LOCUS FJ743469 1728 bp cRNA linear VRL 17-FEB-2009
DEFINITION Influenza A virus (A/Philippines/1159/2008(H1N1)) hemagglutinin
(HA) gene, complete cds.
ACCESSION FJ743469
VERSION FJ743469.1 GI:223551681
KEYWORDS .
SOURCE Influenza A virus (A/Philippines/1159/2008(H1N1))
ORGANISM Influenza A virus (A/Philippines/1159/2008(H1N1))
Viruses; ssRNA negative-strand viruses; Orthomyxoviridae;
Influenzavirus A.
REFERENCE 1 (bases 1 to 1728)
AUTHORS Komadina,N.
TITLE Direct Submission
JOURNAL Submitted (10-FEB-2009) WHO CC for Reference and Research on
Influenza, Parkville, 45 Poplar Rd., Parkville, Victoria 3052,
Australia
COMMENT 'Some of the information does not have GenBank feature identifiers
and is being provided in the comment section.'.
##EpifluData-START##
Isolate A/Philippines/1159/2008
Subtype H1N1
Segment_name HA
Host_gender M
Host_age 1
Passage_history MDCKX
Adamantane_resistance sensitive
Oseltamivir_resistance resistant
Country Philippines
Collection_day 30
Collection_month 6
Collection_year 2008
EPI_accession EPI173267
##EpifluData-END##
FEATURES Location/Qualifiers
source 1..1728
/organism="Influenza A virus
(A/Philippines/1159/2008(H1N1))"
/mol_type="viral cRNA"
/strain="A/Philippines/1159/2008"
/serotype="H1N1"
/host="Homo sapiens; gender M; age 1"
/db_xref="taxon:598580"
/segment="4"
/country="Philippines"
/collection_date="30-Jun-2008"
gene 1..1698
/gene="HA"
CDS 1..1698
/gene="HA"
/codon_start=1
/product="hemagglutinin"
/protein_id="ACM90868.1"
/db_xref="GI:223551682"
/translation="MKVKLLVLLCTFTATYADTICIGYHANNSTDTVDTVL EKNVTVT
HSVNLLENNHNGKLCLLKGIAPLQLGNCSVAGWILGNPECELLISKESWS YIVEKPNP
ENGTCYPGHFADYEELREQLSSVSSFERFEIFPKESSWPNHTVTGVSASC SHNGESSF
YRNLLWLTGKNGLYPNLSKSYANNKEKEVLVLWGVHHPPNIANQKTLYHT ENAYVSVV
SSHYSRKFTPEIAKRPKVRDQEGRINYYWTLLEPGDTIIFEANGNLIAPR YAFALSRG
FGSGIINSNAPMDKCDAKCQTPQGAINSSLPFQNVHPVTIGECPKYVRSA KLRMVTGL
RNIPSIQSRGLFGAIAGFIEGGWTGMVDGWYGYHHQNEQGSGYAADQKST QNAINGIT
NKVNSVIEKMNTQFTAVGKEFNKLERRMENLNKKVDDGFIDIWTYNAELL VLLENERT
LDFHDSNVKNLYEKVKSQLKNNAKEIGNGCFEFYHKCNDECMESVKNGTY DYPKYSEE
SKLNREKIDGVKLESMGVYQILAIYSTVASSLVLLVSLGAISFWMCSNGS LQCRICI"
ORIGIN
1 atgaaagtaa aactactggt cctgttatgc acatttacag ctacatatgc agacacaata
61 tgtataggct accatgctaa caactcgacc gacactgttg acacagtact tgaaaagaat
121 gtgacagtga cacactctgt caacctgctt gagaacaatc acaatggaaa actatgtcta
181 ttaaaaggaa tagccccact acaattgggt aactgcagtg ttgccgggtg gatcttagga
