. ... .P........... R..............    A/wild bird/Vietnam/434/2005(H5N1)
   7 A-H5N2:     . ..... ... .P........... E....PR........    A/duck/NY/44018-2/00(H5N2)
   6 A-H5N1:     . ...A. ... .P........... ...............    A/slaty-backed gull/Shandong/59/04(H5N1)
   6 A-H5N1:     . ..... ... .P..E....R... ..............I    A/quail/Viet Nam/15/2005(H5N1)
   6 A-H5N1:     . ..... ... ........I.... ...............    A/goose/Shantou/11989/2006(H5N1)
   6 A-H5N2:     . ..... ... .P......A.... I....P.........    A/Chicken/Pennsylvania/10210/86(H5N2)
   6 A-H5N2:     . ..... ... .P......A.... .....P.........    A/Turkey/Virginia/6962/83(H5N2)
   6 A-H5N2:     . ..... ... ............. .....PQ....R...    A/chicken/Guatemala/45511-5/00 (H5N2)
   5 A-H5N1:     . ..... ... .P...T....... ...............    A/goose/Guiyang/3610/2005(H5N1)
   5 A-H5N1:     . ..... ... .P.N.E....... ......R........    A/Goose/Hong Kong/ww491/2000(H5N1)
   4 A-H5N1:     . ..... ... .P......I.... R..............    A/Hatay/2004/(H5N1)
   4 A-H5N1:     . ..... ... .P........... ..............I    A/goose/China/F3/2004(H5N1)
   4 A-H5N1:     . ..... ... .P...T....... R..............    A/chicken/Thailand/Kamphaengphet-3-07/2005(H5N1)
   4 A-H5N2:     . ..... ... .P........... .....P........I    A/emu/Texas/39442/93(H5N2)
   4 A-H5N2:     . ..... ... .P......V.... V....PR........    A/chicken/Puebla/231-5284/98 (H5N2)
   4 A-H5N6:     . ..... ... .P........... E....P.........    A/mallard/Sweden/40/02(H5N6)

                ..............P............R..............
   2 C-H5N1:     Y GVSSA WLI HPNDAAEQTKLYQ RIATRSKVNGQSGRM     A/dog/Thailand-Suphanburi/KU-08/04(H5N1)

                ...........................E....P.........
   3 E-H5N2:     Y GVSSA WLI HPNDAAEQTKLYQ EIATRPKVNGQSGRM     A/environment/NY/5626-2/98(H5N2)

                ......................R....K....S.........
   1 F-H5N1:     Y GVSSA WLI HPNDAAEQTRLYQ KIATRSKVNGQSGRM     A/feline/Indonesia/CDC1/2006(H5N1)

                ..........................................
  45 H-H5N1:     Y GVSSA WLI HPNDAAEQTRLYQ KIATRSKVNGQSGRM     A/Indonesia/CDC742/2006(H5N1)
  18 H-H5N1:     . ..... ... .........K... R..............    A/Viet Nam/DN-33/2004(H5N1)
  15 H-H5N1:     . ..... ... .........K... E....P.........    A/Hong Kong/486/97(H5N1)
   4 H-H5N1:     . ..... ... ............. ...........N...    A/Hong Kong/213/03(H5N1)

                ......................K....R..............
   1 L-H5N1:     Y GVSSA WLI HPNDAAEQTKLYQ RIATRSKVNGQSGRM     A/leopard/Suphanburi/Thailand/Leo-1/04(H5N1)

                ...........................K..............
   2 S-H5N1:     Y GVSSA WLI HPNDAAEQTKLYQ KIATRSKVNGQSGRM     A/swine/Fujian/F1/2001(H5N1)

                ...........................R..............
   8 T-H5N1:     Y GVSSA WLI HPNDAAEQTKLYQ RIATRSKVNGQSGRM     A/tiger/Thailand/SPB-1(H5N1)

                ...........................E....P.........
   2 U-H5N2:     Y GVSSA WLI HPNDAAEQTKLYQ EIATRPKVNGQSGRM     A/unknown/NY/118547-11/01(H5N2)

                .....T....IK...P.EV..AN..G....D..PA...R..I
  14 A-H6N8:     Y GVTSA WIK HPPDEVEQANLYG EIADRPPANGQRGRI     A/Redhead/Alberta/291/94(H6N8)
  10 A-H6N1:     . ...K. ... ....TN..NT... ...A..AV.......    A/turkey/Germany/R30/99(H6N1)
  10 A-H6N2:     . ..S.. ... ....TN..NT... ...A..AV.......    A/duck/Hong Kong/3600/99 (H6N2)
  10 A-H6N2:     . ...K. ... ....TN..NT... ...A..AV.......    A/turkey/Canada/63(H6N2)
   9 A-H6N1:     . ...N. ... ....TTV.D.... ...A..AV....S..    A/duck/Taiwan/WB239/03(H6N1)
   9 A-H6N2:     . ..... ... ............. ...............    A/pintail/Ohio/351/1987(H6N2)
   8 A-H6N5:     . ...K. ... ....TN..NT... ...A..AV.......    A/turkey/Germany/R43/98(H6N5)
   8 A-H6N8:     . ...K. ... ....TN..NT... ...A..AV.......    A/turkey/France/01062/2001(H6N8)
   7 A-H6N1:     . .T.RS ... ...NTD..DT... ...A..AV.......    A/Teal/Hong Kong/W312/97(H6N1)
   6 A-H6N1:     . ...N. ... ....TTV.DT... ...A..AV....S..    A/chicken/Taiwan/1215/01(H6N1)
   6 A-H6N2:     . ...R. ... ....TDA.N.... ...A..VV.......    A/chicken/California/905/01(H6N2)
   5 A-H6N2:     . ...R. ... ....TNA.N.... ..SA..VV.......    A/Chicken/California/6643/2001(H6N2)
   5 A-H6N2:     . ..... ... ....DN....... ...S...V.......    A/pintail duck/ALB/133/1978(H6N2)
   5 A-H6N3:     . ..... ... ............. ...............    A/mallard duck/ALB/76/1985(H6N3)
   5 A-H6N6:     . ..... ... ............. .......V.......    A/widgeon/ALB/256/1982(H6N6)
   4 A-H6N2:     . ..... ... ............. ...G...........    A/shoveler/ALB/114/1985(H6N2)
   4 A-H6N5:     . ...R. ... ....TN..NT... ...A..AV.......    A/Shearwater/Australia/1/72(H6N5)

                ....A.....LN..SESVS..TK....SPGA.--------..
  39 A-H7N2:     Y GATSA WLN HSESVSEQTKLYG SPGAR--------RI     A/turkey/VA/67/02(H7N2)
  22 A-H7N1:     . ..... ... ..G.TT....... .....PQVNGQSG..    A/turkey/Italy/977/99 (H7N1)
  22 A-H7N1:     . .T..T ... ..G.TT....... ...E.PQVNGQSG..    A/turkey/Italy/5074/99 (H7N1)
  20 A-H7N7:     . ..... ... ..G.TT....... .....PQVNGQSG..    A/turkey/Germany/R11/01(H7N7)
  15 A-H7N3:     . ..... ... ..G.TT....... .....PQVNGQSG..    A/turkey/Oregon/1971(H7N3)
  14 A-H7N3:     . ..... ... ..G.AT....... .....PQVNGQSG..    A/Turkey/Colorado/13356/91 (H7N3)
   8 A-H7N2:     . .T... ... ............. .T.............    A/Chicken/Pennsylvania/13552-1/98 (H7N2)
   8 A-H7N7:     . ...N. ... ..G.TT....... .....PQVNGQSG..    A/Mallard/Sweden/93/02(H7N7)
   7 A-H7N1:     . ..... ... ..G.TA....... .....PQVNGQSG..    A/parrot/England/1174/94(H7N1)
   7 A-H7N2:     . ..... ... ..G.......... .....PQVNGQSG..    A/Chicken/Rhode Island/4328/95 (H7N2)
   6 A-H7N3:     . .V... ... ..G.AN....... .....PQVNGQSG..    A/turkey/Chile/4418/02(H7N3)
   5 A-H7N1:     . .T... ... ..G.TT....... .....PQVNGQSG..    A/turkey/Italy/4857/99 (H7N1)
   4 A-H7N1:     . ..... ... ..V.TT....... .L...PQVNGQSG..    A/turkey/Italy/4042/99 (H7N1)
   4 A-H7N1:     . ..... ... ..V.TT....... .....PQVNGQSG..    A/turkey/Italy/2715/99 (H7N1)
   4 A-H7N2:     . ..... ... ............. N..............    A/guineafowl/NY/4649-18/2006(H7N2)
   4 A-H7N3:     . ..... ... ..G.AN....... .....PQVNGQSG..    A/Quail/Arkansas/16309-7/94 (H7N3)
   4 A-H7N3:     . ....S ... ..G.TT...R... .....PQVNGQSG..    A/peregrine falcon/U.A.E./188/2384/98(H7N3)
   4 A-H7N7:     - ----- --- ..G.TT....... .....PQVNGQSG..    A/Mongolia/736/02(H7N7)

