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Eurosurv. Molecular epidemiology of the SARS-CoV-2 variant Omicron BA.2 sub-lineage in Denmark, 29 November 2021 to 2 January 2022

tetano

Editor, Senior Moderator
Jannik Fonager[SUP]1,*[/SUP] , Marc Bennedbæk[SUP]1,*[/SUP] , Peter Bager[SUP]2[/SUP] , Jan Wohlfahrt[SUP]3[/SUP] , Kirsten Maren Ellegaard[SUP]4[/SUP] , Anna Cäcilia Ingham[SUP]4[/SUP] , Sofie Marie Edslev[SUP]4[/SUP] , Marc Stegger[SUP]4[/SUP] , Raphael Niklaus Sieber[SUP]4[/SUP] , Ria Lassauniere[SUP]1[/SUP] , Anders Fomsgaard[SUP]1[/SUP] , Troels Lillebaek[SUP]5,6[/SUP] , Christina Wiid Svarrer[SUP]4[/SUP] , Frederik Trier Møller[SUP]7[/SUP] , Camilla Holten Møller[SUP]2[/SUP] , Rebecca Legarth[SUP]2[/SUP] , Thomas Vognbjerg Sydenham[SUP]8[/SUP] , Kat Steinke[SUP]8[/SUP] , Sarah Juel Paulsen[SUP]9[/SUP] , José Alfredo Samaniego Castruita[SUP]9[/SUP] , Uffe Vest Schneider[SUP]9[/SUP] , Christian Højte Schouw[SUP]10[/SUP] , Xiaohui Chen Nielsen[SUP]10[/SUP] , Maria Overvad[SUP]7[/SUP] , Rikke Thoft Nielsen[SUP]7[/SUP] , Rasmus L Marvig[SUP]11[/SUP] , Martin Schou Pedersen[SUP]12[/SUP] , Lene Nielsen[SUP]13[/SUP] , Line Lynge Nilsson[SUP]13[/SUP] , Jonas Bybjerg-Grauholm[SUP]14[/SUP] , Irene Harder Tarpgaard[SUP]15[/SUP] , Tine Snejbjerg Ebsen[SUP]15[/SUP] , Janni Uyen Hoa Lam[SUP]7[/SUP] , Vithiagaran Gunalan[SUP]1,**[/SUP] , Morten Rasmussen[SUP]1,[/SUP]


Following emergence of the SARS-CoV-2 variant Omicron in November 2021, the dominant BA.1 sub-lineage was replaced by the BA.2 sub-lineage in Denmark. We analysed the first 2,623 BA.2 cases from 29 November 2021 to 2 January 2022. No epidemiological or clinical differences were found between individuals infected with BA.1 versus BA.2. Phylogenetic analyses showed a geographic east-to-west transmission of BA.2 from the Capital Region with clusters expanding after the Christmas holidays. Mutational analysis shows distinct differences between BA.1 and BA.2.

full article

https://www.eurosurveillance.org/content/10.2807/1560-7917.ES.2022.27.10.2200181#html_fulltext
 
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