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Man Made H5N1 - Super Version

Re: Man Made H5N1 - Super Version

it depends on the details of the experiment, which are secret.
How easier is it to redo the experiment, if the secret data were known ?
Fouchier,Kawaoka etc. should know, but from what I read
I don't trust their judgement on this very much.
So for me it's OK to have NSABB involved.
But then, I know nothing about NSABB and their qualification...
 
Re: Man Made H5N1 - Super Version

Schism over H5N1 Avian Flu Research Leaks Out

By Christine Gorman | February 3, 2012


NEW YORK—Sparks flew Thursday night at a New York Academy of Sciences panel discussion about whether or not certain recent research into the H5N1 avian flu virus has created a major biosecurity threat and what, if anything, to do about it.

snip

Michael Osterholm, director of the Center for Infectious Disease Research and Policy at the University of Minnesota in Minneapolis and a member of the National Science Advisory Board for Biosecurity (NSABB), characterized as “propaganda” a scientific paper published last week by co-panelist Peter Palese, a noted flu researcher at Mt. Sinai School of Medicine in New York City.

snip

Update (8:41 PM, Eastern): Carl Zimmer originally posted the shorter version of Osterholm’s quote as well. Carl has since checked his tape and concluded that in fact Osterholm said, “You do not represent the mainstream of influenzologists when it comes to this issue on influenza.”


http://blogs.scientificamerican.com...chism-over-h5n1-avian-flu-research-leaks-out/
 
Re: Man Made H5N1 - Super Version

Flu Fighters
February 3rd, 2012 2:26 AM by Carl Zimmer

snip

Laurie Garrett, an award-winning health reporter who now works at the Council on Foreign Relations, pointed out that the flu is not just something that American scientists study in their labs. It’s a global problem. There’s a huge amount of resentment in poor countries where bird flu is the biggest threat, not just to humans, but to the poultry industry. “Poor people are killing their chickens for you,” Garrett said. “They’re going bankrupt.”

Making matters worse, as Garrett has recently written, is the distrust that has developed in the developing world towards Western medical research and the pharmaceutical industry. Indonesia, where many of the H5N1 deaths have occurred, has been reluctant to share bird flu samples with Western scientists, for fear that they would make huge profits from vaccines developed from them. The World Health Organization has set up an international agreement for the exchange of wild bird flu strains between different countries, but it’s in fragile shape.

So for all the sparks that flew in New York Thursday night, the real fireworks over the flu are yet to come.

[Update 2/3 9 am: Corrected description of Racaniello's experiment. Thanks to Matt Frieman. 2:50 pm Fixed Fouchier's institution name and month of his talk. Thanks to Jon Cohen. 8 pm: Expanded Osterholm's "mainstream of influenzologists" quote after seeing his objection to a similarly truncated version in Christine Gorman's story for Scientific American and reviewing my own recording. It's a valid clarification .]

http://blogs.discovermagazine.com/loom/2012/02/03/flu-fighters/
 
Re: Man Made H5N1 - Super Version

A Chat with Mike Osterholm

Posted on 2012.02.04 by Alan

I got a call last night from Mike Osterholm, noted epidemiologist and member of the National Science Advisory Board for Biosecurity (NSABB). He wanted to talk about H5N1 flu ? if you don?t know why, scroll down to the previous few posts.

First, I want to thank Mike for calling. We had a good conversation in which I think we came to understand each others? viewpoints a bit better, though we still disagree strongly on some key issues. That means that as I had hoped, the H5N1/censorship debate is finally moving forward. To clarify my own position, and also help those who aren?t in direct touch with NSABB members, here?s a synopsis of what we talked about. Bear in mind that this was not an ?on the record? interview, so I won?t be quoting Mike, but I?m pretty sure he won?t mind me discussing our conversation publicly. If I misstate anything, I hope he posts up in the comments to correct it.

more..

http://alandove.com/content/2012/02/a-chat-with-mike-osterholm/
 
Re: Man Made H5N1 - Super Version

Mammalian-Transmissible H5N1 Influenza: the Dilemma of Dual-Use Research


  1. Robert G. Webster
+ Author Affiliations

  1. <address>Division of Virology, Department of Infectious Diseases, St. Jude Children’s Research Hospital, Memphis, Tennessee, USA</address>

  1. Address correspondence to robert.webster@stjude.org.


Next Section

ABSTRACT


The National Science Advisory Board for Biosecurity (NSABB)’s recommendation to restrict publication of the details of the generation of mammalian-transmissible H5N1 influenza virus is unprecedented. Dual-use considerations indicated that the potential biosecurity risks of a transmissible H5N1 virus with a possible mortality of 50% in humans outweigh the substantial benefits of open and complete scientific exchange in this case, although the benefits include potential early detection strategies for H5N1 viruses with specific genetic markers and control strategies, including development of antivirals and vaccines. It is argued that both the funding agency (the National Institute of Allergy and Infectious Diseases) and the scientists were responding to societal needs and acted entirely responsibly. These studies usher in a new era for life sciences, compelling the research community to confront important decisions: under what conditions should such research be done? How can the principle of full release of information be balanced with the moral imperative to protect the public health?

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Commentary


The majority of biological scientists are surprisingly unaware of dual-use research and the role of the U.S. National Science Advisory Board for Biosecurity (NSABB), although influenza researchers did know that a review board had recommended publication of Jeffrey Taubenberger’s complete sequence of the 1918 Spanish influenza virus (1, 2), despite potential biosecurity risks. Consequently, authors and journals alike were surprised by the NSABB’s recommendation that the full details of the generation of mammalian-transmissible H5N1 influenza virus be withheld. Why the apparent reversal in policy? Why does the risk of publishing the details of H5N1 transmissibility in mammals outweigh the benefits of disseminating important new information of immense human and veterinary public health importance?
The reasons include the greater lethality of H5N1 influenza (>50%) than of Spanish influenza (2.5%) in humans, the availability of highly pathogenic H5N1 viruses in nature, and the nearly universal susceptibility of humans to H5N1 infection. This combination of factors creates an unacceptably high level of risk to humanity should mammalian-transmissible H5N1 virus be accidentally or intentionally released. To cope with this dilemma, the NSABB recommended publication of revised manuscripts that withheld some of the details. A full manuscript would be prepared for distribution to global health officials on a need-to-know basis after further consideration and planning.
Both the Fouchier and Kawaoka groups used the ferret model to demonstrate mammalian transmissibility of highly pathogenic H5N1 virus. While the ferret is considered the best available model of human influenza virus infection and transmission, we do not know whether the ferret fully recapitulates these events in humans. For one thing, H5N1 infection tends to be milder in ferrets than in humans; only a minority of H5N1 strains are lethal in ferrets, whereas lethality greater than 50% has been documented in humans. Thus, while we cannot confidently equate transmissibility and pathogenicity of influenza virus in ferrets and humans, can we afford to disregard data from the best available model?
Concern has been expressed that the agency funding the research (the National Institute of Allergy and Infectious Diseases [NIAID]) and the two groups of scientists conducting the research on H5N1 influenza transmissibility may have acted irresponsibly (3). However, after the 1997 emergence of H5N1 influenza in humans, with its greater than 50% lethality and its potential transmissibility from avians to humans, both the World Health Organization (WHO) (4) and a Blue Ribbon Panel of influenza research advisers to NIAID asserted that further H5N1 research was necessary (5). One of the research recommendations of the 2009 WHO Public Health Research Agenda for Influenza was to “Investigate virus-specific factors associated with zoonotic and pandemic potential (e.g., infectivity, transmissibility, and pathogenicity).” In 2006, the Blue Ribbon Panel on Influenza Research recommended to NIAID that “Learning more about how influenza viruses circulate between animal reservoirs and about the evolutionary pressures that lead to the emergence and spread of new viral subtypes—especially the factors that favor transmission from animals to humans—are urgent research priorities.” Unfortunately, neither the Blue Ribbon Panel nor WHO addressed the question of dual-use research. The focus was on the benefits of knowledge, including the development of better control strategies, such as novel antivirals and vaccines. Now that researchers have generated mammalian-transmissible H5N1 and the U.S. NSABB has raised the dual-use concern, there is a clear and acknowledged need for full discussion of the way forward. WHO has also raised considerable concern about the risk of developing mammalian-transmissible H5N1 viruses.
The two manuscripts formally demonstrating generation of mammalian-transmissible H5N1 influenza virus make major contributions to our knowledge and usher in a new era in the life sciences. The question before the scientific community is how to preserve scientific openness while minimizing risk to the public. Control strategies for influenza and other emerging diseases are not adequately developed; the Fineberg Report on the evaluation of WHO’s response to the 2009 H1N1 pandemic (6) emphasized that “the world is ill prepared to respond to a severe influenza pandemic or to any similarly global, sustained and threatening public health emergency.” The urgent need for general guidance in this matter is reminiscent of the dilemma addressed at the Asilomar conference on recombinant DNA molecules in 1975 (7). One possibility is to involve the national academies of science from all interested countries and WHO in considering the topic of dual-use research and an approach that both promotes research and maintains biosecurity. It has been argued that suppression of information serves no purpose, as the information will inevitably be “leaked.” Although this viewpoint is likely correct, I do not believe we should publish the detailed methods of preparing transmissible H5N1.
Further, we must consider and establish the biosecurity level needed for future work on transmissible H5N1. Because highly pathogenic H5N1 is enzootic in multiple regions of Eurasia, the use of biosecurity level 4 (BSL4) for all H5N1 research would markedly restrict advancement of knowledge needed for vaccine and antiviral research. Enhancing BSL3 biosecurity with electronic surveillance, advanced personal protective equipment (PPE), and prior dual-use assessment of proposed studies is a possibility for further consideration. It is noteworthy that in the United States there were 395 biosecurity breaches involving select agents and 7 laboratory-acquired infections during 2003 to 2009 (8). These incidents, which occurred in both BL3 and BL4 laboratories, highlight the potential risks and the need to fully consider improved biosecurity and the immunization of staff with regularly updated H5N1 vaccines.
The groundbreaking manuscripts by the Fouchier and Kawaoka groups will be of great interest to life scientists and will no doubt increase their familiarity with the concept of dual-use research. These two reports challenge us to take action to ensure that research and open dissemination of knowledge can be safeguarded without compromising biosecurity. Both causes are fundamentally important, but public safety must not be compromised. While bioterrorism is of real concern, nature has the potential to do much greater damage.