                ....E..........G.TA...R....N..P.PQINGQSG..
   6 E-H7N7:     Y GETSA WLN HSGSTAEQTRLYG NPGPRPQINGQSGRI     A/equine/Sao Paulo/1/76(H7N7)

                ....A......S......T...K....S..A...V.......
   1 H-H7N1:     Y GATSA WLS HSGSTTEQTKLYG SPGARPQVNGQSGRI     A/Hong Kong/301/78(H7N1)

                ....T......N..........R...................
   1 S-H7N7:     Y GTTSA WLN HSGSTTEQTRLYG SPGARPQVNGQSGRI     A/seal/Mass/1/80(H7N7)

                .....SK....K..PPD.K...T..K.NI.P..L.R..Q..M
   7 A-H8N4:     Y GTSKA WLK HPPDTKEQTTLYK NIGPRPLVRGQQGRM     A/Turkey/Ontario/6118/68(H8N4)

                ...........T....TDTA..N..T.L.......N.L...I
  39 A-H9N2:     Y GTSKA WLT HPPTDTAQTNLYT LIGPRPLVNGLQGRI     A/Silky Chicken/Hong Kong/SF44/99(H9N2)
  17 A-H9N2:     . ..... ... ............I V......A.......    A/turkey/Tzur Moshe/1565/04(H9N2)
  17 A-H9N2:     . ..... ... ......V...... ...............    A/wild duck/Nanchang/2-0480/2000(H9N2)
  16 A-H9N2:     . ..... ... ......E.....K V.........Q....    A/mallard/Alberta/321/88(H9N2)
  14 A-H9N2:     . ..... ... ......E.M...K V.........Q....    A/silky chicken/Korea/S3/03(H9N2)
  13 A-H9N2:     - ----- --- ----........I V......A.......    A/turkey/Shadmot Dvorah/1567(H9N2)
  11 A-H9N2:     - ----- --- ----..E.....I V.........Q....    A/turkey/Sapir/1199/02(H9N2)
  11 A-H9N2:     . ..... ... ......V...... ..........Q....    A/duck/Hubei/W1/2004(H9N2)
  10 A-H9N2:     - ----- --- ----........I V..............    A/turkey/Kfar Vitkin/616/02 (H9N2)
  10 A-H9N2:     . ..... ... ............. V.........Q....    A/chicken/Shandong/7/96(H9N2)
   9 A-H9N2:     . ..... ... ............I V..............    A/turkey/Kfar Vitkin/616/02 (H9N2)
   8 A-H9N2:     . ..... ... ............. M.........Q....    A/Chicken/Shanghai/F/98(H9N2)
   7 A-H9N2:     - ----- --- ----........I V......A..Q....    A/turkey/Nahalal/1547/04(H9N2)
   6 A-H9N2:     - ----- --- -...E.......I M.........Q....    A/chicken/Iran8/01(H9N2)
   6 A-H9N2:     . ..... ... ............. V..............    A/quail/Nanchang/2-0460/2000(H9N2)
   6 A-H9N2:     . ..... ... ......E.....I V.........Q....    A/turkey/Yedidia/911/02(H9N2)
   6 A-H9N2:     . ..... ... ......T...... ...............    A/Quail/Shanghai/8/96(H9N2)
   6 A-H9N2:     . ..... ... ......V...... V.........Q....    A/Chicken/Sichuan/5/97(H9N2)
   6 A-H9N2:     . ...R. ... ......E.....K V.........Q....    A/turkey/Germany/R33/96(H9N2)
   6 A-H9N2:     . ...R. ... ....Y.E.....I V..............    A/Quail/Hong Kong/SSP10/99(H9N2)
   5 A-H9N1:     . ..... ... .....AE.....K V.........Q....    A/mallard/Alberta/743/83(H9N1)
   5 A-H9N2:     . ..... ... ............I V......A..Q....    A/turkey/Gyvat Haim Ehud/1544/03(H9N2)
   5 A-H9N2:     . ..... ... ......E.I...K V.....P...Q....    A/chicken/SNU0146/2000(H9N2)
   5 A-H9N2:     . ..... ... ......T...... ..........Q....    A/chicken/Yunnan/Xie-1/1999(H9N2)
   5 A-H9N2:     . ..... ... ......T...... V.........Q....    A/duck/Nanjing/2/97(H9N2)
   5 A-H9N2:     . ...R. ... ......V..E... M.........Q....    A/Chicken/Shijiazhuang/2/99(H9N2)
   4 A-H9N2:     . ..... ... .....AE.....K V.........Q....    A/Duck/Hong Kong/366/78(H9N2)
   4 A-H9N2:     . ..... ... ............. ..........Q....    A/Chicken/Yunnan/1/99(H9N2)
   4 A-H9N2:     . ..... ... ......E.I...K V.........Q....    A/duck/Hokkaido/49/98(H9N2)
   4 A-H9N2:     . ..... ... N............ S..............    A/Duck/Shantou/2144/00(H9N2)
   4 A-H9N2:     . ...R. ... ......E..D..K V.........Q....    A/Turkey/Wisconsin/66(H9N2)

                ......R..........Y.E.....I.V..............
   3 H-H9N2:     Y GTSRA WLT HPPTYTEQTNLYI VIGPRPLVNGLQGRI     A/Hong Kong/1074/99(H9N2)

                ......K..........D...M...K...........Q....
   4 S-H9N2:     Y GTSKA WLT HPPTDTEQMNLYK VIGPRPLVNGQQGRI     A/swine/Korea/S83/2004(H9N2)
   4 S-H9N2:     . ..... ... ......V.T...T ..........LH...    A/Swine/Hong Kong/9/98(H9N2)

                .....T.....K...SSTQ.KND..G..V.A..Q....S...
  17 A-H10N:     Y GTTKA WLK HPSSTQEKNDLYG VVGARPQVNGQSGRI     A/Shorebird/Taiwan/31-4/99)]

                .............................R............
   1 M-H10N:     Y GTTKA WLK HPSSTQEKNDLYG VVRARPQVNGQSGRI     /Mink/4(HA)/H10N4/Sweden/1984

                ....V.A....I...ATLK.HQ...K.EIST..K....A..M
  12 A-H11N:     Y GVTAA WLI HPATLKEHQDLYK EISTRPKVNGQAGRM     A/swan/Shimane/48/1997(H11N2)

                ....TSK....T...P.SD.QVK....N.GP..L.R..Q...
   6 A-H12N:     Y GTSKA WLT HPPTSDEQVKLYK NIGPRPLVRGQQGRM     A/ruddy turnstone/DE/97/2000(H12N5)

                .....TS...FI...VSV..TKT..V.ET.V..GYN..RSW.
   3 A-H13N:     Y GTTSA WFI HPVSVDETKTLYV ETGVRPGYNGQRSWM     A/Gull/Maryland/704/77(H13N6)

                ....SS....LK...S.DN.QTD..K.NI.S..RVRN.SGRI
   1 A-H14N:     Y GSSSA WLK HPSSDNEQTDLYK NIGSRPRVRNQSGRI     A/mallard duck/Astrakhan/263/1982(H14N5)

                ....AT.....S..S..LD..NK..G.SP.A..K.NG.A...
   5 A-H15N:     Y GATSA WLS HSSSLDEQNKLYG SPGARPKVNGQAGRI     A/wedge-tailed shearwater/Western Australia/2576/1979(H15N9)

                .F..T.AS...V..PDTEATA....V.EI.T.-IGD..RSWM
   3 A-H16N:     F GTTAS WLV HPDTEATANKLYV EIGTR-IGDGQRSWM     A/black-headed gull/Sweden/4/99(H16N3)

gsgs · Aug 18, 2010

Re: swine flu sequences (thread from h5n1experts)

-----------------posted:2009/11/19-----------------

Code:

