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Discussion thread: H5N1 avian flu in US dairy cows including human cases (poultry, dairy workers) - March 24, 2024 +

...
The Oregon Department of Agriculture announced on Friday, Oct. 25, that poultry on this farm represented the first H5N1 detection in Crook County, Oregon. On Tuesday, Oct. 29, the USDA National Veterinary Services Laboratories also confirmed one of the farm’s five pigs to be infected with H5N1, marking the first detection of H5N1 in swine in the United States.

The livestock and poultry on this farm shared water sources, housing, and equipment; in other states, this combination has enabled transmission between species. Although the swine did not display signs of illness, the Oregon Department of Health and USDA tested the five swine for H5N1 out of an abundance of caution and because of the presence of H5N1 in other animals on the premises. The swine were euthanized to facilitate additional diagnostic analysis. Test results were negative for two of the pigs, and test results are still pending for two others.    
...
https://flutrackers.com/forum/forum...n1-detections-in-swine-aphis-october-30-2024​
 
...
The Oregon Department of Agriculture announced on Friday, Oct. 25, that poultry on this farm represented the first H5N1 detection in Crook County, Oregon. On Tuesday, Oct. 29, the USDA National Veterinary Services Laboratories also confirmed one of the farm’s five pigs to be infected with H5N1, marking the first detection of H5N1 in swine in the United States.

The livestock and poultry on this farm shared water sources, housing, and equipment; in other states, this combination has enabled transmission between species. Although the swine did not display signs of illness, the Oregon Department of Health and USDA tested the five swine for H5N1 out of an abundance of caution and because of the presence of H5N1 in other animals on the premises. The swine were euthanized to facilitate additional diagnostic analysis. Test results were negative for two of the pigs, and test results are still pending for two others.    
...
https://flutrackers.com/forum/forum...n1-detections-in-swine-aphis-october-30-2024​

This is a big deal.
 
I am somewhat perplexed by what is going on with the wastewater data. There have been significant spikes in some places with dairy processing facilities such as Oswego NY (147) where the Influenza A signal has not been subtyped, but yet the H5 signal is shown as zero. I was assuming this was due to some sort of lag in the reporting.

Then I saw the most recent report for Turlock, CA. This is showing a reading of 1948 for Influenza A with only 1040 subtyped as H5. I have no specific knowledge of their testing and reporting protocols, and am wondering if there has been some sort of shift in the H5 that is causing their primers to fail to detect all of the H5 signal.

Edit: I am assuming that such an increase is due to dairy processing of H5 infected cows as the magnitude of the spike exceeds any other reasonable explanation.

I was just reading this article: https://pmc.ncbi.nlm.nih.gov/articles/PMC10302261/ and it seems that the D1-4 genotypes are based on changes in the HA - it would make sense then that the primer that is detecting H5 other genotypes might not also detect the D genotypes based on the methods described in this article: https://pubs.acs.org/doi/10.1021/acs.estlett.4c00331

I don't know specifically if the sequences that they use for the H5 probe have changed and I don't believe they have published the D1 genotypes sequences yet.
 
10/30/24

Properly Cooked Pork Remains Safe Amidst Oregon H5N1 Swine Detection


DES MOINES, IOWA, October 30, 2024 – The National Pork Producers Council (NPPC) confirms there is no food safety concerns about the nation’s pork supply after the detection of H5N1 influenza in swine on a small backyard farm in Oregon. NPPC continues to work closely with the United States Department of Agriculture (USDA) Animal and Plant Health Inspection Service (APHIS) Veterinary Services and pork industry stakeholders on disease surveillance programs.

“The confirmed case in Oregon poses no threat to consumer health or food safety; properly handled and cooked pork products remain safe for consumption,” said Bryan Humphreys, NPPC CEO. “The entire pork industry remains committed to safeguarding food safety and human and animal health.”

With rigorous on-farm biosecurity programs in place, the pork industry has worked alongside APHIS since 2009 to carry out the swine influenza surveillance program to identify influenza viruses circulating in swine, proactively detect reassortment viruses that could impact public health, and gain knowledge to contribute to improved animal health diagnostics and vaccines.

“Pork producers have always been proactive and diligent about implementing biosecurity plans as part of their daily production practices to assure animals wellbeing and food safety,” said Lori Stevermer, NPPC president and Minnesota pork producer. “This detection serves as a reminder for producers of all sizes to understand and address influenza virus risks.”

NPPC appreciates the ongoing collaboration among producers, industry stakeholders, and state and federal animal health officials. These partnerships are essential for rapidly detecting and eradicating viruses, including H5N1.

