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Indonesian mutations in HA

gsgs

gsgs

Registered User
here a list of latest Indonesian HA-sequences, including the West-Java birds.
You can see the two big groups of human and avian sequences and
some smaller groups. Sequences which are identical to already included
sequences are omitted. All positions with at least 2 sequences different
from the standard are listed.
When someone wants to print the list with wordpad, send PM or email
for a printer-formatted list.


Code: 
standard..........................TGATTCCACACCTAGCGAACGCATCCATGCATCGGTCCGCCGAAGCTTCCTCCACATCCTGAAGTCCTGACAGACGAACTGTCTGCGCGGAGCCCGAACTTAGTACGAGGGCAAAGTGCGTATAACAAAGGTACCCGAGACTCTGAAGCAAAGAGACTTGAATTGCGGCCAATACACCGGAATATATGGCATCCATACACTTCAGCCGCCGGGGCTCTAAAGACAGTCAAGTAATCCCTGCAGGT
001 k/WestJava/GARUT-MAY/06/06    ...........T.............T.....C..A.T.............C..G.........CG..........A.G...........AGAT.....T.......A........C.......C.......C....A............GT...............A........G...............C.T.........................G..GTG.......G..T.........
002 Qa/CentralJava/SMRG/06        ...........T...T.........T.....C..A.T.............C..G.........CG..........A.G...........AGAT.....T.......A........T.......C.......C....A............GT...............A........G...............C.T......C..................G..GTG.......G..T.........
003 IDN/6/05                      ...........T...................C..A.T................G.........CG..........A.G...........AG.T....G.....C..A........T.......C.......C.................GT........A...............G...............C.T.........................G..GTG.......G..T...A.....
004 Ck/GunungKidul/BBVW/06        ...........T.G.................C..A.T................G.........CG..........A.G...........AG.T...GG.....C..A........T.......C.......C...............A.GT........A.G..A..........G...............C.TG........................G..GT........G......A.....
005 Ck/Madiun/BBVW1420/05         ...........T.........T.........C..A.T................G.........CG..........A.G...........AG.T....G.....C..A........T.......C.......C.................GT........A...............G...............C.T.........................G..GTG.C.....G..T...A.....
006 Ck/PakunBaru/BPPV-II/05       ..C.......T..........T......A...............A...........................A.......A..............A...................T..........................A..........C....................................G...................................CT....G............
007 Ck/MuraoJambi/BBPV-II/05      ..C.......T..........T......A...............A...................................A..............A...................T..........................A..........C....................................G...................................CT....G............
008 IDN/CDC624E/06                ..C.......T.................A...............A.....C.............................A..............A...................T.....................G...............C.............A......................G.T.G...............................CT....G...........C
009 IDN/CDC624/06                 ..C.......T.................A...............A.....C.............................A..............A...................T.....................G...............C.........K...A......................G.T.G...............................CT....G...........C
010 IDN/569H/06                   ..C.......T.................A...............A.....C.............................A..............A...................T.....................G...............C.............A......................G.T.G...............................CT....G..........--
011 IDN/CDC623/06                 ..C.........C.............G.A...............A....TC.............................A..............A...................T.....................................C........C....A...............G......G.T.G...................T...G.......CT....G............
012 Ck/WestJava/PWT-WIJ/06        ..C....................AA.G.A...T.......A..GA..GA...T..........................GA.T.AT.A.....T.A........C.....T...TT.A..............G..T.................C....................................G.T.....................T...........CT....G............
013 Ck/WestJava/SMI-CSLK-EB/06    ..C....................AA.G.A...T.......A..GA..GA...T..........................GA.T.AT.A.....TTA........C.....T...TT.A..............G..T.................C....................................G.T.....................T...........CT....G............
014 IDN/245H/05                   ..C.........................A...............A...................................A..............A..................CT.....................................C....................................G.T.....................T...........CT....G............
015 Ck/WestJava/TASIKSOB/06       .AC.........................A....A..........A...................................A..............A............A.....CT.....................................C....................................G.T.....................T...........CT....G............
016 IDN/304H/06                   ..C.........................A.G..A..........A...................................A..............A...............T..CT.....................................C....................................G.T.....................T..C........CT....G............
017 IDN/CDC326N/06                ..C.........................A....A..........A...................................A..............A..................CTC....................................C..........A.........................G.T...............T.....T.T.........CT....G............
018 IDN/283H/06                   ..C.........................A....A..........A...................................A..............A..................CTC....................................C..........A.........................G.T...............T.....T...........CT....G............
019 IDN/CDC326/06                 ..C.........................A....A..........A...................................A..............A..................CTC..........................C.........C..........A.........................G.T...............T.....T...........CT....G............
020 IDN/CDC329/06                 ..C.........................A....A..........A...................................A..............A..................CTC....................................C..........A.........................G.T...............T.....T...........CT....G............
021 IDN/286H/06                   ..C.........................A....A..........A...................................A..............A..................CTC...................................AC..........A.........................G.T...............T.....T...........CT....G............
022 IDN/292H/06                   ..C.........................A....A..T.......A...................................A..............A..................CTC....................................C..........A.........................G.T...............T.....T...........CT....G............
023 Feline/IDN/CDC1/06            ..C.........................A....A..........A...................................A.............TA..................CT.....................................C..........A.....G...................G.T...............T.....T...........CT....G............
024 Ck/WestJava/TASIK1/06         .AC.................A.......A....A..........A...................................A..............A..................CT.............A.......................C..........A.........................G.T...............T.....T...........CT....G............