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ACKNOWLEDGMENTS


Robert Webster is supported by the National Institute of Allergy and Infectious Diseases, National Institutes of Health, Department of Health and Human Services, contract no. HSN266200700005C, and by the American Lebanese Syrian Associated Charities.
I thank Sharon Naron for scientific editing and James Knowles for manuscript preparation.

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Notes


The views expressed in this Commentary do not necessarily reflect the views of the journal or of ASM.

Previous SectionNext Section

Footnotes



  • Citation Webster RG. 2012. Mammalian-transmissible H5N1 influenza: the dilemma of dual-use research. mBio 3(1):e00005-12. doi:10.1128/mBio.00005-12.


  • Copyright © 2012 Webster.
This is an open-access article distributed under the terms of the Creative Commons Attribution-Noncommercial-Share Alike 3.0 Unported License, which permits unrestricted noncommercial use, distribution, and reproduction in any medium, provided the original author and source are credited.

Previous Section

REFERENCES


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http://mbio.asm.org/content/3/1/e00005-12.full
 
Re: Man Made H5N1 - Super Version

Science Should Be in the Public Domain


  1. Vincent R. Racaniello
+ Author Affiliations

  1. <address>Department of Microbiology and Immunology, Columbia University College of Physicians and Surgeons, New York, New York, USA</address>

  1. Address correspondence to Vincent R. Racaniello, vrr1@columbia.edu.


Next Section

ABSTRACT


Variants of avian influenza H5N1 virus that are transmitted by the airborne route among ferrets have been identified. The National Science Advisory Board for Biosecurity has advised against publication of the details of the methods used to obtain these viruses and the amino acid changes that lead to transmission in ferrets. This decision is not based on sound scientific principles and risks setting a precedent that will make it easier to put in place highly restrictive regulations on scientific research and publication.

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Commentary


Two laboratories recently identified variants of an avian influenza H5N1 virus strain that are transmitted by the airborne route among ferrets (1). When these laboratories submitted their work for publication, the National Science Advisory Board for Biosecurity (NSABB) asked the authors to remove critical details from the manuscripts to ensure that they cannot be used by bioterrorists. This decision is wrong, not only because it rests on weak scientific grounds but also because it threatens to transform the landscape of biological research by setting a precedent to restrict research that can benefit, not harm, humanity.
The goal of the experiments was to determine what makes the influenza H5N1 virus transmissible. This virus strain is lethal in birds, humans, and ferrets, but airborne transmission does not readily occur among humans or ferrets. One group found that after 10 serial ferret-to-ferret passages, a virus that could spread by the aerial route among ferrets was obtained. The NSABB asked that details on how the virus was isolated and the amino acid changes leading to transmissibility be redacted from the manuscript.
A major reason why the NSABB does not want this information made public is that the virus is believed to be highly lethal in humans. The chair of the NSABB notes that he “can’t think of another pathogenic organism that is as scary as this one.” The reason for this view is exemplified by a recent statement about H5N1 in the New York Times: “In its natural form, it is known to have infected only about 600 people since its discovery in 1997, but it killed more than half of them” (2). We cannot say with any certainty that the virus has infected only about 600 people. What we do know is that among the 600 seriously ill individuals infected with H5N1 influenza virus who are admitted to the hospital, over half of them die.
The fatality rate of avian H5N1 influenza virus in humans is determined by dividing the number of fatalities by the number of infections. We do not know the last number—but there are hints that it could be quite large. In a recent study of rural Thai villagers, sera from 800 individuals were collected and analyzed for antibodies against several avian influenza viruses, including H5N1, by hemagglutination inhibition and neutralization assays (3). The results indicate that 73 participants (9.1%) have antibodies against one of two different H5N1 strains, suggesting that subclinical avian influenza virus infections are frequent in Thailand. If 9% of the rural Asian population has been infected with avian H5N1 influenza virus strains, it would dramatically change our view of the pathogenicity of the virus. Extensive serological studies must be done to determine the extent of human infection with avian H5N1 influenza viruses.
Ferrets are not humans and cannot be used to determine whether any influenza virus is a threat to humanity.
Ferrets are a good model for influenza—they display similar flu-like symptoms, immune responses, and pathological alterations, such as elevated temperature, weight loss, and histological changes (4). It would be foolish to conclude that ferret influenza is the same as human influenza in all aspects. Not all influenza virus strains have the same virulence in humans and ferrets. An example is the 2009 pandemic H1N1 virus, which caused severe infections in some ferret studies, but was relatively mild in humans (5). The fact that an H5N1 virus is transmissible among ferrets does not mean that it will be equally transmissible among humans. The experiment to answer this question cannot be done.
Passage of viruses in a different host is one strategy for reducing viral virulence in humans. Many live, attenuated viral vaccines have been produced in this way, including vaccines against yellow fever virus and poliovirus (6, 7). The possibility that passage of the H5N1 virus in ferrets will attenuate its virulence in humans has been ignored.
It is highly unlikely that the sequence of the ferret-adapted H5N1 influenza virus would be used for bioterrorism, as its potential for transmission and lethality in humans is unknown. Bioterrorists do not want to carry out an experiment; they want to instill terror. Assuming that the H5N1 virus passaged in ferrets could start a pandemic, knowing the amino acid changes required for transmission in ferrets does not immediately enable construction of a biological weapon. The virus must be recovered from cloned DNA, which requires finely honed skills in virology. A good virologist would have already thought to serially passage the H5N1 virus in ferrets, which would be faster than reconstructing a virus from the nucleotide sequence.
It seems simplistic to assume that laboratory-modified viruses can cause extensive disease in humans. When humans genetically modify viruses, they generally do not know what the virus needs to replicate efficiently, cause disease, and transmit among humans. Consequently, they are likely to introduce changes that attenuate pathogenesis in humans. In nature there is strong selection for fitness and transmission. To think that we can duplicate the enormous diversity and selection pressures that occur in the wild is a severe case of scientific hubris.
No one can guarantee that the ferret-passaged H5N1 virus would not be lethal and transmissible in humans. However, the same could be said about many laboratory-modified viruses, none of which have attracted the attention of the NSABB or the press. When we created the first animal virus from cloned DNA in 1981 (8), there were no calls to redact the paper or prevent further research, despite the theoretical possibility that this reagent might be used to produce more-virulent polioviruses. It was recognized that cloned viral DNA could be used to make important advances in our understanding of viral replication and pathogenesis.
Perhaps more troubling than the weak scientific basis for the NSABB’s argument is the precedent set by withholding experimental details from a scientific publication. Science has always worked best when information is freely accessible. Unexpected individuals from diverse areas often solve difficult research problems. For decades, scientists have carried out experiments on pathogens, and the results have been published in a way that allows other scientists to repeat the experiments, verify conclusions, and expand on what is known. This cycle of publication, replication, and advancement has lead to most scientific and medical advances of the past century and has saved millions of lives. To suggest that studies of legitimate scientific merit should be published without complete methods and data is to abandon a system that brought us to the modern age of medicine.
The decision by the NSABB to restrict publication of data on H5N1 influenza viruses that are transmissible among ferrets is not rooted in sound scientific principles. Of greater concern is that it risks setting a precedent that will make it easier in the future to put in place highly restrictive regulations on scientific research and publication. Fear has clouded the NSABB’s vision. We cannot allow fear to limit our ability to address medical problems.

