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mutation table :
http://magictour.free.fr/seq/swio8.l3
differences in the 8 segments in promille
http://magictour.free.fr/seq/swio8.l6c
(most) segments that are entirely different were obmitted
-----------------------------------
most of the human sequences show reassortments,
signaling that the strain still evolves in swine, not humans
and that there are multiple strains circulating in swine with frequent reassortments
but apparantly only some of them can go to humans,
(since the human sequences do cluster and many variations seen in swine
do not appear in humans)
today uploaded to genbank:
A/MN/19/2011/11/04(H3N2) which does not have the segment 7 from ******
A/WV/06/2011/11/21(H1N2) which is similar to the Iowa viruses from Nov.,
but with different segments 6(KA/13) , 1(MN/19,ME),8(Sw/NY,ME)
http://magictour.free.fr/seq/swio8.l3
differences in the 8 segments in promille
http://magictour.free.fr/seq/swio8.l6c
(most) segments that are entirely different were obmitted
-----------------------------------
most of the human sequences show reassortments,
signaling that the strain still evolves in swine, not humans
and that there are multiple strains circulating in swine with frequent reassortments
but apparantly only some of them can go to humans,
(since the human sequences do cluster and many variations seen in swine
do not appear in humans)
today uploaded to genbank:
A/MN/19/2011/11/04(H3N2) which does not have the segment 7 from ******
A/WV/06/2011/11/21(H1N2) which is similar to the Iowa viruses from Nov.,
but with different segments 6(KA/13) , 1(MN/19,ME),8(Sw/NY,ME)