Cocirculation of Influenza Viruses

[gsgs]

Re: Cocirculation of Influenza Viruses

country-graphs here:

http://gamapserver.who.int/gareports/Default.aspx?ReportNo=1

(hattip Lisa Schirring)

[gsgs]

Re: Cocirculation of Influenza Viruses

week 12:

~60% is H3 in North America
~90% is H3 in Europe
~20% is H3 in East Asia, ~70% is B
India Mx=pdm98:0,0,2,0,1,1,0,2,2,9,27

http://apps.who.int/globalatlas/autologin/flunet_login.asp

all: 115 countries
(H1): 0,0,0,0,1,0,0,0,0,0,0,0,0 
(H3): 1181,1654,2474,2303,2750,2957,3176,3655,3805,3516,2649,1656,256 
(Mx): 326,616,766,996,920,873,660,641,708,642,517,237,7 
(A ): 1795,2545,3671,3788,4593,5207,6046,7228,7903,7192,5514,3590,281 
(B ): 991,1474,1180,1093,1890,2239,2856,3207,3063,2700,1082,1080,232 
%Mx(A): 21.6,27.1,23.6,30.1,25,22.7,17.2,14.9,15.6,15.4,16.3,12.5,2.6 
%B: 35.5,36.6,24.3,22.3,29.1,30,32,30.7,27.9,27.2,16.4,23.1,45.2 

North America: 3 countries
(H1): 0,0,0,0,0,0,0,0,0,0,0,0,0 
(H3): 173,225,286,347,476,506,585,800,1073,1203,1076,296,0 
(Mx): 266,539,696,923,855,804,555,542,590,485,360,139,0 
(A ): 509,840,1082,1438,1561,1589,1566,1910,2448,2615,2027,813,0 
(B ): 47,59,57,76,137,162,230,292,512,646,157,99,0 
%Mx(A): 60.5,70.5,70.8,72.6,64.2,61.3,48.6,40.3,35.4,28.7,25,31.9,- 
%B: 8.4,6.5,5,5,8,9.2,12.8,13.2,17.2,19.8,7.1,10.8,- 

Middle America: 9 countries
(H1): 0,0,0,0,0,0,0,0,0,0,0,0,0 
(H3): 27,11,17,13,7,9,8,1,0,2,0,0,0 
(Mx): 8,5,9,5,5,3,7,4,14,29,37,2,0 
(A ): 36,16,26,18,12,12,15,9,21,37,51,2,0 
(B ): 4,1,1,1,1,8,1,5,7,7,10,0,0 
%Mx(A): 22.8,31.2,34.6,27.7,41.6,25,46.6,80,100,93.5,100,100,- 
%B: 10,5.8,3.7,5.2,7.6,40,6.2,35.7,25,15.9,16.3,0,- 

South America: 9 countries
(H1): 0,0,0,0,0,0,0,0,0,0,0,0,0 
(H3): 30,35,21,8,13,16,14,16,13,13,6,8,10 
(Mx): 11,15,9,7,9,14,10,6,10,10,6,3,4 
(A ): 41,54,31,17,25,34,30,25,24,26,14,16,18 
(B ): 3,8,3,3,7,1,10,8,17,21,8,0,0 
%Mx(A): 26.8,30,30,46.6,40.9,46.6,41.6,27.2,43.4,43.4,50,27.2,28.5 
%B: 6.8,12.9,8.8,15,21.8,2.8,25,24.2,41.4,44.6,36.3,0,0 

Europe: 41 countries
(H1): 0,0,0,0,0,0,0,0,0,0,0,0,0 
(H3): 303,470,700,1018,1244,1562,1739,2039,1995,1652,1393,1029,10 
(Mx): 10,21,16,27,26,14,35,54,54,42,44,39,0 
(A ): 477,654,1007,1337,1933,2627,3473,4374,4561,3677,3165,2368,21 
(B ): 22,22,36,67,81,131,169,253,259,281,295,380,0 
%Mx(A): 3.1,4.2,2.2,2.5,2,.8,1.9,2.5,2.6,2.4,3,3.6,0 
%B: 4.4,3.2,3.4,4.7,4,4.7,4.6,5.4,5.3,7,8.5,13.8,0 

North Africa: 6 countries
(H1): 0,0,0,0,1,0,0,0,0,0,0,0,0 
(H3): 54,62,57,38,23,9,13,16,9,6,5,0,0 
(Mx): 0,0,0,0,0,1,0,0,0,0,0,1,0 
(A ): 54,62,58,38,24,10,13,16,9,6,5,1,0 
(B ): 0,1,0,1,0,1,1,2,1,1,0,1,0 
%Mx(A): 0,0,0,0,0,10,0,0,0,0,0,100,- 
%B: 0,1.5,0,2.5,0,9,7.1,11.1,10,14.2,0,50,- 

South Africa: 18 countries
(H1): 0,0,0,0,0,0,0,0,0,0,0,0,0 
(H3): 12,8,12,10,12,13,27,20,32,30,7,13,0 
(Mx): 4,6,10,15,7,6,8,7,2,3,8,3,0 
(A ): 20,17,24,29,20,21,40,30,37,33,17,16,0 
(B ): 7,8,2,10,16,22,15,12,14,7,8,1,0 
%Mx(A): 25,42.8,45.4,60,36.8,31.5,22.8,25.9,5.8,9,53.3,18.7,- 
%B: 25.9,32,7.6,25.6,44.4,51.1,27.2,28.5,27.4,17.5,32,5.8,- 