025 IDN/CDC742/06                 ..C.........................A....A..........A...................................A..............A.........T........CT.....................................C....................................G.T.....................T...........CT....G............
026 IDN/239H/05                   ..C.........................A....A..........A...................................A..............A..................CT.....................................C.........C..........................G.T.....................T...........CT....G............
027 IDN/CDC582/06                 ..C.........................A...............A...................................A..............A..................GT.............A...T...................C......................T.............G.T.................................CT....G........GA..
028 MuscovyDk/Jakarta/HABWIN/06   ..C.........................A..........T.A..A...................................A..............A...................T.....................................C......................TT............G.T.................................CT....G....T....A..
029 IDN/CDC835/06                 ..C.........................A..........T....A...................................A..............A...................T.....................................C......................TT............G.T....................A.C..........CT.G..G.........A..
030 IDN/542H/06                   ..C.........................A..........T....A...................................A..............A...................T...A.................................C......................TT............G.T.................................CT.G..G.........A..
031 IDN/CDC610/06                 ..C.........................A..........T....A...................................A..............A...................T.....................................C......................TT............G.T.................................CT.G..G.........A..
032 IDN/CDC836/06                 ..C.........................A..........T....A...................................A..............A................G..T.....................................C.........C............TT............G.T...................A.............CT....G......A..A..
033 IDN/583H/06                   ..C.........................A..........T....A...................................A..............A................G..T.....................................C.........C............TT............G.T...................A.............CT....G......A..A.-
034 IDN/CDC940/06                 ..C.........................A..........T....A...................................A..C..A........A................G..T.....................................C.........C............TT............G.T...................A.............CT....G......A..A..
035 IDN/CDC759/06                 ..C.........................A..........T....A...................................A..........A...A................G..T.....................................C.........C............TT............G.T...................A.............CT....G......A..A..
036 IDN/CDC739/06                 ..C......G..................A..........T....A...................................A..............A................G..T.....................................C.........C............TT............G.T...................A.............CT....G......A..A..
037 IDN/CDC634/06                 ..C.........................A...............A...................................A..............A.....G.............T.....................................C......................T.............G.T.................................CT....G.........A..
038 IDN/CDC634P/06                ..C.........................A...............A...................................A..............A.....G.............T........G............................C......................T.............G.T.................................CT....G.........A..
039 IDN/CDC644T/06                ..C.........................A...............A...................................A..............A...................T........G............................C......................T.............G.T......T..........................CT....G.........A..
040 IDN/CDC644/06                 ..C.........................A...............A...................................A..............A...................T........G............................C......................T.............G.T......T..........................CT....G.........A..
041 IDN/567H/06                   ..C.........................A...............A...................................A..............A...................T........G............................C......................T.............G.T......T..................G.......CT....G.........A..
042 IDN/CDC699/06                 ..C......G..................A...............A.....................T..........C..A.T............A...................T......................A..............C.T..C.................T.............G.T..........G......................CT....G.........A..
043 IDN/604H/06                   ..C.........................A...............A.....................T..........C..A.T............A...................T......................A..............C.T..C.................T.............G.T..........G......................CT....G.........A..
044 IDN/CDC887/06                 ..C....................C....A...................................................A...AA.........A...................A.....................................C.T.............T......T.............G.T...........A.T...................CT....GG....C...A..
045 IDN/CDC938/06                 ..C....................C....A...................................................A...AA.........A...................A..............A......................C.T.............T......T.............G.T.............T...................CT....GG....C...A..
046 IDN/CDC523/06                 A.C.........................A...............A.................................Y.A...A..........A...................T.....................................C.T....................T.............G.T.................................CT....GG........A..
047 IDN/CDC523E/06                A.C.........................A...............A...................................A...A..........A...................T.....................................C.T....................T.............G.T.................................CT....GG........A..
048 Qa/Jakarta/JU1/06             ..C.........................A...............A................G.........G........A........A.....A...................T.....................................C..............T.......T..A..........G.T............................A....CT....G.........A..
049 Ck/WestJava/TASIKSOL/06       ..C.........................A...............A..........................G........A..............A...................T.....................................C..............T.......T.............G.T.................................CT....G.........A..
050 IDN/298H/06                   ..C..T......................A...............A...................................A..............A...................T.....................G...............C...C.............................A..G.T....................A............CT....G..T......A..
051 Ck/WestJava/SMI-ENDRI1/06     ..C..............G.T........A...............A.......T...........................A....A.........A.C...........A.....T...............................A.....C....................................G.T..............................T..CT....G.........A..
