Monkeypox virus isolate MPXV_USA_2022_MA001, complete genome - National Library of Medicine. May 21, 2022

[Mary Wilson]

Duncan MacCannell
@dmaccannell

Preliminary viral sequence for the first 2022 US #monkeypox virus case (Massachusetts) has been posted to Genbank. Fantastic (and speedy!) work by @massgov DPH,@NCEZID DHCPP and
@NCBI. #opendata #publichealth #genomicepi https://ncbi.nlm.nih.gov/nuccore/ON563414…
5:49 PM · May 20, 2022

https://twitter.com/dmaccannell/status/1527783568977428481?cxt=HHwWgoCgqffD47MqAAAA
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GenBank: ON563414.2


LOCUS ON563414 197124 bp DNA linear VRL 21-MAY-2022

DEFINITION Monkeypox virus isolate MPXV_USA_2022_MA001, complete genome.

ACCESSION ON563414

VERSION ON563414.2

SOURCE Monkeypox virus

ORGANISM Monkeypox virus
Viruses; Varidnaviria; Bamfordvirae; Nucleocytoviricota; Pokkesviricetes; Chitovirales; Poxviridae; Chordopoxvirinae; Orthopoxvirus.

REFERENCE 1 (bases 1 to 197124) AUTHORS Gigante,C.M., Smole,S., Wilkins,K., McCollum,A., Hutson,C., Davidson,W., Rao,A., Brown,C. and Li,Y. TITLE Draft monkeypox virus genome from confirmed monkeypox case in Massachusetts, United States, May 2022 JOURNAL Unpublished

REFERENCE 2 (bases 1 to 197124)

AUTHORS Gigante,C.M., Smole,S., Wilkins,K., McCollum,A., Hutson,C., Davidson,W., Rao,A., Brown,C. and Li,Y.

TITLE Direct Submission

JOURNAL Submitted (20-MAY-2022) Division of High-Consequence Pathogens and Pathology, Centers for Disease Control and Prevention, 1600 Clifton Road, Atlanta, GA 30329, USA

COMMENT On May 21, 2022 this sequence version replaced ON563414.1.

https://www.ncbi.nlm.nih.gov/nuccore/ON563414

 

[Mary Wilson]

Discussion of on-going MPXV genome sequencing

Monkeypox

This topic is for discussion of the 2022 monkeypox outbreak genomes and phylogenies

https://virological.org/t/discussion-of-on-going-mpxv-genome-sequencing/802#post_5