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Notes

The views expressed in this Commentary do not necessarily reflect the views of the journal or of ASM.

Previous SectionNext Section
Footnotes


  • Citation Racaniello VR. 2012. Science should be in the public domain. mBio 3(1):e00004-12. doi:10.1128/mBio.00004-12.


  • Copyright © 2012 Racaniello.
This is an open-access article distributed under the terms of the Creative Commons Attribution-Noncommercial-Share Alike 3.0 Unported License, which permits unrestricted noncommercial use, distribution, and reproduction in any medium, provided the original author and source are credited.

Previous Section

REFERENCES


  1. 1.
    1. Enserink M
    <cite>. 2011. Infectious diseases. Controversial studies give a deadly flu virus wings. <abbr class="cit-jnl-abbrev">Science </abbr> 334:1192–1193. </cite>
    Abstract/FREE Full Text
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    1. McNeil DG Jr.,
    2. Grady D
    <cite>. 2 January 2012. How hard would it be for avian flu to spread? New York Times, New York, NY. http://www.nytimes.com/2012/01/03/health/an-explanation-of-how-avian-flu-spreads.html?pagewanted=all.</cite>
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    <cite>. 1954. Studies on variants of poliomyelitis virus: I. Experimental segregation and properties of avirulent variants of three immunologic types. <abbr class="cit-jnl-abbrev">J. Exp. Med</abbr>. 9:551–576.</cite>
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    Abstract/FREE Full Text
http://mbio.asm.org/content/3/1/e00004-12.full
 
Re: Man Made H5N1 - Super Version

The H5N1 Manuscript Redaction Controversy


  1. Arturo Casadevall and
  2. Thomas Shenk

  1. Address correspondence to Arturo Casadevall, casadeva@aecom.yu.edu.


Next Section
Editorial

Scientists are an argumentative bunch, and science is no stranger to controversy. Since the beginning of the scientific revolution, science has witnessed and engaged in great controversies, including heliocentrism, the theory of evolution, the N-ray affair, and most recently the debate over climate warming. Prior controversies were settled with additional scientific study, which provided convincing data for one faction or the other. Today scientists are engaged in a new type of controversy involving the benefits, debits, appropriateness, and wisdom of redacting experimental data from scientific manuscripts on the grounds that the information could be used for nefarious purposes. This controversy was triggered when a government advisory committee known as the National Science Advisory Board for Biosecurity (NSABB) examined two manuscripts describing genetic changes that enabled bird flu virus (H5N1) to become transmissible in mammals. The NSABB then advised the U.S. Department of Health and Human Services that the main conclusions of the study should be published but that much of the methodology and experimental data that would allow repetition of the experiments and/or the de novo synthesis of mammalian-transmissible H5N1 virus should be redacted (for the press statement, see http://www.nih.gov/news/health/dec2011/od-20.htm).
Unlike other contentious areas of human endeavor, such as religion, philosophy, and politics, science has historically been lucky in that it has always had an accepted mechanism for conflict resolution in the form of carrying out additional experimental work. However, the current H5N1 manuscript redaction controversy cannot be settled by additional experimentation, at least not in real time, because many of the issues involved in favoring or opposing redaction consist of differences in beliefs, principles, and judgment calls. The discussion is further constrained by ignorance and/or uncertainty on major scientific and medical questions regarding the relative value of, and danger posed by, the information to be redacted. For example, precise answers to such questions as to whether infectivity in ferrets translates to humans, the case/fatality ratios of H5N1 infection in humans, and the relative value of mutational information to public health agencies and terrorists are not yet available, and many of the arguments for or against publication are largely a matter of opinion, judgment, and conjecture. It is all but certain that the well-tried tools of experimental science will, in the future, provide additional information that informs the wisdom of the decisions taken today. However, that information is not at hand to affect the current actions, debate, and controversy. Hence, scientists find themselves in somewhat unfamiliar territory as both sides try to convince their colleagues, and the public, of the wisdom of their positions by mixing hard science with nonscientific forms of argumentation, including belief-based arguments, positions of principle, and the art of politics and political persuasion.
In an attempt to inform the ongoing discussion, mBio has commissioned three views on the H5N1 redaction controversy, written by Keim, Racaniello, and Webster (1, 2, 3). Our goal in publishing these views is to provide a venue for differences of opinion that will inform the debate. We note that the overwhelming majority of, if not all, participants in this controversy are well-informed and well-meaning individuals who hope to help and protect both society and science by espousing and promoting their views. We believe that a healthy debate will lead to the best decisions and help avoid great mistakes. We are also fully aware that some aspects of the ongoing debate have echoes in past philosophical debates, since the issues in question are in essence questions of value, belief, judgment, and principle. Consequently, we urge comity, respect, civility, self-examination, consideration, kindness, and generosity as we all navigate through this uncharted territory. In that spirit, we encourage our readership to contribute to the debate by using the commenting feature at the end of the ?full text? versions of the online articles.

Arturo Casadevall
Editor-in-Chief, mBio

Thomas Shenk
Chair, Publications Board
American Society for Microbiology


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Footnotes


  • Dr. Casadevall serves on the NSABB, and the views expressed in this Editorial do not represent official policy or those of the NSABB. In addition, the views expressed in this Editorial do not necessarily reflect the views of the journal or of ASM.
  • Citation Casadevall A, Shenk T. 2012. The H5N1 manuscript redaction controversy. mBio 3(1):e00022-12. doi:10.1128/mBio.00022-12.


  • Copyright ? 2012 Casadevall and Shenk.
This is an open-access article distributed under the terms of the Creative Commons Attribution-Noncommercial-Share Alike 3.0 Unported License, which permits unrestricted noncommercial use, distribution, and reproduction in any medium, provided the original author and source are credited.