052 IDN/341H/06                   ..C..............G.T........A...............A.............T.................G...A..............A.C.................T...............................A.....C..........................G.........G.T.................................CT....G.........A..
053 IDN/CDC390/06                 ..C.............A..T........A...............A.............T.................G...A..............A.C.................T...............................A.....C..........................G.........G.T.................................CT....G.........A..
054 IDN/CDC370T/06                ..C.............A..........CA...............A...................................AC.............A...................T..................T..................C.......T.....................G......G.T.................................CT....G.........A..
055 IDN/CDC370/06                 ..C.............A...........A...............A...................................AC.............A...................T..................T..................C.......T.....................G......G.T.................................CT....G.........A..
056 IDN/5/05                      ..C.........................A...............A...................................A..............A...................T.....................................C....................................G...................................CT....G............
057 IDN/195H/05                   ..C.........................A...............A...................................A....T.........A...................T.....................................C.............A......................G...................................CT....G............
058 IDN/160H/05                   ..C.....T.............G.....A.........................T......T.......................G.........A...................T....................................AC............A...G...................G........................C.........A...................
059 IDN/CDC7/05                   ..C.....T...................A.........................T......T...T.............................A...................T............G.......................AC............................C.......G..............A.........C.....A...A...................
060 IDN/7/05                      ..C.....T...................A.........................T......T...T.............................A.........T.........T............G.......................AC............................C.......G..............A.........C.....A...A...................
061 IDN/175H/05                   ..C.....T...................A.G..............................T.................................A...................T.....G...................A..........AC...............................G....G..............A.........C.............................
062 Dk/Indramayu/BBPW109/06       ..C.....T......T............A.....................C..........T.................................A...................T.........................A..........AC....................................G........................C.............................
063 Dk/Parepare/BBVM/05           ..................................................C...................A.............................C...........................G....T...............................................................................................................
064 Ck/Wajo/BBVM/05               ....................T.............................C...................A.............................C...........................G....T............................................A..................................................................
065 Ck/Papua/TA5/06               ...........T....A.................................C...............T...A.............................C......G.A........T.........G....T...............................................................................................................
066 Ck/IDN/CDC24/05               ........................................................C...............A.............A..A........T.C..................................................G...........................A..........................T.............................T........
067 Ck/BandarLampung/BBPVIII/06   .......................................................TC...............A.............A..A........T.C..................................................G......................................................T.............G...............T........
068 Ck/WayKanan/BBPVIII/06        ........................................................C...............A.............A..A........T.C..................................................G......................................................T.............G......T........T........
069 Ck/Sembawa/BPPV-III/05        ........................................................C...............A.............A..A........T.C..................................................G.............T........................................T.............G...............T........
070 Ck/Palembang/BPPV-III/05      ..............A.........................................C...............A.............A..A........T.C................................T.................G.............T........................................T.............G...............T........
071 Ck/IDN/Wates130/05            ..........................G...................................................................T.....C............G.............G..........................................................C.................................................T........
072 Ck/IDN/Wates126/05            .........................................................................................A....T.....C............GG............G.....................................................................................................................
073 Ck/GunungKidal/BBVW/05        ..............................................................................................T.....C............G.............G.....................................................................................................................
074 Ck/IDN/Wates1/05              .......................................................T......................................T.....C............G.............G................................................................................................................T....
075 Ck/Magetan/BBVW/05            .......................................................T......................................T.....C............G.............G................................................................................................................T....
076 Ck/Purworejo/BBVW/05          ............C..............C.T.......................G..........G............GT........................C......................................................G................G...............C.....................................................
077 Ck/Yogjakarta/BBVet-IX/04     ...................................................T.G..........GT..A.....T..G.............A.........................................................G..........G..............................C.........C...........................................