                                     0000000001111122 00000011111111112222 00000000001111112 00000000000000000000001111111 0000111111 000000001111 00000000 000000000  
                                     0345567890245901 33777901344666671111 12345578890223890 00111124444555556667780002445 2355112223 223377891233 22346678 001345677  
                                     4564462715015866 02799655336478970889 95092551440035939 03134465679136771252991185066 9522141247 030124058134 13390969 774647409  
                                     2746717821722013 02058980291870636473 82658839025066341 67455831088647692083662407843 8124836781 483612840524 31320612 058794089  
-codon-position----------------------  2 1112 1121     12   21 2 1  1                     2   1  112111       21 121   1   1  22 1     1 1111 1          21 1 11211 1  
---Index-----------------------------CCGGCGAGGAGCGGGG ACCGTAATCAATTGAACCCG TAGACTAGACCCTCCTT GGACCCCGCAAACAGACGTAGCGCGACCG GGAGCGAGGC CGTGGAACGTCA GAGGGCCG GTCATGCTA  
   1 >A/******/index/2009/02/01      ................ .................... ................. ............................. .......... ............ ........ .........  
   3 >A/WI/629-D01844/2009/06/15     ...A.......T.... G.....G.......G..T.. C..G.C...T....... ....A.......T................ .......... .A........T. ........ .........  
   4 >A/WI/629-D01313/2009/05/08     ...A.......T.... G.....G.......G..... C..G............. ....A........................ .......... .A........T. ........ .........  
   5 >A/WI/629-D01619/2009/06/15     ...A.......T.... G.....G.......G..... C..G............. ....A........................ .......... .A........T. ........ .........  
   6 >A/WI/629-D02013/2009/05/30     ...A.......T.... G.....G.......G..... C..G............. ....A........................ .......... .A........T. ........ .........  
   7 >A/WI/629-D00022/2009/06/02     ...A.......T.... G.....G.......G..T.. C..G.C...T....... ....A.......T................ .......... .A........T. ........ .........  
   8 >A/WI/629-D02220/2009/06/21     ...A.......T.... G.....G.......G..... C..G............. ....A..................T..... .......... .A........T. ........ .........  
   9 >A/WI/629-S0252/2009//          .T.A............ GT....G............. ................. ....A........G..............A .......... ............ ........ ........G  
  10 >A/WI/629-D02263/2009/06/12     .T.A............ GT....G............. ................. ....A........G..............A .......... ............ ........ ........G  
  11 >A/WI/629-D00724/2009/06/01     .T.A............ GT....G............. ................. ....A........G..............A .......... ............ .....Y.. ........G  
  12 >A/WI/629-S0035/2009//          .T.A............ GT....G............. ................. ....A........G..............A .......... ............ ........ ........G  
  13 >A/WI/629-D02312/2009/05/02     ...AA........... .................... ................. .A.................G.T....... .......... ............ ........ .........  
  14 >A/WI/629-D02452/2009/05/08     ...AA........... .................... ................. .A.................G.T....... .......... ............ ........ .........  
  15 >A/WI/629-D01226/2009/05/04     ...AA........... .................... ................. .A.................G.T....... .......... ............ ........ .........  
  16 >A/WI/629-D00790/2009/05/04     ...AA........... .................... ................. .A.................G.T....... .......... ............ ........ .........  
  17 >A/WI/629-D00722/2009/05/19     ...AA........... .................... ................. .A.................G.T....... .......... ............ ........ .........  
  18 >A/WI/629-D01606/2009/05/03     ...AA........... .................... ................. .A.................G.T....... .......... ............ ........ .........  
  19 >A/WI/629-D00725/2009/06/04     ...AA........... .................... ................. .A.................G.T....... .......... ............ ........ .........  
  20 >A/WI/629-S0319/2009//          ...AA........... .................... ................. .A.................G.T....... .......... ............ ........ .........  
  21 >A/WI/629-D01154/2009/05/13     ...AA........... .................... ................. .A.................G.T....... .......... ............ ........ .........  
  22 >A/WI/629-D00244/2009/05/02     ................ .................... ................. ............................. ...AT..... ............ ........ .........  
   2 >A/WI/09/2009/04/27             ---------------- -------------------- ----------------- ........................A.... ....T..... ............ ........ ---------  
  23 >A/WI/629-D02473/2009/05/03     ................ ...............G.... ................. ............................. .......... ............ ........ .........  

 189 >A/Cancun-NY/Index/2009/04/15   ...............A .................... ................. ..................A.......T.. A....A..A. ...A.G...... ...AA... ...G.....  
  24 >A/WI/629-D01147/2009/06/14     ...............A .................... ....T..A......... .......A..........A.......TT. A....A..A. ...A.G...... ...AA... .C.G.....  
  25 >A/WI/629-D01445/2009/05/24     ...............A .................... ....T..A......... .......A..........A.......TT. A....A..A. ...A.G...... ...AA... .C.G.....  

  39 >A/WI/629-D01664/2009/06/03     ..............A. ..........T......... ................. .................A........T.. A....A...T ...A.G.T.... .....T.A .........  
  65 >A/WI/629-D00658/2009/06/04     ................ ........T........... ................. .................A........T.. A....A.... ...A.G.T.... .....T.A .........  
  26 >A/WI/629-D01764/2009/05/04     ................ .................... ................. ..........................T.. A....A.... ...A.G.T.... .....T.A .........  
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 167 >A/WI/629-D00579/2009/06/08     .........G...A.. .......C.....A...... ................. .....T........A...........T.. A....A.... ...A.G.T.... .....T.A .........  
 168 >A/WI/629-D02227/2009/05/16     .........G...... .......C...C.A...... ................. .....T........A...........T.. A....A.... ...A.G.T.... .....T.A .........  
 169 >A/WI/629-D01305/2009/05/13     .........G...... .......C.....A...... ................. ..............A...........T.. A....A.... ...A.G.T.... .....T.A .........  
 170 >A/WI/629-D01705/2009/05/03     ................ .................... ................. ......T...................T.. A....A.... ...A.G.T.... .....T.A .........  
 171 >A/WI/629-D00592/2009/06/02     ................ .................... ................. ..........................T.. A....A.... ...A.G.T.... .....T.A ......T..  
 172 >A/WI/629-D00374/2009/06/01     ................ .................... ................. ..........................T.. A....A.... ...A.G.T.... A....T.A ......T..  
 173 >A/WI/629-S0186/2009//          ................ .................... ................. .......................T..T.. A....A.... ...A.G.T.... A....T.A .........  
 174 >A/WI/629-D01886/2009/05/27     ................ .................... ................. ..........................T.. A....A.... ...A.G.T.... A....T.A .........  
 175 >A/WI/629-D01903/2009/06/05     ................ .................... ................. ..........................T.. A....A.... ...A.G.TA... A....T.A .........  
 176 >A/WI/629-D01026/2009/05/28     ................ .................... ................. ..........................T.. A....A.... ...A.G.TA... A....T.A .........  
 177 >A/WI/629-S0222/2009//          ................ .................... ................. ..........................T.. A....A.... ...A.G.T.... A....T.A .........  
 178 >A/WI/629-S0280/2009//          ................ .................... ................. ..........................T.. A....A.... ...A.G.T.... A....T.A .........  
 179 >A/WI/12/2009/05/07             ---------------- -------------------- ----------------- ..........................T.. ---------- ...A.G.T.... -------- ---------  
 180 >A/WI/629-S0345/2009//          ......T......... .................... ................. ..........................T.. A....A.... ...A.G.T.... .....T.A .........  
 181 >A/WI/07/2009/04/27             ---------------- -------------------- ----------------- ..........................T.. ---------- ...A.G.T.... -------- ---------  
 182 >A/WI/629-S0254/2009//          ................ .............A...... .............T... ..........................T.. A....AG... ...A.G.T.... .....T.A .........  
 183 >A/WI/629-D01415/2009/05/04     ................ .........G.......... .............T... ..........................T.. A....AG... ...A.G.T.... .....T.A .........  
 184 >A/WI/629-D01251/2009/05/04     ................ .........G.......... .............T... ..........................T.. A....AG... ...A.G.T.... .....T.A .........  
 185 >A/WI/629-D00183/2009/05/04     ................ .........G.......... .............T... .......................T..T.. A....AG... ...A.G.T.... .....T.A .........  
 186 >A/WI/629-D02028/2009/05/01     ................ .................... ................. ..........................T.. A....AG... ...A.G.T.... .....T.A .........  
 187 >A/WI/629-D01847/2009/05/29     ................ .................... ...............C. ..........C...............T.. A....A.... ...A.G.T.... ..A..TTA .........  
 188 >A/WI/629-D00916/2009/06/14     ................ .................... ...............C. ..........C...............T.. A....A.... ...A.G.T.... ..A..TTA .........  
 189 >A/Cancun-NY/Index/2009/04/15   ...............A .................... ................. ..................A.......T.. A....A..A. ...A.G...... ...AA... ...G.....  
                                                                                                                                                                       
---Index-----------------------------CCGGCGAGGAGCGGGG ACCGTAATCAATTGAACCCG TAGACTAGACCCTCCTT GGACCCCGCAAACAGACGTAGCGCGACCG GGAGCGAGGC CGTGGAACGTCA GAGGGCCG GTCATGCTA  
-codon-position----------------------  2 1112 1121     12   21 2 1  1                     2   1  112111       21 121   1   1  22 1     1 1111 1          21 1 11211 1  
                                     0000000001111122 00000011111111112222 00000000001111112 00000000000000000000001111111 0000111111 000000001111 00000000 000000000  
                                     0345567890245901 33777901344666671111 12345578890223890 00111124444555556667780002445 2355112223 223377891233 22346678 001345677  
                                     4564462715015866 02799655336478970889 95092551440035939 03134465679136771252991185066 9522141247 030124058134 13390969 774647409  
                                     2746717821722013 02058980291870636473 82658839025066341 67455831088647692083662407843 8124836781 483612840524 31320612 058794089

gsgs · Aug 18, 2010

Re: swine flu sequences (thread from h5n1experts)

---------------posted:2009/11/19-----------------

Code:

                                     0000112 000112 00011 000000000111111 000111 000000000111 00000 00000   
                                     0158361 445091 15767 122556678014566 236112 223467788033 45669 02337   
                                     7799036 157598 86974 414074513670629 902144 481954609927 92060 97677   
                                     2749853 401859 01771 590760861838365 814838 036842277792 22047 49795   
-codon-position----------------------   2      12 2   2 1 1    112   1    11 2    11  1   2 1    11 1 111   
---Index-----------------------------TATAGGG GTGACT AAGGA CCATGGTATGGCGAT GGGCGG GAGTTAGGGGAC GGGCG TGAAA   
   1 >A/******/index/2009/02/01      ....... ...... ..... ............... ...... ............ ..... .....   
  13 >A/Texas/15/2009/04/15          ....... ...... ..... ............... ...... ............ ..... .....   
  39 >A/Arizona/03/2009/04/26        ------- ------ ----- ............... ------ ............ ..... -----   
  40 >A/Arizona/01/2009/04/22        ....... ...... ..... ............... ...... ............ ..... .....   
  41 >A/Arizona/04/2009/04/27        ------- ------ ----- ............... ------ ............ ..... -----   
  42 >A/Arizona/07/2009/05/07        ------- ------ ----- --------------- ...... ............ ----- .....   

