Re: DISCUSSION - Hanut, Gharbiyah, Egypt - 12/23+
AlaskaDenise said:
from the latest Bloomberg story at
http://www.flutrackers.com/forum/showthread.php?t=14544
What is the further testing at another lab &
which lab? Didn't NAMRU-3 release the sequence to GENBANK in prior cases?
.
Most of the HA sequences from Egypt are from NAMRU-3. However, some sequences (ISDN numbered) are from WHO H5 group (Weybridge) and one is from the Capua lab, sequenced at TIGR:
<TABLE class=resultstable cellSpacing=0 cellPadding=4 width="100%" border=0><TBODY><TR bgColor=#a7c4ef><TD align=left><INPUT onclick=setAll(this.checked) type=checkbox value=140062 name=checkbox> </TD><TD class=displaytablerow align=left></TD><TD>
ISDN140062 </TD><TD>A/chicken/Egypt/1/2006 </TD><TD>HA (4) </TD><TD>
1671 </TD><TD>2006 </TD><TD>H5N1 </TD><TD></TD></TR><TR bgColor=white><TD align=left><INPUT onclick=setAll(this.checked) type=checkbox value=217553 name=checkbox> </TD><TD class=displaytablerow align=left></TD><TD>
EF042622 </TD><TD>A/chicken/Egypt/10845-NAMRU3/2006 </TD><TD>HA (4) </TD><TD>
1596 </TD><TD>2006 </TD><TD>H5N1 </TD><TD></TD></TR><TR bgColor=#a7c4ef><TD align=left><INPUT onclick=setAll(this.checked) type=checkbox value=140063 name=checkbox> </TD><TD class=displaytablerow align=left></TD><TD>
ISDN140063 </TD><TD>A/chicken/Egypt/2/2006 </TD><TD>HA (4) </TD><TD>
1700 </TD><TD>2006 </TD><TD>H5N1 </TD><TD></TD></TR><TR bgColor=white><TD align=left><INPUT onclick=setAll(this.checked) type=checkbox value=186854 name=checkbox> </TD><TD class=displaytablerow align=left></TD><TD>
DQ862001 </TD><TD>A/chicken/Egypt/2253-1/2006 </TD><TD>HA (4) </TD><TD>
1707 </TD><TD>2006 </TD><TD>H5N1 </TD><TD></TD></TR><TR bgColor=#a7c4ef><TD align=left><INPUT onclick=setAll(this.checked) type=checkbox value=140049 name=checkbox> </TD><TD class=displaytablerow align=left></TD><TD>
ISDN140049 </TD><TD>A/chicken/Egypt/3/2006 </TD><TD>HA (4) </TD><TD>
1698 </TD><TD>2006 </TD><TD>H5N1 </TD><TD></TD></TR><TR bgColor=white><TD align=left><INPUT onclick=setAll(this.checked) type=checkbox value=185847 name=checkbox> </TD><TD class=displaytablerow align=left></TD><TD>
DQ837587 </TD><TD>A/chicken/Egypt/5610NAMRU3-F3/2006 </TD><TD>HA (4) </TD><TD>
1595 </TD><TD>2006 </TD><TD>H5N1 </TD><TD></TD></TR><TR bgColor=#a7c4ef><TD align=left><INPUT onclick=setAll(this.checked) type=checkbox value=185848 name=checkbox> </TD><TD class=displaytablerow align=left></TD><TD>
DQ837588 </TD><TD>A/chicken/Egypt/5611NAMRU3-AN/2006 </TD><TD>HA (4) </TD><TD>
1613 </TD><TD>2006 </TD><TD>H5N1 </TD><TD></TD></TR><TR bgColor=white><TD align=left><INPUT onclick=setAll(this.checked) type=checkbox value=185849 name=checkbox> </TD><TD class=displaytablerow align=left></TD><TD>
