LOCUS GQ132184 284 bp cRNA linear VRL 09-MAY-2009
DEFINITION Influenza A virus (A/Nonthaburi/102/2009(H1N1)) segment 4
hemagglutinin (HA) gene, partial cds.
ACCESSION GQ132184
VERSION GQ132184.1 GI:229892685
DBLINK Project:37813
KEYWORDS .
SOURCE Influenza A virus (A/Nonthaburi/102/2009(H1N1))
ORGANISM Influenza A virus (A/Nonthaburi/102/2009(H1N1))
Viruses; ssRNA negative-strand viruses; Orthomyxoviridae;
Influenzavirus A.
REFERENCE 1 (bases 1 to 284)
AUTHORS de Silva,J.W., Lukebua,A., Waicharoen,S. and Chitakanpitch,M.
TITLE First 2009 H1N1 Influenza (Swine Flu) Isolate from Thailand
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 284)
AUTHORS de Silva,J.W., Lukebua,A., Waicharoen,S. and Chitakanpitch,M.
TITLE Direct Submission
JOURNAL Submitted (09-MAY-2009) National Influenza Center, Department of
Medical Sciences, 88/7 Ministry of Public Health Tiwanon Rd.,
Muang, Nonthaburi 11000, Thailand
COMMENT Swine influenza A (H1N1) virus isolated during human swine flu
outbreak of 2009.
FEATURES Location/Qualifiers
source 1..284
/organism="Influenza A virus
(A/Nonthaburi/102/2009(H1N1))"
/mol_type="viral cRNA"
/strain="A/Nonthaburi/102/2009"
/serotype="H1N1"
/host="Homo sapiens"
/db_xref="taxon:644373"
/segment="4"
/country="Thailand"
/collection_date="2009"
/note="passaged in MDCK cells"
gene <1..>284
/gene="HA"
CDS <1..>284
/gene="HA"
/codon_start=2
/product="hemagglutinin"
/protein_id="ACQ89893.1"
/db_xref="GI:229892686"
/translation="SSDTPVHDCNTTCQTPKGAINTSLPFQNIHPITIGKC PKYVKST
KLRLATGLRNVPSIQSRGLFGAIAGFIEGGWTGMVDGWYGYHHQNEQGSG "
ORIGIN
1 cagttcagat acaccagtcc acgattgcaa tacaacttgt cagacaccca agggtgctat
61 aaacaccagc ctcccatttc agaatataca tccgatcaca attggaaaat gtccaaaata
121 tgtaaaaagc acaaaattga gactggccac aggattgagg aatgtcccgt ctattcaatc
181 tagaggccta tttggggcca ttgccggttt cattgaaggg gggtggacag ggatggtaga
241 tggatggtac ggttatcacc atcaaaatga gcaggggtca ggat
DEFINITION Influenza A virus (A/Nonthaburi/102/2009(H1N1)) segment 4
hemagglutinin (HA) gene, partial cds.
ACCESSION GQ132184
VERSION GQ132184.1 GI:229892685
DBLINK Project:37813
KEYWORDS .
SOURCE Influenza A virus (A/Nonthaburi/102/2009(H1N1))
ORGANISM Influenza A virus (A/Nonthaburi/102/2009(H1N1))
Viruses; ssRNA negative-strand viruses; Orthomyxoviridae;
Influenzavirus A.
REFERENCE 1 (bases 1 to 284)
AUTHORS de Silva,J.W., Lukebua,A., Waicharoen,S. and Chitakanpitch,M.
TITLE First 2009 H1N1 Influenza (Swine Flu) Isolate from Thailand
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 284)
AUTHORS de Silva,J.W., Lukebua,A., Waicharoen,S. and Chitakanpitch,M.
TITLE Direct Submission
JOURNAL Submitted (09-MAY-2009) National Influenza Center, Department of
Medical Sciences, 88/7 Ministry of Public Health Tiwanon Rd.,
Muang, Nonthaburi 11000, Thailand
COMMENT Swine influenza A (H1N1) virus isolated during human swine flu
outbreak of 2009.
FEATURES Location/Qualifiers
source 1..284
/organism="Influenza A virus
(A/Nonthaburi/102/2009(H1N1))"
/mol_type="viral cRNA"
/strain="A/Nonthaburi/102/2009"
/serotype="H1N1"
/host="Homo sapiens"
/db_xref="taxon:644373"
/segment="4"
/country="Thailand"
/collection_date="2009"
/note="passaged in MDCK cells"
gene <1..>284
/gene="HA"
CDS <1..>284
/gene="HA"
/codon_start=2
/product="hemagglutinin"
/protein_id="ACQ89893.1"
/db_xref="GI:229892686"
/translation="SSDTPVHDCNTTCQTPKGAINTSLPFQNIHPITIGKC PKYVKST
KLRLATGLRNVPSIQSRGLFGAIAGFIEGGWTGMVDGWYGYHHQNEQGSG "
ORIGIN
1 cagttcagat acaccagtcc acgattgcaa tacaacttgt cagacaccca agggtgctat
61 aaacaccagc ctcccatttc agaatataca tccgatcaca attggaaaat gtccaaaata
121 tgtaaaaagc acaaaattga gactggccac aggattgagg aatgtcccgt ctattcaatc
181 tagaggccta tttggggcca ttgccggttt cattgaaggg gggtggacag ggatggtaga
241 tggatggtac ggttatcacc atcaaaatga gcaggggtca ggat
Comment