   4 >A/Texas/06/2009/04/23          ....A.. .C.... ----- ..........A.A.. ...... ............ .A... ....G   
   5 >A/Texas/08/2009/04/24          ....A.. .C.... .C... ..........A.A.. ...... ............ .A... ....G   
   6 >A/Texas/05/2009/04/15          ....A.. .C.... .C... .......G..A.A.. ...... ............ .A... ....G   
   7 >A/Texas/11/2009/04/23          ------- ------ ----- .......G..A.A.. .A.... ...........T .A... -----   
   8 >A/Texas/10/2009/04/23          ------- ------ ----- .......R..A.A.. ...... ...........T .A... -----   
   9 >A/Texas/12/2009/04/24          ------- ------ ----- ..........A.A.. ...... ............ .A... -----   
  10 >A/Texas/22/2009/04/26          C...A.. .C.... .C.A. ..........A.A.. ...... A........... .A... C...G   
  11 >A/Texas/09/2009/04/25          C...A.. .C.... .C.A. ..........A.A.. ...... A........... .A... C...G   
  12 >A/Texas/04/2009/04/14          ....A.. .C.... .C... ..........A.A.. ...... ............ .A... ....G   

  28 >A/Texas/35/2009/05/08          ------- ------ ----- --------------- ...T.. ....C....... ----- .....   
  29 >A/Texas/42122969/2009//        ....... ....T. ....C ....A....A..... ...T.. ....C....... ..... .....   
  30 >A/Texas/07/2009/04/25          ....... ....T. ----- ....A....A..... ...T.. ........A... ..... .....   
  31 >A/Texas/28/2009/04/29          ------- ------ ----- ....A....A..... ...T.. ........A... ..... -----   
  32 >A/Texas/34/2009/05/12          ------- ------ ----- ....A....A..... ------ ........A... ..... -----   
  33 >A/Texas/36/2009/04/29          ------- ------ ----- ....A....A..... ------ ............ ..... -----   
  34 >A/Texas/29/2009/05/02          ------- ------ ----- ....A....A...G. ------ .......T.... ----- -----   
  35 >A/Texas/30/2009//              ------- ------ ----- ....A....A...G. ...T.. .......T.... ..... -----   
  36 >A/Arizona/02/2009/04/26        ....... ...... ..A.C ............... ...T.. ............ ..... .....   
  37 >A/Arizona/06/2009//            ------- ------ ----- ............... ...T.. .G.......... ..... -----   
  38 >A/Texas/42113095/2009//        ....... ...... ....C ............... ...T.. .G.......... ..... .....   
  43 >A/Texas/20/2009/04/25          ------- ------ ----- .T.C..........C ------ ............ ..... -----   
  44 >A/Texas/17/2009/04/24          ------- ------ ----- .T.C..........C .A.T.. ............ ..... -----   
  45 >A/Texas/37/2009/04/26          ------- ------ ----- .T.C..........C ------ ............ ..... -----   
  46 >A/New Mexico/04/2009/04/26     ....... ...... ....C ............... ...T.. ............ ..... .....   
   2 >A/Texas/47/2009//              ------- ------ ----- A.............. ------ ............ ----- -----   
  47 >A/Houston/9OS/2009/05/21       .....A. ..A... ....C A.......C...... ...T.. .G.......... ....A .....   
  48 >A/Houston/1OS/2009/05/13       .....A. ..A... ....C A.......C...... ...T.. .G.......... ....A .....   
  49 >A/Houston/2H/2009/05/18        .....A. ..A... ....C A.......C...... ...T.. .G.......... ....A .....   
  50 >A/Texas/42123701/2009//        ...G... ...GT. ....C ..T..T......... ...T.. ...C..A..A.. ...A. ...G.   
  51 >A/Texas/42191653/2009//        ...G... ...GT. ....C ..T..T......... ...T.. ...C..A..A.. ...A. ...G.   
   3 >A/Arizona/09/2009/05/19        ....... ------ G.A.C ............... ...T.. ............ ----- .....   

  14 >A/Texas/45062633/2009//        ......A ...... ..... ......A....T... A...AA ..A..G...... A.A.. ..G..   
  15 >A/Texas/43242018/2009//        ......A ...... G.... ......A....T... A...AA ..A..G...... A.A.. ..G..   
  16 >A/Arizona/05/2009/04/26        ------- ------ ----- --------------- ------ ..A..G...... A.A.. -----   
  17 >A/Texas/42152486/2009//        .TC...A A....C ..... ......A....T... A.A.AA ..A..G...... A.A.. .AG..   
  18 >A/Texas/43011033/2009//        .TC...A A....C ..... ......A....T... A.A.AA ..A..G...... A.A.. .AG..   
  19 >A/Texas/32/2009/05/11          ------- ------ ----- ......A....T... ------ ..A..G...... A.A.. -----   
  20 >A/Texas/42114261/2009//        .T....A .....C ..... ......A....T... A.A.AA ..A..G...... A.A.. .AG..   
  21 >A/Texas/42173957/2009//        .T....A .....C ..... ......A....T... A.A.AA ..A..G...... A.A.. .AG..   
  22 >A/Texas/42201824/2009//        .T....A .....C ..... ......A....T... A.A.AA ..A..G...... A.A.. .AG..   
  23 >A/Texas/39/2009/05/22          ------- ------ ----- ......A....T... ------ ..A..G...... ----- -----  
 
  24 >A/Texas/23/2009/04/27          ....... ...... ----- ...........T... A...A. ..A..G...... ..... .....   
  25 >A/Texas/19/2009/04/26          ------- ------ ----- ...........T... A...A. ..A..G....C. ..... .....   
  26 >A/Texas/33/2009/05/12          ------- ------ ----- --------------- ------ ..A..G....C. ..... -----  
  27 >A/Texas/31/2009/05/12          ------- ------ ----- ...........T... ------ ------------ ----- -----   

  52 >A/Cancun-NY/Index/2009/04/15   ......A ...... ..... ......A....T... A...AA ..A..G...... A.A.. ..G..   
                                                                                                            
---Index-----------------------------TATAGGG GTGACT AAGGA CCATGGTATGGCGAT GGGCGG GAGTTAGGGGAC GGGCG TGAAA   
-codon-position----------------------   2      12 2   2 1 1    112   1    11 2    11  1   2 1    11 1 111   
                                     0000112 000112 00011 000000000111111 000111 000000000111 00000 00000   
                                     0158361 445091 15767 122556678014566 236112 223467788033 45669 02337   
                                     7799036 157598 86974 414074513670629 902144 481954609927 92060 97677   
                                     2749853 401859 01771 590760861838365 814838 036842277792 22047 49795

gsgs · Aug 18, 2010

Re: swine flu sequences (thread from h5n1experts)

---------------posted:2009/11/19---------------------

Code:

                                     0000011111222 000000011112 0000111111 000000000111111111111111111 00011111111 0000000000011111 000000 0000000000 
                                     1125823567011 358888927992 0478034677 011122667122222233446666666 24911222334 2222345577900233 466789 1136778888 
                                     1144718771236 673458516594 3842900849 404616561722223335050467778 92414489553 4458114748549322 909613 5864243444 
                                     0456981743323 617452720551 7013851114 565766856367890109852497890 86383893674 7873640126447039 206073 3973489124 
-codon-position----------------------2 2   12  12   1 1    22   1  1   11   112 2122 2 12 11 1   1 12  1 12  2  1  12211  11   2       11    11112121 
---Index-----------------------------GGAGGAAAAATAG AGGCTAGTTCCT ACCCGTGAAC AGCGTCTGAGCAGTAGGCCCTGATCTA GCCCGGGGGCC GTCAGCACAGCAGACA GGCTTG CAACGTTATA 
   1 >A/******/index/2009/02/01      ............. ............ .......... ........................... ........... ................ ...... .......... 

