Originally posted by wotan
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RIKEN FAMSBASE - 164 new sequences deposited : 164 Mexico, 6 China, 12 Japan, & 12 Spain
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Re: RIKEN FAMSBASE - 164 new sequences deposited : 164 Mexico, 6 China, 12 Japan, & 12 Spain
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Re: RIKEN FAMSBASE - 164 new sequences deposited : 164 Mexico, 6 China, 12 Japan, & 12 Spain
Originally posted by AlaskaDenise View PostI believe I'm see a "Y" in the NA of GQ293078!
Influenza A virus (A/Zhejiang/2/2009(H1N1))
Would someone more knowledgeable please check my work?
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Re: RIKEN FAMSBASE - 164 new sequences deposited : 164 Mexico, 6 China, 12 Japan, & 12 Spain
Originally posted by AlaskaDenise View PostDr. Niman just explained that we need to see a YYY in the area, not a YHY.
So our tami meds still work (for now).
Pheeew.
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Re: RIKEN FAMSBASE - 164 new sequences deposited : 164 Mexico, 6 China, 12 Japan, & 12 Spain
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Re: RIKEN FAMSBASE - 164 new sequences deposited : 164 Mexico, 6 China, 12 Japan, & 12 Spain
Originally posted by niman View PostAll sequences at NBCI that can be viewed by the public, are public - no permission required.
A few days ago, it seemed to be a timing issue, i.e., that Riken had a more current update.
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Re: RIKEN FAMSBASE - 164 new sequences deposited : 164 Mexico, 6 China, 12 Japan, & 12 Spain
Originally posted by AlaskaDenise View PostI have problems on the main NCBI page also. It doesn't appear to know about the same data that the Riken database is clearly extracting from NCBI. I'm assuming they have different permissions.
I haven't learned how to use the other databases yet, so can't answer your questions on that.
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Re: RIKEN FAMSBASE - 164 new sequences deposited : 164 Mexico, 6 China, 12 Japan, & 12 Spain
Dr. Niman just explained that we need to see a YYY in the area, not a YHY.
So our tami meds still work (for now).
Pheeew.
.
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Re: RIKEN FAMSBASE - 164 new sequences deposited : 164 Mexico, 6 China, 12 Japan, & 12 Spain
it's 275, not 274.
274 is counting by another system, presumably N2
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Re: RIKEN FAMSBASE - 164 new sequences deposited : 164 Mexico, 6 China, 12 Japan, & 12 Spain
Originally posted by gsgs View Postgenbank has them on the swine-flu page,
although some of the records don't load.
It's not yet available at the search page.........
I haven't learned how to use the other databases yet, so can't answer your questions on that.
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Re: RIKEN FAMSBASE - 164 new sequences deposited : 164 Mexico, 6 China, 12 Japan, & 12 Spain
Thanks to both of you for examining the sequences and sharing with us what you found. The more eyes, the better.
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Re: RIKEN FAMSBASE - 164 new sequences deposited : 164 Mexico, 6 China, 12 Japan, & 12 Spain
I left out the position I was referencing (obviously), I meant 274.
Their "[NA of A/Zhejiang/2/2009(H1N1) : GQ293078] Mutation information"
scroll down window on the lower right clearly reads " 274Y".
If the mutation line format is confusing, it helps to read the "help" link on the 1st page - upper right top line.
I await Mamabird's reading.
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Re: RIKEN FAMSBASE - 164 new sequences deposited : 164 Mexico, 6 China, 12 Japan, & 12 Spain
Originally posted by AlaskaDenise View PostI believe I'm see a "Y" in the NA of GQ293078!
Influenza A virus (A/Zhejiang/2/2009(H1N1))
Would someone more knowledgeable please check my work?
.
I see a H : ...APNYHY...
position 275
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Re: RIKEN FAMSBASE - 164 new sequences deposited : 164 Mexico, 6 China, 12 Japan, & 12 Spain
genbank has them on the swine-flu page,
although some of the records don't load.
It's not yet available at the search page.
Does riken allow to download them all into one file ?
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Re: RIKEN FAMSBASE - 164 new sequences deposited : 164 Mexico, 6 China, 12 Japan, & 12 Spain
I believe I'm see a "Y" in the NA of GQ293078!
Influenza A virus (A/Zhejiang/2/2009(H1N1))
Would someone more knowledgeable please check my work?
.
Leave a comment:
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Re: RIKEN FAMSBASE - 164 new sequences deposited : 164 Mexico, 6 China, 12 Japan, & 12 Spain
only 3 PB2s are shown and they are all an "E".
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