Ozeania: 5 countries
(H1): 0,0,0,0,0,0,0,0,0,0,0,0,0 
(H3): 40,30,51,12,11,16,7,5,6,3,8,3,0 
(Mx): 12,8,8,6,2,5,4,2,3,0,1,0,0 
(A ): 52,38,59,19,13,21,11,9,9,3,9,3,0 
(B ): 22,27,20,30,10,17,29,22,17,13,19,7,0 
%Mx(A): 23,21,13.5,33.3,15.3,23.8,36.3,28.5,33.3,0,11.1,0,- 
%B: 29.7,41.5,25.3,61.2,43.4,44.7,72.5,70.9,65.3,81.2,67.8,70,- 

West Asia: 8 countries
(H1): 0,0,0,0,0,0,0,0,0,0,0,0,0 
(H3): 135,63,108,56,46,23,30,39,24,23,11,15,0 
(Mx): 6,14,7,5,5,6,13,7,12,25,30,43,0 
(A ): 168,87,120,66,59,41,59,60,56,69,48,72,0 
(B ): 20,24,37,33,39,34,48,30,33,27,25,29,10 
%Mx(A): 4.2,18.1,6,8.1,9.8,20.6,30.2,15.2,33.3,52,73.1,74.1,- 
%B: 10.6,21.6,23.5,33.3,39.7,45.3,44.8,33.3,37,28.1,34.2,28.7,100 

East Asia: 16 countries
(H1): 0,0,0,0,0,0,0,0,0,0,0,0,0 
(H3): 407,750,1222,801,918,803,753,719,653,584,143,292,236 
(Mx): 9,8,11,8,11,20,28,19,23,48,31,7,3 
(A ): 438,777,1264,826,946,852,839,795,738,726,178,299,242 
(B ): 866,1324,1024,872,1599,1863,2353,2583,2203,1697,560,563,222 
%Mx(A): 2.1,1,.8,.9,1.1,2.4,3.5,2.5,3.4,7.5,17.8,2.3,1.2 
%B: 66.4,63,44.7,51.3,62.8,68.6,73.7,76.4,74.9,70,75.8,65.3,47.8

[gsgs]

Re: Cocirculation of Influenza Viruses

all: 106 countries
(H1): 0,0,0,0,1,0,0,0,0,0,0 
(H3): 1165,1606,2372,2199,2528,2685,2823,3055,2030,0,0 
(Mx): 340,595,750,977,880,816,577,485,288,1,0 
(A ): 1796,2477,3563,3673,4282,4831,5517,6240,4372,1,0 
(B ): 987,1464,1155,1061,1761,2067,2616,2464,761,0,0 
%Mx(A): 22.5,27,24,30.7,25.8,23.3,16.9,13.7,12.4,100,- 
%B: 35.4,37.1,24.4,22.4,29.1,29.9,32.1,28.3,14.8,0,- 

North America: 3 countries
(H1): 0,0,0,0,0,0,0,0,0,0,0 
(H3): 170,223,271,333,375,398,414,543,389,0,0 
(Mx): 268,522,685,911,822,765,488,411,242,0,0 
(A ): 514,823,1063,1420,1375,1386,1220,1329,1000,0,0 
(B ): 47,59,57,76,57,59,64,63,54,0,0 
%Mx(A): 61.1,70,71.6,73.2,68.6,65.7,54.1,43,38.3,-,- 
%B: 8.3,6.6,5,5,3.9,4,4.9,4.5,5.1,-,- 

Middle America: 9 countries
(H1): 0,0,0,0,0,0,0,0,0,0,0 
(H3): 27,11,17,13,7,9,8,1,0,0,0 
(Mx): 8,5,9,5,5,2,5,1,1,0,0 
(A ): 36,16,26,18,12,12,13,2,1,0,0 
(B ): 2,1,1,1,1,7,3,0,0,0,0 
%Mx(A): 22.8,31.2,34.6,27.7,41.6,18.1,38.4,50,100,-,- 
%B: 5.2,5.8,3.7,5.2,7.6,36.8,18.7,0,0,-,- 

South America: 9 countries
(H1): 0,0,0,0,0,0,0,0,0,0,0 
(H3): 40,38,21,9,3,7,5,5,2,0,0 
(Mx): 27,19,13,14,8,6,6,3,0,0,0 
(A ): 67,61,35,25,14,15,17,11,2,0,0 
(B ): 3,8,3,4,7,1,10,5,0,0,0 
%Mx(A): 40.2,33.3,38.2,60.8,72.7,46.1,54.5,37.5,0,-,- 
%B: 4.2,11.5,7.8,13.7,33.3,6.2,37,31.2,0,-,- 

Europe: 41 countries
(H1): 0,0,0,0,0,0,0,0,0,0,0 
(H3): 303,470,699,1015,1238,1541,1698,1922,1440,0,0 
(Mx): 10,21,16,27,26,14,35,51,26,0,0 
(A ): 477,654,1006,1336,1931,2617,3449,4249,3130,0,0 
(B ): 23,22,35,68,81,126,171,270,213,0,0 
%Mx(A): 3.1,4.2,2.2,2.5,2,.9,2,2.5,1.7,-,- 
%B: 4.6,3.2,3.3,4.8,4,4.5,4.7,5.9,6.3,-,- 

North Africa: 5 countries
(H1): 0,0,0,0,1,0,0,0,0,0,0 
(H3): 54,62,55,38,19,7,8,14,0,0,0 
(Mx): 0,0,0,0,0,0,0,0,0,0,0 
(A ): 54,62,56,38,20,7,8,14,0,0,0 
(B ): 0,0,0,1,0,0,0,0,0,0,0 
%Mx(A): 0,0,0,0,0,0,0,0,-,-,- 
%B: 0,0,0,2.5,0,0,0,0,-,-,- 

