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J Infect Chemother . Prolonged infective SARS-CoV-2 omicron variant shedding in a patient with diffuse large B cell lymphoma successfully cleared af

tetano

Editor, Senior Moderator
J Infect Chemother


. 2023 May 12;S1341-321X(23)00113-7.
doi: 10.1016/j.jiac.2023.05.003. Online ahead of print. Prolonged infective SARS-CoV-2 omicron variant shedding in a patient with diffuse large B cell lymphoma successfully cleared after three courses of remdesivir

Kiwamu Nakamura[SUP] 1 [/SUP], Masahiro Sugiyama[SUP] 2 [/SUP], Hikari Ishizuka[SUP] 3 [/SUP], Tomomi Sasajima[SUP] 4 [/SUP], Yoko Minakawa[SUP] 5 [/SUP], Hiroko Sato[SUP] 6 [/SUP], Masatsugu Miyazawa[SUP] 7 [/SUP], Kazuhiro Kitakawa[SUP] 8 [/SUP], Shohei Fujita[SUP] 9 [/SUP], Nozomi Saito[SUP] 10 [/SUP], Naoko Kashiwabara[SUP] 11 [/SUP], Hironobu Kohata[SUP] 12 [/SUP], Yasuka Hara[SUP] 13 [/SUP], Yumiko Kanari[SUP] 14 [/SUP], Toshikatsu Shinka[SUP] 15 [/SUP], Keiji Kanemitsu[SUP] 16 [/SUP]



Affiliations
Abstract

We report a case of prolonged shedding of the infective SARS-CoV-2 omicron variant BA.1.1.2 in a 79-year-old male patient with diffuse large B-cell lymphoma, after receiving chemotherapy with rituximab, cyclophosphamide, doxorubicin, vincristine, and prednisolone (R-CHOP). The patient was admitted to our hospital in late March 2022 for the sixth course of R-CHOP chemotherapy. Initially, the patient tested negative for severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) using an in-hospital loop-mediated amplification assay with a nasopharyngeal swab, both on the day of admission and three days later. However, the patient developed fever and was diagnosed with coronavirus disease (COVID-19) six days after admission and was suspected to have contracted the infection in the ward. Viral shedding continued for more than three months, with confirmed viral infectivity. As compared to the original Wuhan-Hu-1/2019 strain, amino acid substitutions including S36N in non-structural protein (NSP)2, S148P and SL1265I in NSP3, G105D in NSP4, G496S, A831V, or V987F in spike protein, and I45T in open-reading frame (ORF)9b were randomly detected in isolated viruses. Although the patient had received two doses of the BNT162b2 vaccine approximately six months earlier and the third dose on day 127 after the infection, both serum anti-spike and anti-nuclear protein IgG and IgM tests were negative at day 92, 114, and 149 after the infection. The patient finally cleared the virus after the third course of remdesivir and did not have further recurrence.

Keywords: BA.1.1.2; Diffuse large B cell lymphoma; Prolonged viral shedding; Remdesivir; Rituximab.

 
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