Microbiol Resour Announc . Genome Sequencing of a Severe Acute Respiratory Syndrome Coronavirus 2 Isolate Obtained From a South African Patient With Coronavirus Disease 2019

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Microbiol Resour Announc


. 2020 Jul 2;9(27):e00572-20.
doi: 10.1128/MRA.00572-20.
Genome Sequencing of a Severe Acute Respiratory Syndrome Coronavirus 2 Isolate Obtained From a South African Patient With Coronavirus Disease 2019

Mushal Allam ¹ , Arshad Ismail ² , Zamantungwa T H Khumalo ² , Stanford Kwenda ² , Peter van Heusden ³ , Ruben Cloete ³ , Constantinos Kurt Wibmer ² , Phillip Senzo Mtshali ² , Florah Mnyameni ² , Thabo Mohale ² , Kathleen Subramoney ² , Sibongile Walaza ^{2 4} , Wendy Ngubane ² , Nevashan Govender ² , Nkengafac V Motaze ^{2 5} , Jinal N Bhiman, SA-COVID-19 response team


AffiliationsExpand

• PMID: 32616644
• DOI: 10.1128/MRA.00572-20

Abstract

As a contribution to the global efforts to track and trace the ongoing coronavirus pandemic, here we present the sequence, phylogenetic analysis, and modeling of nonsynonymous mutations for a severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) genome that was detected in a South African patient with coronavirus disease 2019 (COVID-19).