Previous Section

REFERENCES


  1. 1.
    1. Keim PS
    <cite>. 2012. The NSABB recommendations: rationale, impact, and implications. <abbr class="cit-jnl-abbrev">mBio </abbr> 3(1):e00021-12. </cite>
    Abstract/FREE Full Text

  2. 2.
    1. Racaniello VR
    <cite>. 2012. Science should be in the public domain. <abbr class="cit-jnl-abbrev">mBio </abbr> 3(1):e00004-12. </cite>
    Abstract/FREE Full Text

  3. 3.
    1. Webster RG
    <cite>. 2012. Mammalian-transmissible H5N1 influenza: the dilemma of dual-use research. <abbr class="cit-jnl-abbrev">mBio </abbr> 3(1):e00005-12. </cite>
    Abstract/FREE Full Text
 
Re: Man Made H5N1 - Super Version

The NSABB Recommendations: Rationale, Impact, and Implications


  1. Paul S. Keim
+ Author Affiliations

  1. <address>National Science Advisory Board for Biosecurity, Office of Biotechnology Activities, National Institutes of Health, Bethesda, Maryland, USA; Center for Microbial Genetics and Genomics, Northern Arizona University, Flagstaff, Arizona, USA; and the Translational Genomics Research Institute, Phoenix, Arizona, USA </address>

  1. Address correspondence to paul.keim@nau.edu.


Next Section

ABSTRACT


The National Science Advisory Board for Biosecurity (NSABB) has recommended that two scientific papers concerning the laboratory adaptation of avian H5N1 influenza virus to mammal-to-mammal respiratory transmission restrict their content to prevent others from replicating their work. After hearing from experts in the field of influenza research and public health, the benefits of the research were deemed less important than the potential negative consequences. The evaluation followed established NSABB procedures and prior policy recommendations for identifying dual use research of concern (DURC). This recommendation was received by the United States Government, endorsed and forwarded to the research teams and scientific journals involved with the publications.

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Commentary


In October 2011, the U.S. National Science Advisory Board for Biosecurity (NSABB) was asked to review two papers for their potential as dual-use research of concern (DURC). These papers contained results on the adaptation of the highly pathogenic avian influenza A/H5N1 virus to mammalian hosts such that it could be transmitted via respiratory droplets from animal to animal. We found that this work had great potential for harm or misuse and “recommended that the general conclusions highlighting the novel outcome be published, but that the manuscripts not include the methodological and other details that could enable replication of the experiments by those who would seek to do harm” (NIH Press Release, http://www.nih.gov/news/health/dec2011/od-20.htm). The recommendation “not to publish scientific results” was highly unusual and the first such recommendation by the NSABB membership. We are primarily a group of actively practicing basic research scientists, and we have consistently advocated for open publication practices. As per our advisory nature to the U.S. Government, these recommendations were not binding and could have been ignored. However, after careful consideration, the U.S. Government accepted the recommendations and relayed them to researchers and the scientific journals.
There was agreement by NSABB voting members for these recommendations, though the rationale of individual members as they arrived at the same conclusions varied. We had to judge the beneficial attributes of these research results against their potential to cause harm. Over the last 7 years, NSABB has studied the issues associated with dual-use research, including risk/benefit assessments, and developed principles and tools to guide the deliberative process. Much of this has been formalized in a series of reports and recommendations that are available at a public website (http://oba.od.nih.gov/biosecurity/biosecurity.html). Despite this experience and carefully crafted guidance, there are points in the deliberations where uncertainties and even contradictory information necessitate subjective decisions. When do the negative consequences of research results outweigh the beneficial ones? Is there a clear and bright line to be crossed or is this a more nebulous and fuzzy region of “yes” or “no” for this research? I will present only my personal rationale and how I came to the strong conclusion that this work had the potential to be very dangerous and that its communication should be restricted at this time.
I heard from members of the influenza research community and reviewed the World Health Organization (WHO) data indicating that this avian virus had a very high mortality rate in humans. While the influenza A/H5N1 virus rarely infects humans, when it does it causes catastrophic disease. We are all aware of the rapid global spread of human-adapted influenza both on a yearly basis and during less common pandemics. The documented devastation of the 1918 influenza pandemic, even with its lower mortality rate, was a testament to the powerful potential of influenza. The thought of combining the high human mortality of influenza A/H5N1 with a highly transmissible human-adapted phenotype was sobering. A pandemic by such a pathogen could reasonably be concluded to cause such devastation that it should be prevented at all costs.
I carefully considered how restricting the information would compromise scientific research progress and even how it would hinder public health efforts to prevent such a horrific pandemic. I know from firsthand experience that the free flow of information is part of the best and most productive research endeavors and that any restrictions burden the progress. The conclusion that this virus could be adapted to mammal-to-mammal respiratory transmission was, in my mind, the foremost beneficial part of the research. With this firm conclusion in hand, policy makers, granting agencies, public health officials, and vaccine and drug developers should have both the motivation and a compelling argument to move forward to improve our influenza-fighting infrastructure. The details of the research, on the other hand, would add little to this short-term effort and could enable someone to replicate the work in a short period of time. The short-term negative consequences of restricting experimental details seemed small in contrast to the large consequences of facilitating the replication of these experiments by someone with nefarious intent. Current public health surveillance and public health responses would be enhanced little by these details. This comes not only from my own professional experience in globally tracking dangerous pathogens but also from personally watching the 2009 H1N1 influenza pandemic spread globally. It was impossible to contain, and I believe that the same would be true for an H5N1 influenza pandemic. We were lucky in that the H1N1 virus has low virulence, but the best current data suggest that this would not be the case for the H5N1 virus. Publishing a detailed experimental protocol on how to produce a highly transmissible H5N1 virus in a highly regarded scientific journal is a very bad idea.
Since our recommendations were announced in mid-December, there has been considerable response from scientists, policy makers, funding agencies, and global health organizations. There have been criticisms that we were censoring and compromising academic freedom. There have been criticisms that restriction of the publications was insufficient and that even performing such experiments should be restricted. The debate has touched upon both biosafety and biosecurity aspects, with some calling for the destruction of the virus or for moving all such research to the highest safety level, biosafety level 4 (BSL-4). The NSABB has not yet offered specific recommendations concerning these statements, and my personal opinions are relatively unimportant. What is gratifying and essential is that the debate is occurring; it is occurring on an international stage, and it is occurring rapidly.
In the midst of NSABB deliberations and formulation of our recommendations, the need for a global debate to develop policy has always been in our discussions. Why should the NSABB be telling the world what to do? Why has not the world already had these discussions and debates? How could the NSABB stimulate the process such that global leaders in science, policy, and public health engage in a broad-based conversation on these issues? The specific NSABB recommendations seem to have been accepted and are being implemented by two research groups and two scientific journals; more importantly, the research issue of adapting an avian virus to mammals, potentially humans, is a topic that is being widely discussed. The influenza research community is voluntarily suggesting a moratorium on this type of research. The WHO has agreed to participate and facilitate in policy development. And the U.S. Government is working on guidelines for the distribution of restricted information.
Research and public policy will be developed from this global engagement process, a process that should increase the public’s confidence in the scientific endeavor, in scientists’ ethical behavior, and in the transparency that a free research environment embraces. The NSABB recommendations have been effective in both their primary and secondary goals. They are the right recommendations for this time and this problem.

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Notes

The views expressed in this Commentary do not necessarily reflect the views of the journal or of ASM.

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Footnotes


  • Citation Keim PS. 2012. The NSABB recommendations: rationale, impact, and implications. mBio 3(1):e00021-12. doi:10.1128/mBio.00021-12


  • Copyright © 2012 Keim
This is an open-access article distributed under the terms of the Creative Commons Attribution-Noncommercial-Share Alike 3.0 Unported License, which permits unrestricted noncommercial use, distribution, and reproduction in any medium, provided the original author and source are credited.



http://mbio.asm.org/content/3/1/e00021-12.full
 
Re: Man Made H5N1 - Super Version

I have posted the latest papers and blogs on this subject. I have posted only snips where there is not expressed consent to copy the entire article. Several papers are published in their entirety because they are open access.

