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Nat Struct Mol Biol . Structural and functional characteristics of the SARS-CoV-2 Omicron subvariant BA.2 spike protein

tetano

Editor, Senior Moderator
Nat Struct Mol Biol


. 2023 Jul 10.
doi: 10.1038/s41594-023-01023-6. Online ahead of print. Structural and functional characteristics of the SARS-CoV-2 Omicron subvariant BA.2 spike protein

Jun Zhang[SUP] #[/SUP][SUP] 1 2 [/SUP], Weichun Tang[SUP] #[/SUP][SUP] 3 [/SUP], Hailong Gao[SUP] #[/SUP][SUP] 1 2 [/SUP], Christy L Lavine[SUP] 4 [/SUP], Wei Shi[SUP] 1 2 [/SUP], Hanqin Peng[SUP] 1 [/SUP], Haisun Zhu[SUP] 5 [/SUP], Krishna Anand[SUP] 5 [/SUP], Matina Kosikova[SUP] 3 [/SUP], Hyung Joon Kwon[SUP] 3 [/SUP], Pei Tong[SUP] 6 [/SUP], Avneesh Gautam[SUP] 6 [/SUP], Sophia Rits-Volloch[SUP] 1 [/SUP], Shaowei Wang[SUP] 7 [/SUP], Megan L Mayer[SUP] 8 [/SUP], Duane R Wesemann[SUP] 6 [/SUP], Michael S Seaman[SUP] 4 [/SUP], Jianming Lu[SUP] 7 9 [/SUP], Tianshu Xiao[SUP] 10 11 [/SUP], Hang Xie[SUP] 12 [/SUP], Bing Chen[SUP] 13 14 [/SUP]



Affiliations
Abstract

The Omicron subvariant BA.2 has become the dominant circulating strain of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) in many countries. Here, we have characterized structural, functional and antigenic properties of the full-length BA.2 spike (S) protein and compared replication of the authentic virus in cell culture and an animal model with previously prevalent variants. BA.2 S can fuse membranes slightly more efficiently than Omicron BA.1, but still less efficiently than other previous variants. Both BA.1 and BA.2 viruses replicated substantially faster in animal lungs than the early G614 (B.1) strain in the absence of pre-existing immunity, possibly explaining the increased transmissibility despite their functionally compromised spikes. As in BA.1, mutations in the BA.2 S remodel its antigenic surfaces, leading to strong resistance to neutralizing antibodies. These results suggest that both immune evasion and replicative advantage may contribute to the heightened transmissibility of the Omicron subvariants.


 
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