South Africa: 12 countries
(H1): 0,0,0,0,0,0,0,0,0,0,0 
(H3): 8,7,12,7,7,8,20,7,10,0,0 
(Mx): 4,6,8,11,4,5,9,5,0,0,0 
(A ): 16,16,22,23,12,14,36,15,10,0,0 
(B ): 13,10,2,4,7,10,8,4,5,0,0 
%Mx(A): 33.3,46.1,40,61.1,36.3,38.4,31,41.6,0,-,- 
%B: 44.8,38.4,8.3,14.8,36.8,41.6,18.1,21,33.3,-,- 

Ozeania: 5 countries
(H1): 0,0,0,0,0,0,0,0,0,0,0 
(H3): 31,24,37,5,4,0,0,2,4,0,0 
(Mx): 8,2,4,0,0,0,1,1,0,0,0 
(A ): 39,27,45,6,4,0,1,5,4,0,0 
(B ): 18,24,15,20,3,7,10,10,9,0,0 
%Mx(A): 20.5,7.6,9.7,0,0,-,100,33.3,0,-,- 
%B: 31.5,47,25,76.9,42.8,100,90.9,66.6,69.2,-,- 

West Asia: 7 countries
(H1): 0,0,0,0,0,0,0,0,0,0,0 
(H3): 135,63,108,56,46,23,30,19,15,0,0 
(Mx): 6,12,4,1,4,4,6,2,6,1,0 
(A ): 165,83,116,59,57,39,48,34,40,1,0 
(B ): 15,22,21,30,30,27,37,20,20,0,0 
%Mx(A): 4.2,16,3.5,1.7,8,14.8,16.6,9.5,28.5,100,- 
%B: 8.3,20.9,15.3,33.7,34.4,40.9,43.5,37,33.3,0,- 

East Asia: 15 countries
(H1): 0,0,0,0,0,0,0,0,0,0,0 
(H3): 397,708,1152,723,829,692,640,542,170,0,0 
(Mx): 9,8,11,8,11,20,27,11,13,0,0 
(A ): 428,735,1194,748,857,741,725,581,185,0,0 
(B ): 866,1318,1021,857,1575,1830,2313,2092,460,0,0 
%Mx(A): 2.2,1.1,.9,1,1.3,2.8,4,1.9,7.1,-,- 
%B: 66.9,64.1,46,53.3,64.7,71.1,76.1,78.2,71.3,-,-

the old H1 in week 5 was in Sierra Leone

USA,H3:102,137,181,240,346,387,407,538,388
USA,H1:12,29,42,69,94,121,147,207,211
Mexico,H3:9,13,22,28,29,11,7,5,1
Mexico,H1:248,484,634,815,728,644,341,204,31

[gsgs]

Re: Cocirculation of Influenza Viruses

Mexico H1 weeks 48-07 :
4,22,62,73,111,233,456,607,743,503,143,1

[gsgs]

Re: Cocirculation of Influenza Viruses

this is to detect the waves of flu-circulation, H5N1 and H3N2v
are too sparse for waves. Those are occasional, random
introductions from bird or swine into humans.

But I could occasionally make a list of H5N1 separately
(H3N2v is not at flunet).

Or replace H1N1 (old) by H5N1 , if H1N1 dies.

Or remove H1N1 (old) entirely

So the next update should have H5N1 instead of H1N1,
(if I remember)


-------------------

no H5 reports before 2009

2009
all: 75 countries
(H5): 0,0,0,0,1,1,1,0,0,2,1,1,1,3,1,2,3,0,0,3,3,3,2,1,1,0,0,0,0,0,2,0,0,0,2,0,0,1,1,0,0,0,0,0,0,0,1,1,0,1,1,0,0 
North Africa: 4 countries
(H5): 0,0,0,0,1,1,1,0,0,2,1,1,1,3,1,2,3,0,0,3,3,3,2,1,1,0,0,0,0,0,2,0,0,0,2,0,0,1,1,0,0,0,0,0,0,0,1,1,0,0,1,0,0 
East Asia: 8 countries
(H5): 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0 

2010
all: 93 countries
(H5): 0,2,1,0,2,2,3,2,1,2,0,2,1,0,0,1,0,0,0,0,0,1,0,0,0,0,0,0,1,0,1,0,0,1,0,0,0,0,0,0,0,0,0,0,0,1,0,1,0,1,1,3
North Africa: 5 countries
(H5): 0,2,0,0,2,2,3,1,1,2,0,2,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,1,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,1,1,3 
South Africa: 17 countries
(H5): 0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 
East Asia: 10 countries
(H5): 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1,0,0,0,0,0,0 

2011
all: 101 countries
(H5): 1,1,1,2,0,2,0,5,1,2,4,2,4,2,1,1,0,0,1,1,0,3,2,1,0,0,0,0,1,1,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0
North Africa: 4 countries
(H5): 1,1,1,2,0,1,0,3,1,2,4,2,4,1,1,0,0,0,1,1,0,3,1,1,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0
East Asia: 12 countries
(H5): 0,0,0,0,0,1,0,2,0,0,0,0,0,1,0,1,0,0,0,0,0,0,1,0,0,0,0,0,1,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0

2012
all: 78 countries
(H5): 0,0,2,0,0,0 
East Asia: 10 countries
(H5): 0,0,2,0,0,0

[sharon sanders]

Re: Cocirculation of Influenza Viruses

I would like to suggest that maybe you add the known cases of H5N1 and the swine H3N2 cases documented by the US (total 12) since these are also circulating strains. H5N1 has a high case fatality rate compared to seasonal strains. Swine H3N2 is apparently so mild that the documented cases may be only a fraction of the total case count.

[gsgs]

Re: Cocirculation of Influenza Viruses

the link is in the first post of this thread.

http://apps.who.int/globalatlas/autologin/flunet_login.asp

login to flunet and walk through the menus ...