078 Qa/Boyolali/BPPV4/04          ..................................A..................G..........GT...........G.......................................................................G.........................................C.....................................................
079 Ck/KulonProgo/BBVet-XII-1/04  ...........T......................A........G..C....T.G.........CGT...........G..A..................G..........A......................................GT...-....................G...............C.T...............................A..G................
080 Ck/IDN/Wates80/05             ....C.............G.A.............A..T........C.................GT...........G................................A..........G........A..................GT........................G.....G.........C.T.............A.....................................
081 Ck/Kupang-1-NTT/BPPV6/04      ....C.............G...............A...........C......G..........GT...........G.....C...........A..T...........A......................................GT........................G.....G.........C.T.............A.....................................
082 Ck/Langkat/BBPV1-576/05       ...CC.........................G...A.....T....A......TG..........GT......A....G........A......T...........T....A......................................GT........A...............G............AT.C.T.A.TG................C..................AT.........
083 IDN/560H/06                   ...CC.........................G...A.....TAC..A......TG..........GT.C....A....G........A.......T..........T....A..............AT.....G............G...GT........AG..............G........C.C.AT.C.T.A.TG...T...T..T.....CT..............C..CT.........
084 IDN/CDC595/06                 ...CC.........................G...A.....TAC..A......TG..........GT.C....A....G........A.......T..........T....A..............AT.....G............G...GT........AG..............G........C...AT.C.T.A.TG...T...T..T.....CT..............C..CT.........
085 IDN/534H/06                   ...CC.........................G...A.....TAC..A......TG..........GT.C....A....G........A.......T..........T....A..............AT.....G............G...GT........AG..............G........C...AT.C.T.A.TG...T...T..T.....CT..............C..CT.........
086 IDN/CDC625/06                 ...CC.........................G...A.....TAC..A......TG..........GT.C....A....G........A.......T..........T....A..............AT.....G............G...GT........AG..............G........C...AT.C.T.A.TG...T...T..T.....CT..............C..CT.........
087 Dk/Madiun/BBVW1358/05         ...CC.........................G...A.....TAC..A......TG..........GT.C....A....G........A.......T..........T....A..............AT.....G............G..TGT........AG..............G........C...AT.C.T.A.TG...T...T..T.....CT..............C..CT.........
088 Turkey/Langkat/BBPVI/05       ...CC.........................G...A.....T....A......TG..........GT......A....G........A..................T....A.....................G................GT...A....A...............G............AT.C.T.A.TG................C..................CT.........
089 Ck/Dairi/BPPVI/05             ....C.........................G...A.....T....A......TG..........GT...........G........A..................T...........................................GT........A...............G............AT.C.T.A.T.................C..................CT.........
090 Ck/DeliSerdang/BPPVI/05       ....C.........................G...A.....T...........TG..........GT...........G........A..................T............T..............................GT........A...............G............AT.C.T.A.T.................C..................CT.........
091 Ck/TebingTinggi/BPPVI/05      ....C.........................G...A.....T........T..TG..........GT...........G........A..................T............T..............................GT........A...............G............AT.C.T.A.T.................C..................CT.........
092 Ck/Taput/BBPV1-576/05         ....C.........................G...A.....T........T..TG..........GT...........G...C....A..................T............T..............................GT........A...............G............AT.C.T.A.T...CT............C..................C..........
093 Ck/DeliDerdang/BBPVI/05       ....C.........................G...A.....T...........TG..........GT...........G........A..................T............T..............................GT........A...............G.....G......AT.C.T.A.T.................C..................CT.........
094 Ck/Tarutung/BPPVI/05          ....C...............A.........G...A.....T...........TG..........GT...........G........A..................T............T..............................GT........A...............G............AT.C.T.A.T.................C..................CT.........
095 Ck/DeliSerdang/BPPV1/05       ....C.........................G...A.....T...........TG..........GT...........G........A..................T............T.....................T........GT........A...............G..A.........AT.C.T.A.T.......T.........C..................CT.........
096 Ck/Medan/BPPV1-534/05         ....C.........................G...A.....T...........TG..........GT...........G........A..................T............T.....................T........GT........A...............G..A.........AT.C.T.A.T.......T.........C..................CT.........
097 Ck/Medan/BBPV1-571/05         ....C.........................G...A.....T...........TG..........GT...........G........A.A..............C.T............T..............................GT........A...............G..A.........AT.C.T.A.T...........T.....C..................CT.........
098 Ck/Pidie/BPPV1/05             ....C.........................G...A.....T...........TG..........GT...........G........A..................T............T..............................GT........A...............G..A.........AT.C.T.A.T.................C..................CT.........
099 Ck/Karo/BBPVII/06             ....C.........................G...A.....T..........TTG..........GT...........G........A..................T............T..............................GT........A...............G..A.........AT.C.T.A.T.................C.........A........CT.........
100 Ck/Medan/BPPV1-498/05         ....C.........................G...A.....T...........TG..........GT...........G........A..................T............T.........................A...TGT........A...............G............AT.C.T.A.T......A..........C..................CT.........
101 Ck/Medan/BBPV1-576/05         ....C.................G.......G...A.....T...........TG..........GT...........G........A..................T............T.........................A...TGT........A...............G....G.......AT.C.T.A.T......A..........C..................CT.........
102 Ck/Agam/BBPVI/05              ....C.........................G...A.....T...........TG..........GT...........G........A............A.....T...........................................GT........A...............G.......G....AT.C.T.A.T.................C..................CT.........
103 Ck/Padang/BBPVII/06           ....C.........................G...A.....T...........TG..........GT...........G........A............A.....T...........................................GT........A...........G...G.......G....AT.C.T.A.T.................C..................CT.........
104 Ck/Duma/BBPV-II/05            ....C.........................G...A.....T...........TG..........GT..A........G........A............A.....T...........................................GT........A...........G...G.......G....AT.C.T.A.T.................C..................CT.....G...
