Re: Sequences at Genbank!
South America:
-----experimenting-----------
85 >A/Rio Grande do Sul/7019/2009/07/29 - ---- - G.........T...T.. --- ---------- ------ --
86 >A/Rio Grande do Sul/5395/2009/07/23 - ---- - G.........T...T.. --- ---------- ------ --
87 >A/Rio de Janeiro/9685/2009/08/10 - ---- - G.........T...T.. --- ---------- ------ --
89 >A/Parana/4597/2009/07/12 - ---- - G.........T...T.. --- ---------- ------ --
49 >A/Sao Paulo/43812/2009/07/03 - ---- - ..........T..GT.. --- ---------- ------ --
52 >A/Minas Gerais/65/2009/04/27 - ---- - ---------........ --- ---------- ...CTC --
qwertzuiopüasdfghjklöäyxcvbnm,.-<#+QWERTZUIOPÜÄ*'ÖLKJHGFSDAYXCVBNNM ;:_>
South America:
Code:
2 0011 1 00000000000111111 011 0000000000 000000 00 1 8838 2 01345667789112445 212 1223577788 466888 34 6 4569 6 04939571173048025 944 5231944559 906112 61 3 4569 3 45026825610731887 838 0036127654 200563 74 -codon-position-------------------------------- 1 1 11 21 121 1 1 121 1 2 1 1 ---Index---------------------------------------G CTCT C ACGCCTCGAGGCCACAG GGG TTAGCAAATC GGGACT AT 1 >A/******/index/2009/02/01 . .... . ................. ... .......... ...... .. 47 >A/Sao Paulo/53823/2009/08/01 - ---- - G.........T...T.. --- ---------- ------ -- 79 >A/Rio de Janeiro/2459/2009/07/02 - ---- - G.........T...T.. --- ---------- ------ -- 80 >A/Sao Paulo/2233/2009/05/27 - ---- - G.........T...T.. --- ---------- ------ -- 81 >A/Sao Paulo/53838/2009/08/01 - ---- - G......A..T...T.. --- ---------- ------ -- 82 >A/Sao Paulo/57831/2009/08/09 - ---- - G.........T...T.. --- ---------- ------ -- 83 >A/Santa Catarina/423/2009 /06/01 - ---- - G.........T...T.. --- ---------- ------ -- 84 >A/Rio de Janeiro/5090/2009/07/23 - ---- - G.........T...T.. --- ---------- ------ -- 85 >A/Rio Grande do Sul/7019/2009/07/29 - ---- - G.........T...T.. --- ---------- ------ -- 86 >A/Rio Grande do Sul/5395/2009/07/23 - ---- - G.........T...T.. --- ---------- ------ -- 87 >A/Rio de Janeiro/9685/2009/08/10 - ---- - G.........T...T.. --- ---------- ------ -- 89 >A/Parana/4597/2009/07/12 - ---- - G.........T...T.. --- ---------- ------ -- 49 >A/Sao Paulo/43812/2009/07/03 - ---- - ..........T..GT.. --- ---------- ------ -- 52 >A/Minas Gerais/65/2009/04/27 - ---- - ---------........ --- ---------- ...CTC -- 48 >A/Rio de Janeiro/290/2009/05/24 - ---- - ----------------- --- ---------- AA.CTC -- 50 >A/Rio de Janeiro/125/2009/05/06 - ---- - ----------------- --- ---------- ...CT- -- 76 >A/Rio de Janeiro/118/2009/05/05 - ---- - ----------------- --- ---------- ...CT- -- 78 >A/Santa Catarina/296/2009/05/25 - ---- - ----------------- --- ---------- ...CTC -- 90 >A/Rio de Janeiro/332/2009/05/30 - ---- - ----------------- --- ---------- AA.CTC -- 92 >A/Rio de Janeiro/307/2009/05/27 - ---- - ----------------- --- ---------- AA.CT- -- 91 >A/Chile/9113/2009/05/19 - ---- - .A.........------ --- .......... ------ -- 11 >A/Colombia/08/2009/04/25 - ---- - -A..-......------ --- --------.. ------ -- 16 >A/Sao Paulo/1454/2009/04/29 - ---- - ..............T.. --- ...A.G.... ...... -- 6 >A/La Paz/WR0096T/2009/06/22 . TG.. . ..............T.. AA. ...A.G.... ...... .. 9 >A/Sao Paulo/2303/2009/06/01 - ---- - ..............T.. --- ...A.G.... ...... -- 15 >A/Parana/2529/2009/06/30 - ---- - ....A.........T.. --- ---------- ------ -- 88 >A/Guayaquil/1/2009/05/ - ---- - -.........T------ --- ---------- ------ -- 5 >A/Guayaquil/2/2009/07/ - ---- - -..........