H5N1 is available, but not chosen by me.
H3N2v is not available, afaik

.................................................. .......

login, then "data query" (top left)

and you get a menu:

Indicators
Select/Deselect All

Number of specimens received/collected
Number of specimens processed
Number of influenza viruses detected
A(H1)
A(H3)
A(H1N1)pdm09
A(H5)
A (not suptyped)
Total A (seasonal and non-seasonal influenza)
B (Yamagata lineage)
B (Victoria lineage)
B (Lineage not determined)
Total B
Total (seasonal and non-seasonal influenza)
Influenza-like illness
Level


for my program I choose
H1,H3,pH1,totalA,totalB
then (next menu) all countries

It's tedious to save all the data, only 500 entries per page,
usually 10-25 pages. I can upload the whole datafiles, if someone wants them.
Recently I wrote a new program for the continents, so that's available in future :-)

[sharon sanders]

Re: Cocirculation of Influenza Viruses

Thanks Gs. Could you post the links to your sources at the bottom of each post please?

And do you factor in any A/H5N1? Or A/H3N2?

[gsgs]

Re: Cocirculation of Influenza Viruses

all: 80 countries
(H1): 0,0,0,0,0,0
(H3): 1099,1458,1966,1745,1473,0
(Mx): 303,549,678,765,221,0
(A ): 1695,2297,3084,2987,2531,0
(B ): 980,1443,1100,699,166,0
%Mx(A): 21.6,27.3,25.6,30.4,13,-
%B: 36.6,38.5,26.2,18.9,6.1,-

North America: 2 countries
(H1): 0,0,0,0,0,0
(H3): 164,214,256,275,180,0
(Mx): 251,484,641,718,198,0
(A ): 489,774,993,1144,518,0
(B ): 47,56,57,67,22,0
%Mx(A): 60.4,69.3,71.4,72.3,52.3,-
%B: 8.7,6.7,5.4,5.5,4,-

Middle America: 8 countries
(H1): 0,0,0,0,0,0
(H3): 27,11,0,0,0,0
(Mx): 7,5,1,3,0,0
(A ): 35,16,1,3,0,0
(B ): 2,1,0,0,0,0
%Mx(A): 20.5,31.2,100,100,-,-
%B: 5.4,5.8,0,0,-,-

South America: 8 countries
(H1): 0,0,0,0,0,0
(H3): 36,24,3,0,3,0
(Mx): 19,13,2,2,2,0
(A ): 56,47,10,5,8,0
(B ): 0,6,0,1,0,0
%Mx(A): 34.5,35.1,40,100,40,-
%B: 0,11.3,0,16.6,0,-

Europe: 34 countries
(H1): 0,0,0,0,0,0
(H3): 303,460,677,969,949,0
(Mx): 10,21,16,27,21,0
(A ): 478,653,995,1308,1660,0
(B ): 23,23,35,66,74,0
%Mx(A): 3.1,4.3,2.3,2.7,2.1,-
%B: 4.5,3.4,3.3,4.8,4.2,-

North Africa: 2 countries
(H1): 0,0,0,0,0,0
(H3): 51,58,52,31,10,0
(Mx): 0,0,0,0,0,0
(A ): 51,58,52,31,10,0
(B ): 0,0,0,1,0,0
%Mx(A): 0,0,0,0,0,-
%B: 0,0,0,3.1,0,-

South Africa: 8 countries
(H1): 0,0,0,0,0,0
(H3): 8,7,9,6,3,0
(Mx): 4,6,7,11,0,0
(A ): 16,16,18,22,3,0
(B ): 13,10,1,3,1,0
%Mx(A): 33.3,46.1,43.7,64.7,0,-
%B: 44.8,38.4,5.2,12,25,-

Ozeania: 2 countries
(H1): 0,0,0,0,0,0
(H3): 5,7,13,3,3,0
(Mx): 0,0,0,0,0,0
(A ): 11,9,13,4,3,0
(B ): 15,19,9,5,1,0
%Mx(A): 0,0,0,0,0,-
%B: 57.6,67.8,40.9,55.5,25,-

West Asia: 5 countries
(H1): 0,0,0,0,0,0
(H3): 135,63,108,56,45,0
(Mx): 6,12,4,0,0,0
(A ): 161,83,116,58,49,0
(B ): 15,20,20,15,18,0
%Mx(A): 4.2,16,3.5,0,0,-
%B: 8.5,19.4,14.7,20.5,26.8,-

East Asia: 11 countries
(H1): 0,0,0,0,0,0
(H3): 370,614,848,405,280,0
(Mx): 6,8,7,4,0,0
(A ): 398,641,886,412,280,0
(B ): 865,1308,978,541,50,0
%Mx(A): 1.5,1.2,.8,.9,0,-
%B: 68.4,67.1,52.4,56.7,15.1,-

[gsgs]

Re: Cocirculation of Influenza Viruses

weeks 41-52,2011 :

all: 96 countries
(H1): 0,0,0,0,0,0,2,1,0,0,0,0
(H3): 406,361,340,304,267,337,341,394,472,523,449,345
(Mx): 322,449,338,280,181,127,79,45,46,34,21,0
(A ): 830,889,774,646,511,519,495,497,611,657,574,363
(B ): 426,432,403,370,360,347,300,318,327,268,137,121
%Mx(A): 44.2,55.4,49.8,47.9,40.4,27.3,18.7,10.2,8.8,6.1,4. 4,0
%B: 33.9,32.7,34.2,36.4,41.3,40,37.7,39,34.8,28.9,19.2 ,25

