Russia - 1 new outbreak of highly pathogenic avian influenza H5 in wild birds in the surroundings of Ubsu-Nur Lake (OIE, June 17, 2016)

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[TD="width: *, align: left"] Highly pathogenic avian influenza,
Russia
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[TD="class: topbigtabletitle27"]Information received on 17/06/2016 from Dr Evgeny Nepoklonov, Deputy Head, Federal Service for Veterinary and Phytosanitary Surveillance, Ministry of Agriculture, Moscow, Russia[/TD]
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[TD] Summary
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[TD="class: filtrer_th, width: 10%"]Report type[/TD]
[TD="width: 30%"]Immediate notification[/TD]
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[TD="class: filtrer_th, width: 10%"]Date of start of the event[/TD]
[TD="width: 30%"]09/06/2016[/TD]
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[TD="class: filtrer_th, width: 10%"]Date of confirmation of the event[/TD]
[TD="width: 30%"]09/06/2016[/TD]
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[TD="class: filtrer_th, width: 10%"]Report date[/TD]
[TD="width: 30%"]17/06/2016[/TD]
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[TD="class: filtrer_th, width: 10%"]Date submitted to OIE[/TD]
[TD="width: 30%"]17/06/2016[/TD]
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[TD="class: filtrer_th, width: 10%"]Reason for notification[/TD]
[TD="width: 30%"]Reoccurrence of a listed disease[/TD]
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[TD="class: filtrer_th, width: 10%"]Date of previous occurrence[/TD]
[TD="width: 30%"]06/08/2015[/TD]
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[TD="class: filtrer_th, width: 10%"]Manifestation of disease[/TD]
[TD="width: 30%"]Sub-clinical infection[/TD]
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[TD="class: filtrer_th, width: 10%"]Causal agent[/TD]
[TD="width: 30%"]Highly pathogenic avian influenza virus[/TD]
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[TD="class: filtrer_th, width: 10%"]Serotype[/TD]
[TD="width: 30%"]H5[/TD]
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[TD="class: filtrer_th, width: 10%"]Nature of diagnosis[/TD]
[TD="width: 30%"]Laboratory (basic), Laboratory (advanced)[/TD]
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[TD="class: filtrer_th, width: 10%"]This event pertains to[/TD]
[TD="width: 30%"]a defined zone within the country[/TD]
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[TD] New outbreaks (1)
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[TD="class: filtrer_th ta_left, align: left"]Outbreak 1[/TD]
[TD="class: filtrer_th ta_left"]Ubsu-Nur, Ovyursky, RESPUBLIKA TYVA[/TD]
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[TD="class: filtrer_th ta_left"]Date of start of the outbreak[/TD]
[TD]09/06/2016[/TD]
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[TD="class: filtrer_th ta_left"]Outbreak status[/TD]
[TD]Resolved (15/06/2016)[/TD]
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[TD="class: filtrer_th ta_left"]Epidemiological unit[/TD]
[TD]Not applicable[/TD]
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[TD="class: filtrer_th ta_left"]Affected animals[/TD]
[TD] [TABLE="class: TableFoyers, width: 700"]
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[TD="class: filtrer_th ta_center last"]Species[/TD]
[TD="class: filtrer_th ta_center last"]Susceptible[/TD]
[TD="class: filtrer_th ta_center last"]Cases[/TD]
[TD="class: filtrer_th ta_center last"]Deaths[/TD]
[TD="class: filtrer_th ta_center last"]Destroyed[/TD]
[TD="class: filtrer_th ta_center last"]Slaughtered[/TD]
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[TD]Grey Heron:Ardea cinerea(Ardeidae)[/TD]
[TD="class: ta_right"] [/TD]
[TD="class: ta_right"]4[/TD]
[TD="class: ta_right"]0[/TD]
[TD="class: ta_right"]4[/TD]
[TD="class: ta_right"]0[/TD]
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[TD]Great Crested Grebeodiceps cristatus(Podicipedidae)[/TD]