------ --- ---------- ------ -- 7 >A/Guayaquil/3/2009/07/ - ---- - ...........------ --- ---------- ------ -- 8 >A/Bogota/224/2009/04/25 - ---- - -----......------ --- ---------- ------ -- 10 >A/Colombia/213/2009/04/30 - ---- - -----......------ --- ---------- ------ -- 12 >A/Bogota/176/2009/04/27 - ---- - -----......------ --- --------.. ------ -- 13 >A/Guayaquil/4/2009/07/ - ---- - -..........------ --- ---------- ------ -- 14 >A/Colombia/450/2009/05/06 - ---- - -----......------ --- --------.. ------ -- 46 >A/Argentina/Malbran017/2009// - ---- - ----------------- --- ---------- ...--- -- 2 >A/Argentina/HNRG42/2009/06/27 - ---- - .....A.....T..TG. --- ...A--GG.. AAA... -- 4 >A/Argentina/HNRG36/2009/06/21 - ---- - .....A........TG. --- ...A--GG.. AA.... -- 17 >A/Chile/8886/2009/05/18 - ---- - .....A.....------ --- ...A.G.... ------ -- 3 >A/Guayaquil/5/2009/07/ - ---- - -....A.....------ --- ---------- ------ -- 37 >A/Sao Paulo/55115/2009/08/05 - ---- - .....A........T.. --- ---------- ------ -- 35 >A/Sao Paulo/2261/2009/05/29 - ---- - .....A........T.. --- ---------- ------ -- 33 >A/Sao Paulo/2275/2009/05/29 - ---- - .....A........T.. --- ---------- ------ -- 31 >A/Santa Catarina/460/2009/06/10 - ---- - .....A........T.. --- ---------- ------ -- 18 >A/Sao Paulo/54392/2009/08/01 - ---- - .....A........T.A --- ---------- ------ -- 19 >A/Rio Grande do Sul/4509/2009/07/18 - ---- - ....AA........T.A --- ---------- ------ -- 20 >A/turkey/Chile/28317-6504-3/2009/08/17 A .... T .....A........T.- AAA ...A.G.... AA.... GC 21 >A/Argentina/HNRG3/2009/06/18 A ...C T .....A........T.. AAA ...A.G..A. AA.... GC 22 >A/Bogota/0466N/2009/06/25 A ..A. . ..A..AT..A..T.T.. AAA CC.A.G.... AA.... G. 23 >A/Bogota/WR0090N/2009/06/16 A TGA. . ..A..AT..A..T.T.. AAA CC.A.G.... AA.... G. 24 >A/Argentina/HNRG45/2009/06/16 - ---- - .....A........T.. --- ...A.G.... AA.... -- 25 >A/Chile/8947/2009/05/17 - ---- - .....A.....------ --- ...A.G.... ------ -- 26 >A/Mato Grosso/2329/2009/05/28 - ---- - .....A........T.. --- ...A.G.... ------ -- 27 >A/Chile/8949/2009/05/18 - ---- - .....A.....------ --- ...A.G.... ------ -- 28 >A/Argentina/HNRG44/2009/06/30 - ---- - .....A.....T..T.. --- ...A.G.... AA.... -- 29 >A/Argentina/HNRG39/2009/06/23 - ---- - .....A.....T..T.. --- ...A..GG.. AA.... -- 30 >A/Argentina/HNRG32/2009/06/22 - ---- - .....A........T.. --- ...A..GG.. AA.... -- 32 >A/Argentina/HNRG5/2009/06/22 - ---- - .....A........T.. --- ...A-.GG.T AA.... -- 34 >A/Argentina/HNRG48/2009/06/25 - ---- - .....A........T.. --- ...AT.GG.T AA.... -- 36 >A/Argentina/HNRG13/2009/06/05 A ...C T .....A........T.. AAA ..GA.G.G.. AA.... GC 38 >A/Argentina/HNRG18/2009/07/01 - ---- - .....A........T.. --- -..A-.GG.. AA.... -- 39 >A/Sao Paulo/53845/2009/08/02 - ---- - .....A.A......T.. --- ---------- ------ -- 40 >A/Argentina/HNRG8/2009/06/11 - ---- - .....A.A......--- --- ...ATG..A. AA.... -- 41 >A/Castro/JXP/2009/06/11 - .... - .....A........T.. --- ---------- ------ -- 42 >A/Argentina/HNRG20/2009/06/19 - ---- - .....A........T.- --- ..GA-.GG.. AA.... -- 43 >A/Argentina/HNRG30/2009/06/17 - ---- - .....A........T.- --- -----.GG.. AA.... -- 44 >A/Argentina/HNRG37/2009/06/22 - ---- - .....A........T.. --- -----.GG.. AA.... -- 45 >A/Santiago/3221/2009/06/30 - ---- - -....A.....