North America: 2 countries
(H1): 0,0,0,0,0,0,0,0,0,0,0,0
(H3): 8,11,14,23,20,16,32,28,33,55,36,0
(Mx): 0,2,0,3,4,5,4,1,16,22,6,0
(A ): 14,25,34,37,44,44,72,55,79,108,94,0
(B ): 8,11,15,12,19,18,22,17,18,17,7,0
%Mx(A): 0,15.3,0,11.5,16.6,23.8,11.1,3.4,32.6,28.5,14.2,-
%B: 36.3,30.5,30.6,24.4,30.1,29,23.4,23.6,18.5,13.6,6. 9,-

Middle America: 9 countries
(H1): 0,0,0,0,0,0,0,0,0,0,0,0
(H3): 39,47,49,24,24,16,16,17,13,25,0,0
(Mx): 113,219,146,98,80,38,18,8,8,2,0,0
(A ): 152,266,195,122,104,54,35,25,22,27,0,0
(B ): 8,0,0,2,6,5,1,3,1,0,0,0
%Mx(A): 74.3,82.3,74.8,80.3,76.9,70.3,52.9,32,38,7.4,-,-
%B: 5,0,0,1.6,5.4,8.399999,2.7,10.7,4.3,0,-,-

South America: 8 countries
(H1): 0,0,0,0,0,0,0,0,0,0,0,0
(H3): 25,9,20,17,13,16,20,15,21,9,0,0
(Mx): 103,71,60,60,37,26,31,11,5,1,0,0
(A ): 190,106,107,82,67,45,52,26,30,15,0,0
(B ): 18,33,24,22,12,27,16,26,4,3,0,0
%Mx(A): 80.4,88.7,75,77.9,74,61.9,60.7,42.3,19.2,10,-,-
%B: 8.600001,23.7,18.3,21.1,15.1,37.5,23.5,50,11.7,16. 6,-,-

Europe: 34 countries
(H1): 0,0,0,0,0,0,0,0,0,0,0,0
(H3): 5,10,14,8,8,30,33,40,52,93,100,27
(Mx): 1,4,5,1,11,4,1,3,6,2,0,0
(A ): 9,16,25,20,29,41,44,62,94,146,149,41
(B ): 8,8,12,7,12,12,10,11,7,13,11,1
%Mx(A): 16.6,28.5,26.3,11.1,57.8,11.7,2.9,6.9,10.3,2.1,0,0
%B: 47,33.3,32.4,25.9,29.2,22.6,18.5,15,6.9,8.100001,6 .8,2.3

North Africa: 5 countries
(H1): 0,0,0,0,0,0,0,0,0,0,0,0
(H3): 3,9,2,6,1,6,5,4,9,7,16,7
(Mx): 0,1,1,2,0,0,0,0,0,0,0,0
(A ): 3,10,3,8,1,6,5,4,9,7,16,7
(B ): 1,0,1,1,0,0,0,0,0,0,0,0
%Mx(A): 0,10,33.3,25,0,0,0,0,0,0,0,0
%B: 25,0,25,11.1,0,0,0,0,0,0,0,0

South Africa: 14 countries
(H1): 0,0,0,0,0,0,0,0,0,0,0,0
(H3): 81,83,88,49,49,68,38,30,13,8,1,0
(Mx): 22,68,30,36,14,17,8,7,3,3,0,0
(A ): 110,154,126,88,66,85,47,37,16,11,1,0
(B ): 201,145,115,50,54,34,21,24,10,12,3,0
%Mx(A): 21.3,45,25.4,42.3,22.2,20,17.3,18.9,18.7,27.2,0,-
%B: 64.6,48.4,47.7,36.2,45,28.5,30.8,39.3,38.4,52.1,75 ,-

Ozeania: 6 countries
(H1): 0,0,0,0,0,0,0,0,0,0,0,0
(H3): 74,42,16,26,18,22,16,17,34,11,3,25
(Mx): 18,19,3,6,3,1,2,3,0,1,1,0
(A ): 106,71,23,32,21,24,19,20,34,12,4,25
(B ): 32,32,33,9,2,9,5,5,2,1,4,4
%Mx(A): 19.5,31.1,15.7,18.7,14.2,4.3,11.1,15,0,8.3,25,0
%B: 23.1,31,58.9,21.9,8.600001,27.2,20.8,20,5.5,7.6,50 ,13.7

West Asia: 6 countries
(H1): 0,0,0,0,0,0,2,1,0,0,0,0
(H3): 6,9,3,15,19,25,27,60,72,145,185,103
(Mx): 0,4,23,23,3,8,0,0,0,0,1,0
(A ): 13,33,53,68,25,42,42,63,75,147,188,106
(B ): 3,4,0,3,0,5,6,10,6,12,10,10
%Mx(A): 0,30.7,88.4,60.5,13.6,24.2,0,0,0,0,.5,0
%B: 18.7,10.8,0,4.2,0,10.6,12.5,13.6,7.4,7.5,5,8.60000 1

East Asia: 12 countries
(H1): 0,0,0,0,0,0,0,0,0,0,0,0
(H3): 165,141,134,136,115,138,154,183,225,170,108,183
(Mx): 65,61,70,51,29,28,15,12,8,3,13,0
(A ): 233,208,208,189,154,178,179,205,252,184,122,184
(B ): 147,199,203,264,255,237,219,222,279,210,102,106
%Mx(A): 28.2,30.1,34.3,27.2,20.1,16.8,8.8,6.1,3.4,1.7,10.7 ,0
%B: 38.6,48.8,49.3,58.2,62.3,57.1,55,51.9,52.5,53.2,45 .5,36.5




H3 dominates now, i.e. in China,India
the 3 old H1N1 viruses are from Iran
Australia (summer !) reported 25 H3s in week 52

[gsgs]