I am greatly dismayed by the tenor of recent comments by some of the participants in this debate. Casting insults is not productive.

I agree mostly with JJackson. Thanks Jonathan for your comments.
 
Re: Man Made H5N1 - Super Version

Scientists studying bird flu must have biosecurity: Canada

The Canadian Press

Date: Saturday Feb. 4, 2012 8:10 AM ET
<!-- dateline -->

TORONTO<!-- /dateline --> ? If Canadian scientists want to conduct research on H5N1 flu viruses modified to enhance their ability to spread, the work will have to be done in laboratories with the top level of biosecurity, the Public Health Agency of Canada says.

The agency said in a statement that any research on the viruses in this country would need to be done in labs designated as Containment Level 4 -- known as BSL4 labs elsewhere. The only Level 4 labs in Canada are located at the National Microbiology Laboratory in Winnipeg.

That requirement is a step up from the one governing research on regular H5N1 viruses. Canadian scientists are allowed to work on those viruses in Level 3 laboratories.

Read more: http://www.ctv.ca/CTVNews/TopStories/20120204/health-birdflu-study-research-20120204/#ixzz1lSGhfVbp

-------------------------------------------------------

Public Health Agency of Canada

Biosafety Advisory:
Efficiently Transmissible Engineered Influenza A H5N1 Viruses

February 01, 2012

This biosafety advisory is being provided by the Public Health Agency of Canada (<ABBR title="Public Health Agency of Canada">PHAC</ABBR>) in response to recent publications of efficiently transmissible engineered Influenza A H5N1 viruses. The Pathogen Regulation Directorate (<ABBR title="Pathogen Regulation Directorate">PRD</ABBR>) has developed this advisory based on current scientific evidence available on this pathogen and is subject to review and change as more information becomes available. The Risk Group (<ABBR title="Risk Group">RG</ABBR>) of efficiently transmissible Influenza A H5N1 viruses is RG4.

1. Background

Influenza A H5N1 is a highly pathogenic avian influenza virus that emerged as a human pathogen in 1997 when it was transmitted from avian populations to humans in Hong Kong<SUP>(1,2)</SUP>. Since then, various countries around the world have reported human infections, particularly in Southeast Asia, the Middle East, and Africa. From 2003 to 2011, 574 human cases and 337 deaths have been confirmed by the World Health Organization; this correlates to a mortality rate of 59%<SUP>(3)</SUP>. H5N1 can cause death in healthy individuals with no pre-existing medical conditions.

In November 2011, three independent studies on H5N1 transmission in ferrets were either published online or submitted for publication. These studies have received a significant amount of attention due to their relative success in producing engineered H5N1 viruses capable of efficient transmission in ferrets, including via the air<SUP>(4-10)</SUP>. Ferrets are considered a good model for studying human influenza viruses<SUP>(11)</SUP>. The engineered transmissible H5N1 viruses are not currently in circulation, but it is widely agreed that if released, the clinical and economic impact could be devastating.

2. Biosafety Requirements

The following table summarizes the containment requirements for laboratories working with efficiently transmissible engineered Influenza A H5N1 viruses. No containment requirements are stipulated for non-proliferative clinical/diagnostic activities based on the fact that this virus is currently not in circulation. Laboratories should refer to the Laboratory Biosafety Guidelines, 3<SUP>rd</SUP> Edition, 2004 for a complete listing of the biosafety requirements.

H5N1 viruses capable of efficient human-to-human transmission, including via aerosols or the airborne route, are considered Risk Group 4 human pathogens and require Containment Level 4 physical containment and operational practices.
<TABLE class="widthFull whiteBG" border=1><THEAD class=bg-colour-grey-light><TR><TH id=t1-1 rowSpan=2>Sample Type and Activity</TH><TH id=t1-5 colSpan=3>Minimum Containment Level Requirements</TH></TR><TR><TH id=t1-2>CL2</TH><TH id=t1-3>CL3</TH><TH id=t1-4>CL4</TH></TR></THEAD><TBODY><TR><TH id=t1-6 class=alignLeft>Non-Proliferative Clinical/ Diagnostic Activities</TH><TD class=alignMiddleCenter colSpan=3 headers="t1-6 t1-5 t1-2 t1-3 t1-4">Not in circulation at this time see Section 3</TD></TR><TR><TH id=t1-7 class=alignLeft>Work Involving Positive Cultures </TH><TD headers="t1-7 t1-5 t1-2"></TD><TD headers="t1-7 t1-5 t1-3"></TD><TD class=alignMiddleCenter headers="t1-7 t1-5 t1-4">●</TD></TR><TR><TH id=t1-8 class=alignLeft>In Vivo Work</TH><TD headers="t1-8 t1-5 t1-2"></TD><TD headers="t1-8 t1-5 t1-3"></TD><TD class=alignMiddleCenter headers="t1-8 t1-5 t1-4">●</TD></TR></TBODY></TABLE>
3. Additional Risk Considerations

If an efficiently transmissible H5N1 virus was introduced into circulation, a risk assessment would be necessary to determine the regulatory requirements for different types of work, such as non-proliferative clinical/ diagnostic activities.

4. Transportation

Packaging, shipping and transport of specimens containing RG4 pathogens require specific instructions and procedures in accordance with the Transportation of Dangerous Goods Regulations, Transport Canada. For information on how to transport RG4 pathogens please contact the National Microbiological Laboratory (<ABBR title="National Microbiological Laboratory">NML</ABBR>) at Jay.Krishnan@phac-aspc.gc.ca or Carol.Stansfield@phac-aspc.gc.ca, or contact the 24/7 emergency phone line at (204) 999-7996 due to the stringent notification practices involved.

5. Contact Information

Please note that this advisory is based on currently available scientific evidence and is subject to review and change as new information becomes available. Further biosafety information may be obtained from the <ABBR title="Public Health Agency of Canada">PHAC</ABBR> Pathogen Regulation Directorate, on our website at: Laboratory Biosafety and Biosecurity or at (613) 957-1779, fax (613) 941-0596 and by email: biosafety_biosecurity@phac-aspc.gc.ca.

http://origin.phac-aspc.gc.ca/lab-bio/res/advi-avis/sbn-asb-2012-01-31-eng.php
 
Re: Man Made H5N1 - Super Version

Killer bug in the system

BY PHILLIP THOMSON
05 Feb, 2012 01:00 AM

THE CANBERRA scientist who argued against details of a new strain of potentially apocalyptic bird flu being published has warned of inadequate security at the lab where the virus was developed and says the virus should not have been developed at all.

Professor Ian Ramshaw also says the new airborne H5N1 virus, modified in a way many believe will transmit it more easily between humans, has not been researched in a laboratory with the highest possible security level.

''With research such as this you better be entirely sure the benefits outweigh the risks,'' Professor Ramshaw said.
...

''The question now has to involve what's going to happen with international controls,'' Professor Ramshaw said.

''Until now they [the international community] have essentially ignored the issue.''