[TD="class: ta_right"] [/TD]
[TD="class: ta_right"]1[/TD]
[TD="class: ta_right"]0[/TD]
[TD="class: ta_right"]1[/TD]
[TD="class: ta_right"]0[/TD]
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[TD]Black-headed Gull:Larus ridibundus(Laridae)[/TD]
[TD="class: ta_right"] [/TD]
[TD="class: ta_right"]6[/TD]
[TD="class: ta_right"]0[/TD]
[TD="class: ta_right"]6[/TD]
[TD="class: ta_right"]0[/TD]
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[TD]Common Tern:Sterna hirundo(Laridae)[/TD]
[TD="class: ta_right"] [/TD]
[TD="class: ta_right"]1[/TD]
[TD="class: ta_right"]0[/TD]
[TD="class: ta_right"]1[/TD]
[TD="class: ta_right"]0[/TD]
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[TD]Great Cormoranthalacrocorax carbo(Phalacrocoracidae)[/TD]
[TD="class: ta_right"] [/TD]
[TD="class: ta_right"]4[/TD]
[TD="class: ta_right"]0[/TD]
[TD="class: ta_right"]4[/TD]
[TD="class: ta_right"]0[/TD]
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[TD]Anatidae (unidentified):Anatidae (incognita)(Anatidae)[/TD]
[TD="class: ta_right"] [/TD]
[TD="class: ta_right"]1[/TD]
[TD="class: ta_right"]0[/TD]
[TD="class: ta_right"]1[/TD]
[TD="class: ta_right"]0[/TD]
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[TD="class: filtrer_th ta_left, align: left"]Summary of outbreaks[/TD]
[TD="class: filtrer_th ta_left"]Total outbreaks: 1[/TD]
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[TD="class: filtrer_th ta_left"]Total animals affected[/TD]
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[TD="class: filtrer_th ta_center last"]Species[/TD]
[TD="class: filtrer_th ta_center last"]Susceptible[/TD]
[TD="class: filtrer_th ta_center last"]Cases[/TD]
[TD="class: filtrer_th ta_center last"]Deaths[/TD]
[TD="class: filtrer_th ta_center last"]Destroyed[/TD]
[TD="class: filtrer_th ta_center last"]Slaughtered[/TD]
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[TD]Grey Heron:Ardea cinerea(Ardeidae)[/TD]
[TD="class: ta_right"] [/TD]
[TD="class: ta_right"]4[/TD]
[TD="class: ta_right"]0[/TD]
[TD="class: ta_right"]4[/TD]
[TD="class: ta_right"]0[/TD]
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[TD]Great Crested Grebeodiceps cristatus(Podicipedidae)[/TD]
[TD="class: ta_right"] [/TD]
[TD="class: ta_right"]1[/TD]
[TD="class: ta_right"]0[/TD]
[TD="class: ta_right"]1[/TD]
[TD="class: ta_right"]0[/TD]
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[TD]Black-headed Gull:Larus ridibundus(Laridae)[/TD]
[TD="class: ta_right"] [/TD]
[TD="class: ta_right"]6[/TD]
[TD="class: ta_right"]0[/TD]
[TD="class: ta_right"]6[/TD]
[TD="class: ta_right"]0[/TD]
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[TD]Common Tern:Sterna hirundo(Laridae)[/TD]
[TD="class: ta_right"] [/TD]
[TD="class: ta_right"]1[/TD]
[TD="class: ta_right"]0[/TD]
[TD="class: ta_right"]1[/TD]
[TD="class: ta_right"]0[/TD]
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[TD]Great Cormoranthalacrocorax carbo(Phalacrocoracidae)[/TD]
[TD="class: ta_right"] [/TD]
[TD="class: ta_right"]4[/TD]
[TD="class: ta_right"]0[/TD]
[TD="class: ta_right"]4[/TD]
[TD="class: ta_right"]0[/TD]
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[TD]Anatidae (unidentified):Anatidae (incognita)(Anatidae)[/TD]
[TD="class: ta_right"] [/TD]
[TD="class: ta_right"]1[/TD]
[TD="class: ta_right"]0[/TD]
[TD="class: ta_right"]1[/TD]
[TD="class: ta_right"]0[/TD]
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[TD="class: filtrer_th ta_left"]Outbreak statistics[/TD]
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[TD="class: filtrer_th ta_center last"]Species[/TD]
[TD="class: filtrer_th ta_center last"]Apparent morbidity rate[/TD]
[TD="class: filtrer_th ta_center last"]Apparent mortality rate[/TD]
[TD="class: filtrer_th ta_center last"]Apparent case fatality rate[/TD]
[TD="class: filtrer_th ta_center last"]Proportion susceptible animals lost*[/TD]
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[TD]Grey Heron:Ardea cinerea(Ardeidae)[/TD]
[TD="class: ta_right"]**[/TD]
[TD="class: ta_right"]**[/TD]