 113 >A/MexCity/59/2009/05/03        ------------- ------------ ---------- ---------.............----- ----------- ------G....T---- ------ ---------- 
 115 >A/MexCity/22/2009/05/02        ------------- ------------ ---------- ---------.............----- ----------- ------G.....---- ------ ---------- 
 121 >A/MexCity/25/2009/05/02        ------------- ------------ ---------- --------------------------- ----------- ------G.....---- ------ ---------- 
 122 >A/MexCity/72/2009/05/04        ------------- ------------ ---------- ---------.............----- ----------- ------G.....---- ------ ---------- 
 132 >A/MexCity/28/2009/05/02        ------------- ------------ ---------- ---------.............----- ----------- ------G.....---- ------ ---------- 
 138 >A/MexCity/34/2009/05/02        ------------- ------------ ---------- ---------.............----- ----------- ------GT....---- ------ ---------- 
 142 >A/MexCity/35/2009/05/02        ------------- ------------ ---------- ---------.............----- ----------- ------G.....---- ------ ---------- 
 143 >A/MexCity/27/2009/05/02        ------------- ------------ ---------- ---------.............----- ----------- ------G.....---- ------ ---------- 
 144 >A/MexCity/56/2009/05/03        ------------- ------------ ---------- ---------.............----- ----------- ------G.....---- ------ ---------- 
 145 >A/MexCity/62/2009/05/03        ------------- ------------ ---------- ---------.............----- ----------- ------G.....---- ------ ---------- 
 146 >A/MexCity/36/2009/05/02        ------------- ------------ ---------- ---------.............----- ----------- ------G.....---- ------ ---------- 
 147 >A/MexCity/32/2009/05/02        ------------- ------------ ---------- ---------.............----- ----------- ------G.....---- ------ ---------- 
 148 >A/MexCity/12/2009/05/01        ------------- ------------ ---------- ---------.............----- ----------- ------G.....---- ------ ---------- 
 149 >A/MexCity/51/2009/05/03        ------------- ------------ ---------- ---------.............----- ----------- ------G.....---- ------ ---------- 
 150 >A/MexCity/14/2009/05/01        ------------- ------------ ---------- ---------.............----- ----------- ------G.....---- ------ ---------- 
 151 >A/MexCity/52/2009/05/03        ------------- ------------ ---------- ---------.............----- ----------- ------G.....---- ------ ---------- 
 152 >A/MexCity/103/2009/05/04       ------------- ------------ ---------- ---------.............----- ----------- ------G.....---- ------ ---------- 
 153 >A/MexCity/7/2009/05/01         ------------- ------------ ---------- ---------.............----- ----------- ------G.....---- ------ ---------- 
 154 >A/MexCity/2/2009/05/01         ------------- ------------ ---------- ---------.............----- ----------- ------G.....---- ------ ---------- 
 155 >A/MexCity/68/2009/05/05        ------------- ------------ ---------- ---------.............----- ----------- ------G.....---- ------ ---------- 
 156 >A/MexCity/30/2009/05/02        ------------- ------------ ---------- ---------.............----- ----------- ------G.....---- ------ ---------- 
 157 >A/MexCity/21/2009/05/02        ------------- ------------ ---------- ---------.............----- ----------- ------G.....---- ------ ---------- 
 161 >A/MexCity/104/2009/05/04       ------------- ------------ ---------- ---------.............----- ----------- ------G.....---- ------ ---------- 
 163 >A/MexCity/24/2009/05/02        ------------- ------------ ---------- ---------.............----- ----------- ------G.....---- ------ ---------- 
 159 >A/MexCity/75/2009/05/05        ------------- ------------ ---------- ---------.............----- ----------- ------G.G.T.---- ------ ---------- 
  92 >A/MexCity/44/2009/05/03        ------------- ------------ ---------- --------------------------- ----------- ------G.G...---- ------ ---------- 
  93 >A/MexCity/20/2009/05/01        ------------- ------------ ---------- ---------R............----- ----------- ------G.G...---- ------ ---------- 
  94 >A/MexCity/9/2009/05/01         ------------- ------------ ---------- ---------.............----- ----------- ------G.G...---- ------ ---------- 
  95 >A/MexCity/45/2009/05/03        ------------- ------------ ---------- ---------.............----- ----------- ------G.G...---- ------ ---------- 
  96 >A/MexCity/54/2009/05/03        ------------- ------------ ---------- ---------.............----- ----------- ------G.G...---- ------ ---------- 
  97 >A/MexCity/66/2009/05/05        ------------- ------------ ---------- ---------.............----- ----------- ------G.G...---- ------ ---------- 
  98 >A/MexCity/1/2009/05/01         ------------- ------------ ---------- ---------.............----- ----------- ------G.G...---- ------ ---------- 
 112 >A/MexCity/33/2009/05/02        ------------- ------------ ---------- ---------........T....----- ----------- ------G....G---- ------ ---------- 
 111 >A/MexCity/018/2009/05/10       .....G....... ............ .......... .................T......... ........... ...........G.... ...... .......... 

  60 >A/Mex/InDRE13495/2009/04/29    ...A......... ............ .......... ........................... ........... ................ ...... .......... 
  61 >A/MexCity/88/2009/05/02        ------------- ------------ ---------- ---------.............----- ----------- ---------------- ------ ---------- 
  62 >A/Mex/InDRE13494/2009/04/29    ............. ............ .......... ........................... ........... ................ ...... .......... 
  63 >A/MexCity/3/2009/05/01         ------------- ------------ ---------- ---------.............----- ----------- ---------------- ------ ---------- 

  99 >A/MexCity/23/2009/05/02        ------------- ------------ ---------- ---------.............----- ----------- ---------------- ------ ---------- 
 100 >A/Mex/4115/2009/04/07          ..G.......... ............ ...A.....T ........................... ........... ................ ...... .......... 
 101 >A/Mex/InDRE4115/2009//         ..G.......... ............ ...A...... ........................... ........... ................ ...... .......... 
 102 >A/MexCity/93/2009/05/02        ------------- ------------ ---------- ---------.............----- ----------- ---------------- ------ ---------- 
 103 >A/MexCity/017/2009/05/09       ...A......... ............ .......... ........................... ........... .......T........ ...... .......... 
 104 >A/MexCity/19/2009/05/01        ------------- ------------ ---------- ---------.............----- ----------- ---------------- ------ ---------- 
 106 >A/MexCity/10/2009/05/01        ------------- ------------ ---------- ---------.............----- ----------- ---------------- ------ ---------- 
 107 >A/Mex/InDRE4487/2009/04/14     ..G.......... ............ ...A...... ........................... ........... ................ ...... .......... 
 109 >A/Mex/InDRE4114/2009//         ............. ............ .......... ........G.................. ........... ................ ...... .......... 
 110 >A/MexCity/009/2009/05/12       ...A......... ............ .......... ........................... ........... ................ ...... .......... 
 120 >A/MexCity/102/2009/05/02       ------------- ------------ ---------- ---------.............----- ----------- ---------------- ------ ---------- 
 123 >A/MexCity/43/2009/05/03        ------------- ------------ ---------- ---------.............----- ----------- ---------------- ------ ---------- 
 125 >A/MexCity/80/2009/05/05        ------------- ------------ ---------- ---------.............----- ----------- ---------------- ------ ---------- 
 128 >A/MexCity/89/2009/05/02        ------------- ------------ ---------- ---------.............----- ----------- ---------------- ------ ---------- 
 131 >A/MexCity/83/2009/05/01        ------------- ------------ ---------- ---------.............----- ----------- ---------------- ------ ---------- 
 133 >A/MexCity/91/2009/05/02        ------------- ------------ ---------- ---------.............----- ----------- ---------------- ------ ---------- 
 135 >A/MexCity/101/2009/05/02       ------------- ------------ ---------- ---------.............----- ----------- ---------------- ------ ---------- 
 137 >A/MexCity/95/2009/05/02        ------------- ------------ ---------- ---------.............----- ----------- ---------------- ------ ---------- 
 139 >A/MexCity/84/2009/05/01        ------------- ------------ ---------- ---------.............----- ----------- ---------------- ------ ---------- 
 141 >A/MexCity/8/2009/05/01         ------------- ------------ ---------- ---------.............----- ----------- ---------------- ------ ---------- 
 158 >A/MexCity/85/2009/05/02        ------------- ------------ ---------- ---------.............----- ----------- ---------------- ------ ---------- 
 160 >A/MexCity/82/2009/05/05        ------------- ------------ ---------- ---------.............----- ----------- ---------------- ------ ---------- 
 162 >A/MexCity/29/2009/05/02        ------------- ------------ ---------- ---------.............----- ----------- ---------------- ------ ---------- 

  55 >A/Mex/4486/2009/04/14          .......G..... ............ ........C. .........------------------ ...T....... ................ ...... .......... 
  56 >A/Mex/3955/2009/04/03          ------------- ------------ ---------- ........GA......A....A..... ----------- ................ .....A ---------- 
  57 >A/Mex/4108/2009/04/03          ............. ............ ........C. .........A......A....A..... ...T....... ................ .....A .......... 
  58 >A/Mex/4269/2009/04/15          .......G..... ............ ........C. ........................... ...T....... ................ ...... .......... 
  59 >A/Mex/4627/2009/04/20          ------------- ------------ ---------- .........A................. ...T....... ................ ------ ---------- 
 105 >A/Mex/4646/2009/04/20          ............. ..........T. ---------- ........................... ...T....... ................ ...... ---------- 
 116 >A/Mex/6882/2009/04/26          ..........C.. ------------ ---------- --------------------------- ...T....... ---------------- ------ .......... 
 124 >A/MexCity/005/2009/05/08       ............. ..........T. ........C. ........................... ...T....... ................ ...... .......... 
 126 >A/Mex/47N/2009/04/25           ............. .A.......... ........C. ..A.C...................... ...T....... A..G.........G.. ...... .......... 
 127 >A/Mex/48N/2009/04/25           ............. .A.......... ........C. ..A.C...................... ...T....... A..G.........G.. ...... .......... 
 129 >A/Mex/4176/2009/04/13          ------------- ............ ........C. ........................... ...T....... .........A...... ------ .......... 
 130 >A/New Mex/04/2009/04/26        ..........C.. ............ ........C. ........................... ...T....... ................ ...... .......... 
 136 >A/MexCity/004/2009/05/08       .......G..... ........C... ........C. ........................... ...T....... .............G.. ...... .......... 
 140 >A/MexCity/015/2009/05/09       ............. .A.......... ........C. ..A........................ ...T....... ...G............ ...... .......... 