105 Ck/PulauRampang/BBPVII/06     ....C.........................G...A.....T...........TG..........GT...........G........A..................T...........................................GT........A...........G...G.......G....AT.C.T.A.T.................C..................CT.........
106 Ck/Simalanggang/BPPVI/05      ....C.........................G...A.....T...........TG..........GT...........G........A..................T...........................................GT...A....A...........G...G.......G...AAT.C.T.A.T.................C..................CT.........
107 Ck/IDN/Wates77/05             ..............A...................A..................G......A...GT...........G........A.....T............T..A........................................GT...A....................G.............T.C.T..G.....T.........................G......T.........
108 Ck/IDN/Wates83/05             ..................................A..................G......A...GT........T..G........A..................T..A........................................GT...-..C.................G.............T.C.T..G.....T................................T.........
109 Ck/Salatiga/BBVet-I/05        ..................................A..................G..........GT.......T...G........A..................T...................................C.......GT.............A..........G.............T.C.T........T................................T.........
110 Ck/Pangkalpinang/BPPV3/04     ..................................A..................G..........GT.......G...G........A..................T...........................................GT........................G...............C.T.......................................G.T.........
111 turkey/Kedaton/BPPV3/04       ..................................A..T...............G.........AGT.......G...G...........................T..........................................TGT........................G...............C.T..................................G......T.........
112 Ck/Malang/BBVet-IV/04         ..................................A..................G.....A...AGT.......G...G........A................................................T............TGT..........G.............G...............C.T...................................................
113 Ck/IDN/R60/05                 ..................................A.............A....G...T....GA.........G...GTC.C...A................A.....A......A....C.............T..............GT..G.....................G............A..C.T.....................AT............................
114 Ck/Ngawi/BPPV4/04             ..................................A..................G.....A...AG...A....G...G................................A......................................GT........................G...............C.T......................T............................
115 Ck/IDN/BL/03                  ..................................A..................G.....A...AGT.......G...G................................A......................................GT........................G...............C.T...................................................
116 Ck/Sragen/BPPV4/03            .....................T............A..................G.....A...AGT.......G...G.................A......A.......A......................................GT........................G......C........C.T...................................................
117 Ck/IDN/7/03                   .....................T............AC..A..............G.....A...AGT.......G...G..............................A.................T......................GT......................G.G...............C.T....................................A..............
118 Qa/Tasikmalaya/BPPV4/04       ..................................AC..A..............G.....A...AGT.......G...G..............................A.................T......................GT......................G.G...............C.T...................A................A..............
119 Ck/Bantul/BBVet-I/05          ..................................A..................G.....A...AGT...........G................................A......................................GT........................G...............C.T...................................................
120 Ck/IDN/5/04                   ..................................A..................G.....A...AGT...........G................................A......................................GT........................G...............C.T...................................................
121 Ck/IDN/2A/03                  ..................................A..................G.....A...AGT...........G........A.......................A......................................GT................A......TG...............C.T...................................................
122 Dk/IDN/MS/04                  ..................................A..................G.....A...AGT.......G...G........A.......................AT.....................................GT................A......TG...............C.T...................................................
123 Dk/Tabanan/BPPV1/05           ......A.T....................T...AA..T..............TG.....A..CAGT...G...G...G..........A..A..................A...........C.......................G..GT.....T.......A.........TG...............C.T................AA...............................T.
124 Dk/Pali/BBVW1358/05           C.....A......................T...AA.................TG.....A..CAGT...G...G...G..A.......A.......G.............A...G.......C..........T.....G.....GG..GT.....T.......A.........TG...............C.T................AA.................................
125 Dk/Bufeleng/BPPV1/05          C.....A......G...............T...AA.................TG.....A..CAGT.......G...G..........A.....T...............A........AC.C................G......G..GT.............A.........TT.........G.....C.T................AA..............A.G..............T.
126 Ck/Pekalongan/BPPV4/03        ..................................A..................G...T.A...CGT.......G...G............................................C..........................GT........................G...............C.T...................................................
127 Ck/Wonosobo/BPPV4/03          .......G..T.......................A.........A........G.....A...AGT.......G...G.......................................................................GT...........C............G...............C.T...........................................T.......
128 Ck/WestJava/HAMD/06           .....T.G..........................A..................G.....A...AGT...........G.............................G..............................T..........GT.......G................G...............C.T......C................C....T......................
129 Ck/IDN/11/03                  .....T............................A..................G.....A...AGT.......G...G.............................G.........................................GT........................G...............C.T......C............................................
130 Ck/IDN/4/04                   ..................................A..................G....TA...AGT...........G.......................................................................GT.....................C..G...............C.T.............................T.....................
131 Ck/IDN/PA/03                  ..................................A..................G.....A...AGT.......G...G.................................................................C.....GT.....................C..G...............C.T...................................................
 
