Re: Japan - Whooper Swan and duck infected with H5N1 in Hokkaido prefecture
H5N1 Japan 2011/02 2200 Influenza A virus (A/peregrine falcon/Tochigi/15/2011(H5N1)) yes
AB617579 Avian 4 H5N1 Japan 2011/02 1742 Influenza A virus (A/peregrine falcon/Tochigi/15/2011(H5N1)) yes
AB617580 Avian 5 H5N1
full genome at genbank !
now, what birds with H5N1 do Japanese peregrine falcons
in Tochigi hunt ?
differences in promille in the 8 segments:
so the common ancestor of the duck and the falcon virus (65 differences) is ~0.8 years = 10 months ago
(spring 2010, breeding ?)
H5N1 Japan 2011/02 2200 Influenza A virus (A/peregrine falcon/Tochigi/15/2011(H5N1)) yes
AB617579 Avian 4 H5N1 Japan 2011/02 1742 Influenza A virus (A/peregrine falcon/Tochigi/15/2011(H5N1)) yes
AB617580 Avian 5 H5N1
full genome at genbank !
now, what birds with H5N1 do Japanese peregrine falcons
in Tochigi hunt ?
differences in promille in the 8 segments:
Code:
1 >A/whooper swan/Hokkaido/4/2011(H5N1/01// 2308 2299 2200 1743 1497 1363 992 840 1: 0, 0, 0, 0, 0, 0, 0, 0 A/whooper swan/Hokkaido/4/2011(H5N1/01// 2308 2299 2200 1743 1497 1363 992 840 2: 1, 2, 0, 2, 2, 0, 1, 0 A/duck/Fukushima/2/2011(H5N1/// 2308 2309 2200 1742 1529 1363 992 840 3: 4, 8, 4, 5, 6, 8, 4, 1 A/peregrine falcon/Tochigi/15/2011(H5N1/02// 2306 2299 2200 1742 1530 1362 992 840 2 >A/duck/Fukushima/2/2011(H5N1/// 2308 2309 2200 1742 1529 1363 992 840 1: 1, 2, 0, 2, 2, 0, 1, 0 A/whooper swan/Hokkaido/4/2011(H5N1/01// 2308 2299 2200 1743 1497 1363 992 840 2: 0, 0, 0, 0, 0, 0, 0, 0 A/duck/Fukushima/2/2011(H5N1/// 2308 2309 2200 1742 1529 1363 992 840 3: 3, 6, 4, 5, 5, 8, 3, 1 A/peregrine falcon/Tochigi/15/2011(H5N1/02// 2306 2299 2200 1742 1530 1362 992 840 3 >A/peregrine falcon/Tochigi/15/2011(H5N1/02// 2306 2299 2200 1742 1530 1362 992 840 1: 4, 8, 4, 5, 6, 8, 4, 1 A/whooper swan/Hokkaido/4/2011(H5N1/01// 2308 2299 2200 1743 1497 1363 992 840 2: 3, 6, 4, 5, 5, 8, 3, 1 A/duck/Fukushima/2/2011(H5N1/// 2308 2309 2200 1742 1529 1363 992 840 3: 0, 0, 0, 0, 0, 0, 0, 0 A/peregrine falcon/Tochigi/15/2011(H5N1/02// 2306 2299 2200 1742 1530 1362 992 840
so the common ancestor of the duck and the falcon virus (65 differences) is ~0.8 years = 10 months ago
(spring 2010, breeding ?)
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