------ A-- ---------- ---... -- 51 >A/Sao Paulo/55312/2009/08/05 - ---- - .....A........T.. --- ---------- ------ -- 53 >A/Sao Paulo/53225/2009/08/01 - ---- - .....A..G.....T.. --- ---------- ------ -- 54 >A/Argentina/HNRG16/2009/06/29 - ---- - .....A..G.....T.. --- ...A.G.... AA.... -- 55 >A/Rio de Janeiro/5826/2009/07/28 - ---- - .....A..G....GT.. --- ---------- ------ -- 56 >A/Sao Paulo/53206/2009/07/19 - ---- - .....A..G.....T.. --- ---------- ------ -- 58 >A/Santa Catarina/459/2009/06/11 - ---- - .....A........T.. --- ---------- ------ -- 60 >A/Rio Grande do Sul/4782/2009/07/20 - ---- - .....A........T.. --- ---------- ------ -- 62 >A/Rio Grande do Sul/7108/2009/07/29 - ---- - .....A........T.. --- ---------- ------ -- 64 >A/Sao Paulo/2193/2009/05/29 - ---- - .....A........T.. --- ---------- ------ -- 57 >A/Argentina/HNRG31/2009/06/17 - ---- - .....A........T.. --- ...A--GG.. AA.... -- 59 >A/Argentina/HNRG41/2009/06/26 - ---- - .....A........T.. --- ...A...... AAA... -- 61 >A/Argentina/HNRG14/2009/05/27 - ---- - .....A........T.. --- ...A-.GG.. AA.... -- 63 >A/Argentina/HNRG33/2009/06/24 - ---- - .....A........T.. --- ...A-.GG.. AA.... -- 66 >A/Argentina/HNRG17/2009/06/01 - ---- - .....A........T.. --- -----.GG.. AA.... -- 67 >A/Argentina/HNRG21/2009/07/01 - ---- - .....A........T.. --- ...A-.GG.. AA.... -- 65 >A/Argentina/HNRG40/2009/06/24 - ---- - .....A........T.. --- ...AT.GG.. AA.... -- 68 >A/Argentina/HNRG23/2009/07/27 - ---- - ...T.A........T.. --- ------GGA. AA.... -- 69 >A/Argentina/HNRG15/2009/07/20 - ---- - ...T.A........T.. --- ...AT.GGA. AA.... -- 70 >A/Rio de Janeiro/290/2009 /05/24 - ---- - ----.A........T.. --- ---------- ------ -- 71 >A/Rio Grande do Sul/4772/2009/07/20 - ---- - .....A........T.. --- ---------- ------ -- 72 >A/Santa Catarina/478/2009/06/11 - ---- - --...A........T.. --- ---------- ------ -- 73 >A/Sao Paulo/2056/2009/05/20 - ---- - .....A........T.. --- ---------- ------ -- 74 >A/Distrito Federal/2611/2009/06/05 - ---- - .....A........T.. --- ...A.G.... ------ -- 75 >A/Puerto Montt/Bio87/2009/06/19 - ---- - .....A........T.. --- ---------- ------ -- 77 >A/Santiago/2009/2009/06/18 - ---- - -....A.....------ --- ---------- ------ -- 93 >A/Santiago/3827/2009/07/07 - ---- - --...A......----- --- ---------- ------ -- 94 >A/Cancun--Y/Index/2009/04/15 A .... . .....A........T.. AAA ...A.G.... AA.... G. ---Index---------------------------------------G CTCT C ACGCCTCGAGGCCACAG GGG TTAGCAAATC GGGACT AT -codon-position-------------------------------- 1 1 11 21 121 1 1 121 1 2 1 1 2 0011 1 00000000000111111 011 0000000000 000000 00 1 8838 2 01345667789112445 212 1223577788 466888 34 6 4569 6 04939571173048025 944 5231944559 906112 61 3 4569 3 45026825610731887 838 0036127654 200563 74
-----experimenting-----------
85 >A/Rio Grande do Sul/7019/2009/07/29 - ---- - G.........T...T.. --- ---------- ------ --
86 >A/Rio Grande do Sul/5395/2009/07/23 - ---- - G.........T...T.. --- ---------- ------ --
87 >A/Rio de Janeiro/9685/2009/08/10 - ---- - G.........T...T.. --- ---------- ------ --
89 >A/Parana/4597/2009/07/12 - ---- - G.........T...T.. --- ---------- ------ --
49 >A/Sao Paulo/43812/2009/07/03 - ---- - ..........T..GT.. --- ---------- ------ --
52 >A/Minas Gerais/65/2009/04/27 - ---- - ---------........ --- ---------- ...CTC --
qwertzuiopüasdfghjklöäyxcvbnm,.-<#+QWERTZUIOPÜÄ*'ÖLKJHGFSDAYXCVBNNM ;:_>
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