Re: Indonesian mutations in HA

gsgs, I believe some of the human sequences are mutiple samples from the same individual. Here is my list of the correlation of CDC sequences with those generated in Indonesia for 11 individuals.

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Re: Indonesian mutations in HA

Ck/West Java/SMI-ENDRI1/06 and CDC390,341H (27F,West Java) is a match
also different from other viruses in the database.
The muscovy duck and CDC610(12M,East Jakarta) are also closely related,
CDC835,CDC836,CDC940,CDC759,CDC739 also in that group.

Ck/Madiun/BBVW1420/05 very good match with IDN/6/05 in the Java-Madiun-group.

6 groups:
2 big groups : "human" and "avian"
4 smaller groups : 6/05 , Wajo , Sembawa , Magetan

the "avian" group mostly consists of a Sumatra subgroup with Karo and a "early"(2003) subgroup.
Not so clearly defined subgroups in the "human" group, all from Java, I assume.
Maybe CDC329,CDC836,CDC624,5/05 as representants of such subgroups.

Maybe only the "human" group is dangerous for humans or for some reason humans
don't come into contact with the other groups.
2 exceptions: Karo-cluster which is in the "avian" group, but quite some extra
mutations, no similar bird samples. Other exception is IDN/6/05 in the upper part.

--------------------------------
looking at it again, I'd like to regroup a bit.
The IDN/6/05 should be put into the "avian" group ,
and the Wajo,Sembawa,Magetan joined into another group, called "Parepare".
Leaving 3 Indonesian (main-)groups for HA.
The "avian" group looks similar to Qinghai and was probably introduced
in 2003 in Indonesia from a similar HA, which created the Qinghai strain in 2005.
The "human" and "Parepare" groups might have been introduced independently
from other viruses from China, I haven't yet examined, which.
And remember, this is only for HA. There had been several reassortments
in China and recently also one in Indonesia.
 
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