Additional Resources:
https://nppc.org/news/properly-cooked-pork-remains-safe-amidst-oregon-h5n1-swine-detection/
 


For Immediate Release:

November 01, 2024

H5 Avian Flu Detected at Wastewater Sampling Site in Los Angeles County, Public Health Closely Monitoring Situation - Risk Remains Low

The Los Angeles County Department is investigating possible sources of H5 avian flu, which has been detected at low levels for the first time at one of the wastewater sampling sites in Los Angeles County.

H5N1 is one type of avian influenza that has been spreading among birds and mammals, leading to a nationwide outbreak. There are no reports of human H5N1 cases in Los Angeles County and the overall risk of H5N1 to LA County residents remains low. There is no evidence of sustained human to human transmission with this strain of H5N1.

Public Health is actively engaging key risk groups such as dairy and meat processing sites to identify possible sources of H5 avian flu in wastewater. The virus may have been introduced into wastewater by discarded contaminated animal products, infected wild bird droppings entering the sewage system, or animal infection. Public Health routinely monitors and tests symptomatic birds, pets, and wild mammals in LA County for H5N1 through our Public Health Laboratory.

Wastewater sampling is routinely performed as part of ongoing surveillance for infectious diseases including H5N1. H5 has previously been detected in wastewater in both northern and southern California. The virus has been detected in more than 200 dairies in California and there have been 16 human cases of avian flu in California. Public Health, in conjunction with the California Department of Public Health (CDPH), the Centers for Disease Control and Prevention (CDC) and state and federal agriculture agencies, has been tracking the situation closely.

While the current risk of transmission to LA County residents is low, Public Health encourages residents to follow these best practices when around animals or when consuming animal products:
  • Do not eat raw milk, raw cheese, and undercooked meat products.
  • Avoid unprotected contact with sick or dead animals, or materials contaminated with bird feces. The virus can spread to other birds, pets or mammals by contact with infected feces or consumption of infected animals.
  • Avoid handling wild birds and observe them only from a distance. If you have to handle wild birds, even if they appear healthy, practice good hand hygiene and consider wearing a well-fitting mask. Some birds may carry the virus but appear to be healthy.
  • Report sick or dead birds to local animal control agency for potential collection and testing. Sick birds or animals may not have flu-like symptoms, but instead may be unable to fly, have seizures, have difficulty walking or be found dead.
  • Prevent wild birds from getting into areas housing pet birds or poultry. Also make sure wild birds cannot defecate down into areas holding pet birds or poultry.
  • Take down bird feeders and communal bird baths to reduce the risk of the virus spreading from bird-to-bird.
  • Residents should also keep pets away from sick and dead birds. There is some risk of the virus being transmitted to mammals such as dogs, cats, and wild mammals, especially if they eat infected, uncooked birds.
  • It is especially important that people who may have exposure to infected or potentially infected birds or other animals get a seasonal flu vaccine. Seasonal flu vaccination will not prevent infection with avian influenza viruses but can reduce the risk of getting sick with human and bird flu viruses at the same time.
About H5N1

Avian flu refers to various strains of influenza A viruses that typically infect birds. While these viruses mainly affect wild birds, sometimes they also infect other animals, including wild and domestic animals (including seals, foxes, cats, and cows). H5N1 is one type of avian influenza that has been spreading among birds and mammals, leading to a nationwide outbreak. This is the first time these bird flu viruses have been found to be spreading in cows.

Signs/symptoms of H5N1 virus infection in humans may include:
  • Cough, sore throat, runny or stuffy nose, muscle or body aches, headaches, fatigue
  • Fever* or feeling febrile
  • Eye redness (or conjunctivitis)
  • Shortness of breath or difficulty breathing
  • Diarrhea, nausea, vomiting
*It is important to note that infection with influenza viruses, including novel influenza A viruses, does not always cause fever. Fever may not occur in infected persons of any age, particularly in persons aged 65 years and older or people with immunosuppression.

For questions or to find a nearby clinic or doctor, residents can call the Public Health InfoLine at 833-540-0473. Open every day from 8 a.m. to 8 p.m.

For more information, visit our websites:

Avian flu in animals: publichealth.lacounty.gov/vet/HPAI.htm

Avian flu in humans: ph.lacounty.gov/acd/diseases/h5n1.htm


http://publichealth.lacounty.gov/phcommon/public/media/mediapubhpdetail.cfm?prid=4872
 
The Los Angeles County Department is investigating possible sources of H5 avian flu, which has been detected at low levels for the first time at one of the wastewater sampling sites in Los Angeles County.