DQ837589 </TD><TD>A/chicken/Egypt/5612NAMRU3-S/2006 </TD><TD>HA (4) </TD><TD>
1604 </TD><TD>2006 </TD><TD>H5N1 </TD><TD></TD></TR><TR bgColor=#a7c4ef><TD align=left><INPUT onclick=setAll(this.checked) type=checkbox value=138808 name=checkbox> </TD><TD class=displaytablerow align=left></TD><TD>
DQ447199 </TD><TD>A/chicken/Egypt/960N3-004/2006 </TD><TD>HA (4) </TD><TD>
1673 </TD><TD>2006 </TD><TD>H5N1 </TD><TD></TD></TR><TR bgColor=white><TD align=left><INPUT onclick=setAll(this.checked) type=checkbox value=186855 name=checkbox> </TD><TD class=displaytablerow align=left></TD><TD>
DQ862002 </TD><TD>A/duck/Egypt/2253-3/2006 </TD><TD>HA (4) </TD><TD>
1707 </TD><TD>2006 </TD><TD>H5N1 </TD><TD></TD></TR><TR bgColor=#a7c4ef><TD align=left><INPUT onclick=setAll(this.checked) type=checkbox value=212298 name=checkbox> </TD><TD class=displaytablerow align=left></TD><TD>
CY016899 </TD><TD>A/duck/Egypt/2253-3/2006 </TD><TD>HA (4) </TD><TD>
1743 </TD><TD>2006 </TD><TD>H5N1 </TD><TD></TD></TR><TR bgColor=white><TD align=left><INPUT onclick=setAll(this.checked) type=checkbox value=215628 name=checkbox> </TD><TD class=displaytablerow align=left></TD><TD>
EF061116 </TD><TD>A/Egypt/12374-NAMRU3/2006 </TD><TD>HA (4) </TD><TD>
1639 </TD><TD>2006 </TD><TD>H5N1 </TD><TD></TD></TR><TR bgColor=#a7c4ef><TD align=left><INPUT onclick=setAll(this.checked) type=checkbox value=217091 name=checkbox> </TD><TD class=displaytablerow align=left></TD><TD>
EF042614 </TD><TD>A/Egypt/2763-NAMRU3/2006 </TD><TD>HA (4) </TD><TD>
1596 </TD><TD>2006 </TD><TD>H5N1 </TD><TD></TD></TR><TR bgColor=white><TD align=left><INPUT onclick=setAll(this.checked) type=checkbox value=139393 name=checkbox> </TD><TD class=displaytablerow align=left></TD><TD>
DQ464377 </TD><TD>A/Egypt/2782-NAMRU3/2006 </TD><TD>HA (4) </TD><TD>
1640 </TD><TD>2006 </TD><TD>H5N1 </TD><TD></TD></TR><TR bgColor=#a7c4ef><TD align=left><INPUT onclick=setAll(this.checked) type=checkbox value=217092 name=checkbox> </TD><TD class=displaytablerow align=left></TD><TD>
EF042615 </TD><TD>A/Egypt/2783-NAMRU3/2006 </TD><TD>HA (4) </TD><TD>
1596 </TD><TD>2006 </TD><TD>H5N1 </TD><TD></TD></TR><TR bgColor=white><TD align=left><INPUT onclick=setAll(this.checked) type=checkbox value=217093 name=checkbox> </TD><TD class=displaytablerow align=left></TD><TD>
EF042616 </TD><TD>A/Egypt/2786-NAMRU3/2006 </TD><TD>HA (4) </TD><TD>
1596 </TD><TD>2006 </TD><TD>H5N1 </TD><TD></TD></TR><TR bgColor=#a7c4ef><TD align=left><INPUT onclick=setAll(this.checked) type=checkbox value=217094 name=checkbox> </TD><TD class=displaytablerow align=left></TD><TD>