[TD="class: ta_right"]0.00%[/TD]
[TD="class: ta_right"]**[/TD]
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[TD]Great Crested Grebeodiceps cristatus(Podicipedidae)[/TD]
[TD="class: ta_right"]**[/TD]
[TD="class: ta_right"]**[/TD]
[TD="class: ta_right"]0.00%[/TD]
[TD="class: ta_right"]**[/TD]
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[TD]Black-headed Gull:Larus ridibundus(Laridae)[/TD]
[TD="class: ta_right"]**[/TD]
[TD="class: ta_right"]**[/TD]
[TD="class: ta_right"]0.00%[/TD]
[TD="class: ta_right"]**[/TD]
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[TD]Common Tern:Sterna hirundo(Laridae)[/TD]
[TD="class: ta_right"]**[/TD]
[TD="class: ta_right"]**[/TD]
[TD="class: ta_right"]0.00%[/TD]
[TD="class: ta_right"]**[/TD]
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[TD]Great Cormoranthalacrocorax carbo(Phalacrocoracidae)[/TD]
[TD="class: ta_right"]**[/TD]
[TD="class: ta_right"]**[/TD]
[TD="class: ta_right"]0.00%[/TD]
[TD="class: ta_right"]**[/TD]
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[TD]Anatidae (unidentified):Anatidae (incognita)(Anatidae)[/TD]
[TD="class: ta_right"]**[/TD]
[TD="class: ta_right"]**[/TD]
[TD="class: ta_right"]0.00%[/TD]
[TD="class: ta_right"]**[/TD]
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[TD="class: filtrer_th ta_left, colspan: 2"]*Removed from the susceptible population through death, destruction and/or slaughter[/TD]
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[TD="class: filtrer_th ta_left, colspan: 2"]**Not calculated because of missing information[/TD]
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[TD] Epidemiology
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[TD="class: filtrer_th ta_left"]Source of the outbreak(s) or origin of infection[/TD]
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• Contact with wild species

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[TD="class: filtrer_th ta_left"]Epidemiological comments[/TD]
[TD]During the active monitoring of the ornithofauna in the surroundings of Ubsu-Nur Lake, a few wild birds were shot. Genome of H5 avian influenza virus was detected in 17 samples from carcasses of birds [black-headed gull (Larus ridibundus), grey heron (Ardea cinerea), common tern (Sterna hirundo), great crested grebe (Podiceps cristatus), great cormorant (Phalacrocorax carbo), duck (Anatidae)]. Sequence analysis of the isolates showed that they belonged to the Asian HPAI virus H5 lineage A/Guandong/1/96, clade 2.3.4.4.[/TD]
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[TD] Control measures
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[TD="class: filtrer_th ta_left"]Measures applied[/TD]
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• Screening
• Control of wildlife reservoirs
• Vaccination permitted (if a vaccine exists)
• No treatment of affected animals

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[TD="class: filtrer_th ta_left"]Measures to be applied[/TD]
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• No other measures

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[TD] Diagnostic test results
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[TD="class: filtrer_th ta_left"]Laboratory name and type[/TD]
[TD="class: filtrer_th ta_left"]Species[/TD]
[TD="class: filtrer_th ta_left"]Test[/TD]
[TD="class: filtrer_th ta_left"]Test date[/TD]
[TD="class: filtrer_th ta_left last"]Result[/TD]
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[TD="class: filtrer"]All-Russian Research Institute for Animal Health (FGBI-ARRIAH) (National laboratory)[/TD]
[TD="class: filtrer"]Anatidae (unidentified)[/TD]
[TD="class: filtrer"]virus sequencing[/TD]
[TD="class: filtrer"]09/06/2016[/TD]
[TD="class: filtrer cb-centree last"]Positive[/TD]
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[TD="class: filtrer"]All-Russian Research Institute for Animal Health (FGBI-ARRIAH) (National laboratory)[/TD]
[TD="class: filtrer"]Black-headed Gull[/TD]
[TD="class: filtrer"]virus sequencing[/TD]