The October 28 reading was low levels of 1.945, they just posted the October 30 reading of 20.74. This facility processes the wastewater from over 4.8 million residents, businesses and industries. This contrasts with the Turlock wastewater facility's 91,000 so any affluent from a meat any dairy processing facility would be diluted 50 times more at this Warren facility. So assuming this is a similar point source event from a dairy facility, the contamination is at about the same magnitude as the Turlock facility.
 
The Turlock wastewater facility's latest reading was 1177 InfA_H5:PMMoV Normalized on October 30, 2024.

WastewaterSCAN Dashboard
H5, Turlock, CA


image.png


https://data.wastewaterscan.org/tra...mQV9INXhAigEGYTg3M2I0&selectedChartId=a873b4​
 
The last of Colorado’s dairy cows infected with bird flu have been released from quarantine


By Molly Cruse, Colorado Public Radio
Saturday, Nov 2, 2024 11:45 AM

Earlier this summer, Colorado broke records for the highest number of reported cases in U.S. dairy herds to be infected with avian flu. It was also the first time Colorado’s dairy industry was impacted by the disease. Now, all the infected herds have been released from quarantine.

Dr. Maggie Baldwin, Colorado’s State Veterinarian, said while she is very pleased that the last dairy herd has been released from quarantine, she doesn’t think the state’s dairy industry is out of the woods yet.

“For us to have achieved the milestone of releasing all of our dairy herds from quarantine in a six-month timeframe is pretty remarkable. I'm really proud of the way our state has handled this,” Baldwin said. “But it's too early to know what the long-term impacts are with HPAI in dairy herds, it's too early to know if we're really in the clear right now.”…,.
​In the last six months, more than 75% of Colorado’s dairy herds were infected with the disease.​…

According to Baldwin, the state will continue to implement mandatory weekly bulk tank testing and will continue to do so “until we have confidence that we don't have the disease.”​…
:tiphat:
https://www.durangoherald.com/artic...-bird-flu-have-been-released-from-quarantine/
 
VILSACK: AVIAN FLU IN HOGS DIFFERENT THAN CATTLE

November 1, 2024 By Carah Hart Filed Under: Livestock, News, USDA
...
“It’s not even the same necessarily compared to what we see in the poultry circumstances,” says Vilsack. “We tested poultry and clearly, they had the virus. That led us to test the swine. This was a very small, family farm operation with 70 birds, a couple of pigs and a couple of mini pigs.”
...
“It’s important to know this happened, but there’s nothing for them to do. Pork producers deal with a variety of viruses on an ongoing basis. They’re very familiar.”
...
Hear the press conference with Vilsack.

Audio:
https://www.brownfieldagnews.com/news/vilsack-avian-flu-in-hogs-different-than-cattle/
 
Has H5N1 been tracked all along in wastewater? Wondering if this is something we've never seen before. If it's an animal source, what has changed? Does San Diego have infected herds?

If this is spreading in the community with no severe cases showing up in ERs, what does that mean?
 
Despite warnings from bird flu experts, it’s business as usual in California dairy country

By Susanne Rust and Melissa Gomez
Nov. 26, 2024 3 AM PT
...
“We are in a soup of virus. I mean, there’s virus everywhere around us at this point,” said Dr. Marcela Uhart, a wildlife veterinarian with UC Davis’ One Health institute, who is based in Argentina, speaking at symposium held by the O’Neill Institute at Georgetown Law recently. (11/15) “This virus is circulating left and right in mammals and in birds, as far as we can tell, some of them are not showing any signs of disease.”

In October, The Times visited Tipton, a dairy town in Tulare County, and spoke with several residents, including Elodia Ibañez, who said the number of reported human cases in California — which in mid-October was 16, and is now 23 — sounded too low. She said her husband, a dairy worker, told her that two of his co-workers had red, swollen eyes, but they had continued working despite displaying bird flu symptoms.
...
“My dad and uncle have told me there’s a bunch of dairies that have had outbreaks,” Anthony said. He said his dad and uncle take steps to stay safe, but many workers likely are not reporting getting sick because they don’t want to get in trouble.

“Some of them are here not legally. They’re relying on that job, they don’t want to jeopardize that,” he said.
...
It’s this blindness to — and ignorance of — the virus’ reach that has infectious disease and health experts concerned.
...
https://www.latimes.com/environment...rnings-are-going-unheeded-at-many-dairy-farms

 
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