Re: Cocirculation of Influenza Viruses

weeks 21-48

(H1): 0,0,0,0,0,0,1,1,0,0,0,0,0,1,0,1,0,0,0,0,0,0,0,0,0,0,2,0 
(H3): 118,109,146,146,200,239,291,328,344,372,327,321,339,354,311,395,368,387,349,361,354,317,271,228,211,222,168,6 
(Mx): 169,252,325,306,274,236,336,325,323,279,307,321,291,231,248,186,213,267,161,133,233,372,274,206,120,51,22,0 
(A ): 345,392,498,485,529,525,746,793,817,787,735,738,725,685,666,689,716,796,612,562,620,748,598,492,383,330,250,6 
(B ): 252,208,189,208,161,144,200,208,237,246,279,259,295,270,244,286,386,335,368,358,336,354,295,304,313,174,73,2 
%Mx(A): 58.8,69.8,69,67.6,57.8,49.6,53.5,49.6,48.4,42.8,48.4,50,46.1,39.4,44.3,31.9,36.6,40.8,31.5,26.9,39.6,53.9,50.2,47.4,36.2,18.6,11.4,0 
%B: 42.2,34.6,27.5,30,23.3,21.5,21.1,20.7,22.4,23.8,27.5,25.9,28.9,28.2,26.8,29.3,35,29.6,37.5,38.9,35.1,32.1,33,38.1,44.9,34.5,22.6,25

old H1 : Iran(week 27) , Nigeria (28),Indonesia(34),Uganda(36),Iran(47),Iran(47)


China:H3 and B
India:B
Thailand: had H3
Australia: had Mx,H3,B
NZ:had H3 and B
USA:H3,B
South Africa: had H3 and B
Vietnam: had Mx
Argentina:had H3
Chile: had Mx
Nicaragua:Mx since week 41
Japan:H3
Philippines: had Mx, now getting a bit H3 and B
Canada:H3 and B
Europe:H3 and B

[gsgs]

Re: Cocirculation of Influenza Viruses

H3 and H1 are coexisting with H3 getting the edge since week 34

China has H3 and B, almost no H1 (--->America)
India,Thailand have H3 (-->Europe)
Australia,Bolivia,Chile,Vietnam,Cambodia have H1
Argentina,Cuba have H3 ; Brazil,Kenya mixed
Bangla Desh has B

2011/10/02 , weeks 21...39
(H1): 0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0 
(H3): 113,104,132,146,190,222,264,310,315,330,282,263,251,235,254,286,166,165,6 
(Mx): 169,248,321,292,261,229,327,309,304,268,287,311,263,205,224,149,145,68,1 
(A ): 338,381,480,471,504,507,703,753,759,718,667,671,612,506,523,486,355,268,10 
(B ): 252,204,184,203,155,139,191,199,222,233,256,231,279,237,211,171,195,85,0 
%Mx(A): 59.9,70.4,70.8,66.6,57.8,50.7,55.2,49.9,49.1,44.8,50.4,54.1,51.1,46.5,46.8,34.2,46.6,29.1,14.2 
%B: 42.7,34.8,27.7,30.1,23.5,21.5,21.3,20.9,22.6,24.5,27.7,25.6,31.3,31.8,28.7,26,35.4,24,0

all: 101 countries
(H1): 0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0
(H3): 113,104,132,146,190,222,264,310,315,330,282,263,25 1,235,254,286,166,165,6
(Mx): 169,248,321,292,261,229,327,309,304,268,287,311,26 3,205,224,149,145,68,1
(A ): 338,381,480,471,504,507,703,753,759,718,667,671,61 2,506,523,486,355,268,10
(B ): 252,204,184,203,155,139,191,199,222,233,256,231,27 9,237,211,171,195,85,0
%Mx(A): 59.9,70.4,70.8,66.6,57.8,50.7,55.2,49.9,49.1,44.8, 50.4,54.1,51.1,46.5,46.8,34.2,46.6,29.1,14.2
%B: 42.7,34.8,27.7,30.1,23.5,21.5,21.3,20.9,22.6,24.5, 27.7,25.6,31.3,31.8,28.7,26,35.4,24,0

North America: 3 countries
(H1): 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0
(H3): 14,2,2,2,1,1,3,6,4,2,2,6,5,7,3,4,1,3,0
(Mx): 4,3,1,5,0,2,2,0,0,0,3,0,2,0,1,0,0,0,0
(A ): 29,12,7,14,1,5,8,6,4,6,10,12,12,12,12,11,12,11,0
(B ): 33,17,8,3,3,2,5,3,5,1,2,2,3,5,1,0,0,1,0
%Mx(A): 22.2,60,33.3,71.4,0,66.6,40,0,0,0,60,0,28.5,0,25,0 ,0,0,-
%B: 53.2,58.6,53.3,17.6,75,28.5,38.4,33.3,55.5,14.2,16 .6,14.2,20,29.4,7.6,0,0,8.3,-

Middle America: 9 countries
(H1): 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0
(H3): 1,0,5,3,6,2,4,5,20,11,29,24,38,34,39,43,20,1,0
(Mx): 4,0,7,7,13,8,9,15,9,3,5,2,5,5,8,2,2,3,0
(A ): 5,0,12,10,19,10,13,20,31,14,36,26,43,39,47,45,22,4 ,0
(B ): 12,6,18,15,7,4,4,1,0,5,6,7,4,1,1,2,0,0,0
%Mx(A): 80,-,58.3,70,68.4,80,69.2,75,31,21.4,14.7,7.6,11.6,12. 8,17,4.4,9,75,-
%B: 70.5,100,60,60,26.9,28.5,23.5,4.7,0,26.3,14.2,21.2 ,8.5,2.5,2,4.2,0,0,-