Full text:
http://www.canberratimes.com.au/news/local/news/general/killer-bug-in-the-system/2443947.aspx

------------------------------------------------------
Professor Ian Ramshaw
Professor in Immunology
Centre for Research in Therapeutic Solutions
University of Canberra
ACT 2601 Australia

Education
PhD, Immunology, Australian National University, 1973
MSc, Brunel

Research and Professional Interests


Ian Ramshaw has developed a research career in immunology and the development of vaccines for infectious diseases such as HIV. He developed the prime boost immunisation strategy and cytokine co-expression, both of which have been in clinical trial for HIV-1 preventive and immunotherapeutic vaccines. He has also been studying the effect of co-expressing cytokine genes on the pathogenicity of viruses and published the seminal paper showing increased virulence of poxviruses expressing the gene for IL-4. This was the first example of a genetically manipulated organism showing increased virulence which brought to the fore the potential concerns of bioterrorism. His areas of expertise include:
  • Humoral Immunology And Immunochemistry
  • Genetic Immunology
  • Medical Biochemistry: Lipids
  • Immunogenetics (Incl. Genetic Immunology)
  • Medical Virology
  • Gene And Molecular Therapy
...
http://www.canberra.edu.au/faculties/science/staff/profiles/professor-ian-ramshaw
 
Re: Man Made H5N1 - Super Version

hat tip Michael Coston -

Monday, February 06, 2012

H5N1 Research: A Plethora Of Positions


image%25255B3%25255D.png

BSL-4 Lab Worker - Photo Credit ?USAMRIID

# 6123


While historically politics, religion, or sporting contests can be counted on as being the most divisive of subjects, over the past few months we?ve seen rise to a different bitter line of debate;

Under what circumstances should potentially dangerous life or bioscience research be conducted and/or published?
Although it has been simmering in the background for years, this issue came to the forefront several months ago when Ron Fouchier announced at a scientific conference in Malta that he?d successfully `mutated the hell? out of the H5N1 virus and turned it into a highly transmissible (and still lethal) virus in ferrets.

At the same time, in a different lab half a world away, virologist Yoshihiro Kawaoka accomplished very nearly the same feat, albeit without the high lethality seen in Fouchier?s ferrets.

In November alarm bells were raised by bio-terrorism experts, who warned that this information in the wrong hands could be catastrophic (seeNPR: Bio-Terrorism Concerns Over Bird Flu Research).
Last December, the NSABB - after reviewing the papers from both of these projects - recommended unanimously that key details on how they were conducted be redacted from the publically available journals.
And that has unleashed a firestorm of controversy.

You can find a nice recap of all of this by Debra MacKenzie in this morning?s edition of New Scientist (Doomsday flu decision time: The story so far).
Later this month, in a closed-door meeting in Geneva, a small, select group of scientists will gather to discuss this controversy. The hope is they will forward some recommendations on how to proceed for consideration by the greater international scientific community.

In the meantime, the media is filled with diverse opinions on this subject.

One of the more extreme views comes this morning via John Horgan writing for Scientific American. He gives his list of available options, and finds all of them lacking. He proposes that the `least bad? option is:


While at the far end of the spectrum in this debate, Horgan echoes many of the same sentiments as Tom Inglesby, Director of the Center for Biosecurity at the University of Pittsburgh Medical Center.

In a letter to the Editor of the New York Times, Inglesby recently argued:

The potential benefits of the research do not justify the potential dangers, so the research should be discontinued. While in almost all circumstances basic research should be fully disseminated in the science community, in this case the results should not be published in a way that allows them to be replicated by others. If allowed to continue, the research should be performed only in pursuit of concrete, urgent goals under international approval and the greatest possible safety conditions.
TOM INGLESBY
Baltimore, Jan. 24, 2012


The Director of Australia's National Centre for Biosecurity, Professor Ian Ramshaw, warned in an article yesterday in The Canberra Times that potentially dangerous H5N1 research is being conducted in labs with insufficient biosecurity measures, and even states that these mutated viruses should not have been created to begin with.


Killer bug in the system

BY PHILLIP THOMSON
05 Feb, 2012 01:00 AM
THE CANBERRA scientist who argued against details of a new strain of potentially apocalyptic bird flu being published has warned of inadequate security at the lab where the virus was developed and says the virus should not have been developed at all.
(Continue . . . )
A bit ironic, as Professor Ramshaw gained considerable notoriety a decade ago when he and his research team published details on how they created a new, and highly pathogenic form of mousepox.

Comparatively speaking, the above views make the recommendations of the NSABB appear almost centrist, as they only called for the redaction of key elements from two scientific papers, not for a ban into this type of research.

Surprisingly, an opinion published last week by none other than Robert G. Webster, considered to be one of the world?s foremost authorities on influenza, got very little mention in the press.


Mammalian-Transmissible H5N1 Influenza: the Dilemma of Dual-Use Research


  1. Robert G. Webster

While conceding that the details of how these two H5N1 experiments were conducted will likely leak out at some point, he nonetheless believes the details on how to create a transmissible H5N1 virus should not be published.

Webster believes this type of research must continue, but also worries that the lower biosecurity level labs (BSL-3) may not have adequate safety measures for containing H5N1.

He has a lot more to say, so by all means follow this link to read it in its entirety.

Last week, in an apparent response to the BSL-3 / BSL-4 debate, the Public Health Agency of Canada issued a Biosafety Advisory for working with transmissible strains of the H5N1 virus, relegating such work to their highest containment (CL-4) labs.

On the other end of the spectrum are researchers and scientists who believe that concerns over the biosafety aspects of these experiments are overblown, and that work on these viruses must continue and the results should be published in their entirety.

Virologist and blogger Professor Vincent Racaniello argues strenuously for this position in his recent mBio article:


Science Should Be in the Public Domain

Vincent R. Racaniello
Department of Microbiology and Immunology, Columbia University College of Physicians and Surgeons, New York, New York, USA
ABSTRACT

Variants of avian influenza H5N1 virus that are transmitted by the airborne route among ferrets have been identified. The National Science Advisory Board for Biosecurity has advised against publication of the details of the methods used to obtain these viruses and the amino acid changes that lead to transmission in ferrets. This decision is not based on sound scientific principles and risks setting a precedent that will make it easier to put in place highly restrictive regulations on scientific research and publication.
(Continue . . . )
And similarly, noted microbiologist Peter Palese, in an opinion piece recently published in PNAS ? argued:

H5N1 influenza viruses: Facts, not fear


Peter Palese 2. Taia T. Wang
Abstract
The ongoing controversy over publication of two studies involving the transmission in ferrets of H5N1 (H5) subtype influenza viruses and the recommendations of the National Science Advisory Board for Biosecurity to redact key details in the manuscripts call for an examination of relevant scientific facts. In addition, there are calls in the media to destroy the viruses, curtail future research in this area, and protect the public from such ?frightening? research efforts. Fear needs to be put to rest with solid science and not speculation.
(Continue . . . )
As a non-scientist, I must rely on the opinions and judgments of scientists I trust.

Here, that proves exceedingly difficult, as the range of opinion from people I highly respect covers the gamut ? from preserving the ideals of scientific and intellectual freedom . . . to an outright ban on conducting this type of research.
In this issue we have an honest disagreement among experts, and all sides have at least some solid ground to stand on. And no matter how diverse, I believe these opinions to be heartfelt and sincere.


We are on the cusp of a new era of life sciences, where scientists can manipulate and even create life forms in the laboratory. Although the potential for good that this research offers is immense, there is also the possibility of serious mishap as well.

While we are focused today on the fate of two H5N1 research papers, the real problem runs far deeper;

Our failure to anticipate and deal with the numerous ethical and practical issues that these new bioengineering sciences presents.
The Fouchier and Kawaoka papers have merely brought this issue to a head.

Whether these papers end up published in their entirety or not, the bigger issue is that the international scientific community must come up with a consensus over rules and guidelines for life sciences research.

Otherwise, these bitter debates will form an ongoing rift between scientists, and over time, further erode the public?s confidence in the scientific establishment.




Posted by Michael Coston at <a class="timestamp-link" href="http://afludiary.blogspot.com/2012/02/h5n1-research-plethora-of-positions.html" rel="bookmark" title="permanent link"><abbr class="published" title="2012-02-06T10:49:00-05:00">10:49 AM</abbr>
 
Re: How Dangerous is Bird Flu (H5N1) to Global Public Health? Part 2

Re: How Dangerous is Bird Flu (H5N1) to Global Public Health? Part 2

The H5N1 Research Publication Controversy

The debate continues to rage over whether or not the details of the laboratory-created virulent strain of H5N1 should be published (see this FluTrackers link for a full discussion). The heated exchange among the researchers raises many critical issues about scientific research and the protection of the public good.