 108 >A/Mex/InDRE13547/2009/04/27    ............. ............ .......... .......A................... A.......... ..T............. ...... .......... 
 114 >A/Mex/4516/2009/04/25          ------------- ------------ ---------- --------------------------- A...A...... ---------------- .....A ---------- 
  15 >A/MexCity/WR1087T/2009/06/19   CA........... ............ .......... ......................T.... A..TA...... ....A...G......C ...... ......GTCT 
 134 >A/Mex/4593/2009/04/20          ------------- ------------ ---------- ........................... ----------- ....A...G....... ------ ---------- 
   2 >A/MexCity/WR1307N/2009/09/14   C...AG...G... ...T........ G.A.A.TT.. TA.A.A....GCCAGT..TT..T.... ATT.A..A.G. ....AT..G.....T. ...C.. ......GTCT 
   3 >A/MexCity/WR1301N/2009/09/12   C...AG...G... ...TG....... G.A.A.TT.. TA.A.A............TT..-ATAG ATT.A..A.G. ....AT..G.....T. ...C.. ......GTCT 
   4 >A/MexCity/63/2009/05/03        ------------- ------------ ---------- ---------.........T...----- ----------- ---------------- ------ ---------- 
   5 >A/MexCity/6/2009/05/01         ------------- ------------ ---------- ---------.........T...----- ----------- ------G.....---- ------ ---------- 
   6 >A/MexCity/37/2009/05/02        ------------- ------------ ---------- ---------.........T...----- ----------- ---------------- ------ ---------- 
   7 >A/MexCity/002/2009/05/08       .........G... ............ .......... ..................T........ A...A...... ....A...G....... ...... .......... 
   8 >A/MexCity/98/2009/05/02        ------------- ------------ ---------- ---------.........T...----- ----------- ---------------- ------ ---------- 
   9 >A/MexCity/003/2009/05/08       ...........G. ............ .......... ..................T........ A...A.A.... ....A...G.T..... ..T... .......... 
  10 >A/MexCity/006/2009/05/09       ...........G. ............ .......... ..................T........ A...A.A.... ....A...G.T..... ..T... ........-- 
  11 >A/MexCity/001/2009/05/07       ............. ............ .......... ..................T........ A...A...... ....A...G.T..... ..T... .......... 
  12 >A/MexCity/011/2009/05/09       ............. ............ .......... ..................T........ A...A...... ..T.A...G......C ...... .......... 
  13 >A/MexCity/012/2009/05/09       ............. ............ .......... ..................T.C...... A...A...... ....A...G......C ...... .....C.... 
  14 >A/Mex/4635/2009/04/20          ............. ............ .......... ..................T........ A...A...... ....A...R......C ...... ---------- 
  16 >A/Mex/4482/2009/04/14          ------------- ............ .......... ..................T........ A...A...... ....A...G....... ....C. .......... 
  17 >A/MexCity/77/2009/05/05        ------------- ------------ ---------- ---------.........T...----- ----------- ---------------- ------ ---------- 
  18 >A/MexCity/46/2009/05/03        ------------- ------------ ---------- ---------.........T...----- ----------- ------G.....---- ------ ---------- 
  19 >A/MexCity/94/2009/05/02        ------------- ------------ ---------- ---------.........T...----- ----------- ---------------- ------ ---------- 
  21 >A/MexCity/86/2009/05/02        ------------- ------------ ---------- ---------.........T...----- ----------- ---------------- ------ ---------- 
  22 >A/MexCity/013/2009/05/09       ............. ............ .......... ..................T........ A...A...... ....A...G....... ...... .......... 
  23 >A/MexCity/76/2009/05/05        ------------- ------------ ---------- ---------.........T...----- ----------- ---------------- ------ ---------- 
  24 >A/Mex/4604/2009/04/19          ............. ............ .......... ..................T........ A...A...... ....A...G....... ...... .......... 
  25 >A/MexCity/96/2009/05/02        ------------- ------------ ---------- ---------.........T...----- ----------- ---------------- ------ ---------- 
  26 >A/MexCity/010/2009/05/09       ............. ............ .......... ..................T........ A...A...... ....A...G......C ...... ........-- 
  27 >A/MexCity/90/2009/05/02        ------------- ------------ ---------- ---------.........T...----- ----------- ---------------- ------ ---------- 
  28 >A/MexCity/18/2009/05/01        ------------- ------------ ---------- ---------.........T...----- ----------- ------G.G...---- ------ ---------- 
  29 >A/Mex/4283/2009/04/15          ------------- ------------ .......... ..................T........ A...A...... ---------------- ------ T......... 
  30 >A/MexCity/31/2009/05/02        ------------- ------------ ---------- ---------.........T...----- ----------- ------G.G...---- ------ ---------- 
  31 >A/MexCity/38/2009/05/02        ------------- ------------ ---------- ---------.........T...----- ----------- ---------------- ------ ---------- 
  32 >A/MexCity/008/2009/05/10       ............. ............ .......... .......A..........T........ AT..A...... ....A...G....... ...... .......... 
  33 >A/MexCity/50/2009/05/03        ------------- ------------ ---------- ---------.........T...----- ----------- ---------------- ------ ---------- 
  34 >A/Mex/4595/2009/04/20          ............. ------------ ---------- ..................T........ A...A...... ....A...G......C ------ T......... 
  35 >A/MexCity/100/2009/05/02       ------------- ------------ ---------- ---------.........T...----- ----------- ---------------- ------ ---------- 
  41 >A/MexCity/97/2009/05/02        ------------- ------------ ---------- ---------.........T...----- ----------- ---------------- ------ ---------- 
  42 >A/MexCity/007/2009/05/09       ............. .....GAC.... .......... ..................T........ A...A...... ....A...G....... ...... .......... 
  43 >A/MexCity/74/2009/05/05        ------------- ------------ ---------- ---------.........T...----- ----------- ---------------- ------ ---------- 
  44 >A/MexCity/71/2009/05/04        ------------- ------------ ---------- ---------.........T...----- ----------- ---------------- ------ ---------- 
  45 >A/MexCity/49/2009/05/03        ------------- ------------ ---------- ---------.........T...----- ----------- ------G.GA..---- ------ ---------- 
  46 >A/MexCity/87/2009/05/02        ------------- ------------ ---------- ---------.........T...----- ----------- ---------------- ------ ---------- 
  47 >A/Mex/4603/2009/04/19          ............. ............ .......... ..................T........ A...A...... ....R...G......C ....C. .......... 
  48 >A/MexCity/42/2009/05/02        ------------- ------------ ---------- ---------.........T...----- ----------- ---------------- ------ ---------- 
  49 >A/MexCity/11/2009/05/01        ------------- ------------ ---------- ---------.........T...----- ----------- ------G.G.T.---- ------ ---------- 
  53 >A/MexCity/47/2009/05/03        ------------- ------------ ---------- --------------------------- ----------- ------G.G.T.---- ------ ---------- 
 117 >A/MexCity/70/2009/05/04        ------------- ------------ ---------- ---------.........T...----- ----------- ------G.G.T.---- ------ ---------- 
 118 >A/MexCity/13/2009/05/01        ------------- ------------ ---------- ---------.........T...----- ----------- ------G.G.T.---- ------ ---------- 
 119 >A/MexCity/15/2009/05/01        ------------- ------------ ---------- --------------------------- ----------- ------G.G.T.---- ------ ---------- 
  50 >A/MexCity/79/2009/05/05        ------------- ------------ ---------- ---------.........T...----- ----------- ---------------- ------ ---------- 
  51 >A/Mex/InDRE13551/2009/04/28    ............. ............ ......A... ..................T........ A...A...... ....A...G....... ...... .......... 
  52 >A/MexCity/41/2009/05/02        ------------- ------------ ---------- ---------.........T...----- ----------- ---------------- ------ ---------- 
  54 >A/MexCity/60/2009/05/03        ------------- ------------ ---------- ---------.........T.C.----- ----------- ---------------- ------ ---------- 
  64 >A/MexCity/106/2009/05/05       ------------- ------------ ---------- --------------------------- ----------- ------G.....---- ------ ---------- 
  65 >A/Mex/4502/2009/04/17          ------------- ............ ---------- ..................T........ ----------- ---------------- ------ ---------- 
  66 >A/Mex/4575/2009/04/20          ------------- ------------ ---------- ..................T........ ----------- ....A...G....... ------ ---------- 
  67 >A/Mex/InDRE13555/2009/04/29    ............. .....GAC.... .......... ..................T........ A...A...... ....A...G....... ...... .......... 
  68 >A/MexCity/81/2009/05/05        ------------- ------------ ---------- ---------.........T...----- ----------- ---------------- ------ ---------- 
  69 >A/MexCity/40/2009/05/02        ------------- ------------ ---------- ---------.........T...----- ----------- ------G.G...---- ------ ---------- 
  70 >A/MexCity/99/2009/05/02        ------------- ------------ ---------- ---------.........T...----- ----------- ---------------- ------ ---------- 
  71 >A/MexCity/67/2009/05/05        ------------- ------------ ---------- ---------.........T...----- ----------- ------G..A..---- ------ ---------- 
  72 >A/MexCity/78/2009/05/05        ------------- ------------ ---------- ---------.........T...----- ----------- ---------------- ------ ---------- 
  73 >A/MexCity/39/2009/05/02        ------------- ------------ ---------- ---------.........T...----- ----------- ------G.G...---- ------ ---------- 
  74 >A/MexCity/4/2009/05/01         ------------- ------------ ---------- ---------.........T...----- ----------- ------G.G...---- ------ ---------- 
  75 >A/MexCity/64/2009/05/03        ------------- ------------ ---------- ---------.........T...----- ----------- ------G.G...---- ------ ---------- 
  76 >A/MexCity/48/2009/05/03        ------------- ------------ ---------- ---------.........T...----- ----------- ------G.G...---- ------ ---------- 
  77 >A/MexCity/61/2009/05/03        ------------- ------------ ---------- ---------.........T...----- ----------- ------G.G...---- ------ ---------- 
  78 >A/MexCity/65/2009/05/05        ------------- ------------ ---------- ---------.........T...----- ----------- ------G.G...---- ------ ---------- 
  79 >A/MexCity/69/2009/05/04        ------------- ------------ ---------- ---------.........T...----- ----------- ------G.G...---- ------ ---------- 
  80 >A/MexCity/73/2009/05/04        ------------- ------------ ---------- ---------.........T...----- ----------- ------G.G...---- ------ ---------- 
  81 >A/MexCity/105/2009/05/04       ------------- ------------ ---------- ---------.........T...----- ----------- ------G.G...---- ------ ---------- 
  83 >A/MexCity/26/2009/05/02        ------------- ------------ ---------- ---------.........T...----- ----------- ------G.G...---- ------ ---------- 
  84 >A/MexCity/57/2009/05/03        ------------- ------------ ---------- ---------.........T...----- ----------- ------G.G...---- ------ ---------- 
  85 >A/MexCity/53/2009/05/03        ------------- ------------ ---------- ---------.........T...----- ----------- ------G.G...---- ------ ---------- 
  86 >A/MexCity/92/2009/05/02        ------------- ------------ ---------- ---------.........T...----- ----------- ---------------- ------ ---------- 
  87 >A/MexCity/55/2009/05/03        ------------- ------------ ---------- ---------.........T...----- ----------- ------G.G...---- ------ ---------- 
  88 >A/MexCity/16/2009/05/01        ------------- ------------ ---------- ---------.........T...----- ----------- ------G.G...---- ------ ---------- 
  89 >A/MexCity/58/2009/05/03        ------------- ------------ ---------- ---------.........T...----- ----------- ------G.G...---- ------ ---------- 
  90 >A/MexCity/17/2009/05/01        ------------- ------------ ---------- ---------.........T...----- ----------- ------G.G...---- ------ ---------- 
  91 >A/MexCity/5/2009/05/01         ------------- ------------ ---------- ---------.........T...----- ----------- ------G.G...---- ------ ---------- 

