gsgs
Registered User
other than on the nucleotide-level,
the similarity on the amino-level seems to be quite common.
It shows that influenza-variability is limited, I remember a paper
on this discussed here some months ago.
viruses close to Brevig/1918 on the protein level:
gene:
differences in %
common aligned amino-acids
differences in amino-acids
virus
or, as another example, viruses similar to
A/Indonesia/5/2005(H5N1)
on the protein-level :
the similarity on the amino-level seems to be quite common.
It shows that influenza-variability is limited, I remember a paper
on this discussed here some months ago.
viruses close to Brevig/1918 on the protein level:
gene:
differences in %
common aligned amino-acids
differences in amino-acids
virus
Code:
PB2: 0.69% 433 3 A/mallard/Alberta/226/1998H2N3
PB1: 0.27% 373 1 A/pintail/Alberta/22/1997H2N9
PA : 0.43% 231 1 A/Dk/South Africa/811/2004H5N1
NP : 1.22% 245 3 A/mallard/Alberta/47/1998H4N1or, as another example, viruses similar to
A/Indonesia/5/2005(H5N1)
on the protein-level :
Code:
PB2: 0.37% 270 1 A/mallard/Alberta/30/1998H4N6
PB1: 0.39% 256 1 A/finch/Canada/NS1301/2001H3N8
0.00% 250 0 A/Dk/S.Africa/1108/2004H3N8
PA : 1.67% 717 12 A/Dk/Nanchang/1749/1992H11N2
NP : 0.83% 240 2 A/mallard/Alberta/119/2000H4N6
0.76% 263 2 A/teal/Alberta/16/1997H2N9