[TD="class: filtrer"]09/06/2016[/TD]
[TD="class: filtrer cb-centree last"]Positive[/TD]
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[TD="class: filtrer"]All-Russian Research Institute for Animal Health (FGBI-ARRIAH) (National laboratory)[/TD]
[TD="class: filtrer"]Common Tern[/TD]
[TD="class: filtrer"]virus sequencing[/TD]
[TD="class: filtrer"]09/06/2016[/TD]
[TD="class: filtrer cb-centree last"]Positive[/TD]
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[TD="class: filtrer"]All-Russian Research Institute for Animal Health (FGBI-ARRIAH) (National laboratory)[/TD]
[TD="class: filtrer"]Great Cormorant[/TD]
[TD="class: filtrer"]virus sequencing[/TD]
[TD="class: filtrer"]09/06/2016[/TD]
[TD="class: filtrer cb-centree last"]Positive[/TD]
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[TD="class: filtrer"]All-Russian Research Institute for Animal Health (FGBI-ARRIAH) (National laboratory)[/TD]
[TD="class: filtrer"]Great Crested Grebe[/TD]
[TD="class: filtrer"]virus sequencing[/TD]
[TD="class: filtrer"]09/06/2016[/TD]
[TD="class: filtrer cb-centree last"]Positive[/TD]
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[TD="class: filtrer"]All-Russian Research Institute for Animal Health (FGBI-ARRIAH) (National laboratory)[/TD]
[TD="class: filtrer"]Grey Heron[/TD]
[TD="class: filtrer"]virus sequencing[/TD]
[TD="class: filtrer"]09/06/2016[/TD]
[TD="class: filtrer cb-centree last"]Positive[/TD]
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[TD="class: filtrer"]All-Russian Research Institute for Animal Health (FGBI-ARRIAH) (National laboratory)[/TD]
[TD="class: filtrer"]Anatidae (unidentified)[/TD]
[TD="class: filtrer"]real-time reverse transcriptase/polymerase chain reaction (RRT-PCR)[/TD]
[TD="class: filtrer"]09/06/2016[/TD]
[TD="class: filtrer cb-centree last"]Positive[/TD]
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[TD="class: filtrer"]All-Russian Research Institute for Animal Health (FGBI-ARRIAH) (National laboratory)[/TD]
[TD="class: filtrer"]Black-headed Gull[/TD]
[TD="class: filtrer"]real-time reverse transcriptase/polymerase chain reaction (RRT-PCR)[/TD]
[TD="class: filtrer"]09/06/2016[/TD]
[TD="class: filtrer cb-centree last"]Positive[/TD]
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[TD="class: filtrer"]All-Russian Research Institute for Animal Health (FGBI-ARRIAH) (National laboratory)[/TD]
[TD="class: filtrer"]Common Tern[/TD]
[TD="class: filtrer"]real-time reverse transcriptase/polymerase chain reaction (RRT-PCR)[/TD]
[TD="class: filtrer"]09/06/2016[/TD]
[TD="class: filtrer cb-centree last"]Positive[/TD]
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[TD="class: filtrer"]All-Russian Research Institute for Animal Health (FGBI-ARRIAH) (National laboratory)[/TD]
[TD="class: filtrer"]Great Cormorant[/TD]
[TD="class: filtrer"]real-time reverse transcriptase/polymerase chain reaction (RRT-PCR)[/TD]
[TD="class: filtrer"]09/06/2016[/TD]
[TD="class: filtrer cb-centree last"]Positive[/TD]
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[TD="class: filtrer"]All-Russian Research Institute for Animal Health (FGBI-ARRIAH) (National laboratory)[/TD]
[TD="class: filtrer"]Great Crested Grebe[/TD]
[TD="class: filtrer"]real-time reverse transcriptase/polymerase chain reaction (RRT-PCR)[/TD]
[TD="class: filtrer"]09/06/2016[/TD]
[TD="class: filtrer cb-centree last"]Positive[/TD]
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[TD="class: filtrer"]All-Russian Research Institute for Animal Health (FGBI-ARRIAH) (National laboratory)[/TD]
[TD="class: filtrer"]Grey Heron[/TD]
[TD="class: filtrer"]real-time reverse transcriptase/polymerase chain reaction (RRT-PCR)[/TD]
[TD="class: filtrer"]09/06/2016[/TD]
[TD="class: filtrer cb-centree last"]Positive[/TD]
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[TD] Future Reporting
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[TD="class: filtrer"]The event is continuing. Weekly follow-up reports will be submitted.[/TD]
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