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Nat Commun . Tubeimosides are pan-coronavirus and filovirus inhibitors that can block their fusion protein binding to Niemann-Pick C1

tetano

Editor, Senior Moderator
Nat Commun


. 2024 Jan 2;15(1):162.
doi: 10.1038/s41467-023-44504-4. Tubeimosides are pan-coronavirus and filovirus inhibitors that can block their fusion protein binding to Niemann-Pick C1

Ilyas Khan[SUP] 1 [/SUP], Sunan Li[SUP] 1 [/SUP], Lihong Tao[SUP] 1 [/SUP], Chong Wang[SUP] 1 [/SUP], Bowei Ye[SUP] 2 [/SUP], Huiyu Li[SUP] 2 [/SUP], Xiaoyang Liu[SUP] 1 [/SUP], Iqbal Ahmad[SUP] 1 [/SUP], Wenqiang Su[SUP] 1 [/SUP], Gongxun Zhong[SUP] 1 [/SUP], Zhiyuan Wen[SUP] 1 [/SUP], Jinliang Wang[SUP] 1 [/SUP], Rong-Hong Hua[SUP] 1 [/SUP], Ao Ma[SUP] 2 [/SUP], Jie Liang[SUP] 2 [/SUP], Xiao-Peng Wan[SUP] 3 [/SUP], Zhi-Gao Bu[SUP] 4 [/SUP], Yong-Hui Zheng[SUP] 5 [/SUP]



Affiliations
Free PMC article Abstract

SARS-CoV-2 and filovirus enter cells via the cell surface angiotensin-converting enzyme 2 (ACE2) or the late-endosome Niemann-Pick C1 (NPC1) as a receptor. Here, we screened 974 natural compounds and identified Tubeimosides I, II, and III as pan-coronavirus and filovirus entry inhibitors that target NPC1. Using in-silico, biochemical, and genomic approaches, we provide evidence that NPC1 also binds SARS-CoV-2 spike (S) protein on the receptor-binding domain (RBD), which is blocked by Tubeimosides. Importantly, NPC1 strongly promotes productive SARS-CoV-2 entry, which we propose is due to its influence on fusion in late endosomes. The Tubeimosides' antiviral activity and NPC1 function are further confirmed by infection with SARS-CoV-2 variants of concern (VOC), SARS-CoV, and MERS-CoV. Thus, NPC1 is a critical entry co-factor for highly pathogenic human coronaviruses (HCoVs) in the late endosomes, and Tubeimosides hold promise as a new countermeasure for these HCoVs and filoviruses.


 
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