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Birds of a Feather: Commercial Producers Play Chicken with Avian Flu

Shiloh

Editor, Senior Moderator
Source: http://www.sciam.com/article.cfm?id=playing-chicken-with-bird-flu

November 4, 2008 in Biology
Birds of a Feather: Commercial Producers Play Chicken with Avian Flu
Narrowing the gene pool to enhance meat and egg production in chickens could provoke some unintended consequences

In the late 1980s thousands of chickens died from a cancer caused by a virus known as avian leukosis virus J because they were all descended from a few roosters susceptible to the disease.

This is just one example of how a lack of genetic diversity can imperil livestock and agriculture. Similar instances abound from the Irish potato famine of the 19th century to cattle raised for meat?one bull named Ivanhoe passed on his genetic susceptibility to an immune system disorder to roughly 15 percent of all the Holstein bulls in the U.S. today. Now a new study, published in Proceedings of the National Academy of Sciences USA, shows that the world's 40 billion commercial chickens?those raised for their meat and eggs?have half the genetic diversity possible in the chicken genome, rendering them susceptible to other crippling disease outbreaks.

Avian disease specialist Hans Cheng of the U.S. Department of Agriculture and his colleagues compared the variety of genes in more than 2,500 chickens, 1,440 of whom were from commercial farms in the U.S. Some of these industrial chickens had lost as much as 90 percent of the genes carried by their peers, such as the red jungle fowl of Asia, which gave rise to all chickens, as well as noncommercial breeds of chickens like the Chinese silkie. On average, commercial chickens lacked at least 50 percent of the genes present in the chicken genome.

"This lack of diversity in commercial stocks is most likely due to the use of a limited number of chicken breeds to form the commercial stocks," Cheng says. This "commercial stock may lack the genetic diversity necessary to combat new and emerging diseases."

All white egg-laying chickens in the U.S. are derived from the white Leghorn breed, whereas all chickens grown for meat, known as broilers, derive from the British Cornish, or Indian, game breed. Winnowing the genetic code has allowed farmers to meet the current global demand of 61 metric tons of meat and more than 55 million metric tons of eggs?an increase in production of 436 percent since 1970. But it has also allowed for the potential of a so-called "disease shock".

"Disease shocks have certainly been seen in the plant world and have had major impact, both human and economic: the famous Irish potato famine of the 19th century and more recently Dutch elm disease [a fungal infection]," says agricultural economist Carlos Ser?, director general of the International Livestock Research Institute (ILRI). "Disease shocks in chicken populations could potentially occur, for example, with very transmissible and pathogenic avian flu viruses ."

Without rare genes that, in essence, inoculate chickens against such bird flu , a virulent outbreak could shut down chicken farming. But it is hard to know which genes are missing, Cheng notes, because researchers have identified so few of the genes and their corresponding traits in the chicken genome.

"The poultry industry is clearly doing well for the selection of important agronomic traits," such as large breast muscles (more meat) and enhanced egg-laying, he says. "Until there is a necessity to add genetic diversity, they will continue to select within their existing populations."

He warns, however, that it may be too late by the time that necessity becomes apparent. To avert any mass deaths, he recommends that farmers breed commercial chickens with other types of chickens to preserve a reservoir of potentially usefule genes . Of course, that may involve trade-offs in traits such as egg-laying that are now the goal.

Some researchers, including those at ILRI, have called for creating a "gene bank" for livestock similar to seed banks used for important crops that would contain a frozen record of livestock genetic diversity. "It would be interesting to do this for other livestock in which large-scale commercial breeding is important, such as dairy and pigs," Ser? notes, to see how these domesticated animals have fared.

Such gene banks would require new technologies, however, since no one has successfully stored either rooster semen or the yolky egg over the long term. In the meantime, Cheng says research should continue to try to pinpoint genes that confer resistance to bird flu in other breeds of fowl to spare both humans and chickens. "If we could identify genetic resistance," Cheng says, "then this would greatly impact both the poultry industry and human health."
 
Re: Birds of a Feather: Commercial Producers Play Chicken with Avian Flu

Source: http://www.publicaffairs.ubc.ca/ubcreports/2008/08nov06/chickens.html

UBC Reports | Vol. 54 | No. 11 | Nov. 6, 2008
No Ordinary Chickens

By Brian Lin

They may look and walk like chickens, but the two-legged fowls at the Avian Genetic Resource Centre (AGRC) are no ordinary birds.

The AGRC is a partnership between UBC?s Faculty of Land and Food Systems and Agriculture and Agri-Foods Canada, based in the Pacific Agricultural Research Centre in Agassiz, B.C.

The nine lines of chickens and nine lines of Japanese quail at the AGRC represent a collection of unique genetic variations and may hold the key to a safer poultry supply and higher economic potentials. Each of the more than 3,500 chickens and quail at the facility is carefully bred and pedigreed. Collectively, they build a living genetic library consisting of a wide variety of genetic mutations. In addition, genetic materials from most of the major chicken breeds in Canada are kept in the deep freeze for preservation. The treasure trove of avian genetics makes B.C. a key resource in the global industry.

?There are currently only two international chicken breeding companies supplying commercial breeding stocks to the whole world,? says UBC Avian Genetics Prof. Kim Cheng. ?While flock uniformity is convenient for production and processing, the lack of genetic variation also leaves the door wide open for large-scale disease outbreaks.

?A flock could become susceptible to a new strain of virus such as Avian Flu and be completely wiped out,? says Cheng.
Poultry stocks today are exposed to more diseases than ever and chronic use of antibiotics has also slowed down the process of new genetic variations that could resist new pathogens.

?The genetic resources at AGRC allow scientists from all over the world to study how genome affects size and meat quality, disease resistance, how well particular breeds could adapt to farm facilities and how we can help industry improve housing environments and breeding practices,? says Cheng, who is also an expert on exotic birds.

Poultry and its allied feed and processing sectors are a major industry in Canada. The value of poultry products totalled $2.6 billion in 2004 and there?s a new industry blooming abroad promising significant economic opportunities.

?Specialty birds such as Japanese quail, Partridge tinamou and Emu are gaining popularity in Asia and Europe for their oil, meat and eggs,? says Cheng. ?The expertise being cultivated at AGRC puts B.C. in an ideal position to become a leading exporter of these highly specialized products while diversifying existing operations.?

Genome research on birds may also lead to advances in human health, says Cheng, whose work almost three decades ago recently helped successfully reverse congenital blindness in a clinical trial.

In 1980, Cheng discovered a gene mutation in a line of Rhode Island Red (RIR) chickens that produced blindness at hatching. The blind chickens were passed onto the Dept. of Neuroscience at the University of Florida for further analysis and the gene was later sequenced.

?The research group at the U of F found that the gene in the blind chicken had the same sequence as a human gene that caused a form of congenital blindness called Leber?s Congenital Amaurosis,? says Cheng.

Using the blind chicken in their study, the U of F team further developed a gene therapy that restored vision to the blind chicken in 2006 and last April, a team of researchers from the University of Pennsylvania furthered the method to partially restore sight to three human patients.

Both the RIR and the blind chicken lines are housed at AGRC.
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