241 aacccagaat gcgaattact gatttccaag gagtcatggt cctacattgt agaaaaacca
301 aatcctgaga atggaacatg ttacccaggg catttcgctg actatgagga attgagggag
361 caattgagtt cagtatcttc atttgagagg ttcgaaatat tccccaaaga aagctcatgg
421 cccaaccaca ccgtaaccgg agtgtcagca tcatgctccc ataatgggga aagcagtttt
481 tacagaaatt tgctatggct gacggggaag aatggtttgt acccaaacct gagcaagtcc
541 tatgcaaaca acaaagaaaa agaagtcctt gtactatggg gtgttcatca cccgccaaac
601 atagctaacc aaaagaccct ctatcataca gaaaatgctt atgtttctgt agtgtcttca
661 cattatagca gaaaattcac cccagaaata gccaaaagac ccaaagtaag agatcaagaa
721 ggaagaatca actactactg gactctgctt gaacccgggg atacaataat atttgaggca
781 aatggaaatc taatagcgcc aagatatgct ttcgcactga gtagaggctt tggatcagga
841 atcatcaact caaatgcacc aatggataaa tgtgatgcga agtgccaaac acctcaggga
901 gctataaaca gcagtcttcc tttccagaac gtacacccag tcacaatagg agagtgtcca
961 aagtatgtca ggagtgcaaa attaaggatg gttacaggac taaggaacat cccatccatt
1021 caatccagag gtttgtttgg agccattgcc ggtttcattg aaggggggtg gactggaatg
1081 gtagatggtt ggtatggtta tcatcatcag aatgagcaag gatctggcta tgctgcagat
1141 caaaaaagca cacaaaatgc cattaatggg attacaaaca aggtgaattc tgtaattgag
1201 aaaatgaaca ctcaattcac agcagtgggc aaagaattca acaaattgga aagaaggatg
1261 gaaaacttga ataaaaaagt tgatgatggg tttatagaca tttggacata taatgcagaa
1321 ctgttggttc tactggaaaa tgaaaggact ttggatttcc atgactccaa tgtgaagaat
1381 ctgtatgaga aagtaaaaag ccagttaaag aataatgcta aagaaatagg aaatgggtgt
1441 tttgaattct atcacaagtg taacgatgaa tgcatggaga gtgtaaagaa tggaacttat
1501 gactatccaa aatattccga agaatcaaag ttaaacaggg agaaaattga tggagtgaaa
1561 ttggaatcaa tgggagtcta tcagattctg gcgatctact caacagtcgc cagttctctg
1621 gttcttttgg tctccctggg ggcaatcagc ttctggatgt gttccaatgg gtctttgcag
1681 tgtagaatat gcatctaaga ccagaatttc agaaatataa ggaaaaac
DEFINITION Influenza A virus (A/Philippines/1159/2008(H1N1)) hemagglutinin
(HA) gene, complete cds.
ACCESSION FJ743469
VERSION FJ743469.1 GI:223551681
KEYWORDS .
SOURCE Influenza A virus (A/Philippines/1159/2008(H1N1))
ORGANISM Influenza A virus (A/Philippines/1159/2008(H1N1))
Viruses; ssRNA negative-strand viruses; Orthomyxoviridae;
Influenzavirus A.
REFERENCE 1 (bases 1 to 1728)
AUTHORS Komadina,N.
TITLE Direct Submission
JOURNAL Submitted (10-FEB-2009) WHO CC for Reference and Research on
Influenza, Parkville, 45 Poplar Rd., Parkville, Victoria 3052,
Australia
COMMENT 'Some of the information does not have GenBank feature identifiers
and is being provided in the comment section.'.
