Russia - 1 new outbreak of highly pathogenic avian influenza H5N2 in birds in farm, Kostromskaya Oblast (OIE, August 16, 2018)

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[TD="width: *, align: left"] Highly pathogenic avian influenza,
Russia
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[TD="class: topbigtabletitle27"]Information received on 16/08/2018 from Dr Nikolay Vlasov, Deputy Head of the Rosselkhoznadzor, Ministry of Agriculture, Ministry of Agriculture, Moscow, Russia[/TD]
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[TD] Summary
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[TD="class: filtrer_th, width: 10%"]Report type[/TD]
[TD="width: 30%"]Immediate notification[/TD]
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[TD="class: filtrer_th, width: 10%"]Date of start of the event[/TD]
[TD="width: 30%"]09/08/2018[/TD]
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[TD="class: filtrer_th, width: 10%"]Date of confirmation of the event[/TD]
[TD="width: 30%"]11/08/2018[/TD]
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[TD="class: filtrer_th, width: 10%"]Report date[/TD]
[TD="width: 30%"]16/08/2018[/TD]
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[TD="class: filtrer_th, width: 10%"]Date submitted to OIE[/TD]
[TD="width: 30%"]16/08/2018[/TD]
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[TD="class: filtrer_th, width: 10%"]Reason for notification[/TD]
[TD="width: 30%"]Recurrence of a listed disease[/TD]
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[TD="class: filtrer_th, width: 10%"]Date of previous occurrence[/TD]
[TD="width: 30%"]13/03/2018[/TD]
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[TD="class: filtrer_th, width: 10%"]Manifestation of disease[/TD]
[TD="width: 30%"]Clinical disease[/TD]
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[TD="class: filtrer_th, width: 10%"]Causal agent[/TD]
[TD="width: 30%"]Highly pathogenic avian influenza virus[/TD]
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[TD="class: filtrer_th, width: 10%"]Serotype[/TD]
[TD="width: 30%"]H5N2[/TD]
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[TD="class: filtrer_th, width: 10%"]Nature of diagnosis[/TD]
[TD="width: 30%"]Clinical, Laboratory (advanced)[/TD]
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[TD="class: filtrer_th, width: 10%"]This event pertains to[/TD]
[TD="width: 30%"]a defined zone within the country[/TD]
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[TD] New outbreaks (1)
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[TD="class: filtrer_th ta_left, align: left"]Outbreak 1[/TD]
[TD="class: filtrer_th ta_left"]Harino, Kostromskoy, Kostromskaya Oblast[/TD]
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[TD="class: filtrer_th ta_left"]Date of start of the outbreak[/TD]
[TD]09/08/2018[/TD]
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[TD="class: filtrer_th ta_left"]Outbreak status[/TD]
[TD]Continuing (or date resolved not provided)[/TD]
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[TD="class: filtrer_th ta_left"]Epidemiological unit[/TD]
[TD]Farm[/TD]
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[TD="class: filtrer_th ta_left"]Affected animals[/TD]
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[TD="class: filtrer_th ta_center last"]Species[/TD]
[TD="class: filtrer_th ta_center last"]Susceptible[/TD]
[TD="class: filtrer_th ta_center last"]Cases[/TD]
[TD="class: filtrer_th ta_center last"]Deaths[/TD]
[TD="class: filtrer_th ta_center last"]Killed and disposed of[/TD]
[TD="class: filtrer_th ta_center last"]Slaughtered[/TD]
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[TD]Birds[/TD]
[TD="class: ta_right"]498485[/TD]
[TD="class: ta_right"]506[/TD]
[TD="class: ta_right"]506[/TD]
[TD="class: ta_right"]1223[/TD]
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[TD="class: filtrer_th ta_left, align: left"]Summary of outbreaks[/TD]
[TD="class: filtrer_th ta_left"]Total outbreaks: 1[/TD]
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[TD="class: filtrer_th ta_left"]Total animals affected[/TD]
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[TD="class: filtrer_th ta_center last"]Species[/TD]
[TD="class: filtrer_th ta_center last"]Susceptible[/TD]
[TD="class: filtrer_th ta_center last"]Cases[/TD]
[TD="class: filtrer_th ta_center last"]Deaths[/TD]
[TD="class: filtrer_th ta_center last"]Killed and disposed of[/TD]
[TD="class: filtrer_th ta_center last"]Slaughtered[/TD]
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[TD]Birds[/TD]
[TD="class: ta_right"]498485[/TD]
[TD="class: ta_right"]506[/TD]
[TD="class: ta_right"]506[/TD]
[TD="class: ta_right"]1223[/TD]
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[TD="class: filtrer_th ta_left"]Outbreak statistics[/TD]
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[TD="class: filtrer_th ta_center last"]Species[/TD]
[TD="class: filtrer_th ta_center last"]Apparent morbidity rate[/TD]
[TD="class: filtrer_th ta_center last"]Apparent mortality rate[/TD]
[TD="class: filtrer_th ta_center last"]Apparent case fatality rate[/TD]
[TD="class: filtrer_th ta_center last"]Proportion susceptible animals lost*[/TD]
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[TD]Birds[/TD]
[TD="class: ta_right"]0.10%[/TD]
[TD="class: ta_right"]0.10%[/TD]
[TD="class: ta_right"]100.00%[/TD]
[TD="class: ta_right"]**[/TD]
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[TD="class: filtrer_th ta_left, colspan: 2"]*Removed from the susceptible population through death, destruction and/or slaughter[/TD]
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[TD="class: filtrer_th ta_left, colspan: 2"]**Not calculated because of missing information[/TD]
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[TD] Epidemiology
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[TD="class: filtrer_th ta_left"]Source of the outbreak(s) or origin of infection[/TD]
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• Unknown or inconclusive