EF042617 </TD><TD>A/Egypt/2947-NAMRU3/2006 </TD><TD>HA (4) </TD><TD>
1596 </TD><TD>2006 </TD><TD>H5N1 </TD><TD></TD></TR><TR bgColor=white><TD align=left><INPUT onclick=setAll(this.checked) type=checkbox value=217095 name=checkbox> </TD><TD class=displaytablerow align=left></TD><TD>
EF042618 </TD><TD>A/Egypt/3105-NAMRU3/2006 </TD><TD>HA (4) </TD><TD>
1596 </TD><TD>2006 </TD><TD>H5N1 </TD><TD></TD></TR><TR bgColor=#a7c4ef><TD align=left><INPUT onclick=setAll(this.checked) type=checkbox value=217097 name=checkbox> </TD><TD class=displaytablerow align=left></TD><TD>
EF042619 </TD><TD>A/Egypt/3458-NAMRU3/2006 </TD><TD>HA (4) </TD><TD>
1596 </TD><TD>2006 </TD><TD>H5N1 </TD><TD></TD></TR><TR bgColor=white><TD align=left><INPUT onclick=setAll(this.checked) type=checkbox value=217096 name=checkbox> </TD><TD class=displaytablerow align=left></TD><TD>
EF042620 </TD><TD>A/Egypt/5494-NAMRU3/2006 </TD><TD>HA (4) </TD><TD>
1596 </TD><TD>2006 </TD><TD>H5N1 </TD><TD></TD></TR><TR bgColor=#a7c4ef><TD align=left><INPUT onclick=setAll(this.checked) type=checkbox value=217098 name=checkbox> </TD><TD class=displaytablerow align=left></TD><TD>
EF042621 </TD><TD>A/Egypt/5614-NAMRU3/2006 </TD><TD>HA (4) </TD><TD>
1596 </TD><TD>2006 </TD><TD>H5N1 </TD><TD></TD></TR><TR bgColor=white><TD align=left><INPUT onclick=setAll(this.checked) type=checkbox value=140050 name=checkbox> </TD><TD class=displaytablerow align=left></TD><TD>
ISDN140050 </TD><TD>A/Egypt/902782/06 </TD><TD>HA (4) </TD><TD>
1692 </TD><TD>2006 </TD><TD>H5N1 </TD><TD></TD></TR><TR bgColor=#a7c4ef><TD align=left><INPUT onclick=setAll(this.checked) type=checkbox value=140051 name=checkbox> </TD><TD class=displaytablerow align=left></TD><TD>
ISDN140051 </TD><TD>A/Egypt/902786/06 </TD><TD>HA (4) </TD><TD>
1686 </TD><TD>2006 </TD><TD>H5N1 </TD><TD></TD></TR><TR bgColor=white><TD align=left><INPUT onclick=setAll(this.checked) type=checkbox value=185850 name=checkbox> </TD><TD class=displaytablerow align=left></TD><TD>
DQ837590 </TD><TD>A/turkey/Egypt/5613NAMRU3-T/2006 </TD><TD>HA (4) </TD><TD>
1603 </TD><TD>2006 </TD><TD>H5N1 </TD><TD></TD></TR><TR bgColor=#a7c4ef><TD align=left><INPUT onclick=setAll(this.checked) type=checkbox value=217555 name=checkbox> </TD><TD class=displaytablerow align=left></TD><TD>
EF042624 </TD><TD>A/teal/Egypt/14051-NAMRU3/2005 </TD><TD>HA (4) </TD><TD>
1596 </TD><TD>2005 </TD><TD>H5N1 </TD><TD></TD></TR><TR bgColor=white><TD align=left><INPUT onclick=setAll(this.checked) type=checkbox value=217554 name=checkbox> </TD><TD class=displaytablerow align=left></TD><TD>
EF042623 </TD><TD>A/teal/Egypt/9885-NAMRU3/2005 </TD><TD>HA (4) </TD><TD>
1197 </TD><TD>2005 </TD><TD>H5 </TD></TR></TBODY></TABLE>