##EpifluData-START##
Isolate A/Philippines/1159/2008
Subtype H1N1
Segment_name HA
Host_gender M
Host_age 1
Passage_history MDCKX
Adamantane_resistance sensitive
Oseltamivir_resistance resistant
Country Philippines
Collection_day 30
Collection_month 6
Collection_year 2008
EPI_accession EPI173267
##EpifluData-END##
FEATURES Location/Qualifiers
source 1..1728
/organism="Influenza A virus
(A/Philippines/1159/2008(H1N1))"
/mol_type="viral cRNA"
/strain="A/Philippines/1159/2008"
/serotype="H1N1"
/host="Homo sapiens; gender M; age 1"
/db_xref="taxon:598580"
/segment="4"
/country="Philippines"
/collection_date="30-Jun-2008"
gene 1..1698
/gene="HA"
CDS 1..1698
/gene="HA"
/codon_start=1
/product="hemagglutinin"
/protein_id="ACM90868.1"
/db_xref="GI:223551682"
/translation="MKVKLLVLLCTFTATYADTICIGYHANNSTDTVDTVL EKNVTVT
HSVNLLENNHNGKLCLLKGIAPLQLGNCSVAGWILGNPECELLISKESWS YIVEKPNP
ENGTCYPGHFADYEELREQLSSVSSFERFEIFPKESSWPNHTVTGVSASC SHNGESSF
YRNLLWLTGKNGLYPNLSKSYANNKEKEVLVLWGVHHPPNIANQKTLYHT ENAYVSVV
SSHYSRKFTPEIAKRPKVRDQEGRINYYWTLLEPGDTIIFEANGNLIAPR YAFALSRG
FGSGIINSNAPMDKCDAKCQTPQGAINSSLPFQNVHPVTIGECPKYVRSA KLRMVTGL
RNIPSIQSRGLFGAIAGFIEGGWTGMVDGWYGYHHQNEQGSGYAADQKST QNAINGIT
NKVNSVIEKMNTQFTAVGKEFNKLERRMENLNKKVDDGFIDIWTYNAELL VLLENERT
LDFHDSNVKNLYEKVKSQLKNNAKEIGNGCFEFYHKCNDECMESVKNGTY DYPKYSEE
SKLNREKIDGVKLESMGVYQILAIYSTVASSLVLLVSLGAISFWMCSNGS LQCRICI"
ORIGIN
1 atgaaagtaa aactactggt cctgttatgc acatttacag ctacatatgc agacacaata
61 tgtataggct accatgctaa caactcgacc gacactgttg acacagtact tgaaaagaat
121 gtgacagtga cacactctgt caacctgctt gagaacaatc acaatggaaa actatgtcta
181 ttaaaaggaa tagccccact acaattgggt aactgcagtg ttgccgggtg gatcttagga
241 aacccagaat gcgaattact gatttccaag gagtcatggt cctacattgt agaaaaacca
301 aatcctgaga atggaacatg ttacccaggg catttcgctg actatgagga attgagggag
361 caattgagtt cagtatcttc atttgagagg ttcgaaatat tccccaaaga aagctcatgg
421 cccaaccaca ccgtaaccgg agtgtcagca tcatgctccc ataatgggga aagcagtttt
481 tacagaaatt tgctatggct gacggggaag aatggtttgt acccaaacct gagcaagtcc
541 tatgcaaaca acaaagaaaa agaagtcctt gtactatggg gtgttcatca cccgccaaac
601 atagctaacc aaaagaccct ctatcataca gaaaatgctt atgtttctgt agtgtcttca
661 cattatagca gaaaattcac cccagaaata gccaaaagac ccaaagtaag agatcaagaa
721 ggaagaatca actactactg gactctgctt gaacccgggg atacaataat atttgaggca
781 aatggaaatc taatagcgcc aagatatgct ttcgcactga gtagaggctt tggatcagga
841 atcatcaact caaatgcacc aatggataaa tgtgatgcga agtgccaaac acctcaggga
901 gctataaaca gcagtcttcc tttccagaac gtacacccag tcacaatagg agagtgtcca
961 aagtatgtca ggagtgcaaa attaaggatg gttacaggac taaggaacat cccatccatt
1021 caatccagag gtttgtttgg agccattgcc ggtttcattg aaggggggtg gactggaatg
1081 gtagatggtt ggtatggtta tcatcatcag aatgagcaag gatctggcta tgctgcagat
1141 caaaaaagca cacaaaatgc cattaatggg attacaaaca aggtgaattc tgtaattgag
1201 aaaatgaaca ctcaattcac agcagtgggc aaagaattca acaaattgga aagaaggatg
1261 gaaaacttga ataaaaaagt tgatgatggg tttatagaca tttggacata taatgcagaa
1321 ctgttggttc tactggaaaa tgaaaggact ttggatttcc atgactccaa tgtgaagaat
1381 ctgtatgaga aagtaaaaag ccagttaaag aataatgcta aagaaatagg aaatgggtgt
1441 tttgaattct atcacaagtg taacgatgaa tgcatggaga gtgtaaagaa tggaacttat
1501 gactatccaa aatattccga agaatcaaag ttaaacaggg agaaaattga tggagtgaaa
1561 ttggaatcaa tgggagtcta tcagattctg gcgatctact caacagtcgc cagttctctg
1621 gttcttttgg tctccctggg ggcaatcagc ttctggatgt gttccaatgg gtctttgcag
1681 tgtagaatat gcatctaaga ccagaatttc agaaatataa ggaaaaac
Comment