  20 >A/MexCity/WR1100N/2009/06/29   CA..........A ............ .......... ......A...........T........ A...AA..... ....A...G....... AA.... ..G...GTCT 
  82 >A/MexCity/WR1306N/2009/09/02   C....G......A ............ .........T ......A...........T...-ATAG A...AA..... ....A...G....... AA.... ..G..CGTCT 
  36 >A/MexCity/WR1308T/2009/09/04   C....GG.G...A G.AT....G..C .T...C.... ......A...........T........ A...AA....T ....A...G...A... AA.... .GGTA.GTCT 
  37 >A/MexCity/WR1297N/2009/09/03   CA...GG.G...A G.ATG...GT.C .T...C.... ......A...GCCAGT..T...T.... A...AA....T ....A...G...A... AA.... .GGTA.GTCT 
  38 >A/MexCity/WR1311T/2009/09/10   C.....G.G...A G..TG...GT.C .T...C.... ......A...GCCAGT..T...T.... A...AA..A.T .C..A...G...A... AA.... .GGTA.GTCT 
  39 >A/MexCity/WR1310N/2009/09/09   C.....G.G...A G.......GT.C .T...C.... ......A...GCCAGT..T...G.... A...AA..A.T .C..A...G...A... AA.... .GGTA.GTCT 
  40 >A/MexCity/WR1312N/2009/09/10   C.....G.G...A G..T....GT.C .T...C.... ......A...........T...T.... A...AA..A.T .C..A...G...A... AA.... .GGTA.GTCT 

 164 >A/Cancun-NY/Index/2009/04/15   ............A ............ .......... ......A...........T........ A...AA..... ....A...G....... AA.... ..G....... 
                                                                                                                                                      
---Index-----------------------------GGAGGAAAAATAG AGGCTAGTTCCT ACCCGTGAAC AGCGTCTGAGCAGTAGGCCCTGATCTA GCCCGGGGGCC GTCAGCACAGCAGACA GGCTTG CAACGTTATA 
-codon-position----------------------2 2   12  12   1 1    22   1  1   11   112 2122 2 12 11 1   1 12  1 12  2  1  12211  11   2       11    11112121 
                                     0000011111222 000000011112 0000111111 000000000111111111111111111 00011111111 0000000000011111 000000 0000000000 
                                     1125823567011 358888927992 0478034677 011122667122222233446666666 24911222334 2222345577900233 466789 1136778888 
                                     1144718771236 673458516594 3842900849 404616561722223335050467778 92414489553 4458114748549322 909613 5864243444 
                                     0456981743323 617452720551 7013851114 565766856367890109852497890 86383893674 7873640126447039 206073 3973489124

gsgs · Aug 18, 2010

Re: swine flu sequences (thread from h5n1experts)

-------------posted:2010/01/03-------------

amino-acids 134-138,153-155,184-196,216-230
in H3 enumeration , add 14 for H1-enumeration

RBDs of mxh6p with counts:

Code:

................x................x.....   positions 190 and 225 marked with "x"
GVTAA WLV HPSTSADQQSLYQ EIAIRPKVRDQEGRM,1542
GVTAA WLV HPSTSADQQSLYQ EIAIRPKVREQEGRM,82
GVTAA WLV HPSTSADQQSLYQ EIAIRPKVRGQEGRM,17
GVTAA WLV HPSTNADQQSLYQ EIAIRPKVRDQEGRM,13
GVTAA WLV HPSTSADQQSLYQ EIAIRPKVRDPEGRM,13
GVTAA WLV HPSTSADQQSLYQ EIAIRPKVRDREGRM,11
GITAA WLV HPSTSADQQSLYQ EIAIRPKVRDQEGRM,8
GVTAA WLV HPSTSADQQSLYQ EIAIRPKVR-QEGRM,8
GVTTA WLV HPSTSADQQSLYQ EIAIRPKVRDQEGRM,7
----- WLV HPSTSADQQSLYQ EIAIRPKVRDQEGRM,6
----- --- HPSTSADQQSLYQ EIAIRPKVR------,5
GVTAA WLV HPSTSADQQSIYQ EIAIRPKVRDQEGRM,5
GVTAA WLV HPSTSADQQSLYQ EIAIRPKVRNQEGRM,5
----- --- ------------- EIAIRPKVRDQEGRM,4
GVTAA WLV HPSTSADQQSLYQ ---------------,4
GVTAA WLI HPSTSADQQSLYQ EIAIRPKVRDQEGRM,3
GVTAA WLV ------------- ---------------,3
GVTAA WLV HPRTSADQQSLYQ EIAIRPKVRDQEGRM,3
GVTAA WLV HPSTSADQQSQYQ EIAIRPKVRDQEGRM,3
...