South America: 10 countries
(H1): 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0
(H3): 32,43,43,52,40,52,68,105,122,86,72,68,45,24,53,32, 10,3,0
(Mx): 43,42,57,77,77,67,103,125,129,142,136,143,97,72,78 ,42,62,0,0
(A ): 81,95,108,142,148,143,256,341,350,307,269,261,189, 102,138,81,72,3,0
(B ): 7,4,17,6,3,4,2,6,8,9,6,8,14,2,1,0,0,0,0
%Mx(A): 57.3,49.4,57,59.6,65.8,56.3,60.2,54.3,51.3,62.2,65 .3,67.7,68.3,75,59.5,56.7,86.1,0,-
%B: 7.9,4,13.6,4,1.9,2.7,.7,1.7,2.2,2.8,2.1,2.9,6.8,1. 9,.7,0,0,0,-

Europe: 31 countries
(H1): 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0
(H3): 1,2,1,1,0,1,0,1,3,2,5,0,1,0,1,0,3,0,0
(Mx): 3,1,1,3,1,1,0,0,0,1,2,0,3,0,0,0,0,0,0
(A ): 9,4,3,4,3,8,6,3,4,4,8,3,6,1,3,0,4,1,0
(B ): 2,6,2,3,0,1,0,2,2,0,3,4,3,1,1,0,4,0,0
%Mx(A): 75,33.3,50,75,100,50,-,0,0,33.3,28.5,-,75,-,0,-,0,-,-
%B: 18.1,60,40,42.8,0,11.1,0,40,33.3,0,27.2,57.1,33.3, 50,25,-,50,0,-

West Asia: 1 countries
(H1): 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0
(H3): 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5
(Mx): 0,0,0,3,0,1,1,2,1,0,2,0,0,0,0,0,0,0,1
(A ): 0,1,1,7,0,2,5,5,19,12,14,4,5,5,2,4,3,5,9
(B ): 4,0,0,0,1,1,0,0,0,0,0,0,0,0,0,0,0,0,0
%Mx(A): -,-,-,100,-,100,100,100,100,-,100,-,-,-,-,-,-,-,16.6
%B: 100,0,0,0,100,33.3,0,0,0,0,0,0,0,0,0,0,0,0,0

East Asia: 16 countries
(H1): 0,0,0,0,0,0,1,0,0,0,0,0,0,0,0,0,0,0,0
(H3): 29,36,40,59,93,126,137,149,127,164,138,113,105,100 ,100,149,58,91,1
(Mx): 25,21,28,18,23,18,93,37,54,33,33,47,44,33,59,44,24 ,1,0
(A ): 59,62,74,84,127,154,232,190,183,201,174,173,155,13 9,163,199,88,95,1
(B ): 148,120,77,84,66,74,89,84,99,121,137,117,138,117,1 29,104,115,34,0
%Mx(A): 46.2,36.8,41.1,23.3,19.8,12.5,40.2,19.8,29.8,16.7, 19.2,29.3,29.5,24.8,37.1,22.7,29.2,1,0
%B: 71.4,65.9,50.9,50,34.1,32.4,27.7,30.6,35.1,37.5,44 ,40.3,47,45.7,44.1,34.3,56.6,26.3,0

North Africa: 3 countries
(H1): 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0
(H3): 0,0,0,0,0,0,0,0,0,0,1,2,0,0,3,2,1,0,0
(Mx): 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0
(A ): 0,3,1,1,0,0,0,0,0,1,1,2,0,0,3,2,1,0,0
(B ): 0,0,0,0,0,0,0,0,0,0,0,1,0,0,1,0,3,0,0
%Mx(A): -,-,-,-,-,-,-,-,-,-,0,0,-,-,0,0,0,-,-
%B: -,0,0,0,-,-,-,-,-,0,0,33.3,-,-,25,0,75,-,-

South and Middle Africa: 21 countries
(H1): 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0
(H3): 27,15,29,23,35,24,46,30,16,39,9,20,22,18,14,16,9,1 7,0
(Mx): 88,173,220,169,135,107,90,67,49,28,35,25,20,24,16, 11,5,7,0
(A ): 139,189,253,192,173,134,138,100,66,68,44,47,45,45, 32,27,14,25,0
(B ): 34,34,50,72,51,21,51,46,36,33,53,39,58,54,37,29,36 ,19,0
%Mx(A): 76.5,92,88.3,88,79.4,81.6,66.1,69,75.3,41.7,79.5,5 5.5,47.6,57.1,53.3,40.7,35.7,29.1,-
%B: 19.6,15.2,16.5,27.2,22.7,13.5,26.9,31.5,35.2,32.6, 54.6,45.3,56.3,54.5,53.6,51.7,72,43.1,-

Ozeania: 6 countries
(H1): 0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0
(H3): 9,6,12,6,15,16,6,14,23,26,26,30,35,52,41,40,64,50, 0
(Mx): 2,8,7,10,12,25,29,63,62,61,71,94,92,71,62,50,52,57 ,0
(A ): 16,15,21,17,33,51,45,88,102,105,111,143,157,163,12 3,117,139,124,0
(B ): 12,17,12,20,24,32,40,57,72,64,49,53,59,57,40,36,37 ,31,0
%Mx(A): 18.1,57.1,36.8,62.5,44.4,60.9,82.8,81.8,72.9,70.1, 73.1,75.8,72.4,57.7,60.1,55.5,44.8,53.2,-
%B: 42.8,53.1,36.3,54,42.1,38.5,47,39.3,41.3,37.8,30.6 ,27,27.3,25.9,24.5,23.5,21,20,-

[gsgs]

Re: Cocirculation of Influenza Viruses

2011,weeks 1..29:

(H1): 0,0,0,0,0,0,0,0,0,0,3,0,3,4,2,0,0,0,0,0,0,0,0,0,0,0,1,10,0,0 
(H3): 1239,1175,1283,1060,1074,915,792,867,1745,1445,1012,719,542,412,343,223,160,98,80,86,104,86,115,126,159,170,158,183,64,0 
(Mx): 5528,6984,5653,6675,4977,3248,2302,3010,3193,2821,2210,1196,774,382,281,155,122,67,91,121,167,229,307,265,216,155,168,142,45,0 
(A ): 6259,5313,6434,6267,5335,4210,3191,4839,3613,3329,2591,2472,1743,1076,799,483,395,216,217,248,330,360,455,444,425,365,338,357,123,0 
(B ): 2823,3211,3500,3946,3319,3323,2754,2465,3112,2661,2332,1749,1460,1211,993,730,569,361,325,277,243,179,158,190,136,121,144,138,104,1 
%Mx(A): 81.6,85.5,81.5,86.2,82.2,78.0,74.4,77.6,64.6,66.1,68.5,62.4,58.6,47.8,44.8,41,43.2,40.6,53.2,58.4,61.6,72.6,72.7,67.7,57.6,47.6,51.3,42.3,41.2,00.0
%B:     31.0,37.6,35.2,38.6,38.3,44.1,46.3,33.7,46.2,44.4,47.3,41.4,45.5,52.9,55.4,60.1,59,62.5,59.9,52.7,42.4,33.2,25.7,29.9,24.2,24.8,29.8,27.8,45.8,99.9

H3 is now slowly overcoming Mx again worldwide
India:H3 since week 23
Chile:Mx,B
Brasil:H3
Australia:H3 and Mx
New Zealand:B
South Africa:Mx
Tanzania:Mx
Singapore:H3
Madagaskar:H1
Kenya:H3
Domin.:Mx
Cuba:H3
Cameroon:B
Cambodia:Mx,B
BanglaDesh:H3


10 old H1 in week 27 in Vietnam

-------update 2011/08/06, weeks 27..31-----------
almost exactly 1/3 for each of the 3 (H3,Mx,B)
H1:1,0,0,0,0
H3: (183)222,250,157,123,2
Mx: (142)221,172,160,133,0
A: (357)555,600,394,272,2
B: (148)168,174,175,138,1
Australia:H1
Argentina:H3
Bangla Desh:H3
Brazil:H3
Cambodia:B
Cameroon:B
(Canada:H3)
Chile:H1
China:B
(Ghana:H1,H3,B)
India:H3
(Kenya:H1,H3)
(Madagascar:H1,H3,B)
New Zealand:B
Singapore:H3
South Africa:Mx
Thailand:H3
Vietnam:Mx
-----------------------------------------------------------------

[gsgs]

Re: Cocirculation of Influenza Viruses

2011, weeks 1..24

(H1): 0,0,0,0,0,0,0,0,0,0,3,0,3,4,2,0,0,0,0,0,0,0,0,0
(H3): 2392,2360,2692,2529,2494,2357,2306,2072,1738,1428,996,711,525,405,339,216,151,87,69,50,57,34,39,25 
(Mx): 5526,6983,8397,9374,8800,8974,7824,5398,4574,2798,2197,1190,772,382,270,148,118,57,79,110,122,162,104,25 
(A ): 11830,12861,14005,14712,14059,13904,12849,9458,7715,5247,3937,2455,1714,1067,786,470,382,194,191,194,217,208,152,57 
(B ): 2824,3210,3499,3945,4438,4485,4125,3651,3109,2625,2294,1710,1430,1183,980,723,557,341,308,262,194,141,125,94 
%Mx(A): 69.7,74.7,75.7,78.7,77.9,79.1,77.2,72.2,72.4,66.2,68.7,62.5,59.3,48.2,44.1,40.6,43.8,39.5,53.3,68.7,68.1,82.6,72.7,50
%B: 19.2,19.9,19.9,21.1,23.9,24.3,24.3,27.8,28.7,33.3,36.8,41,45.4,52.5,55.4,60.6,59.3,63.7,61.7,57.4,47.2,40.4,45.1,62.2

5 old H1 in Mauritius (East of Madagascar)

flu survives summer in Mauritius ?

[gsgs]

Re: Cocirculation of Influenza Viruses

2011/05/04 , weeks 1..17 , 2011
(H1): 0,0,0,0,0,0,0,0,0,0,3,0,0,0,2,1,0
(H3): 2207,2218,2551,2451,2444,2309,2236,2026,1678,1373, 971,648,485,332,232,83,7
(Mx): 4912,6579,8207,9222,8650,8940,7757,5304,4480,2826, 2190,1134,732,348,187,94,8
(A ): 9907,11871,13381,14358,13718,13714,12581,9218,7517 ,5193,3884,2314,1607,941,553,239,21
(B ): 2343,2886,3208,3680,4204,4289,3908,3473,2980,2551, 2225,1628,1327,1090,848,374,33
%Mx(A): 68.9,74.7,76.2,79,77.9,79.4,77.6,72.3,72.7,67.3,69 .2,63.6,60.1,51.1,44.4,52.8,53.3
%B: 19.1,19.5,19.3,20.4,23.4,23.8,23.7,27.3,28.3,32.9, 36.4,41.2,45.2,53.6,60.5,61,61.1


still 6 old seasonal H1N1 ! (3 in China, 1 in India , 2 in Indonesia)
{and it may survive in swine, i.e. H1N2}

Mexico:
(H3):58,34,30,18,12,7,7,2,3,0,1,3,2,1,1,0
(Mx):3,1,0,1,0,4,3,2,8,3,13,19,47,14,10,1
(B):26,40,28,22,12,19,13,10,20,7,5,9,13,3,4,0