Different trH3N2 strains with M segment from H1N1pdm09 found in swine and deposited at GISAID?

[alert]

Other forums are reporting that sequences of trH3N2 have been deposited at GISAID with the M gene from 2009 H1N1, but different H3 and N2 than the ten human cases so far:

A/swine/Texas/A01049555/2011, A/swine/Texas/A01049556/2011, A/swine/Indiana/A01049750/2011, A/swine/Texas/A01049914/2011, A/swine/Texas/A01049915/2011

Might this indicate extensive reassortment in swine?

 

[sharon sanders]

Re: Different trH3N2 strains with M segment from H1N1pdm09 found in swine and deposited at GISAID?

These are the profiles that I find in the database:


A/swine/Texas/A01049555/2011
EPI_ISL_97087
A / H3N2
Collection date: 2011-02-14
Location: United States
Host: Swine
No notations.


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A/swine/Texas/A01049556/2011
EPI_ISL_97086
A / H3N2
Collection date: 2011-02-14
Location: United States
Host: Swine
No notations.


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A/swine/Indiana/A01049750/2011

I do not see an isolate with this name.


-----------------------------------------


A/swine/Texas/A01049914/2011
EPI_ISL_97128
A / H3N2
Collection date: 2011-04-28
Location: United States
Host: Swine
No notations.


-----------------------------------------


A/swine/Texas/A01049915/2011
EPI_ISL_97127
A / H3N2
Collection date: 2011-04-28
Location: United States
Host: Swine
No notations.

 

[alert]

Re: Different trH3N2 strains with M segment from H1N1pdm09 found in swine and deposited at GISAID?

The post:

http://www.flutrackers.com/forum/showthread.php?t=177214

claims the CDC has found at least 8 trH3N2 viruses with the M from 2009 H1N1 in swine. I guess the four or five above are included in that count.