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[TD="class: filtrer_th ta_left"]Epidemiological comments[/TD]
[TD]The virus isolate was identified as H5N2 subtype by PCR and nucleotide sequencing. The comparative analysis of the obtained nucleotide sequences of the H gene and N gene fragments revealed that the isolate belongs to the Asian genetic lineage of highly pathogenic avian influenza (Clade 2.3.4.4.) which spread in the Russian Federation as well as in Asian, European, Middle Eastern and African countries in 2016-2018. The hemagglutinin cleavage site has a ?REKRRKRGLF- structure, characterizing the virus as potentially highly virulent.[/TD]
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[TD] Control measures
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[TD="class: filtrer_th ta_left"]Measures applied[/TD]
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• Movement control inside the country
• Surveillance within containment and/or protection zone
• Screening
• Quarantine
• Official disposal of carcasses, by-products and waste
• Stamping out
• Control of wildlife reservoirs
• Disinfection
• Vaccination prohibited
• No treatment of affected animals

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[TD="class: filtrer_th ta_left"]Measures to be applied[/TD]
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• No other measures

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[TD] Diagnostic test results
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[TD="class: filtrer_th ta_left"]Laboratory name and type[/TD]
[TD="class: filtrer_th ta_left"]Species[/TD]
[TD="class: filtrer_th ta_left"]Test[/TD]
[TD="class: filtrer_th ta_left"]Test date[/TD]
[TD="class: filtrer_th ta_left last"]Result[/TD]
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[TD="class: filtrer"]All-Russian Research Institute for Animal Health (OIE Reference Laboratory)[/TD]
[TD="class: filtrer"]Birds[/TD]
[TD="class: filtrer"]reverse transcription - polymerase chain reaction (RT-PCR)[/TD]
[TD="class: filtrer"]11/08/2018[/TD]
[TD="class: filtrer cb-centree last"]Positive[/TD]
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[TD] Future Reporting
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[TD="class: filtrer"]The event is continuing. Weekly follow-up reports will be submitted.[/TD]
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http://www.oie.int/wahis_2/public/w...?page_refer=MapFullEventReport&reportid=27576