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Pathogen Clearance and New Respiratory Tract Infections Among Febrile Children in Zanzibar Investigated With Multitargeting Real-Time Polymerase Chain

tetano

Editor, Senior Moderator
Pediatr Infect Dis J. 2018 Jul;37(7):643-648. doi: 10.1097/INF.0000000000001876.
[h=1]Pathogen Clearance and New Respiratory Tract Infections Among Febrile Children in Zanzibar Investigated With Multitargeting Real-Time Polymerase Chain Reaction on Paired Nasopharyngeal Swab Samples.[/h] Elfving K[SUP]1,[/SUP][SUP]2[/SUP], Shakely D[SUP]3,[/SUP][SUP]4,[/SUP][SUP]5[/SUP], Andersson M[SUP]1[/SUP], Baltzell K[SUP]6,[/SUP][SUP]7[/SUP], Msellem MI[SUP]8[/SUP], Bj?rkman A[SUP]3[/SUP], M?rtensson A[SUP]9[/SUP], Petzold M[SUP]4[/SUP], Trollfors B[SUP]2[/SUP], Lindh M[SUP]1[/SUP].
[h=3]Author information[/h]

[h=3]Abstract[/h] [h=4]BACKGROUND:[/h] New molecular methods have revealed frequent and often polymicrobial respiratory infections in children in low-income settings. It is not known whether presence of multiple pathogens is due to prolonged infections or to frequent exposure. The aim of this study was to analyze short-term pathogen clearance from nasopharynx and the rate of new respiratory tract infections in febrile preschool children.
[h=4]METHODS:[/h] Children (n = 207) with uncomplicated acute febrile illness 2-59 months of age presenting to a health center in Zanzibar, Tanzania, April-July 2011, were included. Paired nasopharyngeal swab samples, collected at enrolment and after 14 days, were analyzed by multiple real-time polymerase chain reaction for Adenovirus, bocavirus, Bordetella pertussis, Chlamydophila pneumoniae, Coronaviruses, Enterovirus, influenza A and B virus, metapneumovirus, measles virus, Mycoplasma pneumoniae, parainfluenza virus, Parechovirus, respiratory syncytial virus and Rhinovirus. An age-matched and geographically matched healthy control group (n = 166) underwent nasopharyngeal sampling on 1 occasion.
[h=4]RESULTS:[/h] At baseline, 157/207 (76%) patients had at least 1 pathogen detected, in total 199 infections. At follow-up (day 14), 162/199 (81%) of these infections were not detected, including >95% of the previously detected infections with Enterovirus, influenza A virus, influenza B virus, metapneumovirus or parainfluenza virus. Still 115 (56%) children were positive for at least 1 pathogen at follow-up, of which 95/115 (83%) were not found at baseline. Detection of influenza B on day 14 was significantly associated with fever during follow-up.
[h=4]CONCLUSION:[/h] The results suggest that children with acute febrile illness in Zanzibar rapidly clear respiratory tract infections but frequently acquire new infections within 14 days.


PMID: 29889810 DOI: 10.1097/INF.0000000000001876
 
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