But in my estimation this debate is a distraction from the real issue at hand - How can the world quickly and efficiently prepare for the next pandemic?

And there will be a next pandemic.

Governments and public health organizations need to focus on new production and delivery strategies for vaccine and encourage researchers to develop new drugs to replace neuraminidase inhibitors for when they are no longer effective. The 2009 H1N1 pandemic demonstrated how ill-prepared the world is to handle a pandemic. Lucky for us it was mild. We may not be so lucky if H5N1 goes pandemic.

Throughout history, humans have always taken the most recent scientific advances and turned then into weapons of death and destruction, starting with the invention of gun powder for fireworks in China in 9<sup>th</sup> century and continuing through the nuclear age in the 20<sup>th</sup> century with atomic bombs. Even today the world is wrestling with the issue of peaceful nuclear development versus atomic aggression. So the restriction of publication of the H5N1 research may delay, but will certainly not deter, the spread of the details to anyone determined to obtain them.

And the restriction of the data will not stop the next pandemic from occurring.

Once the next pandemic starts, it will not be important if it is a result a bioterrorist plot, a laboratory escape, or a virus born in the wild. What will be important is if the world is prepared for it.

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<w:LsdException Locked="false" Priority="31" SemiHidden="false" UnhideWhenUsed="false" QFormat="true" Name="Subtle Reference"/> <w:LsdException Locked="false" Priority="32" SemiHidden="false" UnhideWhenUsed="false" QFormat="true" Name="Intense Reference"/> <w:LsdException Locked="false" Priority="33" SemiHidden="false" UnhideWhenUsed="false" QFormat="true" Name="Book Title"/> <w:LsdException Locked="false" Priority="37" Name="Bibliography"/> <w:LsdException Locked="false" Priority="39" QFormat="true" Name="TOC Heading"/> </w:LatentStyles> </xml><![endif][if gte mso 10]> <style> /* Style Definitions */ table.MsoNormalTable {mso-style-name:"Table Normal"; mso-tstyle-rowband-size:0; mso-tstyle-colband-size:0; mso-style-noshow:yes; mso-style-priority:99; mso-style-parent:""; mso-padding-alt:0in 5.4pt 0in 5.4pt; mso-para-margin:0in; mso-para-margin-bottom:.0001pt; mso-pagination:widow-orphan; font-size:10.0pt; font-family:"Times New Roman","serif";} </style> <![endif]--> Let?s shift the focus of this debate from withholding research data to emphasizing the need for worldwide preparation for the next pandemic.
 
Re: Man Made H5N1 - Super Version

I thought it might be useful to summarise where we are at this time in relation to pandemic preparedness and interventions for a future H5N1 pandemic, and what issues remain outstanding. The purpose of this review is to highlight how very important continued research into H5N1 is along with research into new and effective countermeasures, and, how important it is that research continues; IMHO the world in not yet ready to deal with an H5N1 pandemic, and anything that can help to 'buy time' and delay or even prevent a pandemic H5N1 emergence should be welcomed. Again, in my opinion, what should be at issue here is not that the research occurs, but what safety measures are put into place to prevent an inadvertant escape and a proper system of evaluation of risks vs benefits of publication of some of the finer details.

What did we learn from the 2009 pandemic?

Vaccines
I would like to look at the issue of vaccines first; without doubt these are still the best defence we have against a hypervirulent influenza pandemic. However, there are significant issues associated with vaccine defences that were confirmed during the pH1N1 experience, despite the best efforts of all concerned...... whether that be WHO or CDC organisations all the way down to the research teams in the labs.

In summary, these learning points were

1. That vaccines cannot yet provide a global answer in the first year or more of a pandemic due to limited vaccine production capacities. Whilst the world has moved towards cell based production systems, these have had issues and are not yet fully on line or capable of addressing global demand in a short time scale.

See on pH1N1 experience http://www.flutrackers.com/forum/showpost.php?p=353361&postcount=3

2. We are still heavily dependent on egg based vaccine antigen production, which could be a critical issue in the event of an H5N1 pandemic, especially if any human strain is capable of infecting poutry and causing mass die - offs. Sterile egg production is limited at the best of times.

3. From the time of discovery of a pandemic virus it still takes time to reverse engineer the vaccine strain (@3m + - there were significant problems with developing a pH1N1 vaccine strain that would grow in eggs). To counter this the WHO develops H5N1 and other pandemic potential candidate seed vaccine strains; this is in the hope that ones developed ahead of time might be a good match for any emerging pandemic strain and so reduce these vaccine development times. However, if any emerging virus is significantly different to those identified for development as candidate seed vaccine strains, we will be at square one at the time of outbreak.

4. Production of meaningful quantities of vaccine cannot occur for 6 - 9 months after the emergence of a pandemic; by this time the first wave (and possibly a second or more) will have long passed by and done its damage.

5. Once vaccine development issues have been overcome, global annual capacity still has a significant shortfall. There are still the dilemmas presented by vaccine affordability, such that many poorer countries may never gain access to vaccine supplies once they are developed, or may not get sufficient supplies in any meaningful quantities to do much good for their populations. Only countries that can afford to enter into pandemic contracts (or have production capacity on thier territory) can guarantee 'early' (for that read within 12 months) and plentiful vaccine access, although measures have been put in place to reserve a proportion of pandemic vaccines for poorer countries

(see http://www.flutrackers.com/forum/showthread.php?t=166103).

Adjuvant use can stretch supplies further, but with the recent issues of pandemrix (an adjuvated pandemic vaccine) associated with development of auto-immune disease problems including narcolepsy (I suspect that we will see more auto-immune disease problems that will become visible over time as epidemiology crunches the numbers), such that their use in children and young adults should be questioned ... unless the pandemic is so severe that the benefits outweigh the risks, as was the case for pregnant women with pH1N1

6. If a significant mutation (an immune escape event) or a reassortment event occurs in any emerging pandemic virus, the world has to go back to square one all over again to develop a vaccine that can provide protection.


7. After the pH1N1 pandemic where the world responded as they would for a hypervirulent pandemic, for one that turned out to be 'mild/moderate' I question if there is a) the political will b) the economic will and c) willingness amongst vaccine manufacturers (after broken contracts etc) to make significant further progress to address these outstanding issues.


8. Vaccines, no matter how good a match they may be, are only as effective as their host's immune system capability to transfer vaccination into a long lasting immunity. As studies have repeatedly shown, even vaccines that are an immunogenic 'close match' still only produce immunity in @ 60% of vaccinated individuals aged 18 - 65. Studies have shown even lower levels of protection in older persons as immunosenescence sets in, as well as low protection levels in individuals with compromised immune systems.

In addition to the requirement of an adequate immune response at the time of vaccination to provide influenza immunity, it must also be remembered that even in individuals where vaccination has been effective, vaccination simply primes the immune system to respond to an infection before clinical symptoms set in. It cannot prevent the actual process of infection i.e invasion of virus into the body ... it just primes the bodys response so that the infection is countered rapidly. If this immune response is for any reason impeded, a symptomatic infection can and will still occur. This means that vaccines alone can never be a total global panacea; it is only one half of the equation with the other half being the individuals immune system health and functionality. I would like to look at this issue more in part 2.

My conclusion:[/B] Vaccines are a critical part of the armoury against influenza; however, during the first year or possibly more of a pandemic outbreak they have limited utility due to supply/ production time/ quantity issues.

So what is there that can fill this gap between a pandemic outbreak and vaccine availability/ effectiveness?

At the moment there is only one answer that is 'on the table' and that is oseltamivir or tamiflu. Why only tamiflu?