RBDs of h1x with counts:

Code:

................x................x.....
GVSAS WLT HPPNIGDQRALYH EIAKRPKVRDQEGRI,1103
GVSAS WLT HPPNIGDQKALYH EIAKRPKVRDQEGRI,519
GVSAS WLT HPPNIGDQMTLYH EIAKRPKVRDQEGRI,194
GVSAS WLT HPPNIGNQRALYH EIAKRPKVRDQEGRI,118
GVTAS WLT HPSNIGDQRAIYH EIAKRPKVRDQEGRI,79
GVTAA WLV HPPTSTDQQSLYQ EIAARPKVRGQAGRM,77
GVSAS WLT HPPNIVPQKTLYR EIAKRPKVRDQEGRI,49
GVTAA WLV HPSTSADQQSLYQ EIATRPKVRDQAGRM,47
GVSAS WLT HPPNIGDQRTLYH EITKRPKVRDQEGRI,45
GVTAS WLT HPSNIEDQKTIYR EIAKRPKVRNQEGRI,45
GVSAS WLT HPPNIGNQKALYH EIAKRPKVRDQEGRI,43
GVSAS WLT HPPNIVDQKTLYR EIAKRPKVRDQEGRI,41
GVSAS WLT HPPNIVNQKTLYR EIAKRPKVRDQEGRI,33
GVSAS WLT HPPNIADQKTLYH EIAKRPKVRDQEGRI,32
----- --- ------------- ---------------,30
GVSAS WLT HPPNIGDQRALYH ---------------,30
GVTAS WLT HPSNIGDQRAIYH ---------------,25
GVTAA WLV HPPTSTDQQSLYQ EIATRPKVRGQAGRM,24
GVSAS WLT HPPSINDQKTLYH EIAKRPKVRDQEGRI,22
GVTAS WLT HPSNIGDQRAIYH EIAKRPKVRGQEGRI,21
GVSAS WLT HPPNIGVQRALYH EIAKRPKVRDQEGRI,20
GVSAS WLT HPPNIENQRTLYH EITKRPKVRDQEGRI,19
GVTAS WLT HPSNIEDQKTIYR EIAERPKVRGQAGRI,19
GVSAS WLT HPPNIGPQKALYH EIAKRPKVRDQEGRI,18
GVSAS WLT HPPNIGPQRALYH EIAKRPKVRDQEGRI,18
GVSAS WLT HPPNIGDQKTLYH EIAKRPKVRDQEGRI,17
GVSAS WLT HPPNIGNQRTLYH EITKRPKVRDQEGRI,17
GVSAS WLT NPPNIGDQKALYH EIAKRPKVRDQEGRI,17
GVTAS WLT HPSNMGDQRAIYH EIAKRPKVRDQEGRI,17
GVSAS WLT HPPNIGDQRAL-- ---------------,16
GVSAS WLT HPPN--------- ---------------,14
GVSAS WLT HPPNIGVQKALYH EIAKRPKVRDQEGRI,14
GVSAS WLT HPPNINDQKALYH EIAKRPKVRDQEGRI,14
GVTAS WLT HPSNMGDQRAIYH EIARRPKVRDQEGRI,14
GVSAS WLT HPPSISDQKTLYH EIAKRPKVRDQEGRI,13
GVTAA WLV HPPTSTDQQTLYQ EIAARPKVRDQAGRM,13
GVSAS WLT HPPNIGDQRALYH EIAKRPKVRNQEGRI,11
GVSAS WLT HPPNIGNQMTLYH EIAKRPKVRDQEGRI,11
GVSAS WLT HPPNIGDQNTLYH EIAKRPKVRDQEGRI,10
GVSAS WLT HPPNIGGQKALYH EIAKRPKVRDQEGRI,9
GVTAA WLI HPSTSADQQSLYQ EIATRPKVRDQAGRM,9
GVTAS WLT HPSNIEDQKTIYR EIAKRPKVRDQEGRI,9
GVSAS WLT HPPNIGAQKALYH EIAKRPKVRDQEGRI,8
GVSAS WLT HPPNIGNQRTLYN EIAKRPKVRDQEGRI,8
GVTAS WLT HPSNIGDQRAIYH EITKRPKVRDQEGRI,8
GVTAS WLT HPSNIRDQRAIYH EIAKRPKVRDQEGRI,8
GVSAS WLT HPPNIGDQRTLYN EIAKRPKVRDQEGRI,7
GVSAS WLT HPPSISDQKTLYH EVAKRPKVRDQEGRI,7
GVSAS WLT HPSNIGVQRAIYH EIAKRPKVRGQEGRI,7
GVTAA WLT HPPNSKEQQNLYQ EIAERPKVRDQAGRM,7
GVTAA WLV HPPTSNDQQSLYQ EIAARPKVRGQAGRM,7
GVTAS WLT HPSNIEDQKTIYR EIAKRPKVRGQEGRI,7
GVSAS WLT HPPNIANQKTLYH EIAKRPKVRDQEGRI,6
GVSAS WLT HPPNIGDQRALYH EIAKRPKVRGQEGRI,6
GVSAS WLT HPPNIGDQRTLYY EIAKRPKVRDQEGRI,6
GVSAS WLT HPPNIRDQRALYH EIAKRPKVRDQEGRI,6
GVSAS WLT HPPTIGDQSTLYH EIAKRPKVRDQEGRI,6
GVTAA WLT HPSNIEDQKTLYR EIAERPKVRGQAGRI,6
GVTAA WLV HPPTSADQQSLYQ EIATRPKVRDQAGRM,6
GVTSA WLV HPPTSTDQQSLYQ EIATRPKVRGQAGRM,6
GGSAS WLT HPPNIGDQRALYH EIAKRPKVRDQEGRI,5
GVSAS WLT HPPDIGPQKTLYH EIAKRPKVRDQEGRI,5
GVSAS WLT HPPNIAPQKTLYH EIAKRPKVRDQEGRI,5
GVSAS WLT HPPNIGDQRALYH EIAKRPKVRDREGRI,5
GVSAS WLT HPPNIGVQMTLYH EIAKRPKVRDQEGRI,5
GVSAS WLT HPPSISNQKTLYH EVAKRPKVRDQEGRI,5
GVSAS WLT HPSNIGDQRAIYH EIAKRPKVRDQEGRI,5
GVTAA WLT HPSNIKDQQTLYQ EIAERPKVRGQAGRM,5
GVTAA WLV HPPTSTDQQSLYQ EIASRPKVRGQAGRM,5
GVTAA WLV HPSTSADQQSLYQ EIAIRPKVRDQEGRM,5
GVSAS WLT HPPDIGNQKTLYH EIAKRPKVRDQEGRI,4
GVSAS WLT HPPNIGDQKALYH EIAKRPKVRGQEGRI,4
GVSAS WLT HPPNIGDQRALYH EITKRPKVRDQEGRI,4
GVSAS WLT HPPNIGNQKTLYH EIAKRPKVRDQEGRI,4
GVSAS WLT HPPNIGPQMTLYH EIAKRPKVRDQEGRI,4
GVSAS WLT HPSNIGDQRALYH EIAKRPKVRDQEGRI,4
GVSAS WLT HPSNIGVQRAIYH EIAKRPKVRDQEGRI,4
GVTAA WLT HPSNIGDQRAIYH EIAKRPKVRGQEGRI,4
GVTAA WLT HPSNSKDQQNIYQ EIAERPKVRDQAGRM,4
GVTAA WLV HPPTSADQQSLYQ EIATRPKVRNQAGRM,4
GVTAS WLT HPSNIGDQRAIYH EIAKRPKVRNQEGRI,4
GVTAS WLT HPSNIRDQRAIYH EIAKRPKVRGQEGRI,4
...

gsgs · Aug 18, 2010

Re: swine flu sequences (thread from h5n1experts)

---------------posted:2010/03/14-------------------

[11] Nelson M, Spiro D, Wentworth D, Beck E, Fan J, et al. (2009) The early diversification of Influenza A/H1N1pdm. PLoS Currents Influenza

http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2773564/?tool=pubmed

amino-acid markers:
1:S224P*(PA),S100P*(HA),A214T*(HA),V338I*(HA),
2:M581L*(PA),T373I(NP)
3:
4:V649I*(PB2),I667T(PB1),V100I(NP),V106I(NA),E63K(NS2)
5:V100I*(NP),V106I*(NA),N248D(NA)
6:K2E(HA),Q310H*(HA),V100I(NP),V106I(NA),N248D(NA)
7:S220T(HA),V100I*(NP),V106I(NA),N248D*(NA),I123V(NS1)

3 must be my "original Meico"
7 must be my "Cancun"
2 must be my "Northern"
1 must be my "early USA"
4 must be my "Japan"
5 must be my "pre-Cancun"
6 must be my "Wisconsin" (?)

(where is my airplane-SC-Cancun2 ?)

7 substrains H1N1, India study:
http://www.flutrackers.com/forum/showthread.php?p=346828#post346828

* Clade 1 included amongst others the California/04/2009 and California/07/2009 isolates

* Clade 2 included isolates from Mexico, California, Canada, France, Germany, Netherlands, China and multiple US states

* clade 3 - France, England, Russia, China, Canada, Mexico and the US states;

* clade 4?two east Asian countries, Korea and Japan;

* clade 5?Canada, China, Japan, the USA (mainly Wisconsin isolates) with an addition of Thailand and

*clade 6?Canada, Italy, China, Japan with new additions of Germany, Taiwan, Thailand and few US states.

* clade 7 which was the largest clade included isolates from Canada, China, Japan, Germany, Italy, Luxembourg, Russia and several states of the USA with Taiwan, Denmark, Singapore, Malaysia, Central and South America getting added.

sharon sanders · Aug 20, 2010

Re: swine flu sequences (thread from h5n1experts)

Thank you Gsgs for also posting these on FluTrackers.

swine flu sequences (thread from h5n1experts)

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