1. The amantane antivirals rapidly generate resistance in the influenza virus - a single individual will frequently develop a resistant strain over the course of a single infection. Many circulating pandemic candidate viruses already have the genetics that would confer resistance. This rules out 2 out of 4 currently available alternative anti-virals. The issues of resistance are well discussed in the full version of this paper

2. Relenza - the problem with this is it is an inhaled drug, and someone with ARDS or breathing problems is going to find it hard to inhale -a side and apart from producton issues.

3. Peramivir - this is an IV prep so its utility is limited to hospitals.

There is also Ribavirin, which is a highly effective anti-viral that is largely discounted for widespread human use due to its extremely high toxicity and resultant liver damage. This is why no-one seriously considers its widespread use in a pandemic response, even a severe pandemic.

Whilst there are many candidate antivirals in R&D, at the moment, this summarised all of our options for anti-viral drugs; whilst combination therapy could be effective in the short term, it would not be practical (supply/ costs) in a global severe pandemic, and studies indicate that combination use ultimately generates combination resistance.

But its OK isnt it? We still have tamiflu?

Well yes - but as we know from 2007/2008 season when seasonal H1N1 went from 0.1% baseline to 100% resistance in less than 6 months, it is not only likely but probable that widespread and uncontrolled tamiflu usage will produce a resistant substrain.

See http://www.ncbi.nlm.nih.gov/pubmed/21483816 for a study that examines the changes that were required to produce seasonal H1N1 taimflu resistance, and http://www.flutrackers.com/forum/showpost.php?p=381359&postcount=1 for further detail on the current evolution of multi-drug resistance.

Worse than this (with regard to H5N1) there is evidence in both Indonesia and elsewhere that resistance markers for tamiflu resistance are emerging in poultry strains that are infecting humans.

See http://www.flutrackers.com/forum/showthread.php?t=180322.

This raises the spectre of an H5N1 severe pandemic that is either partially or wholly resistant at, or shortly after, emergence. I am not saying that this WILL happen; just that there is a significant risk that it could, and as such, we should plan for this eventuality.

Despite some negative science, Tamiflu's use in human H5N1 cases has shown that it does save lives if used early, even if its justification for use in standard seasonal influenza is perhaps questionable. However, even if tamiflu remains 'the magic bullet' in terms of saving peoples lives in such a pandemic and resistance does not become an issue it has severe limitations:-

1. It must be adminstered early to be effective
2. There are supply/ demand issues
3. It is unaffordable for a very substantial part of the worlds population

So in summary, we are poorly prepared as things now stand. But what could be done? Part 2 to follow.
 
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Re: Man Made H5N1 - Super Version

did we learn this ?
Cell based vaccine was successfully produced in 2009,
but demand was not so high and eggbased vaccine
was cheaper.
I had been wondering since long, whether they could
produce more cellbased vaccine, if needed.
As they had told us in 2006, why we need cellbased.
And as makes sense, no shortage of eggs, just get
more bioreactors ?!?

Somewhere comes money into the game, as usual.


4.) for USA it was almost in time, some few weeks missing maybe. But there is
room for improvement.
A new pandemic often first shows up in ~April when the Northern winter (China ?) with seasonal
flu wanes. Well, Indonesia,Thailand,Vietnam are almost equator, no winter.

6.) the reassortment would have to be in HA , so a new pandemic inside the old one ?
If it replaces H5, we might be glad.
Vaccine escaping mutations in the first years of a pandemic were not seen before.
There is not much diversity in the pandemic strain to select from.
 
Re: Man Made H5N1 - Super Version

did we learn this ?
Cell based vaccine was successfully produced in 2009,
but demand was not so high and eggbased vaccine
was cheaper.
I had been wondering since long, whether they could
produce more cellbased vaccine, if needed.
As they had told us in 2006, why we need cellbased.
And as makes sense, no shortage of eggs, just get
more bioreactors ?!?

Somewhere comes money into the game, as usual.


4.) for USA it was almost in time, some few weeks missing maybe. But there is
room for improvement.
A new pandemic often first shows up in ~April when the Northern winter (China ?) with seasonal
flu wanes. Well, Indonesia,Thailand,Vietnam are almost equator, no winter.

6.) the reassortment would have to be in HA , so a new pandemic inside the old one ?
If it replaces H5, we might be glad.
Vaccine escaping mutations in the first years of a pandemic were not seen before.
There is not much diversity in the pandemic strain to select from.

Dr. R has some comments here about using egg vs cell based cultures for a pandemic bird flu vaccine:
http://www.virology.ws/2011/12/16/a-707-million-investment-in-cell-based-influenza-vaccine/
 
Re: Man Made H5N1 - Super Version

Vaccine escaping mutations in the first years of a pandemic were not seen before.

There is a school of thought that 'true' pandemic waves are caused by successive substrains and that each wave is caused by a slightly different (?reassorted? or mutated) virus. It is true that not every pandemic has produced multiple waves, and (as far as we can tell from historic epidemiology) some past pandemic waves have had an interval of a couple of years between them

This whole issue is still poorly understood by scientists.. so I dont think we can be this definitive in our statements just yet, as science has only recently (i.e in the last decade) developed gene sequencing capabilities that can clearly answer these questions. IMHO we have only had one (possibly two) 'true' pandemic waves with pH1N1 thus far, which is why I am waiting to see how pH1N1 behaves once it does mutate away from its current format to produce an immune escape event (as it surely will sooner or later) with a degree of interest.

Nor does immunogeneic escape rest wholly with the H gene configuration; if nothing else pH1N1 has taught us just how much we still dont know.
 
Re: Man Made H5N1 - Super Version

No way of stopping leak of deadly new flu, says terror chief

US biosecurity board expert warns against details of H5N1 bird flu getting into wrong hands

Steve Connor Wednesday 08 February 2012

...
Professor Paul Keim, chairman of the US National Science Advisory Board for Biosecurity, controversially recommended that researchers be stopped from publishing the precise mutations needed to transform the H5N1 strain of birdflu virus into a human-transmissible version.
...
In an exclusive interview with The Independent, he argued it had been necessary to limit the release of the scientific details because of fears that terrorists may use the information to create their own H5N1 virus that could be spread easily between people.

Professor Keim said that it was necessary to slow down the release of scientific information because it was clear that the world is not yet prepared for a strain of highly lethal H5N1 influenza that can be transmitted by coughs and sneezes.

“We recognised that, in the long term certainly, the information is going to get out, and maybe even in the mid term. But if we can restrict it in the short term and motivate governments to start getting busy in terms of building up the flu-defence infrastructure, then we’ve succeeded at a certain level,” he said.

“If we can slow down the release of the specific information that would enable somebody to reconstruct this virus and do something nefarious, even for a while, then that was a good thing.”

By withholding key details of the mutations needed to make an airborne strain of H5N1, this would give time for governments to prepare for and prevent a possible pandemic, he added.

“The infrastructure to stop a pandemic in this area is not there. We just don’t have the capabilities. The very first time we knew that the swine flu virus [coming out of Mexico] was there, it was already in 18 countries. I’m not confident at all that we have the surveillance capability to spot an emerging virus in time to stop it,” he said.

“And even if we did spot it early on, I don’t think we have sufficient vaccines. The vaccines aren’t good enough, and the drugs are not good enough to stop this emerging and being a pandemic.”

Full text:
http://www.independent.co.uk/news/s...deadly-new-flu-says-terror-chief-6660997.html
 
Re: Man Made H5N1 - Super Version

Professor Keim said that it was necessary to slow down the release of scientific information because it was clear that the world is not yet prepared for a strain of highly lethal H5N1 influenza that can be transmitted by coughs and sneezes.
Instead of recommending slowing down the release of information, perhaps Professor Keim should be recommending speeding up the preparations for the next pandemic.
 
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